Lag0036880 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0036880
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	tRNA-processing ribonuclease BN
Location	chr2: 1841585 .. 1847389 (-)
RNA-Seq Expression	Lag0036880
Synteny	Lag0036880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCATTCCGATTTCTTTATGGTACGATGGTGTGTGGGATAGTTGCTATCAATACACTGGATTCAAGACGTCAACAATGTGCGTAGATTCTAATTGTACATTCGAACAACTCGTCAATTGCATTGATAGTAAGCTCTCATCTCATAATAGTGGGAAAATTCACTGTATCTCTTTGTACAACAACATCTCTGGTAAGCCACTGTACTTAGGCTTTGTGAGGATAGAGACGTTGCCTGGTTCTTGTTTTCTATATCCAACAGCAACATCAATGAATTTAGCATCATAGTGGATTTTGTCCAGCGTGAGTCTACAAATACAATGTGTATGCAACAGAATCCAGATACGTCTCTCATTATCTCCCAGAAAAAACAAAAAATGAAGTTCATTGATTCCACTGAAATTGATTCCTTAGCAGTAAATCTACGGGTTTCCACGCGCGCTGGCAAATTCAAACGGGTTTCCCTCGAGAGAACTTGAAGGGTCTTCCTTTTTTTTGAAAATGGATAGAATGCGCTTGGTCTTTGTGAGGGTTTCCAAGTGGAGAATGGCAAGAGTTTATCTTGAATGGTATTTGTGAGGCCTTTTTATTTGCTTTTATGGATTTTATGAAATTAGATCCATGCGTTGGTATGATTTTTGCTTCTTTGAGGGTTTCATTTACAGTGTTATCATTAATTCTGGAGTCTTCTTTCTTATGGTTACCAAATATTATCAATTACATCTTATTTTTTGACCCAATTTGTGTGATGCATGAGGTTGTTCTTCAGTTCAATGGGGTAAGTTCTTTTAAGTGTGTCTTAATTTTTTGATTCAATTCAATATATTGCGTTTAAATTTTGAGTTGTCCTATTTTTTCTCCCGTTTGAATTTGAATCTGTTGTTTCAATTTTAATTCTCCAAATTTAATGGTTTTATTTGTAGGTTTGTTATTGATTTGGTTATTGAATTAATACGTAACAATCCTAGATTTCATCCCTCCTTTATAGGGTATTTTAATTTAAGTTATTTATGAATTAAGATTTGGGTGGGGTATTTGTGTCCTATCGGTTGCCAAAAACATTTACTAAATTTAGCTTTTGGCCATATCCCAAAATAAAAATACAAATGGCTCTTTTTCAAATCACCTATTTTAAAATGGCCATGGCCATTTAGCTGGTTGCCCAAAAAAAAAACAAACAAAACAAAAAGAAGTGGGCCGAAAGCTTGAAGAAGAAGAAGGAATGGAGTCCATTGGGCCGAAGTTTTCCATAGCGAAGCCCACCTATCAGGGGTAGTTTCGTCTTTGAATATAAGAAGGAATCGGGACGGGGGCCGTAAGCCCTAGCCGCCAAGCGTCCTTGTGGCTATAAGTACTGAAGGGAGTGACCATCACTTCATCAATCTCTCTTCGACCGATTCTACGCCGCGGGTTCTAATTTCTTTGAATTTTCGTGAGCAGATCTCTCGACTCGGTGAGACTTTGTCCTTCTATAGAATTTGGATTCTGTTTCTTTTCTGAATAACAATTTTTGTTTGTGAAAACTTTGAAGAATGTAGAGGTTTTTTCTCTGTGATGATGAACAATGATGACGAGTCCGATCTCTAATCCATTCTCCCTTGACGACAAAACGAGGCATTTGTCTGAGAGAAATCAAACCTCTTTTCTTTTTTTATTATAGCATTTCTTATGTGTAGATATAGATGAGGCAGGTGCCATAATATCTGTTTTTAAAAATACTTGTATGGAATTTAAAAACAAACATATTCATACCATTGATCATATTGAATGATCCGTATCATTTCCCTTTTTTCACAAGATTCATATATAGAAACAAGAACATTGACGATTGAAATCCATTGCCAATAAATGTATGTCTTTTATCGATGGAGTTATGCATTTAGATTTACCATTAAGGTTTTACTTCTTGATATATTGTTAACTACGATTGTTCATCCTGTAATATTTGGCTTTTAAGAGAAGGAAACATCTTCTGCCGATTTGAGAAAGGCGATCTCCCTGTTCTTCTTCTCGAATTTCTGCAAGTTCAAGACTTAGGGTTTCTCTCTTTTTTCTTGATTAAATTTAGTATGTAGTTTTTCCTAATGTGGAGGTTTTTTCTCTGTGATGATGAACAATGATGACGAGTCCGATCTCTAATCCATTCACCCGTGACGACAAATCGAGGCATTTGTCTGAGAGAAATCAAACCTCCTTATCTTTGATTTGTCTAATTTTCTTTTGTGTTAAGATTCGCATTTTTTCTTCCTCGTTTTCGCCGATGAAGCAGAATTGGAGAACAGGAGGAACCTAATCTGCTTTCCTTTGGTCGATTCTGATCAAATGCTTTATGTGATTTTTACGATTTTTGTGGGCTTAGTTTTTTATGAAGATTATCTTTCCATTTGGTTTTCAATCTTCACCTAATTTTTTGCACAGGGATGATTTCGATTAGATTGAAACTGGGTTTATATGGTATTGTGGCATAAGCACAAGTGCGGCGATGATGAGAATACATACTCTGGTTTAATTGAAACTGAGATTGTTTCCGTGATTATTTCTCAAGCACTTTTGAGCCGTTTGTGGGAATACTAATATTAATCTATCTTCTAAACATTAGCTGCGAAGTTTTTAATTCATGTCATTTTTTCATCATGTTCAACCCGATTTATTTAACTGCGGAATTTGTAAGCTGAATTTGCTTGCACCGATTGAACTTCTCGGAGATTTCCATGTCAGTAAAGCAGGAAAGTTGATAATGTACATGATTTTCTTGTGGTCTCTTGGAAGTGTCAACCTACGGGAGATTTTTCTTAATTGCCAGAGCATGGAACTGGGTTTATGTAGTTTGGATCAGTGAAATATTTTCACCGCATGGCCGTCTACTACTAACTGGAGAACTGTAATTTGTAATTAAACGATTGGTAGTGGCTATATTGCCCATTCAAAAATCAAATCTTTACAAGGTTATATTGAATTTGAACAAAGATTTGGCCATGCATTAAAACTGCAATCATTGGCTGAGCTGGCGATCTCTTTTAGCATTAAGGTTTCACGCTTCTTGAAATTCCCTTTCTGTCTCAATTATCTTCTGCACGATGCACCCCGGGCTACTCTGATTATCTCCATGACGGTGATAGCCCCATTGCTCGTGCTAGAGTGTCGCCGTTTAGTGTTGCAGGTTAGCATTGCCTTTTCCCACGGTTGATCTGTGTCAAAATAACGGCGAAATCCCTTTATCATGGTTACAACGCTACTATATATTGTTGAATGTTGGATTTTGTTTTTGTTTCGTTTAATTTTATTTTTGGGGCCTCACTACACCTTTAGCTTGTTTTCTGCAGATAAGAATGTGAAAATAAAGCTAGTCATAGTGGCCGAAATTTAATCTTCGGCGGTGTTCACGTGGGGGCTTGTCCATTCAATGTTTGTGCCTCTAAAAACTTCCGCTATAGATCTTCTAATAACAATTTGAATATTGTATTCTGAAATTTTGTTTTCAAGATTTTTTTAAAAAGTTTTTACTACAAAGTTTTGTTTTTTAGAAAGATTGGTTGGCTATGATGATTACATATTATCCGCGCTTCCGAGTTTAAACGATGAAGCAAGCTTAAAATAAATGGTTGAATTTCTTAATATGAGTCATCTTTCTTCTATCGTAGTTTTGTAAATTGTGGAGTTTATACGTTATTATTTCTAAGTTTGGCAGTGATTATTAAACTTCAGCTTATAATGCCAGTTCTGCTTCAGAATTTGATGATTGATAAAGCTGTTACAAATGATCTGAGCCTTCAACTTTACAGGTTTCGTGAACTTTATGTTCTCAGAATGCAGTTTTCTTACCTGAGAGATTTTCTAATACAGTTGTTCGGCCTATTTGCATTTGCATATCGATTTATCTCTATTTTCTATTGAGTTGTTAAATTTGTTCTTTTGGAGTTTTATATTATTAAGTAACCACTACATACATGGTATAGTTTGGAAGTCGTGTTTTTGACTCTGAATTAATTTTTTTATAATGATTTAATTTTGCCAATGATGACTCAATCCAGCTTGTTTAAGACTTTGTGGAGCCAAGTCCCTGTTTCAGGGAGAACCTACTTGGTGAAGCAATATTCACTTGATATTATTGGATTTAACTGAGGCCTTTGGCCATAGAAACGTTCTAACTTTGCATTATTCTTCTTCTGGCACTAGTTAATTTGATTAATTATATGTTCATTTCATGTTCACATCATGAACAATTTTAGACACATTAGCTATGGTCTTTTTGTAGTTTGTACAATATGTAGGATTTTTTTTCTTGTTTTAAAATTGAAATTTTGTAATCGAATTGAAACCTGTTTGAATCAATCCAACGTATCTGAGATGTTGTGAGGCCAAGTCCCTGTTTCAGGGAGAACCTACTTGGTGGAGCAGCATTTAATATGAGTTATACGGATTTATCTGTGTCATATTTAGGTTAGCTGAAGATTAATATTATTATGTGATTGCATTCTACAATGTTGATGACTTGAATATCTAATTGTGTTTAGCATGTTCCATTGTTGAGTTTAACTATACCTTTCCCTAGTCCTATTTGGGGTCTGGAGTCTGAAAAACTCAGAAATTGTGTGTTGTCATCAGCTTCTTCTCGCCACCACTAGGGAGACTGGAGTTAAATAACAGCACTAAATACTCTTAAATTGCTACGTTTTAAAGAAGTTGAGATGAACATTAAATTTAAACTCTCAAGGTCGATTAAAATTGTGGTAAAGTTTAGGATATGAATGTATGAAACTTATTTGTACTTATTTTCTGCAGATGGCAACTCCCTTTGGTGTGTTTGATCAGAATCTGAAGCCCGGAAATCAGAAGATTGGCAGGTTTATTTTGGGTAGTGTTCGCTTGTCGTTTTAGAACTCCCTCGCGAATACAACTCCTATGCCCGAAGCATTTTTACGGGCTTAGGGTTTAAGGACCAGTTGCTCTGCTCTAAACCCTTAAAATATGCAGTCGCAATCGTTCTGTCTTGGGCTTCCCTCGGCATTGCTCGGATTACAGGATGGTCGTGCTCGCTTTCATCAAATGGTCAATACTTGTTACTAATATTTAATTTTATGATTGTTCTGTCACTTGGATCTAACGTTATAGATTTTCTCTTCATTTATTCTCAAGCAATTGGAAAGTCGAGTTGGACAGAGGAGACAAGGATTACATTTTGCATTTGCGTCGAAATGTATGTTTTCAATTCGTTGCCATTGTTTTTCTTGTGTGTGTGTGTTTATGACTTTTTACAAATTGAAACAACTTGCAGGTTTATAGACTTTATCAGCTAACAAAAGCTGCACATTTTATGGAGAGGTTGATGTTCCAAATGAGAGGGCTTCCCACCACTCCGGACTTGTTGGAAAAAAGTGGAGCTCTTTTTGCTATGATGATAACCTTTCAAGTTCTAGGGGTGGTATGCCTCTGGTCGTTAATGACTTTTCTCTCGAGGCTTTTTCCTTCCAGACCTGTATCAGAGAACTACTATTGTTGTTACATTTTGTACCTTCTATTTTTAGGGTTGGTTTACTCCTAAATACAATTTATTTTTGCAAGTAGTTATAGAACATATATCATCATTTGTTCATTGAGATCCACATTGTCGTACCCCATCAATCAATATTCAATTTAATAATTGTCAAAAAAAAATATTCAATTTACTCGACATTCATTTGTCCATCATATCTCTCGTTTACAGAAAATGATATATTTATTAGTCTATCAATCCTAAGCTTCATTCATTGTTTATGTTTCAATGTTTCTTTTACTTAGGAGTTTGTTCTAATCTTTGGTTAG

mRNA sequence

ATGTCTTCCATTCCGATTTCTTTATGGTACGATGGTGTGTGGGATAGTTGCTATCAATACACTGGATTCAAGACGTCAACAATGTGCGTAGATTCTAATTGTACATTCGAACAACTCGTCAATTGCATTGATAGTAAGCTCTCATCTCATAATAGTGGGAAAATTCACTGTATCTCTTTGTACAACAACATCTCTGGTAAGCCACTGTACTTAGGCTTTGTGAGGATAGAGACGTTGCCTGATTCGCATTTTTTCTTCCTCGTTTTCGCCGATGAAGCAGAATTGGAGAACAGGAGGAACCTAATCTGCTTTCCTTTGGTCGATTCTGATCAAATGCTTTATCACAAGTGCGGCGATGATGAGAATACATACTCTGGTTTAATTGAAACTGAGATTGTTTCCGTGATTATTTCTCAAGCACTTTTGAGCCGTTTCACGCTTCTTGAAATTCCCTTTCTGTCTCAATTATCTTCTGCACGATGCACCCCGGGCTACTCTGATTATCTCCATGACGGTGATAGCCCCATTGCTCGTGCTAGAGTGTCGCCGTTTAGTGTTGCAGTGATTATTAAACTTCAGCTTATAATGCCAGTTCTGCTTCAGAATTTGATGATTGATAAAGCTGTTACAAATGATCTGAGCCTTCAACTTTACAGCTTGTTTAAGACTTTGTGGAGCCAAGTCCCTGTTTCAGGGAGAACCTACTTGATGGCAACTCCCTTTGGTGTGTTTGATCAGAATCTGAAGCCCGGAAATCAGAAGATTGGCAGTCGCAATCGTTCTGTCTTGGGCTTCCCTCGGCATTGCTCGGATTACAGGATGGTCGTGCTCGCTTTCATCAAATGCAATTGGAAAGTCGAGTTGGACAGAGGAGACAAGGATTACATTTTGCATTTGCGTCGAAATGTTTATAGACTTTATCAGCTAACAAAAGCTGCACATTTTATGGAGAGGTTGATGTTCCAAATGAGAGGGCTTCCCACCACTCCGGACTTGTTGGAAAAAAGTGGAGCTCTTTTTGCTATGATGATAACCTTTCAAGTTCTAGGGGTGGAGTTTGTTCTAATCTTTGGTTAG

Coding sequence (CDS)

ATGTCTTCCATTCCGATTTCTTTATGGTACGATGGTGTGTGGGATAGTTGCTATCAATACACTGGATTCAAGACGTCAACAATGTGCGTAGATTCTAATTGTACATTCGAACAACTCGTCAATTGCATTGATAGTAAGCTCTCATCTCATAATAGTGGGAAAATTCACTGTATCTCTTTGTACAACAACATCTCTGGTAAGCCACTGTACTTAGGCTTTGTGAGGATAGAGACGTTGCCTGATTCGCATTTTTTCTTCCTCGTTTTCGCCGATGAAGCAGAATTGGAGAACAGGAGGAACCTAATCTGCTTTCCTTTGGTCGATTCTGATCAAATGCTTTATCACAAGTGCGGCGATGATGAGAATACATACTCTGGTTTAATTGAAACTGAGATTGTTTCCGTGATTATTTCTCAAGCACTTTTGAGCCGTTTCACGCTTCTTGAAATTCCCTTTCTGTCTCAATTATCTTCTGCACGATGCACCCCGGGCTACTCTGATTATCTCCATGACGGTGATAGCCCCATTGCTCGTGCTAGAGTGTCGCCGTTTAGTGTTGCAGTGATTATTAAACTTCAGCTTATAATGCCAGTTCTGCTTCAGAATTTGATGATTGATAAAGCTGTTACAAATGATCTGAGCCTTCAACTTTACAGCTTGTTTAAGACTTTGTGGAGCCAAGTCCCTGTTTCAGGGAGAACCTACTTGATGGCAACTCCCTTTGGTGTGTTTGATCAGAATCTGAAGCCCGGAAATCAGAAGATTGGCAGTCGCAATCGTTCTGTCTTGGGCTTCCCTCGGCATTGCTCGGATTACAGGATGGTCGTGCTCGCTTTCATCAAATGCAATTGGAAAGTCGAGTTGGACAGAGGAGACAAGGATTACATTTTGCATTTGCGTCGAAATGTTTATAGACTTTATCAGCTAACAAAAGCTGCACATTTTATGGAGAGGTTGATGTTCCAAATGAGAGGGCTTCCCACCACTCCGGACTTGTTGGAAAAAAGTGGAGCTCTTTTTGCTATGATGATAACCTTTCAAGTTCTAGGGGTGGAGTTTGTTCTAATCTTTGGTTAG

Protein sequence

MSSIPISLWYDGVWDSCYQYTGFKTSTMCVDSNCTFEQLVNCIDSKLSSHNSGKIHCISLYNNISGKPLYLGFVRIETLPDSHFFFLVFADEAELENRRNLICFPLVDSDQMLYHKCGDDENTYSGLIETEIVSVIISQALLSRFTLLEIPFLSQLSSARCTPGYSDYLHDGDSPIARARVSPFSVAVIIKLQLIMPVLLQNLMIDKAVTNDLSLQLYSLFKTLWSQVPVSGRTYLMATPFGVFDQNLKPGNQKIGSRNRSVLGFPRHCSDYRMVVLAFIKCNWKVELDRGDKDYILHLRRNVYRLYQLTKAAHFMERLMFQMRGLPTTPDLLEKSGALFAMMITFQVLGVEFVLIFG

Homology

[Close]

BLAST of Lag0036880 vs. NCBI nr
Match: XP_038905249.1 (uncharacterized protein LOC120091332 [Benincasa hispida])

HSP 1 Score: 103.2 bits (256), Expect = 4.7e-18
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 262 VLGFPRHCSDYRMVVLAFIKCNWKVELD-RGDKDY-ILHLRRNVYRLYQLTKAAHFMERL 321
           ++G P   + +  +V   ++  ++  LD RG   + ++ +   VYRLYQLTKAAHFMERL
Sbjct: 231 MIGLPALVAVFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMERL 290

Query: 322 MFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           MFQMRGLPTTPDLLEKSGALFAMMITFQVLGV
Sbjct: 291 MFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 322

[Close]

BLAST of Lag0036880 vs. NCBI nr
Match: XP_022138611.1 (uncharacterized protein LOC111009450 [Momordica charantia])

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-16
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 262 VLGFPRHCSDYRMVVLAFIKCNWKVELD-RGDKDY-ILHLRRNVYRLYQLTKAAHFMERL 321
           ++G P   +    +V   ++  ++  LD RG   + ++ +   VYRLYQLTKAAHFMERL
Sbjct: 233 MIGLPALVAVVPFLVGCIVQLAFETHLDRRGSSSWPLVPIIFEVYRLYQLTKAAHFMERL 292

Query: 322 MFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           +FQMRGLPTTP+LLEKSGALFAMM+TFQVLGV
Sbjct: 293 IFQMRGLPTTPELLEKSGALFAMMVTFQVLGV 324

[Close]

BLAST of Lag0036880 vs. NCBI nr
Match: XP_008466634.1 (PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo])

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-16
Identity = 52/92 (56.52%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 262 VLGFPRHCSDYRMVVLAFIKCNWKVELD-RGDKDY-ILHLRRNVYRLYQLTKAAHFMERL 321
           ++G P   + +  +V   ++  ++  LD RG   + ++ +   VYRLYQLTKAAHFME L
Sbjct: 231 MIGLPALVAVFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMESL 290

Query: 322 MFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           MFQMRGLPT+P+LLEKSGALFAMMITFQ+LGV
Sbjct: 291 MFQMRGLPTSPELLEKSGALFAMMITFQILGV 322

[Close]

BLAST of Lag0036880 vs. NCBI nr
Match: TYK31605.1 (TRNA-processing ribonuclease BN [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-16
Identity = 52/92 (56.52%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 262 VLGFPRHCSDYRMVVLAFIKCNWKVELD-RGDKDY-ILHLRRNVYRLYQLTKAAHFMERL 321
           ++G P   + +  +V   ++  ++  LD RG   + ++ +   VYRLYQLTKAAHFME L
Sbjct: 231 MIGLPALVAVFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMESL 290

Query: 322 MFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           MFQMRGLPT+P+LLEKSGALFAMMITFQ+LGV
Sbjct: 291 MFQMRGLPTSPELLEKSGALFAMMITFQILGV 322

[Close]

BLAST of Lag0036880 vs. NCBI nr
Match: KAA0051699.1 (uncharacterized protein E6C27_scaffold60G00840 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 7.5e-16
Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 262 VLGFPRHCSDYRMVVLAFIKCNWKVELD-RGDKDYIL--HLRRNVYRLYQLTKAAHFMER 321
           ++G P   + +  +V   ++  ++  LD RG   + L   +   VYRLYQLTKAAHFME 
Sbjct: 232 MIGLPALVAVFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVVYRLYQLTKAAHFMES 291

Query: 322 LMFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           LMFQMRGLPT+P+LLEKSGALFAMMITFQ+LGV
Sbjct: 292 LMFQMRGLPTSPELLEKSGALFAMMITFQILGV 324

[Close]

BLAST of Lag0036880 vs. ExPASy TrEMBL
Match: A0A6J1CA74 (uncharacterized protein LOC111009450 OS=Momordica charantia OX=3673 GN=LOC111009450 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.6e-17
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 262 VLGFPRHCSDYRMVVLAFIKCNWKVELD-RGDKDY-ILHLRRNVYRLYQLTKAAHFMERL 321
           ++G P   +    +V   ++  ++  LD RG   + ++ +   VYRLYQLTKAAHFMERL
Sbjct: 233 MIGLPALVAVVPFLVGCIVQLAFETHLDRRGSSSWPLVPIIFEVYRLYQLTKAAHFMERL 292

Query: 322 MFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           +FQMRGLPTTP+LLEKSGALFAMM+TFQVLGV
Sbjct: 293 IFQMRGLPTTPELLEKSGALFAMMVTFQVLGV 324

[Close]

BLAST of Lag0036880 vs. ExPASy TrEMBL
Match: A0A5D3E8K1 (tRNA-processing ribonuclease BN OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2376G00070 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-16
Identity = 52/92 (56.52%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 262 VLGFPRHCSDYRMVVLAFIKCNWKVELD-RGDKDY-ILHLRRNVYRLYQLTKAAHFMERL 321
           ++G P   + +  +V   ++  ++  LD RG   + ++ +   VYRLYQLTKAAHFME L
Sbjct: 231 MIGLPALVAVFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMESL 290

Query: 322 MFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           MFQMRGLPT+P+LLEKSGALFAMMITFQ+LGV
Sbjct: 291 MFQMRGLPTSPELLEKSGALFAMMITFQILGV 322

[Close]

BLAST of Lag0036880 vs. ExPASy TrEMBL
Match: A0A1S3CRR4 (uncharacterized protein LOC103503989 OS=Cucumis melo OX=3656 GN=LOC103503989 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-16
Identity = 52/92 (56.52%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 262 VLGFPRHCSDYRMVVLAFIKCNWKVELD-RGDKDY-ILHLRRNVYRLYQLTKAAHFMERL 321
           ++G P   + +  +V   ++  ++  LD RG   + ++ +   VYRLYQLTKAAHFME L
Sbjct: 231 MIGLPALVAVFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMESL 290

Query: 322 MFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           MFQMRGLPT+P+LLEKSGALFAMMITFQ+LGV
Sbjct: 291 MFQMRGLPTSPELLEKSGALFAMMITFQILGV 322

[Close]

BLAST of Lag0036880 vs. ExPASy TrEMBL
Match: A0A5A7UDY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00840 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-16
Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 262 VLGFPRHCSDYRMVVLAFIKCNWKVELD-RGDKDYIL--HLRRNVYRLYQLTKAAHFMER 321
           ++G P   + +  +V   ++  ++  LD RG   + L   +   VYRLYQLTKAAHFME 
Sbjct: 232 MIGLPALVAVFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVVYRLYQLTKAAHFMES 291

Query: 322 LMFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           LMFQMRGLPT+P+LLEKSGALFAMMITFQ+LGV
Sbjct: 292 LMFQMRGLPTSPELLEKSGALFAMMITFQILGV 324

[Close]

BLAST of Lag0036880 vs. ExPASy TrEMBL
Match: A0A6J1IHP8 (uncharacterized protein LOC111473667 OS=Cucurbita maxima OX=3661 GN=LOC111473667 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-15
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 262 VLGFPRHCSDYRMVVLAFIKCNWKVELD-RGDKDY-ILHLRRNVYRLYQLTKAAHFMERL 321
           ++G P   + +  +V   ++  ++  LD RG   + ++ +   VYRLYQLTKA+H MERL
Sbjct: 235 MIGLPALVAVFPFLVGCIVQLAFETHLDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERL 294

Query: 322 MFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           MFQMRGLP TP+LLEKSGA+F+MMITFQVLGV
Sbjct: 295 MFQMRGLPNTPELLEKSGAIFSMMITFQVLGV 326

[Close]

BLAST of Lag0036880 vs. TAIR 10
Match: AT1G48460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 2.0e-06
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 303 VYRLYQLTKAAHFMERLMFQMRGLPTTPDLLEKSGALFAMMITFQVLGV 352
           VYRLYQ+T+AA F++RLMF M+   TT ++ E+  AL  +++T Q L V
Sbjct: 269 VYRLYQVTRAATFVQRLMFMMKDAATTAEITERGVALVGLVVTLQFLAV 317

The following BLAST results are available for this feature:

BLAST of Lag0036880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905249.1	4.7e-18	60.87	uncharacterized protein LOC120091332 [Benincasa hispida]	[more]
XP_022138611.1	1.2e-16	57.61	uncharacterized protein LOC111009450 [Momordica charantia]	[more]
XP_008466634.1	2.6e-16	56.52	PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo]	[more]
TYK31605.1	2.6e-16	56.52	TRNA-processing ribonuclease BN [Cucumis melo var. makuwa]	[more]
KAA0051699.1	7.5e-16	56.99	uncharacterized protein E6C27_scaffold60G00840 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0036880 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0036880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CA74	5.6e-17	57.61	uncharacterized protein LOC111009450 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A5D3E8K1	1.3e-16	56.52	tRNA-processing ribonuclease BN OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CRR4	1.3e-16	56.52	uncharacterized protein LOC103503989 OS=Cucumis melo OX=3656 GN=LOC103503989 PE=...	[more]
A0A5A7UDY4	3.6e-16	56.99	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1IHP8	3.1e-15	54.35	uncharacterized protein LOC111473667 OS=Cucurbita maxima OX=3661 GN=LOC111473667...	[more]

BLAST of Lag0036880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48460.1	2.0e-06	48.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33918	OS01G0704200 PROTEIN	coord: 302..352
None	No IPR available	PANTHER	PTHR33918:SF4	PROTEIN, PUTATIVE-RELATED	coord: 302..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0036880.1	Lag0036880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane