Lag0036878 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0036878
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr2: 1837698 .. 1838339 (+)
RNA-Seq ExpressionLag0036878
SyntenyLag0036878
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAACTAGGCTGTCCACCTGATGAAATAACATATAGAACTTTAATTGATGAATATTGTAAAGTTGGAAATATGATAGAAGCCTTGAAATTGAAGAACATGGTTGAAAGAGAGGGAATCAGTGCTTCCACTAAAATGTACAATTCTCTTATTACTGGTGCTTTTAGATCTGAAGAATTACACAAATTGATTGGTCTTCTAGCTGAGATGAATAGCCGTGAACTATCTCCCAATGTTATAACTTATGGCTCCCTTATAGCTGGTTGGTGTGATAAGGGGATGATGGAAAAAGCGTATAGTGCATACTTTGAGATGATCGACAAAGGGATTGAACCTAATATTATTATTGGCAGCAAAATTGTCAGTAGTCTGTACCGACTGGGTAAGATTGATGAAGCAAATTTGGTCTTGCATCAAATGGCAGATATTGATCCTGTTGTAGATCATGCATATTCTATAAAATTGCCCAATTCTGGTTCAAGAGATCTTGAAACTCAGAAAATTGTGGATTATTTTGGCCAAAGGACCACGAGCATCCCTCTGTCGAACCATATTGTCTATAATGTTGCAATTGCAGGGCTGTGCAAGTCTAAGAAGGTTGATGATGGCAGAAGATTTTTGTCAGATTTGTTACTTTGA

mRNA sequence

ATGAAGGAACTAGGCTGTCCACCTGATGAAATAACATATAGAACTTTAATTGATGAATATTGTAAAGTTGGAAATATGATAGAAGCCTTGAAATTGAAGAACATGGTTGAAAGAGAGGGAATCAGTGCTTCCACTAAAATGTACAATTCTCTTATTACTGGTGCTTTTAGATCTGAAGAATTACACAAATTGATTGGTCTTCTAGCTGAGATGAATAGCCGTGAACTATCTCCCAATGTTATAACTTATGGCTCCCTTATAGCTGGTTGGTGTGATAAGGGGATGATGGAAAAAGCGTATAGTGCATACTTTGAGATGATCGACAAAGGGATTGAACCTAATATTATTATTGGCAGCAAAATTGTCAGTAGTCTGTACCGACTGGGTAAGATTGATGAAGCAAATTTGGTCTTGCATCAAATGGCAGATATTGATCCTGTTGTAGATCATGCATATTCTATAAAATTGCCCAATTCTGGTTCAAGAGATCTTGAAACTCAGAAAATTGTGGATTATTTTGGCCAAAGGACCACGAGCATCCCTCTGTCGAACCATATTGTCTATAATGTTGCAATTGCAGGGCTGTGCAAGTCTAAGAAGGTTGATGATGGCAGAAGATTTTTGTCAGATTTGTTACTTTGA

Coding sequence (CDS)

ATGAAGGAACTAGGCTGTCCACCTGATGAAATAACATATAGAACTTTAATTGATGAATATTGTAAAGTTGGAAATATGATAGAAGCCTTGAAATTGAAGAACATGGTTGAAAGAGAGGGAATCAGTGCTTCCACTAAAATGTACAATTCTCTTATTACTGGTGCTTTTAGATCTGAAGAATTACACAAATTGATTGGTCTTCTAGCTGAGATGAATAGCCGTGAACTATCTCCCAATGTTATAACTTATGGCTCCCTTATAGCTGGTTGGTGTGATAAGGGGATGATGGAAAAAGCGTATAGTGCATACTTTGAGATGATCGACAAAGGGATTGAACCTAATATTATTATTGGCAGCAAAATTGTCAGTAGTCTGTACCGACTGGGTAAGATTGATGAAGCAAATTTGGTCTTGCATCAAATGGCAGATATTGATCCTGTTGTAGATCATGCATATTCTATAAAATTGCCCAATTCTGGTTCAAGAGATCTTGAAACTCAGAAAATTGTGGATTATTTTGGCCAAAGGACCACGAGCATCCCTCTGTCGAACCATATTGTCTATAATGTTGCAATTGCAGGGCTGTGCAAGTCTAAGAAGGTTGATGATGGCAGAAGATTTTTGTCAGATTTGTTACTTTGA

Protein sequence

MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL
Homology
BLAST of Lag0036878 vs. NCBI nr
Match: XP_022140720.1 (putative pentatricopeptide repeat-containing protein At1g19290 [Momordica charantia])

HSP 1 Score: 357.8 bits (917), Expect = 6.3e-95
Identity = 180/213 (84.51%), Postives = 189/213 (88.73%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           MKELGC PDEITYRTLID YCKVGNM+EA K K++VEREGISAST MYNSLITG FRSEE
Sbjct: 532 MKELGCQPDEITYRTLIDGYCKVGNMVEAFKFKDLVEREGISASTGMYNSLITGVFRSEE 591

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           L KLIGLLAEM SRELSPNV+TYGSLIAGWCDKGMM KAYSAYFEMI KGI PNIIIGSK
Sbjct: 592 LPKLIGLLAEMGSRELSPNVVTYGSLIAGWCDKGMMNKAYSAYFEMIGKGIAPNIIIGSK 651

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           IVSSL RLGKIDEA+L+LH+MADIDP+VD   S KLP SGS  LETQKI D FGQR TSI
Sbjct: 652 IVSSLNRLGKIDEASLLLHKMADIDPIVDCVCSAKLPKSGSTHLETQKIADSFGQRATSI 711

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL 214
           PLSN+IVYNVAIAGLCKSKKVDD RR LSDLLL
Sbjct: 712 PLSNNIVYNVAIAGLCKSKKVDDVRRILSDLLL 744

BLAST of Lag0036878 vs. NCBI nr
Match: XP_022981984.1 (putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita maxima])

HSP 1 Score: 355.1 bits (910), Expect = 4.1e-94
Identity = 174/213 (81.69%), Postives = 189/213 (88.73%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEE
Sbjct: 532 MKELGCPSDGITYRTLIDGYCKVGNMVEALKLKNMVEREGIGVSIEMYNSLITGVFKSEE 591

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           LHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKGMM+KAYSAYFEMIDKGI PNIIIGSK
Sbjct: 592 LHKLSGLLAEMADRDLSPNVVTYGSLIAGWCDKGMMDKAYSAYFEMIDKGIAPNIIIGSK 651

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           IVSSLYRLGKIDEA+L+LHQMADIDPVVD + SI+L  SG R L+TQKI+D FG   TSI
Sbjct: 652 IVSSLYRLGKIDEASLILHQMADIDPVVDRSCSIELTKSGPRHLQTQKIMDSFGSNATSI 711

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL 214
           PLSN+I+YNVAIAGLCK KK+DD RR LSDLLL
Sbjct: 712 PLSNNIIYNVAIAGLCKFKKIDDVRRILSDLLL 744

BLAST of Lag0036878 vs. NCBI nr
Match: XP_022940949.1 (putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita moschata])

HSP 1 Score: 351.3 bits (900), Expect = 5.9e-93
Identity = 172/213 (80.75%), Postives = 189/213 (88.73%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEE
Sbjct: 532 MKELGCPSDGITYRTLIDGYCKVGNMVEALKLKNMVEREGIGVSIEMYNSLITGVFKSEE 591

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           LHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKGMM+KAYSAYFEMI+KGI PNIIIGSK
Sbjct: 592 LHKLSGLLAEMADRDLSPNVVTYGSLIAGWCDKGMMDKAYSAYFEMINKGIAPNIIIGSK 651

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           IVSSLYRLGKIDEA+L+LHQMADIDPVV  + S++L  SG R L+TQKI+D FG   TSI
Sbjct: 652 IVSSLYRLGKIDEASLILHQMADIDPVVGRSCSMELTKSGPRHLQTQKIMDSFGSNATSI 711

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL 214
           PLSN+I+YNVAIAG+CKSKKVDD RR LSDLLL
Sbjct: 712 PLSNNIIYNVAIAGICKSKKVDDVRRILSDLLL 744

BLAST of Lag0036878 vs. NCBI nr
Match: KAG7037839.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 351.3 bits (900), Expect = 5.9e-93
Identity = 172/213 (80.75%), Postives = 189/213 (88.73%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEE
Sbjct: 532 MKELGCPSDGITYRTLIDGYCKVGNMVEALKLKNMVEREGIGVSIEMYNSLITGVFKSEE 591

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           LHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKGMM+KAYSAYFEMI+KGI PNIIIGSK
Sbjct: 592 LHKLSGLLAEMADRDLSPNVVTYGSLIAGWCDKGMMDKAYSAYFEMINKGIAPNIIIGSK 651

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           IVSSLYRLGKIDEA+L+LHQMADIDPVV  + S++L  SG R L+TQKI+D FG   TSI
Sbjct: 652 IVSSLYRLGKIDEASLILHQMADIDPVVGRSCSMELTKSGPRHLQTQKIMDSFGSNATSI 711

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL 214
           PLSN+I+YNVAIAG+CKSKKVDD RR LSDLLL
Sbjct: 712 PLSNNIIYNVAIAGICKSKKVDDVRRILSDLLL 744

BLAST of Lag0036878 vs. NCBI nr
Match: XP_023523251.1 (putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita pepo subsp. pepo] >XP_023523252.1 putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.7 bits (896), Expect = 1.7e-92
Identity = 172/213 (80.75%), Postives = 188/213 (88.26%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEE
Sbjct: 532 MKELGCPSDGITYRTLIDGYCKVGNMVEALKLKNMVEREGIGVSIEMYNSLITGVFKSEE 591

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           LHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKG M+KAYSAYFEMI+KGI PNIIIGSK
Sbjct: 592 LHKLSGLLAEMADRDLSPNVVTYGSLIAGWCDKGRMDKAYSAYFEMINKGIAPNIIIGSK 651

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           IVSSLYRLGKIDEA+L+LHQMADIDPVV  + S++L  SG R L+TQKI+D FG   TSI
Sbjct: 652 IVSSLYRLGKIDEASLILHQMADIDPVVGRSCSMELTKSGPRHLQTQKIMDSFGSNATSI 711

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL 214
           PLSN+I+YNVAIAGLCKSKKVDD RR LSDLLL
Sbjct: 712 PLSNNIIYNVAIAGLCKSKKVDDVRRILSDLLL 744

BLAST of Lag0036878 vs. ExPASy Swiss-Prot
Match: Q9LN69 (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana OX=3702 GN=At1g19290 PE=3 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 2.3e-47
Identity = 101/210 (48.10%), Postives = 142/210 (67.62%), Query Frame = 0

Query: 6   CPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLI 65
           C P   TY+ L   Y KVGN+ EA  +K  +ER+GI  + +MYN+LI+GAF+   L+K+ 
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596

Query: 66  GLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSKIVSSL 125
            L+ E+ +R L+P V TYG+LI GWC+ GM++KAY+  FEMI+KGI  N+ I SKI +SL
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656

Query: 126 YRLGKIDEANLVLHQMADIDPVVDHAYSIK--LPNSGSRDLETQKIVDYFGQRT-TSIPL 185
           +RL KIDEA L+L ++ D D ++    S+K  L  S +  L+TQKI +     T   + +
Sbjct: 657 FRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLV 716

Query: 186 SNHIVYNVAIAGLCKSKKVDDGRRFLSDLL 213
            N+IVYNVAIAGLCK+ K++D R+  SDLL
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746

BLAST of Lag0036878 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24
Identity = 62/211 (29.38%), Postives = 108/211 (51.18%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           M ++G  P+++TY  LID +C+ G +  AL     +   G+  S   YNSLI G  +  +
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           +    G +AEM +++L P V+TY SL+ G+C KG + KA   Y EM  KGI P+I   + 
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           ++S L+R G I +A  + ++MA+ +   +      +      + +  K  ++  + T   
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDL 212
            + +   Y   I GLC + +  + + F+  L
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603

BLAST of Lag0036878 vs. ExPASy Swiss-Prot
Match: Q9CAM8 (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana OX=3702 GN=At1g63150 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-22
Identity = 63/206 (30.58%), Postives = 101/206 (49.03%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           M + GC PD +TY T+++  CK G++  AL L N +E   I A+  ++N++I    +   
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           +   + L  EM ++ + PNV+TY SLI   C+ G    A      M++K I PN++  + 
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333

Query: 121 IVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTT 180
           ++ + ++ GK+ EA  +  +M    IDP  D      L N         +    F    +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDP--DTITYNLLINGFCMHNRLDEAKQMFKFMVS 393

Query: 181 SIPLSNHIVYNVAIAGLCKSKKVDDG 205
              L N   YN  I G CK K+V+DG
Sbjct: 394 KDCLPNIQTYNTLINGFCKCKRVEDG 417

BLAST of Lag0036878 vs. ExPASy Swiss-Prot
Match: Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-22
Identity = 62/213 (29.11%), Postives = 101/213 (47.42%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           M + GC P+ +TY  +++  CK G+   AL L N +E   I A   ++N++I    +   
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           +   + L  EM ++ + PNV+TY SLI+  C  G    A     +MI+K I PN++  + 
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335

Query: 121 IVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTT 180
           ++ +  + GK  EA  +   M    IDP +   Y+  L N         K    F    +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDI-FTYN-SLVNGFCMHDRLDKAKQMFEFMVS 395

Query: 181 SIPLSNHIVYNVAIAGLCKSKKVDDGRRFLSDL 212
                + + YN  I G CKSK+V+DG     ++
Sbjct: 396 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426

BLAST of Lag0036878 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-22
Identity = 61/209 (29.19%), Postives = 103/209 (49.28%), Query Frame = 0

Query: 5   GCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKL 64
           GC PD  TY T+++  CK G++  AL L   +E+  I A   +Y ++I      + ++  
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274

Query: 65  IGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSKIVSS 124
           + L  EM+++ + PNV+TY SLI   C+ G    A     +MI++ I PN++  S ++ +
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334

Query: 125 LYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPL 184
             + GK+ EA  +  +M    IDP +   YS  L N         +    F    +    
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDI-FTYS-SLINGFCMHDRLDEAKHMFELMISKDCF 394

Query: 185 SNHIVYNVAIAGLCKSKKVDDGRRFLSDL 212
            N + YN  I G CK+K+V++G     ++
Sbjct: 395 PNVVTYNTLIKGFCKAKRVEEGMELFREM 421

BLAST of Lag0036878 vs. ExPASy TrEMBL
Match: A0A6J1CFX4 (putative pentatricopeptide repeat-containing protein At1g19290 OS=Momordica charantia OX=3673 GN=LOC111011313 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.1e-95
Identity = 180/213 (84.51%), Postives = 189/213 (88.73%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           MKELGC PDEITYRTLID YCKVGNM+EA K K++VEREGISAST MYNSLITG FRSEE
Sbjct: 532 MKELGCQPDEITYRTLIDGYCKVGNMVEAFKFKDLVEREGISASTGMYNSLITGVFRSEE 591

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           L KLIGLLAEM SRELSPNV+TYGSLIAGWCDKGMM KAYSAYFEMI KGI PNIIIGSK
Sbjct: 592 LPKLIGLLAEMGSRELSPNVVTYGSLIAGWCDKGMMNKAYSAYFEMIGKGIAPNIIIGSK 651

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           IVSSL RLGKIDEA+L+LH+MADIDP+VD   S KLP SGS  LETQKI D FGQR TSI
Sbjct: 652 IVSSLNRLGKIDEASLLLHKMADIDPIVDCVCSAKLPKSGSTHLETQKIADSFGQRATSI 711

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL 214
           PLSN+IVYNVAIAGLCKSKKVDD RR LSDLLL
Sbjct: 712 PLSNNIVYNVAIAGLCKSKKVDDVRRILSDLLL 744

BLAST of Lag0036878 vs. ExPASy TrEMBL
Match: A0A6J1J3C3 (putative pentatricopeptide repeat-containing protein At1g19290 OS=Cucurbita maxima OX=3661 GN=LOC111480971 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.0e-94
Identity = 174/213 (81.69%), Postives = 189/213 (88.73%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEE
Sbjct: 532 MKELGCPSDGITYRTLIDGYCKVGNMVEALKLKNMVEREGIGVSIEMYNSLITGVFKSEE 591

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           LHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKGMM+KAYSAYFEMIDKGI PNIIIGSK
Sbjct: 592 LHKLSGLLAEMADRDLSPNVVTYGSLIAGWCDKGMMDKAYSAYFEMIDKGIAPNIIIGSK 651

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           IVSSLYRLGKIDEA+L+LHQMADIDPVVD + SI+L  SG R L+TQKI+D FG   TSI
Sbjct: 652 IVSSLYRLGKIDEASLILHQMADIDPVVDRSCSIELTKSGPRHLQTQKIMDSFGSNATSI 711

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL 214
           PLSN+I+YNVAIAGLCK KK+DD RR LSDLLL
Sbjct: 712 PLSNNIIYNVAIAGLCKFKKIDDVRRILSDLLL 744

BLAST of Lag0036878 vs. ExPASy TrEMBL
Match: A0A6J1FLS8 (putative pentatricopeptide repeat-containing protein At1g19290 OS=Cucurbita moschata OX=3662 GN=LOC111446381 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.9e-93
Identity = 172/213 (80.75%), Postives = 189/213 (88.73%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEE
Sbjct: 532 MKELGCPSDGITYRTLIDGYCKVGNMVEALKLKNMVEREGIGVSIEMYNSLITGVFKSEE 591

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           LHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKGMM+KAYSAYFEMI+KGI PNIIIGSK
Sbjct: 592 LHKLSGLLAEMADRDLSPNVVTYGSLIAGWCDKGMMDKAYSAYFEMINKGIAPNIIIGSK 651

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           IVSSLYRLGKIDEA+L+LHQMADIDPVV  + S++L  SG R L+TQKI+D FG   TSI
Sbjct: 652 IVSSLYRLGKIDEASLILHQMADIDPVVGRSCSMELTKSGPRHLQTQKIMDSFGSNATSI 711

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL 214
           PLSN+I+YNVAIAG+CKSKKVDD RR LSDLLL
Sbjct: 712 PLSNNIIYNVAIAGICKSKKVDDVRRILSDLLL 744

BLAST of Lag0036878 vs. ExPASy TrEMBL
Match: A0A0A0LD67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854260 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.4e-92
Identity = 168/213 (78.87%), Postives = 191/213 (89.67%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           MKELG PPDEITYRTLID YCKVGN++EALKLK+M ER+GIS+ST+MYNSLITG FRSEE
Sbjct: 562 MKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEE 621

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           L KL GLLAEM +RELSPNV+TYGSLIAGWCDKGMM+KAY+AYF+MIDKGI PNIIIGSK
Sbjct: 622 LQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSK 681

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           IVSSLYR GKIDEANL+LHQ+ADIDP+  HA+S++LP S  R LETQKIVD FG++  SI
Sbjct: 682 IVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSI 741

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL 214
           P+SN+IVYN+AI GLCKSK +DD RR LSDLLL
Sbjct: 742 PISNNIVYNIAITGLCKSKNIDDVRRILSDLLL 774

BLAST of Lag0036878 vs. ExPASy TrEMBL
Match: A0A5A7U704 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00740 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.6e-89
Identity = 164/213 (77.00%), Postives = 186/213 (87.32%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           MKELG PPDEITYRTLID YCKVGN++EALKLK+M EREGISAS +MYNSLITG FRSEE
Sbjct: 532 MKELGFPPDEITYRTLIDGYCKVGNVVEALKLKDMAEREGISASIEMYNSLITGIFRSEE 591

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           L KL GLLAEM +RELSPNV+TYGSLIAGWCDKGMM KAY+AYF+MID+GI PNI IGSK
Sbjct: 592 LQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMNKAYNAYFKMIDEGIAPNITIGSK 651

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           IVSSLYRLGKIDEA+ +LH+MADIDP+  HA+SI+LP S  R  ET+KIVD F ++  SI
Sbjct: 652 IVSSLYRLGKIDEASSILHRMADIDPIAAHAHSIELPKSDLRHHETKKIVDSFDEKAMSI 711

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL 214
           P+SN+IVYN+AI GLCKSK +DD RR LSDLLL
Sbjct: 712 PMSNNIVYNIAITGLCKSKNIDDVRRILSDLLL 744

BLAST of Lag0036878 vs. TAIR 10
Match: AT1G19290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-48
Identity = 101/210 (48.10%), Postives = 142/210 (67.62%), Query Frame = 0

Query: 6   CPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLI 65
           C P   TY+ L   Y KVGN+ EA  +K  +ER+GI  + +MYN+LI+GAF+   L+K+ 
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596

Query: 66  GLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSKIVSSL 125
            L+ E+ +R L+P V TYG+LI GWC+ GM++KAY+  FEMI+KGI  N+ I SKI +SL
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656

Query: 126 YRLGKIDEANLVLHQMADIDPVVDHAYSIK--LPNSGSRDLETQKIVDYFGQRT-TSIPL 185
           +RL KIDEA L+L ++ D D ++    S+K  L  S +  L+TQKI +     T   + +
Sbjct: 657 FRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLV 716

Query: 186 SNHIVYNVAIAGLCKSKKVDDGRRFLSDLL 213
            N+IVYNVAIAGLCK+ K++D R+  SDLL
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746

BLAST of Lag0036878 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 8.7e-26
Identity = 62/211 (29.38%), Postives = 108/211 (51.18%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           M ++G  P+++TY  LID +C+ G +  AL     +   G+  S   YNSLI G  +  +
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           +    G +AEM +++L P V+TY SL+ G+C KG + KA   Y EM  KGI P+I   + 
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512

Query: 121 IVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSI 180
           ++S L+R G I +A  + ++MA+ +   +      +      + +  K  ++  + T   
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572

Query: 181 PLSNHIVYNVAIAGLCKSKKVDDGRRFLSDL 212
            + +   Y   I GLC + +  + + F+  L
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603

BLAST of Lag0036878 vs. TAIR 10
Match: AT1G63150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23
Identity = 63/206 (30.58%), Postives = 101/206 (49.03%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           M + GC PD +TY T+++  CK G++  AL L N +E   I A+  ++N++I    +   
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           +   + L  EM ++ + PNV+TY SLI   C+ G    A      M++K I PN++  + 
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333

Query: 121 IVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTT 180
           ++ + ++ GK+ EA  +  +M    IDP  D      L N         +    F    +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDP--DTITYNLLINGFCMHNRLDEAKQMFKFMVS 393

Query: 181 SIPLSNHIVYNVAIAGLCKSKKVDDG 205
              L N   YN  I G CK K+V+DG
Sbjct: 394 KDCLPNIQTYNTLINGFCKCKRVEDG 417

BLAST of Lag0036878 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.4e-23
Identity = 61/209 (29.19%), Postives = 103/209 (49.28%), Query Frame = 0

Query: 5   GCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKL 64
           GC PD  TY T+++  CK G++  AL L   +E+  I A   +Y ++I      + ++  
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274

Query: 65  IGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSKIVSS 124
           + L  EM+++ + PNV+TY SLI   C+ G    A     +MI++ I PN++  S ++ +
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334

Query: 125 LYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPL 184
             + GK+ EA  +  +M    IDP +   YS  L N         +    F    +    
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDI-FTYS-SLINGFCMHDRLDEAKHMFELMISKDCF 394

Query: 185 SNHIVYNVAIAGLCKSKKVDDGRRFLSDL 212
            N + YN  I G CK+K+V++G     ++
Sbjct: 395 PNVVTYNTLIKGFCKAKRVEEGMELFREM 421

BLAST of Lag0036878 vs. TAIR 10
Match: AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.4e-23
Identity = 62/213 (29.11%), Postives = 101/213 (47.42%), Query Frame = 0

Query: 1   MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEE 60
           M + GC P+ +TY  +++  CK G+   AL L N +E   I A   ++N++I    +   
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275

Query: 61  LHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKGIEPNIIIGSK 120
           +   + L  EM ++ + PNV+TY SLI+  C  G    A     +MI+K I PN++  + 
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335

Query: 121 IVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTT 180
           ++ +  + GK  EA  +   M    IDP +   Y+  L N         K    F    +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDI-FTYN-SLVNGFCMHDRLDKAKQMFEFMVS 395

Query: 181 SIPLSNHIVYNVAIAGLCKSKKVDDGRRFLSDL 212
                + + YN  I G CKSK+V+DG     ++
Sbjct: 396 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022140720.16.3e-9584.51putative pentatricopeptide repeat-containing protein At1g19290 [Momordica charan... [more]
XP_022981984.14.1e-9481.69putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita maxima... [more]
XP_022940949.15.9e-9380.75putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita moscha... [more]
KAG7037839.15.9e-9380.75putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
XP_023523251.11.7e-9280.75putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita pepo s... [more]
Match NameE-valueIdentityDescription
Q9LN692.3e-4748.10Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis th... [more]
Q9FJE61.2e-2429.38Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... [more]
Q9CAM82.0e-2230.58Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana OX... [more]
Q9SXD83.3e-2229.11Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX... [more]
Q9LQ143.3e-2229.19Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1CFX43.1e-9584.51putative pentatricopeptide repeat-containing protein At1g19290 OS=Momordica char... [more]
A0A6J1J3C32.0e-9481.69putative pentatricopeptide repeat-containing protein At1g19290 OS=Cucurbita maxi... [more]
A0A6J1FLS82.9e-9380.75putative pentatricopeptide repeat-containing protein At1g19290 OS=Cucurbita mosc... [more]
A0A0A0LD671.4e-9278.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854260 PE=4 SV=1[more]
A0A5A7U7045.6e-8977.00Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
Match NameE-valueIdentityDescription
AT1G19290.11.6e-4848.10Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G59900.18.7e-2629.38Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G63150.11.4e-2330.58Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62930.12.4e-2329.19Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62590.12.4e-2329.11pentatricopeptide (PPR) repeat-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 11..44
e-value: 4.3E-5
score: 21.4
coord: 47..80
e-value: 0.0017
score: 16.4
coord: 81..115
e-value: 2.0E-8
score: 31.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 187..210
e-value: 0.16
score: 12.3
coord: 47..74
e-value: 0.2
score: 12.0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 5..32
e-value: 4.9E-9
score: 35.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 78..115
e-value: 4.1E-9
score: 36.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 79..113
score: 12.232868
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 44..78
score: 8.506026
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 10.457138
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..35
e-value: 7.5E-9
score: 37.3
coord: 36..145
e-value: 1.5E-21
score: 78.8
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 59..211
coord: 1..72
NoneNo IPR availablePANTHERPTHR47942:SF21OS05G0275100 PROTEINcoord: 59..211
coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0036878.1Lag0036878.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding