Lag0036823 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0036823
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionbZIP transcription factor 11-like
Locationchr2: 1405531 .. 1406043 (-)
RNA-Seq ExpressionLag0036823
SyntenyLag0036823
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGTTCTAGTGGGAATTCTTCAGGTTCGTTATCTCAGATTGTGCTTCAGAACCAGAGCTCTGGTTCTGAAGAGGAGCTGAGGCAATTGATGGACCAAAGAAAAAGAAAACGAATGCAATCGAATCGGGAATCGGCGAGGCGATCGAGGATGCGAAAACAGCAGCACTTGGACGGGCTGATGGCGCAAGTCAGCCAGTTGAGGGAAAACAAAAACCAAATGATTTCCAGAATTAATCTCACTACGCATCTTTTTCTCAACGTCGAAGCCGAAAACTCTGTTTTGAAAGCTCAGATTCTGGAACTTACCCATAGATTAGACTCGTTAAACCAGATCCTCTTCCAAATCAACAACAACAACAACGACGAAGAAGAAGATCATTTTCTTCTAAACTTTCATGATTTTGATTTCGATCTTGATTTTGATCGTAACCCATTATTCCTCAACTCCTTCTTCCTCACCCAGCAACCCATTGTGGCTTCTGCTGATCATCACGTGCTTCACTACTGA

mRNA sequence

ATGGGTTGTTCTAGTGGGAATTCTTCAGGTTCGTTATCTCAGATTGTGCTTCAGAACCAGAGCTCTGGTTCTGAAGAGGAGCTGAGGCAATTGATGGACCAAAGAAAAAGAAAACGAATGCAATCGAATCGGGAATCGGCGAGGCGATCGAGGATGCGAAAACAGCAGCACTTGGACGGGCTGATGGCGCAAGTCAGCCAGTTGAGGGAAAACAAAAACCAAATGATTTCCAGAATTAATCTCACTACGCATCTTTTTCTCAACGTCGAAGCCGAAAACTCTGTTTTGAAAGCTCAGATTCTGGAACTTACCCATAGATTAGACTCGTTAAACCAGATCCTCTTCCAAATCAACAACAACAACAACGACGAAGAAGAAGATCATTTTCTTCTAAACTTTCATGATTTTGATTTCGATCTTGATTTTGATCGTAACCCATTATTCCTCAACTCCTTCTTCCTCACCCAGCAACCCATTGTGGCTTCTGCTGATCATCACGTGCTTCACTACTGA

Coding sequence (CDS)

ATGGGTTGTTCTAGTGGGAATTCTTCAGGTTCGTTATCTCAGATTGTGCTTCAGAACCAGAGCTCTGGTTCTGAAGAGGAGCTGAGGCAATTGATGGACCAAAGAAAAAGAAAACGAATGCAATCGAATCGGGAATCGGCGAGGCGATCGAGGATGCGAAAACAGCAGCACTTGGACGGGCTGATGGCGCAAGTCAGCCAGTTGAGGGAAAACAAAAACCAAATGATTTCCAGAATTAATCTCACTACGCATCTTTTTCTCAACGTCGAAGCCGAAAACTCTGTTTTGAAAGCTCAGATTCTGGAACTTACCCATAGATTAGACTCGTTAAACCAGATCCTCTTCCAAATCAACAACAACAACAACGACGAAGAAGAAGATCATTTTCTTCTAAACTTTCATGATTTTGATTTCGATCTTGATTTTGATCGTAACCCATTATTCCTCAACTCCTTCTTCCTCACCCAGCAACCCATTGTGGCTTCTGCTGATCATCACGTGCTTCACTACTGA

Protein sequence

MGCSSGNSSGSLSQIVLQNQSSGSEEELRQLMDQRKRKRMQSNRESARRSRMRKQQHLDGLMAQVSQLRENKNQMISRINLTTHLFLNVEAENSVLKAQILELTHRLDSLNQILFQINNNNNDEEEDHFLLNFHDFDFDLDFDRNPLFLNSFFLTQQPIVASADHHVLHY
Homology
[Close]
BLAST of Lag0036823 vs. NCBI nr
Match: XP_023523640.1 (bZIP transcription factor 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.0 bits (650), Expect = 4.6e-64
Identity = 146/177 (82.49%), Postives = 155/177 (87.57%), Query Frame = 0 

Query: 1   MGCSSGNSSGSLSQIVLQNQSSGSEEELRQLMDQRKRKRMQSNRESARRSRMRKQQHLDG 60
           MGC SGNSSGS+SQI +QNQSSGSEEELRQLMDQRKR+RMQSNRESARRSRMRKQQHLDG
Sbjct: 1   MGCCSGNSSGSISQIGVQNQSSGSEEELRQLMDQRKRRRMQSNRESARRSRMRKQQHLDG 60

Query: 61  LMAQVSQLRENKNQMISRINLTTHLFLNVEAENSVLKAQILELTHRLDSLNQILFQINNN 120
           LMAQV QLRENKNQMISRINLTTHLFLNVEAENSVL+AQILELTHRLDSLN+IL  INNN
Sbjct: 61  LMAQVGQLRENKNQMISRINLTTHLFLNVEAENSVLRAQILELTHRLDSLNRILSHINNN 120

Query: 121 NNDEEEDH--FLLNF------HDFDFDLDFDRNPLFLNSFFLTQQPIVASADHHVLH 170
           NND++E+   FL NF      +DFDFD DFD NP FLNSF   Q PIVASADHHVLH
Sbjct: 121 NNDKDEEQHIFLQNFDDYDYHYDFDFDFDFDHNPSFLNSFLSQQPPIVASADHHVLH 177

[Close]
BLAST of Lag0036823 vs. NCBI nr
Match: XP_022940554.1 (bZIP transcription factor 11-like [Cucurbita moschata])

HSP 1 Score: 251.1 bits (640), Expect = 6.6e-63
Identity = 148/179 (82.68%), Postives = 154/179 (86.03%), Query Frame = 0 

Query: 1   MGCSSGNSSGSLSQIVLQNQSSGSEEELRQLMDQRKRKRMQSNRESARRSRMRKQQHLDG 60
           MGC SGNSSGSLSQI +QNQSSGSEEELRQLMDQRKR+RMQSNRESARRSRMRKQQHLDG
Sbjct: 1   MGCCSGNSSGSLSQIGVQNQSSGSEEELRQLMDQRKRRRMQSNRESARRSRMRKQQHLDG 60

Query: 61  LMAQVSQLRENKNQMISRINLTTHLFLNVEAENSVLKAQILELTHRLDSLNQILFQINNN 120
           LMAQV QLRENKNQMISRINLTTHLFLNVEAENSVL+AQILELTHRLDSLN+IL  INNN
Sbjct: 61  LMAQVGQLRENKNQMISRINLTTHLFLNVEAENSVLRAQILELTHRLDSLNRILSHINNN 120

Query: 121 NND-EEEDH-FLLNF--------HDFDFDLDFDRNPLFLNSFFLTQQPIVASADHHVLH 170
           N+D +EE H FL NF         DFDFD DFD NP FLNSF   Q PIVASADHHVLH
Sbjct: 121 NDDKDEEPHIFLQNFDDYDYHYDFDFDFDFDFDHNPSFLNSFLSQQPPIVASADHHVLH 179

[Close]
BLAST of Lag0036823 vs. NCBI nr
Match: XP_022981832.1 (bZIP transcription factor 11-like [Cucurbita maxima])

HSP 1 Score: 247.7 bits (631), Expect = 7.3e-62
Identity = 145/179 (81.01%), Postives = 154/179 (86.03%), Query Frame = 0 

Query: 1   MGCSSGNSSGSLSQIVLQNQSSGSEEELRQLMDQRKRKRMQSNRESARRSRMRKQQHLDG 60
           MGC SGNSSGS+SQI +QNQSSGSEEELRQLMDQRKR+RMQSNRESARRSRMRKQQHLDG
Sbjct: 1   MGCCSGNSSGSISQIGVQNQSSGSEEELRQLMDQRKRRRMQSNRESARRSRMRKQQHLDG 60

Query: 61  LMAQVSQLRENKNQMISRINLTTHLFLNVEAENSVLKAQILELTHRLDSLNQILFQINNN 120
           LMAQV QLRENK+QMISRINLT HLFLNVEAENSVL+AQILELTHRLDSLN+IL  INNN
Sbjct: 61  LMAQVGQLRENKSQMISRINLTNHLFLNVEAENSVLRAQILELTHRLDSLNRILSHINNN 120

Query: 121 NND-----EEEDH-FLLNFHD----FDFDLDFDRNPLFLNSFFLTQQPIVASADHHVLH 170
           +ND     +EE H FL NF D    +DFD DFDRNP FLNSF   Q PIVASADHHVLH
Sbjct: 121 DNDNDNDKDEEQHIFLQNFDDYDYNYDFDFDFDRNPSFLNSFLSQQPPIVASADHHVLH 179

[Close]
BLAST of Lag0036823 vs. NCBI nr
Match: XP_023535564.1 (bZIP transcription factor 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.5 bits (615), Expect = 5.3e-60
Identity = 137/174 (78.74%), Postives = 153/174 (87.93%), Query Frame = 0 

Query: 1   MGCSSGNSSGSLSQIVLQNQSSGSEEELRQLMDQRKRKRMQSNRESARRSRMRKQQHLDG 60
           M C SGNSSGSLSQI +QNQSSGSEEELRQL+DQRKRKRMQSNRESARRSRMRKQQHLDG
Sbjct: 1   MDCCSGNSSGSLSQIAVQNQSSGSEEELRQLLDQRKRKRMQSNRESARRSRMRKQQHLDG 60

Query: 61  LMAQVSQLRENKNQMISRINLTTHLFLNVEAENSVLKAQILELTHRLDSLNQILFQINNN 120
           LMAQ+SQLRENKNQ++SRINL T LFLNVEA+NSVL+AQI+ELTH L+SLNQIL  INNN
Sbjct: 61  LMAQLSQLRENKNQIVSRINLATQLFLNVEAQNSVLRAQIVELTHSLESLNQILSHINNN 120

Query: 121 NN----DEEEDHFLLNFHDFDFDLDFDRNPLFLNSFFLTQQPIVASADHHVLHY 171
           NN    +E++ +FL NF+      DFD+ PLF+NSFFLTQQPIVASADHHVLHY
Sbjct: 121 NNNHNQEEQQHNFLQNFY------DFDQTPLFINSFFLTQQPIVASADHHVLHY 168

[Close]
BLAST of Lag0036823 vs. NCBI nr
Match: XP_038897069.1 (bZIP transcription factor 11-like [Benincasa hispida])

HSP 1 Score: 237.3 bits (604), Expect = 9.9e-59
Identity = 143/177 (80.79%), Postives = 159/177 (89.83%), Query Frame = 0 

Query: 1   MGCSSGNSSGSLS-QIVLQNQSSGSEEELRQLMDQRKRKRMQSNRESARRSRMRKQQHLD 60
           M CSSGNSSGSLS Q+VLQNQSSGSE EL+QLMDQRKRKRMQSNRESARRSRMRKQQHLD
Sbjct: 3   MDCSSGNSSGSLSDQVVLQNQSSGSEAELKQLMDQRKRKRMQSNRESARRSRMRKQQHLD 62

Query: 61  GLMAQVSQLRENKNQMISRINLTTHLFLNVEAENSVLKAQILELTHRLDSLNQILFQINN 120
           GLMAQVSQLR+NKNQMISRI+LTT LFLN+EAENSVLKAQILELTHRL+SLNQIL  INN
Sbjct: 63  GLMAQVSQLRDNKNQMISRIHLTTQLFLNIEAENSVLKAQILELTHRLESLNQILSHINN 122

Query: 121 NNNDE--EEDHFLLNFHDFDFDLDFDRNPLFLNSFFLT----QQPIVASADHHVLHY 171
           N++DE  ++++FL NF D +FD DFD NPLF+NSFFLT    QQPI+ASA HH+LHY
Sbjct: 123 NDDDEQQQQNNFLQNFCD-NFD-DFDLNPLFINSFFLTQHQQQQPIMASAHHHLLHY 177

[Close]
BLAST of Lag0036823 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.5e-21
Identity = 79/168 (47.02%), Postives = 109/168 (64.88%), Query Frame = 0 

Query: 1   MGCSSGNSSGSLSQIVLQNQSSGSEEELRQ--LMDQRKRKRMQSNRESARRSRMRKQQHL 60
           MG S+  +  S+S   L N  SGSE +LRQ  L+D+RKRKR QSNRESARRSRMRKQ+HL
Sbjct: 7   MGSSTSGNCSSVSTTGLAN--SGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHL 66

Query: 61  DGLMAQVSQLRENKNQMISRINLTTHLFLNVEAENSVLKAQILELTHRLDSLNQILFQIN 120
           D L AQV+ LR+   Q+++ I +TT  ++ +EAEN +L+AQ+LEL HRL SLN+I+  + 
Sbjct: 67  DDLTAQVTHLRKENAQIVAGIAVTTQHYVTIEAENDILRAQVLELNHRLQSLNEIVDFVE 126

Query: 121 NNNNDEEEDHFLLNFHDFDFD---LDFDRNPLFLNSFFLTQQPIVASA 164
           ++++      F +      FD    D   NP+ L  +    QPI+ASA
Sbjct: 127 SSSSG-----FGMETGQGLFDGGLFDGVMNPMNLGFY---NQPIMASA 164

[Close]
BLAST of Lag0036823 vs. ExPASy Swiss-Prot
Match: O65683 (bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.5e-20
Identity = 71/158 (44.94%), Postives = 106/158 (67.09%), Query Frame = 0 

Query: 7   NSSGSLSQIVLQNQSSGSEEELRQLMDQRKRKRMQSNRESARRSRMRKQQHLDGLMAQVS 66
           +SSG+ S  +    SSGSEE    LM+QRKRKRM SNRESARRSRM+KQ+ LD L AQV+
Sbjct: 4   SSSGTTSSTI--QTSSGSEE---SLMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQVN 63

Query: 67  QLRENKNQMISRINLTTHLFLNVEAENSVLKAQILELTHRLDSLNQILFQINNNNNDEEE 126
            L++   ++++ +++TT  +L VEAENSVL+AQ+ EL HRL SLN I+  ++++NN+   
Sbjct: 64  HLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSNNNNNN 123

Query: 127 DHFLLNFHDFDFDLDFDRNPLFLNSFFLTQQPIVASAD 165
           +  + +      + D D     +N  ++  QP++AS+D
Sbjct: 124 NMGMCSNPLVGLECD-DFFVNQMNMSYIMNQPLMASSD 155

[Close]
BLAST of Lag0036823 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16
Identity = 48/89 (53.93%), Postives = 71/89 (79.78%), Query Frame = 0 

Query: 32  MDQRKRKRMQSNRESARRSRMRKQQHLDGLMAQVSQLRENKNQMISRINLTTHLFLNVEA 91
           +D+RKRKRM SNRESARRSRMRKQ+H+D L AQ++QL  +  Q+++ + +T+ L++ ++A
Sbjct: 28  VDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNRQILNSLTVTSQLYMKIQA 87

Query: 92  ENSVLKAQILELTHRLDSLNQILFQINNN 121
           ENSVL AQ+ EL+ RL SLN+I+  + +N
Sbjct: 88  ENSVLTAQMEELSTRLQSLNEIVDLVQSN 116

[Close]
BLAST of Lag0036823 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-10
Identity = 41/93 (44.09%), Postives = 65/93 (69.89%), Query Frame = 0 

Query: 22  SGSEEELRQLMDQRKRKRMQSNRESARRSRMRKQQHLDGLMAQVSQLRENKNQMISRINL 81
           S ++     + D+RKRKRM SNRESARRSRMRKQ+ L  L+ +V+ L+ +  ++  +++ 
Sbjct: 12  SDNDPRYATVTDERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQVDE 71

Query: 82  TTHLFLNVEAENSVLKAQILELTHRLDSLNQIL 115
            +  ++ +E++N+VL+AQ  ELT RL SLN +L
Sbjct: 72  ASKKYIEMESKNNVLRAQASELTDRLRSLNSVL 104

[Close]
BLAST of Lag0036823 vs. ExPASy Swiss-Prot
Match: P24068 (Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 4.9e-08
Identity = 45/107 (42.06%), Postives = 71/107 (66.36%), Query Frame = 0 

Query: 8   SSGSLSQIVLQNQSSGSEEELRQLMDQRKRKRMQSNRESARRSRMRKQQHLDGLMAQVSQ 67
           SS SLS      ++SGS+ +      +R+++R+ SNRESARRSR+RKQQHLD L+ +V++
Sbjct: 2   SSSSLSPTA--GRTSGSDGDSAADTHRREKRRL-SNRESARRSRLRKQQHLDELVQEVAR 61

Query: 68  LRENKNQMISRINLTTHLFLNVEAENSVLKAQILELTHRLDSLNQIL 115
           L+ +  ++ +R       +  VE EN+VL+A+  EL  RL S+N++L
Sbjct: 62  LQADNARVAARARDIASQYTRVEQENTVLRARAAELGDRLRSVNEVL 105

The following BLAST results are available for this feature:
BLAST of Lag0036823 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023523640.14.6e-6482.49bZIP transcription factor 11-like [Cucurbita pepo subsp. pepo][more]
XP_022940554.16.6e-6382.68bZIP transcription factor 11-like [Cucurbita moschata][more]
XP_022981832.17.3e-6281.01bZIP transcription factor 11-like [Cucurbita maxima][more]
XP_023535564.15.3e-6078.74bZIP transcription factor 11-like [Cucurbita pepo subsp. pepo][more]
XP_038897069.19.9e-5980.79bZIP transcription factor 11-like [Benincasa hispida][more]
BLAST of Lag0036823 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
C0Z2L58.5e-2147.02bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1[more]
O656835.5e-2044.94bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1[more]
Q9SI151.7e-1653.93bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1[more]
Q9LZP85.2e-1044.09bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1[more]
P240684.9e-0842.06Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..78
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableGENE3D1.20.5.170coord: 33..88
e-value: 6.5E-11
score: 44.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..56
NoneNo IPR availablePANTHERPTHR45764BZIP TRANSCRIPTION FACTOR 44coord: 1..136
NoneNo IPR availablePANTHERPTHR45764:SF54BASIC-LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..136
NoneNo IPR availableCDDcd14702bZIP_plant_GBF1coord: 36..86
e-value: 4.30763E-15
score: 63.707
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 35..86
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 31..95
e-value: 9.0E-17
score: 71.7
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 35..80
e-value: 5.2E-9
score: 36.1
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 38..53
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 33..80
score: 9.806234

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0036823.1Lag0036823.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000976 transcription cis-regulatory region binding