Lag0036703 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0036703
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	expressed protein localized to the inner membrane of the chloroplast.
Location	chr2: 468496 .. 472500 (+)
RNA-Seq Expression	Lag0036703
Synteny	Lag0036703

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGGACTCTTTAATTTTATTAGTCAAAATTTACCCTCGAAAATTGTCCTGTCAGGATCAAATCTGAAGACTGCCAATAAACGTCTTGGGAGTGTGTCTCCTACCAACTTGTTACTCAATCCTGGCTGGGTAGGAAAGGCGAAGCTTTCTACAATTAGGCAGCCACTTTCAGTTCAAGCTGCATATAGGTATAATCTTTGAAATCGCTAAAACAATATGCCATTAAGTCATCTCATACGAAAGAATTACAGTCTAGAGAGTCTATTTTTGGAAGGAATTATGATTAATCACTTATGTAGCAATGAGAGACTCTTCACATGTTTGAGATGCATGTTTAGAATCCTTGTACGGATAGGCTTATTGTTGGGGTGTGCAAAAACTGGAAAAAGAGCTGCCGTACTAAACTGAATTGAATGTGTTAATCTCAGGCAGTCAACAACCAAGGACCTAACCAATTTGAGCTGAACCAGTCAAACTGGTTCAAACAGATCTGCAACCAATGGAATGGGCCTGTTTGGTTTGTTATGCTCGAAACTGAGACTCATTAATTTAGTTTTGATTTGGATAAAGTCCCGACTGAATCAACATAATGAATGCATGTATCCATCATATTCTAGATGTCAAATGAAATGGTTGTTGAATTTGATCTATAACTCAGTATGGTTCAAATTCAACTACTGTTTCATTTAATCTCAAAAAAAGACAAACAACCGTTTCATTTGACATCTAGAATATGATGAGTACATGCTCGCAGCGCTTGGTCTTTTCTGCTGAATGAATTTTGGTTTGGAGCTATGCCTCCCTCTGAGAGTGAACCACAACATTTTGTGGCTGTCTGTACTCTCCTTTGGTTAGTTTAGTTTGGAAGGAGAGAAACAATAGGGTTTTTAAAGACAAGGAGAATGTGGTGGATTTTTTTTTTTGTAATATTAATTACAAAAGAATTTTGTTTGGTTGGAACACCACCATGAAGCTAAATGTTATACACTATTACAAAAAAAAATCCACCACATTCTCCTTGTCTTCAATGATTAATAATGATTGGAAGGCTACGACCTTACTTGAACAGGATCTGTTTTATAGGTTGTACATCTGTGTCCTTGAGTTCTAAAAAATAATGATTGGAAGGCTCTAATGGTCTAGTTTTGGGTGGGGGATTTCTTTTCTGGCCTTAGGTTGTTTCTCACTCTTTTTGGTCTATGGAGCATTGTTTCTTATCCCAAAAAGAAAAACAAGAAACTTTGTATGGTCTGTAACAATTGTTAGAATACCTTATAGCATTTTTTAGTGGAAATTAATACTAGTATTAGTATAAGTTTCAAATGGACTTGGCACAAGTTAATGTCTATTATATTGTATATTGTCTTGGTGAGACCGTCCTATATGCTTCATTTGAAATATTCTAATGGCAGTTTATTGTGCACCTTGTGACAGTGATGGAGGACGGTCAAGCAATGCAGGCATTTTTATTGGAGGTTTTGTACTGGGAGGCCTCATAGTTGGCACGCTTGGTTGTGTATATGCCCCTCAGGTTTTTAACTTTTGTTCATTTCTTGTCTAACCTCTAAATTGTACGTGTGGGAAATTCCACCTGGTATATCTTATACTTGTGTGCTATAGATACTACATTATGGAAGATATAGGATTAAGTTATCTACTAAGGATATGCACAACTATTAGCTCTGAGCTTCAAGTGCAGAATCCTAGTCTTTTTATGTCTCAGAGTTGATCTTGCATTTGAATTACAGATTAGCAAGACACTTGCTGGGGCAGACCGAAAGGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGGTGCGAAATCACTCATCTCTTCTCATTTGTTGCAAATAATCTCCTGAATGAACAATTCGTCTTCACTTGGCGTTGATTTGCCTGATGATAATTGTGGGTTTTATTTTATTTATTGGCAACATCATATATACTTCTTAACCATCATGGGTTGACAAAGTGATAATTGGCCCTGTAGAGAAAGAAATAGGCTTAGAAGAAATGAGTTCAAATCATGGTAGCCACCTATCTAGAATTTAAAATTCTACTAGTTTTATTGACAACGAAATGTAGCATGATCAAGTAGTTATTTTTGTTAGATCAGTCAAGGTTGACATAAGGTGGCTCCAACACTTACCAATACTAAAAAAATTGGGCAAATTCTAAAAACCACCCTTGAAGTATGGTGGTCGTAACAATTGCACCCCTAAACTTTTAATTGACAAGTGAAAAAATCAAACCCCTAAACTTTGAATAGTAAAATTAAACCCTCCAACGATAAATGTTAAAATCGGATCCAAATTACTTTATTTCTCTTACCTTTATTCTTCTCTCTCCTCATTTCACTCTCTCTACTTTCTCCCTCTCCCTCTCCCTCTCTTCAATCACCCACTCTCTCTGTGCTTTTTCTTTCTACCCAATCCACTAATTGCCAATATTTCTATCGGCCACTACTGTAATTAGTAATATCGTGATTCCTTAACATTACTCCTAATTCCAGTTTTCTTAGTTTGGCAAGTAGAAGTAGCATCTGGCGTGGCTGAATGGGAATTTTACGAAAAACGGGTTATATGAATGACAATGGGTTCATCCGTACGACCCAAATTGGGGAAAACAATACAAGGCTCAGGCGTATGTTTTGGTTTACTATTACTTTAATTTCAGACCCAAAAGATCCTAATTCTCAATTCCATTTAAAATTTTTGATTTACCCAAATTCCCCAACGGCCGAAATTAGAAGAGCATAAGTGAGGTCGTCAATGGTTATGAGGTAGCATTGATGGGTTTCGCTTACAGTGACAAGGGGTTCACCATTGTCGGGTCAGCACTCACAATTAGCAAAGATAGTGAAGTTTTCCATGGCTACGTGAATGATTGGAGTATTCTTCTACAGGAGGAGAGAGAAAAGTAGAGATTAAGGGAATTGAAGCTAGAAAGAGAAGAAAGTTGGTCCAAATTTTAACATTTATGATAGTCGGAGGGTTTAATTTTACCATTCAAAGTTCAGGGGTTTGAATTTTACACTTAAAAGTGTAGGGGTGCAATTGTTTCAACCACCATACTTTAGTGGTGGTTTTTGCAATTTGCCCAAAAAAAAGTCACGTATTCTTCTTTCCAAGCTTCATCAACTTCTTGTCAAAGATGTTAAAATGTGGAAGCTTTAGTTTTGACAATTTTTCAAGGGGTATTTAACTTATAAGTAAGATCTGTGTAATCTAAGGTTAAAGGAGTCAAATTGATATGTAGCTTTGCTTATCCTGGGATACAAGTTTGCTAATTCTAAGGAATACACAAACTTACATTATATAAATCTAAAAGATGTCTTTTATAATACATACTAAATTTTATATATCATTAACTCACCAACCAAATGCAAATTACTAATTCATTTGCCAATTCAAACAAGCTGATCAGTTAAATATGGCACTTCCATTTGGTTTATGAGAGATGTTTTGTCGGTATTTAGTATGAAATACAAGTATAATTAATAATATGCTTGGACTTATGACATTGTCTAGAAGATTAGCAAACTTGTAGATCAGGATAAGCAATTCTACACCCATCTAGATTATACAAAATTAACCTATGAACCAAACACACCCCATGTTGCTTACCATTAAGATTTGTCCAAAATTTTTAAAGATCGAAAATATGACGATACTTTGCGTTTGTTTCTGGATTTTTTTTTCGTTTTCTTTTTCTTTTATTAAAAAAAATGTGAACTTCATTTTGAGAAGAAATATGATAATAGGTTTTGTTTAAACCGTTCCTGCTTGGTTTTTGGTTTCTGGATTCTGATGTGCCAACATGTACGTGCACTTTATTCAAATTGCAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTGCTCAGCTCCGCACAGAGGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAGTTGAACCTGCCCTTTGA

mRNA sequence

ATGCATGGACTCTTTAATTTTATTAGTCAAAATTTACCCTCGAAAATTGTCCTGTCAGGATCAAATCTGAAGACTGCCAATAAACGTCTTGGGAGTGTGTCTCCTACCAACTTGTTACTCAATCCTGGCTGGGCAGTCAACAACCAAGGACCTAACCAATTTGAGCTGAACCAGTCAAACTGGTTCAAACAGATCTGCAACCAATGGAATGGGCCTGTTTGCGCTTGGTCTTTTCTGCTGAATGAATTTTGGTTTGGAGCTATGCCTCCCTCTGAGAGTGAACCACAACATTTTGTGGCTGTCTGTACTCTCCTTTGTGATGGAGGACGGTCAAGCAATGCAGGCATTTTTATTGGAGGTTTTGTACTGGGAGGCCTCATAGTTGGCACGCTTGGTTGTGTATATGCCCCTCAGATTAGCAAGACACTTGCTGGGGCAGACCGAAAGGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTGCTCAGCTCCGCACAGAGGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAGTTGAACCTGCCCTTTGA

Coding sequence (CDS)

ATGCATGGACTCTTTAATTTTATTAGTCAAAATTTACCCTCGAAAATTGTCCTGTCAGGATCAAATCTGAAGACTGCCAATAAACGTCTTGGGAGTGTGTCTCCTACCAACTTGTTACTCAATCCTGGCTGGGCAGTCAACAACCAAGGACCTAACCAATTTGAGCTGAACCAGTCAAACTGGTTCAAACAGATCTGCAACCAATGGAATGGGCCTGTTTGCGCTTGGTCTTTTCTGCTGAATGAATTTTGGTTTGGAGCTATGCCTCCCTCTGAGAGTGAACCACAACATTTTGTGGCTGTCTGTACTCTCCTTTGTGATGGAGGACGGTCAAGCAATGCAGGCATTTTTATTGGAGGTTTTGTACTGGGAGGCCTCATAGTTGGCACGCTTGGTTGTGTATATGCCCCTCAGATTAGCAAGACACTTGCTGGGGCAGACCGAAAGGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTGCTCAGCTCCGCACAGAGGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAGTTGAACCTGCCCTTTGA

Protein sequence

MHGLFNFISQNLPSKIVLSGSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSNWFKQICNQWNGPVCAWSFLLNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL

Homology

[Close]

BLAST of Lag0036703 vs. NCBI nr
Match: XP_038900139.1 (uncharacterized protein LOC120087268 [Benincasa hispida])

HSP 1 Score: 222.2 bits (565), Expect = 4.1e-54
Identity = 128/192 (66.67%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 20  GSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSNWFKQICNQWNGPVCAWSFL 79
           GSNLKTANK LGSVSPT+LLL PGW    +                              
Sbjct: 21  GSNLKTANKHLGSVSPTSLLLGPGWVGKTK------------------------------ 80

Query: 80  LNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQI 139
           L+ F            +  ++V     DGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQI
Sbjct: 81  LSTF------------RRPLSVQAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQI 140

Query: 140 SKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNG 199
           SK LAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNG
Sbjct: 141 SKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNG 170

Query: 200 VAVNSDEVEPAL 212
           VAVNSDEVEPA+
Sbjct: 201 VAVNSDEVEPAI 170

[Close]

BLAST of Lag0036703 vs. NCBI nr
Match: KAG6591206.1 (hypothetical protein SDJN03_13552, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024090.1 hypothetical protein SDJN02_12903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-53
Identity = 127/206 (61.65%), Postives = 143/206 (69.42%), Query Frame = 0


Query: 6   NFISQNLPSKIVLSGSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSNWFKQI 65
           + +S   P   + SGSNLKTA+K LGSVSPT+LLLNPGW     G  +   ++     Q 
Sbjct: 7   SLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWV----GKAKLSTSRRPLSVQA 66

Query: 66  CNQWNGPVCAWSFLLNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGG 125
             ++N        L N                         DGGRSSNAGIF+GGFVLGG
Sbjct: 67  AYRYN--------LRNR------------------------DGGRSSNAGIFVGGFVLGG 126

Query: 126 LIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 185
           LIVGTLGCVYAPQISK LAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID
Sbjct: 127 LIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 176

Query: 186 EVSAQLRTEDPPNGVAVNSDEVEPAL 212
           EVS+QLRT+DPPNGVAVNSDE+EPA+
Sbjct: 187 EVSSQLRTDDPPNGVAVNSDEIEPAI 176

[Close]

BLAST of Lag0036703 vs. NCBI nr
Match: KAG7037964.1 (hypothetical protein SDJN02_01597, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-53
Identity = 131/211 (62.09%), Postives = 142/211 (67.30%), Query Frame = 0


Query: 1   MHGLFNFISQNLPSKIVLSGSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSN 60
           M+   N IS +L S I L GSNLKTA+KR GSVSPT  LLNPGW    +           
Sbjct: 1   MYVPINCISLSLLSPIFLPGSNLKTADKRFGSVSPTRSLLNPGWVGKAK----------- 60

Query: 61  WFKQICNQWNGPVCAWSFLLNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGG 120
                              L+ F            +  ++V     DGGRSS+AGIFIGG
Sbjct: 61  -------------------LSTF------------RRPLSVQAAYSDGGRSSSAGIFIGG 120

Query: 121 FVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQL 180
           FVLGGLIVGTLGCVYAPQISK LAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQL
Sbjct: 121 FVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQL 169

Query: 181 NSAIDEVSAQLRTEDPPNGVAVNSDEVEPAL 212
           NSAIDEVS+QLRTED PNGVAVNSDEVEPA+
Sbjct: 181 NSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 169

[Close]

BLAST of Lag0036703 vs. NCBI nr
Match: XP_022936063.1 (uncharacterized protein LOC111442778 [Cucurbita moschata])

HSP 1 Score: 219.2 bits (557), Expect = 3.5e-53
Identity = 125/206 (60.68%), Postives = 142/206 (68.93%), Query Frame = 0


Query: 6   NFISQNLPSKIVLSGSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSNWFKQI 65
           + +S   P   + SGSNLKTA+K LGSVSPT+LLLNPGW        + +L+ S      
Sbjct: 7   SLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWV------GKAKLSTS------ 66

Query: 66  CNQWNGPVCAWSFLLNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGG 125
                                         +  ++V     DGGRSSNAGIF+GGFVLGG
Sbjct: 67  ------------------------------RRPLSVQAAYSDGGRSSNAGIFVGGFVLGG 126

Query: 126 LIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 185
           LIVGTLGCVYAPQISK LAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID
Sbjct: 127 LIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 170

Query: 186 EVSAQLRTEDPPNGVAVNSDEVEPAL 212
           EVS+QLRT+DPPNGVAVNSDE+EPA+
Sbjct: 187 EVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Lag0036703 vs. NCBI nr
Match: XP_022975295.1 (uncharacterized protein LOC111474436 [Cucurbita maxima])

HSP 1 Score: 216.9 bits (551), Expect = 1.7e-52
Identity = 124/206 (60.19%), Postives = 141/206 (68.45%), Query Frame = 0


Query: 6   NFISQNLPSKIVLSGSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSNWFKQI 65
           + +S   P   + SGSNLKTA+K LGSVSPT+LLLNPGW        + +L+ S      
Sbjct: 7   SLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWV------GKAKLSTS------ 66

Query: 66  CNQWNGPVCAWSFLLNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGG 125
                                         +  ++V     D GRSSNAGIF+GGFVLGG
Sbjct: 67  ------------------------------RRPLSVQAAYSDSGRSSNAGIFVGGFVLGG 126

Query: 126 LIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 185
           LIVGTLGCVYAPQISK LAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID
Sbjct: 127 LIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 170

Query: 186 EVSAQLRTEDPPNGVAVNSDEVEPAL 212
           EVS+QLRT+DPPNGVAVNSDE+EPA+
Sbjct: 187 EVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Lag0036703 vs. ExPASy TrEMBL
Match: A0A6J1FC82 (uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC111442778 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.7e-53
Identity = 125/206 (60.68%), Postives = 142/206 (68.93%), Query Frame = 0


Query: 6   NFISQNLPSKIVLSGSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSNWFKQI 65
           + +S   P   + SGSNLKTA+K LGSVSPT+LLLNPGW        + +L+ S      
Sbjct: 7   SLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWV------GKAKLSTS------ 66

Query: 66  CNQWNGPVCAWSFLLNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGG 125
                                         +  ++V     DGGRSSNAGIF+GGFVLGG
Sbjct: 67  ------------------------------RRPLSVQAAYSDGGRSSNAGIFVGGFVLGG 126

Query: 126 LIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 185
           LIVGTLGCVYAPQISK LAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID
Sbjct: 127 LIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 170

Query: 186 EVSAQLRTEDPPNGVAVNSDEVEPAL 212
           EVS+QLRT+DPPNGVAVNSDE+EPA+
Sbjct: 187 EVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Lag0036703 vs. ExPASy TrEMBL
Match: A0A6J1IGB6 (uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 8.3e-53
Identity = 124/206 (60.19%), Postives = 141/206 (68.45%), Query Frame = 0


Query: 6   NFISQNLPSKIVLSGSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSNWFKQI 65
           + +S   P   + SGSNLKTA+K LGSVSPT+LLLNPGW        + +L+ S      
Sbjct: 7   SLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWV------GKAKLSTS------ 66

Query: 66  CNQWNGPVCAWSFLLNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGG 125
                                         +  ++V     D GRSSNAGIF+GGFVLGG
Sbjct: 67  ------------------------------RRPLSVQAAYSDSGRSSNAGIFVGGFVLGG 126

Query: 126 LIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 185
           LIVGTLGCVYAPQISK LAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID
Sbjct: 127 LIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 170

Query: 186 EVSAQLRTEDPPNGVAVNSDEVEPAL 212
           EVS+QLRT+DPPNGVAVNSDE+EPA+
Sbjct: 187 EVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Lag0036703 vs. ExPASy TrEMBL
Match: A0A6J1FTW3 (uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC111446794 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.4e-52
Identity = 126/206 (61.17%), Postives = 138/206 (66.99%), Query Frame = 0


Query: 6   NFISQNLPSKIVLSGSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSNWFKQI 65
           + I    P   + +GSNLKTA+KR GSVSPT LLLNPGW    +                
Sbjct: 7   SLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAK---------------- 66

Query: 66  CNQWNGPVCAWSFLLNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGG 125
                         L+ F            +  ++V     DGGRSS+AGIFIGGFVLGG
Sbjct: 67  --------------LSTF------------RRPLSVQAAYSDGGRSSSAGIFIGGFVLGG 126

Query: 126 LIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 185
           LIVGTLGCVYAPQISK LAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID
Sbjct: 127 LIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAID 170

Query: 186 EVSAQLRTEDPPNGVAVNSDEVEPAL 212
           EVS+QLRTED PNGVAVNSDEVEPA+
Sbjct: 187 EVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Lag0036703 vs. ExPASy TrEMBL
Match: A0A6J1IT36 (uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 7.1e-52
Identity = 124/199 (62.31%), Postives = 136/199 (68.34%), Query Frame = 0


Query: 13  PSKIVLSGSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSNWFKQICNQWNGP 72
           P   + +GSNLKTA+KR GSVSPT LLLNPGW    +                       
Sbjct: 14  PQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAK----------------------- 73

Query: 73  VCAWSFLLNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGGLIVGTLG 132
                  L+ F            +  ++V     DGGRSS+AGIFIGGFVLGGLIVGTLG
Sbjct: 74  -------LSTF------------RRPLSVQAAYSDGGRSSSAGIFIGGFVLGGLIVGTLG 133

Query: 133 CVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR 192
           CVYAPQISK LAG DRKDLMRKLPKFIYDEEKA+EKTRKVLAQKIEQLNSAIDEVS+QLR
Sbjct: 134 CVYAPQISKALAGTDRKDLMRKLPKFIYDEEKAVEKTRKVLAQKIEQLNSAIDEVSSQLR 170

Query: 193 TEDPPNGVAVNSDEVEPAL 212
           TED PNGVAVNSDEVEPA+
Sbjct: 194 TEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Lag0036703 vs. ExPASy TrEMBL
Match: A0A1S3BV81 (uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 3.5e-51
Identity = 122/199 (61.31%), Postives = 136/199 (68.34%), Query Frame = 0


Query: 13  PSKIVLSGSNLKTANKRLGSVSPTNLLLNPGWAVNNQGPNQFELNQSNWFKQICNQWNGP 72
           P   +  GSNLKT +KRLGS+SPT+L+L+PGW    +                       
Sbjct: 14  PQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAK----------------------- 73

Query: 73  VCAWSFLLNEFWFGAMPPSESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGGLIVGTLG 132
                  L+ F            +  ++V     DGGRSSNAGIFIGGFVLGG+IVGTLG
Sbjct: 74  -------LSTF------------RRPLSVQAAYSDGGRSSNAGIFIGGFVLGGIIVGTLG 133

Query: 133 CVYAPQISKTLAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR 192
           CVYAPQISK +AGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR
Sbjct: 134 CVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR 170

Query: 193 TEDPPNGVAVNSDEVEPAL 212
            EDPPNGVAVNSDEVE A+
Sbjct: 194 PEDPPNGVAVNSDEVESAI 170

[Close]

BLAST of Lag0036703 vs. TAIR 10
Match: AT1G42960.1 (expressed protein localized to the inner membrane of the chloroplast. )

HSP 1 Score: 159.8 bits (403), Expect = 2.3e-39
Identity = 78/102 (76.47%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 107 DGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKAL 166
           D   S + G+F+GGF+LGGLIVG LGCVYAPQISK +AGADRKDLMRKLPKFIYDEEKAL
Sbjct: 64  DDDGSGSTGLFVGGFILGGLIVGALGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKAL 123

Query: 167 EKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVE 209
           EKTRKVLA+KI QLNSAID+VS+QL++ED PNG A+++DE+E
Sbjct: 124 EKTRKVLAEKIAQLNSAIDDVSSQLKSEDTPNGAALSTDEIE 165

[Close]

BLAST of Lag0036703 vs. TAIR 10
Match: AT5G16660.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 4.1e-12
Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 107 DGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKAL 166
           DG RS ++G FI GF+LGG + G +  ++APQI +++   + +    K  +  Y +E  L
Sbjct: 61  DGSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDE-GL 120

Query: 167 EKTRKVLAQKIEQLNSAIDEVSAQLR 193
           EKTR+ L +KI QLNSAID VS++LR
Sbjct: 121 EKTRETLNEKIGQLNSAIDNVSSRLR 145

[Close]

BLAST of Lag0036703 vs. TAIR 10
Match: AT5G16660.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 4.1e-12
Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 107 DGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKDLMRKLPKFIYDEEKAL 166
           DG RS ++G FI GF+LGG + G +  ++APQI +++   + +    K  +  Y +E  L
Sbjct: 59  DGSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDE-GL 118

Query: 167 EKTRKVLAQKIEQLNSAIDEVSAQLR 193
           EKTR+ L +KI QLNSAID VS++LR
Sbjct: 119 EKTRETLNEKIGQLNSAIDNVSSRLR 143

[Close]

BLAST of Lag0036703 vs. TAIR 10
Match: AT3G02900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10
Identity = 35/102 (34.31%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 91  SESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKD 150
           ++S   H ++V      G +   +  F+ GF+LG  + GTL  ++APQI +++   +   
Sbjct: 36  TKSNRSHKLSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYG 95

Query: 151 LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR 193
             +      YDE   LE+ R++L +KI QLNSAID+VS++L+
Sbjct: 96  FKKPEQPMYYDE--GLEERREILNEKIGQLNSAIDKVSSRLK 135

[Close]

BLAST of Lag0036703 vs. TAIR 10
Match: AT3G02900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1). )

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10
Identity = 35/102 (34.31%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 91  SESEPQHFVAVCTLLCDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKTLAGADRKD 150
           ++S   H ++V      G +   +  F+ GF+LG  + GTL  ++APQI +++   +   
Sbjct: 35  TKSNRSHKLSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYG 94

Query: 151 LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR 193
             +      YDE   LE+ R++L +KI QLNSAID+VS++L+
Sbjct: 95  FKKPEQPMYYDE--GLEERREILNEKIGQLNSAIDKVSSRLK 134

The following BLAST results are available for this feature:

BLAST of Lag0036703 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900139.1	4.1e-54	66.67	uncharacterized protein LOC120087268 [Benincasa hispida]	[more]
KAG6591206.1	1.2e-53	61.65	hypothetical protein SDJN03_13552, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7037964.1	1.6e-53	62.09	hypothetical protein SDJN02_01597, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022936063.1	3.5e-53	60.68	uncharacterized protein LOC111442778 [Cucurbita moschata]	[more]
XP_022975295.1	1.7e-52	60.19	uncharacterized protein LOC111474436 [Cucurbita maxima]	[more]

BLAST of Lag0036703 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0036703 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FC82	1.7e-53	60.68	uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC1114427...	[more]
A0A6J1IGB6	8.3e-53	60.19	uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436...	[more]
A0A6J1FTW3	2.4e-52	61.17	uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC1114467...	[more]
A0A6J1IT36	7.1e-52	62.31	uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366...	[more]
A0A1S3BV81	3.5e-51	61.31	uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=...	[more]

BLAST of Lag0036703 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G42960.1	2.3e-39	76.47	expressed protein localized to the inner membrane of the chloroplast.	[more]
AT5G16660.1	4.1e-12	45.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16660.2	4.1e-12	45.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02900.1	1.7e-10	34.31	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02900.2	1.7e-10	34.31	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 163..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..211
None	No IPR available	PANTHER	PTHR34048:SF9	SUBFAMILY NOT NAMED	coord: 9..47
None	No IPR available	PANTHER	PTHR34048	LOW-DENSITY RECEPTOR-LIKE PROTEIN	coord: 65..210 coord: 9..47
None	No IPR available	PANTHER	PTHR34048:SF9	SUBFAMILY NOT NAMED	coord: 65..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0036703.1	Lag0036703.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane