Lag0036672 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0036672
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein TOPLESS
Location	chr2: 303869 .. 309554 (-)
RNA-Seq Expression	Lag0036672
Synteny	Lag0036672

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAGCGAATGATGCAAGATCTGACAGCTCTTGATCAAAGTCATCTCTCATCTCTTGGAGACCTTGAGGTCACCAGAGAAATCATATACATCATCCAAGCGCCCGAGGAAGAATTTCACAAGTACTGGGATCACTTCAATGAGTTATGTGCGCTTCCTCATCGCCCACTATACGAGGAGTCCTTACTTTGCACTTCATTGAGGTACTAGCATCTGACGATAGAAGGATCTTGGATATAGCGAGTGGTGGTGATGTGTTGGATAAAACACCCAGTGAGGCTAGAGAGATAATTTCGATCTTGACAGCGTATGTTGGACTCATCATATGGCATACACGAAAGGTAAATTCTTCCCATTTCTTGGTTAGTTAAGATTCTGAGCAACAAACAACAAAAAGGTAAGTATGATGAGGTCAGTAAGTCTGAGCTTGAGCCTTCTTTATACTCTGAGTCTGATTCTTCTGATTCCCCTTGCATTATAGGAGAGATGGAAATAGTTGATGAATTAGCTTTGGTCGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTAAATTGCATGAGTTAGATTTTGTAATTCCAATAGCTAACCAGTTTGTTGCTCAATATAAATGTGTTTTGATTAATATGTTGGGGATGATGACGAATTGCTTGTTTGAATTTTCTCATTCTTTGCACTCTGTGTGCCAATTTAATTTGTCTGTGCAGGAGCTGATAAAAAAGAAGATAAAGAAGAAGGATGTAATGAAAATCAAAGAGATCGATTTCGAATGAAAAGCGAGGAGAATCTTGTCGAGGAAACAACCTTAAACATTTGCACCGAATAAGGTTATTGCTTTCTGTCATTTCTTTTCTTAGTTTATGTTATTTTGATTAGTTGCTTTTGATTCTTGTTTGATTGTTTTGTTTCTTTTTAGGATTGGTGGTACCAAAGCGAGCCCTTTTATTTGTATGTAAACGCGATTCTCCACCCACGAGCTTTAATTCGGGGAAGTTTCTATTCTTTTCTTATGCATTTGTCCTGTTTTACATGATCTATTACATTGAGGACAATGTACCTTTTAGGTTGGGGGTGGGGTATTCTGCTTTAGTTTCTGATGGCCCTGAGCATCTGTGCGTCGGGCCAGCGTTTGTGCTTAATGTATATCTTGCATGCCTGCTGTGTATATATTTGCTTTAGTGATAATGATTTCCTAGGATTAGCCCTGATCATCTGTGCGTCGGCCCAACGTTTGTGCTTAATGTATTTCTTGCATGCCTGTTGTGTATATATTTGCTTTAGTGATAATGATTTTCTAGGATTGGCTCAAATTTTTCGAAAATTTATAGCTTTCGATGAGTTGTGATCATGAGTGCCCCAAAAGGGAGTCTTTTTAAAACTTTTCTTGGACATGTCTTGCACAGGTTGGGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAGGTTTTGTGAGAAAGTCTACTTTTTTTGCAACCTAGGTTGTTTCATTTAGACTTTTTAGCAAGATCTTAGTGCCAGTGTAGGGGGAAGATAGGATGAGAGTTTAGTAAACCAATCTCGGGTTAGTAAAGTCTTCTTTAGGTGGGATAGAAACTCTTTGTGCAAGATTGTCTTTGGAAACTTTTGATTTGTCTCCTGATTGCTTAGGTTTTTGAATGTTTGAGCTTGAGGATTAAATCACTTTACACTTGTATGCACAACATCTTTTCTTTGGTTTGTGTGTGTCTTGCTCGATGACTAGCAAGATTTAGGTTGGGGGTTTTTGATAGCACCCAATTCGTGCTATTTAAGTAAATTCCTTTCTAATCGATGTGATAAAGTAACTGTAGTTAGATATTTTTTCCTTGCTTTCTTTTATTTGTGTTGCGTAGGTTTCCTTGCAATTAAAAGGAACTTGAGGCATTTGCTACTAATATGAATGCCTAAGGAACTTGAGGCATTTGCATTTCCTTGCTTTCTTTTATTTGGGTCTTGAATTTGCTGTGATGTGTATTAAATTTTTGTTTGTTCTTACTGCCTCTTACTTTTGTCATATAATGAAGGTAAATCTACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACATCAAACCAAGGGTCATCTCCAATGTGCATGGATTTTCATCTAGTCCAACAAACTCTGCTATTGGTATATACAAATTTATTTTGTATAATTTTATTTTTTTGGTTTTAAGCTACCAATAGAACAATGTAGTTGTAGATGGTATGTTTCTTTATTTTGATATTCACATTAAAATTGATAAGTAATGAAGAAAATTCTGTTTTCAGTTGGCACAAATGTAGGTAAAATAGGATTGTGGGAAGTTGGAGCCTTGATGGTGCATTGTCTGGTAAGATTGTATGTTTACTTTAGTCAATGAAAATCAAAGAGATCGATTTCAGATGAAAACGAGGAGAATCTGGTCGAGGAAACGACCTTAAACATTTGCACCGAATAAGGTTACTGTTTTTGTCATTTCTTTTCTTAGTTTATGTTATTTTGATTAGTTGCTTTTGATTCTTGTTTGATTGTTTTGTTTCTTTTTAGGATTGGCGGTACCAAAGCGAGCCCTTTTATTTGTATGTAAACATGATTCACCACCCACGAGCTTTAATTCAGGGAAGTTTCTATTCTTTCCTTATGCATTTGTCCTTTTTACATGATCTATTACATTGAGGACAATGTAACCTTTTAGGTTGGGGGTGGGGTATTCTGCTTTAGTTTCTGATGGACCCTGAGCATCTGTGCGTCGGGCCGGCGTTTGTGCTTAATGTATATCTTGTATGCCTGTTGTGTATATATTTGCTTTAGTGATAATGATTTCCTAGGATTAGCCCTGATCATCTGTGCGTCGGCCCAACGTTTGTGCTTAATGTATATCTTGCATGCCTGTTGTGTATATATTTGCTTTAGTGATAATGATTTTCTAGGATTGACTCAAATTTTTCGAAAACTTATAGCTTTCGTTGAGTTGTGATCATGAGTGCCCCAAATGGGAGTCTTTTTAAAACTTTTCTTGGACATGTCTTGCACAAGTTGGGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAGGTGTTGCGAGAAAGTCTAAATTTTTGCAAAATAGTGTGTGGAGTCTTGCCTAGGAGAGAAAAAAAAATACGCCTGCCAATTCCGGAAATTGCGTATTCAATTCAATGATGCATTACATTAACAAATACATTACTTATTTGAGTAATTCCATTATTATTTATTTAATTTATAAATATAAATTAATTAATAAATAATTTATTATATTTATAAGAATAAGAATAATTTATTATGTTTCAGGCACCTAGGCAAGGAGGAAGCAACCTAGTTTGTTCAATTTAGGCTTTTTAGCAAGACCTTAGTGCCAGTGTAGGGGGAAGATAGGATGAGAGTTTAGTAAACCAATCCCGGGTTAGTAAAGTCTTCTTTAGGTGGGATAGAACTCTCTTGTGCAAGATTGTCTTTGGAAACTTTTGACTTGTCTCCTCATTGGGTCTCATGCAATGTCTCTTGATCGGAGGTTTTTGAATGTTTGAGCTTTGAGGATTAAATCACTTTACTCTTATATGCATTCTTTTGTTTGTGTGTGTCTTGCTTGAGGACTAACGATATTTAGATTGGGGGTATTTGATAGCTCCTGATTCGTGCTATTTTAGTTAAATTCCTTTTTAATCGATGTGATAAAGTAACTTTAGTTAGGTATTTTTTCCTTGCATTTGCTACTAATATGAATCTCTAAGGAACTTGATGCATTTGCATTTCCTTGCTTTCTTTATTTGGCCGGGATAAAGGTAGTTTGATTCTATGTTCAATTAATGTGACTTTTAACCATGTTAACTCTTTTGCTTAATATCTAATTAACTTATATTTAATTTTTGCAGCCCACAGTAAATCCAATTTCAACTGCTACTAGTAGTGTAGGCCTTGCTGAGAGAGCATAGAGGTGCCTCTGTCATTAGTATAGCTAGAGTGGTTGGTGTTGCTAAGTAGAAAATTGATGATTTTTATAGGAGATTGTTTATTTTAATGCCCCTTGCATGTATGAATAAATCATGAAACAATTAATTCACACATATATATAATAAAGAAACAGGATTTTCATTAAGAAAATGAAAGGGAGAACAAGGTCATACTAAAAACAAGTCCCAAAAACTAAATACAAGCCTGCTAACAAAAGCCCCAATAACTAATTATATAAACGAATTTGTTAAAAAAAAATTACAAGAACGAATCTCGAAACAAAGAATGAGCTCCAAAAACTAATTGTCTCCCCTTTATCATGTTGCAATTTATTGTCAAAATAAGAATGAATCGGAGAAACTCATTTTATAAATATGATTGAGACTACTGAAAATTTGTTGTAAATGGAATTAAGAGTTTAATTAGTTGGGTTGTCATAACCAACATGTCATTGTGGAGACATTTTGGTTTCATGAAAATTTGAGAATTGTTTTTATAGATAAGTGCATATTTGGAGAGGTGTTTATTTTGAGCTTTCGGTTGCAGCTTAAGATTTTCTTAGGATCCCTTGCTACTTCCTTCTCTGACCTATGCCTCTTGTTCATGCTTTTCAGATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACTGCTATGGAAATAGACGCGAACTGATTCAACCGGCAAGGTATCATATAATGTTATGTTATTAGTTTCTGTCTGTCATTGGAGCCCTTTCCTTAGACATCGTACTCTAAATTTCCATTGTACGTACATAATCAGTACTTTACCTTCTGATCCAGCTTTGCATGTTGAACTCTGATGTGATTCTTGGAACTTCCAATGGGAGGCTATCATCATTATCATCACAGTTCAACATCGTGTACAGTTTCACAAGGACGAGATGCACTTTCTAGTTGTGCAGACTCAGGTTGCAACATATGAGACAACAAAACTTTACTGTGTAAACAGGTCTTTCTTTTACCCCATTTTTTGTTCGTTTATTTGTTTTTTGTTTTGGAAGTAATGTCTTACCTCTTTTCCTTTGTCGATTCACATTTTAGTGGATGCCACATGAATCTGCACACCAATCTCTCACCCAACATGAGGTATTTCTCTAATCCTACTTTGTAGTTCACTAGTTTGGTTATATTCTCCTGCTTTGAAGAATTTTGCTATCATGAGCTCTTAGAATGGACATATGACAACTTGATCTGTAGATGGTTTATTCTCGTACAATCACATGCTCCTGTGTCAAATATTGATCAAGTTGTGATTGCTGTATTTTTCTTTTATTTCAAAAAACATAGGGATATGATAGGGATTTATATTACGATATATCTATACAAGATTCATTTGTAGGTGATAGGAAAACGAGAGTACTAACACATTTCATTGATATGACATAGATACAAAAAGGCCTATCGGTGTCGGGAAAGATGGAGAAGGGATATGATATCACCCTGGTCGAACAAAAAGCCATCCAAATCACTTTCGAATATGTCTCGAAAGCTGATGCAAAGGTGCGCTGCTGA

mRNA sequence

ATGGCTGAGCGAATGATGCAAGATCTGACAGCTCTTGATCAAAGTCATCTCTCATCTCTTGGAGACCTTGAGGTCACCAGAGAAATCATATACATCATCCAAGCGCCCGAGGAAGAATTTCACAAGTACTGGGATCACTTCAATGAGTTATGTGCGCTTCCTCATCGCCCACTATACGAGGAGTCCTTACTTTGCACTTCATTGAGCGTATGTTGGACTCATCATATGGCATACACGAAAGGAGAGATGGAAATAGTTGATGAATTAGCTTTGGTCGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTAAATTGCATGAGTTAGATTTTGTAATTCCAATAGCTAACCAGTTGGGGGTGGGGTATTCTGCTTTAGTTTCTGATGGCCCTGAGCATCTGTGCGTCGGGCCAGCGTTTGTGCTTAATGTTGGGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACATCAAACCAAGGGTCATCTCCAATGTGCATGGATTTTCATCTAGTCCAACAAACTCTGCTATTGATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACTGCTATGGAAATAGACGCGAACTGATTCAACCGGCAAGATGGTTTATTCTCGTACAATCACATGCTCCTGTGTCAAATATTGATCAAGTTGTGATTGCTATACAAAAAGGCCTATCGGTGTCGGGAAAGATGGAGAAGGGATATGATATCACCCTGGTCGAACAAAAAGCCATCCAAATCACTTTCGAATATGTCTCGAAAGCTGATGCAAAGGTGCGCTGCTGA

Coding sequence (CDS)

ATGGCTGAGCGAATGATGCAAGATCTGACAGCTCTTGATCAAAGTCATCTCTCATCTCTTGGAGACCTTGAGGTCACCAGAGAAATCATATACATCATCCAAGCGCCCGAGGAAGAATTTCACAAGTACTGGGATCACTTCAATGAGTTATGTGCGCTTCCTCATCGCCCACTATACGAGGAGTCCTTACTTTGCACTTCATTGAGCGTATGTTGGACTCATCATATGGCATACACGAAAGGAGAGATGGAAATAGTTGATGAATTAGCTTTGGTCGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTAAATTGCATGAGTTAGATTTTGTAATTCCAATAGCTAACCAGTTGGGGGTGGGGTATTCTGCTTTAGTTTCTGATGGCCCTGAGCATCTGTGCGTCGGGCCAGCGTTTGTGCTTAATGTTGGGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACATCAAACCAAGGGTCATCTCCAATGTGCATGGATTTTCATCTAGTCCAACAAACTCTGCTATTGATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACTGCTATGGAAATAGACGCGAACTGATTCAACCGGCAAGATGGTTTATTCTCGTACAATCACATGCTCCTGTGTCAAATATTGATCAAGTTGTGATTGCTATACAAAAAGGCCTATCGGTGTCGGGAAAGATGGAGAAGGGATATGATATCACCCTGGTCGAACAAAAAGCCATCCAAATCACTTTCGAATATGTCTCGAAAGCTGATGCAAAGGTGCGCTGCTGA

Protein sequence

MAERMMQDLTALDQSHLSSLGDLEVTREIIYIIQAPEEEFHKYWDHFNELCALPHRPLYEESLLCTSLSVCWTHHMAYTKGEMEIVDELALVDSMSISISPELTSPKLHELDFVIPIANQLGVGYSALVSDGPEHLCVGPAFVLNVGCLSCLRVGLECLGASYLAHIPVVTPIGVNLPVNVLPVSFADHGHDLPKTVMRTSNQGSSPMCMDFHLVQQTLLLISMLIYTNSGSAILALASNAFHCYGNRRELIQPARWFILVQSHAPVSNIDQVVIAIQKGLSVSGKMEKGYDITLVEQKAIQITFEYVSKADAKVRC

Homology

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BLAST of Lag0036672 vs. NCBI nr
Match: RAL41375.1 (hypothetical protein DM860_010169 [Cuscuta australis])

HSP 1 Score: 83.2 bits (204), Expect = 4.5e-12
Identity = 58/136 (42.65%), Postives = 70/136 (51.47%), Query Frame = 0


Query: 116 PIANQLGVGYSALVSDGPEHLCVG--PAFVLNVGCLSCLRVGLECLGASYLAHIPVVTPI 175
           P  N   V    + S GP  LC    PA + +    +   V    + + +++  P    I
Sbjct: 258 PTVNHPAVSGGPMGSAGPMGLCASSIPAALKHPRAPTANPVDYPTVDSDHVSKRPRSLGI 317

Query: 176 G--VNLPVNVLPVSFADHGH------------DLPKTVMRTSNQGSSPMCMDFHLVQQTL 235
           G  VNLPVNV+PVSF  HGH            DLPKTV+RT NQGSSPM MDFH VQQTL
Sbjct: 318 GDEVNLPVNVMPVSFPGHGHSSSQGGHSSAHDDLPKTVVRTLNQGSSPMSMDFHPVQQTL 377

[Close]

BLAST of Lag0036672 vs. NCBI nr
Match: XP_022153396.1 (protein TOPLESS [Momordica charantia])

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-11
Identity = 45/63 (71.43%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 172 PIG----VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTL 223
           PIG    VNLPVNVLPVSFA HGH        DLPKTV+RT NQGSSPM MDFH VQQTL
Sbjct: 310 PIGMSDEVNLPVNVLPVSFAGHGHAQAFNAPDDLPKTVIRTLNQGSSPMSMDFHPVQQTL 369

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BLAST of Lag0036672 vs. NCBI nr
Match: XP_038896551.1 (protein TOPLESS [Benincasa hispida] >XP_038896555.1 protein TOPLESS [Benincasa hispida])

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-11
Identity = 42/56 (75.00%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 175 VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           VNLPVNVLPVSFA HGH        DLPKTVMRT NQGS+PM MDFH VQQTLLL+
Sbjct: 317 VNLPVNVLPVSFAGHGHAQTFNAPDDLPKTVMRTLNQGSNPMSMDFHPVQQTLLLV 372

[Close]

BLAST of Lag0036672 vs. NCBI nr
Match: XP_023523502.1 (protein TOPLESS [Cucurbita pepo subsp. pepo])

HSP 1 Score: 80.5 bits (197), Expect = 2.9e-11
Identity = 42/56 (75.00%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 175 VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFH VQQTLLL+
Sbjct: 317 VNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLV 372

[Close]

BLAST of Lag0036672 vs. NCBI nr
Match: TYK29594.1 (protein TOPLESS [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 2.9e-11
Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 175 VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLISMLI 227
           VNLPVNVLPVSFA HGH        DLPKTVMRT NQGSSP  MDFH +QQTLLL+  ++
Sbjct: 317 VNLPVNVLPVSFAGHGHAQTFNAPDDLPKTVMRTLNQGSSPKSMDFHPIQQTLLLVGTIV 376

[Close]

BLAST of Lag0036672 vs. ExPASy Swiss-Prot
Match: Q94AI7 (Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.8e-09
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 175 VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           VNL VN+LP+SF+   HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Sbjct: 316 VNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373

[Close]

BLAST of Lag0036672 vs. ExPASy Swiss-Prot
Match: Q0WV90 (Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3)

HSP 1 Score: 60.5 bits (145), Expect = 4.1e-08
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 175 VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           V+L VN+LP++F    HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Sbjct: 316 VSLGVNMLPMTFPGQAHGHNQTFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373

[Close]

BLAST of Lag0036672 vs. ExPASy Swiss-Prot
Match: Q10NY2 (Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.6e-07
Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 168 PVVTPIGVNLPVNVLPVSF-ADHGH---DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           PV     VNLPVN+LPV++   H +   D  K V RT +QGS+PM MDFH VQQTLLL+
Sbjct: 310 PVGMSEEVNLPVNMLPVTYPQSHSYPQDDFHKNVARTLSQGSTPMSMDFHPVQQTLLLV 368

[Close]

BLAST of Lag0036672 vs. ExPASy Swiss-Prot
Match: Q27GK7 (Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06
Identity = 29/55 (52.73%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 176 NLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           NLPVNVLPV++    H        DLPK V R  +QGS+   MDFH VQQT+LL+
Sbjct: 321 NLPVNVLPVTYPGQSHAHATYSTDDLPKNVSRILSQGSAIKSMDFHPVQQTMLLV 375

[Close]

BLAST of Lag0036672 vs. ExPASy TrEMBL
Match: A0A328D6M3 (Uncharacterized protein OS=Cuscuta australis OX=267555 GN=DM860_010169 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-12
Identity = 58/136 (42.65%), Postives = 70/136 (51.47%), Query Frame = 0


Query: 116 PIANQLGVGYSALVSDGPEHLCVG--PAFVLNVGCLSCLRVGLECLGASYLAHIPVVTPI 175
           P  N   V    + S GP  LC    PA + +    +   V    + + +++  P    I
Sbjct: 258 PTVNHPAVSGGPMGSAGPMGLCASSIPAALKHPRAPTANPVDYPTVDSDHVSKRPRSLGI 317

Query: 176 G--VNLPVNVLPVSFADHGH------------DLPKTVMRTSNQGSSPMCMDFHLVQQTL 235
           G  VNLPVNV+PVSF  HGH            DLPKTV+RT NQGSSPM MDFH VQQTL
Sbjct: 318 GDEVNLPVNVMPVSFPGHGHSSSQGGHSSAHDDLPKTVVRTLNQGSSPMSMDFHPVQQTL 377

[Close]

BLAST of Lag0036672 vs. ExPASy TrEMBL
Match: A0A6J1DKI7 (protein TOPLESS OS=Momordica charantia OX=3673 GN=LOC111020907 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.3e-12
Identity = 45/63 (71.43%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 172 PIG----VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTL 223
           PIG    VNLPVNVLPVSFA HGH        DLPKTV+RT NQGSSPM MDFH VQQTL
Sbjct: 310 PIGMSDEVNLPVNVLPVSFAGHGHAQAFNAPDDLPKTVIRTLNQGSSPMSMDFHPVQQTL 369

[Close]

BLAST of Lag0036672 vs. ExPASy TrEMBL
Match: A0A1S3BY14 (protein TOPLESS OS=Cucumis melo OX=3656 GN=LOC103494671 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-11
Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 175 VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLISMLI 227
           VNLPVNVLPVSFA HGH        DLPKTVMRT NQGSSP  MDFH +QQTLLL+  ++
Sbjct: 317 VNLPVNVLPVSFAGHGHAQTFNAPDDLPKTVMRTLNQGSSPKSMDFHPIQQTLLLVGTIV 376

[Close]

BLAST of Lag0036672 vs. ExPASy TrEMBL
Match: A0A6J1KEV5 (protein TOPLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111492626 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-11
Identity = 42/56 (75.00%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 175 VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFH VQQTLLL+
Sbjct: 317 VNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLV 372

[Close]

BLAST of Lag0036672 vs. ExPASy TrEMBL
Match: A0A5A7TRI4 (Protein TOPLESS OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002030 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-11
Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 175 VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLISMLI 227
           VNLPVNVLPVSFA HGH        DLPKTVMRT NQGSSP  MDFH +QQTLLL+  ++
Sbjct: 317 VNLPVNVLPVSFAGHGHAQTFNAPDDLPKTVMRTLNQGSSPKSMDFHPIQQTLLLVGTIV 376

[Close]

BLAST of Lag0036672 vs. TAIR 10
Match: AT1G15750.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-10
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 175 VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           VNL VN+LP+SF+   HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Sbjct: 316 VNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373

[Close]

BLAST of Lag0036672 vs. TAIR 10
Match: AT1G15750.2 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-10
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 175 VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           VNL VN+LP+SF+   HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Sbjct: 316 VNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373

[Close]

BLAST of Lag0036672 vs. TAIR 10
Match: AT1G15750.3 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-10
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 175 VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           VNL VN+LP+SF+   HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Sbjct: 316 VNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373

[Close]

BLAST of Lag0036672 vs. TAIR 10
Match: AT1G15750.4 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-10
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 175 VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           VNL VN+LP+SF+   HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Sbjct: 316 VNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373

[Close]

BLAST of Lag0036672 vs. TAIR 10
Match: AT1G80490.1 (TOPLESS-related 1 )

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-09
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 175 VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI 223
           V+L VN+LP++F    HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Sbjct: 315 VSLGVNMLPMTFPGQAHGHNQTFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 372

The following BLAST results are available for this feature:

BLAST of Lag0036672 vs. NCBI nr


Match Name	E-value	Identity	Description
RAL41375.1	4.5e-12	42.65	hypothetical protein DM860_010169 [Cuscuta australis]	[more]
XP_022153396.1	1.3e-11	71.43	protein TOPLESS [Momordica charantia]	[more]
XP_038896551.1	1.7e-11	75.00	protein TOPLESS [Benincasa hispida] >XP_038896555.1 protein TOPLESS [Benincasa h...	[more]
XP_023523502.1	2.9e-11	75.00	protein TOPLESS [Cucurbita pepo subsp. pepo]	[more]
TYK29594.1	2.9e-11	68.33	protein TOPLESS [Cucumis melo var. makuwa]	[more]

BLAST of Lag0036672 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AI7	2.8e-09	60.34	Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1	[more]
Q0WV90	4.1e-08	56.90	Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3	[more]
Q10NY2	2.6e-07	55.93	Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1	[more]
Q27GK7	2.2e-06	52.73	Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2	[more]

BLAST of Lag0036672 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A328D6M3	2.2e-12	42.65	Uncharacterized protein OS=Cuscuta australis OX=267555 GN=DM860_010169 PE=4 SV=1	[more]
A0A6J1DKI7	6.3e-12	71.43	protein TOPLESS OS=Momordica charantia OX=3673 GN=LOC111020907 PE=4 SV=1	[more]
A0A1S3BY14	1.4e-11	68.33	protein TOPLESS OS=Cucumis melo OX=3656 GN=LOC103494671 PE=4 SV=1	[more]
A0A6J1KEV5	1.4e-11	75.00	protein TOPLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111492626 PE=4 SV=1	[more]
A0A5A7TRI4	1.4e-11	68.33	Protein TOPLESS OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00203...	[more]

BLAST of Lag0036672 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15750.1	2.0e-10	60.34	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.2	2.0e-10	60.34	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.3	2.0e-10	60.34	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.4	2.0e-10	60.34	Transducin family protein / WD-40 repeat family protein	[more]
AT1G80490.1	2.9e-09	56.90	TOPLESS-related 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR44083:SF10	PROTEIN TOPLESS-LIKE ISOFORM X1	coord: 175..222
IPR027728	Topless family	PANTHER	PTHR44083	TOPLESS-RELATED PROTEIN 1-RELATED	coord: 175..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0036672.1	Lag0036672.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048731	system development