Lag0036658 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0036658
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr2: 209409 .. 217187 (-)
RNA-Seq Expression	Lag0036658
Synteny	Lag0036658

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCAGATGTCTGGTGTTCAAATCCTGTTCGGCAAGACGCTAAACTTGGGGCACAACACAATACACCCAAAAACACGTAAATGGGAGGGTCGACGACATAATCATAAAGTAACTCATAACTCATTAAGATTCTACCCATGTAGTCAAGGGGGAAAGGGTTATATCAGCAAGAAAAGAGTCACCCATTCCCATCATAGCTGAAAACTTTGAAGGACATTCTTCTTTGAGAATCTCTCATATTTCTTGAGATGAATGTAGGTGGATAACGCTGGCTGCTGTCTCATTTGATAACGAGAATCCAAGAGACTACAATGATATTGTCGTGGATCCACAGATTTACCAAGGGATCATTTCTTGACGGACATGCCAAGATGCTATAATAATCCAACAGAGTTCTTCATGGAAATTGGAAAGTACGATCTGATACTAAGTTCTATACACGTAAGAAATAGAGATAAGGGTAGTCGAACTACATAGTACACGTCTACACGATGACTGAGCACTGATGTGCTGTGATCTTTTGGGCGTGCCTTGCTGTGGTTTTGTCGGCCCAAGTCTGCTAGTTAGAATTTTGTTGAGCATTGCTGTTGAGGGGAAGCCTTTTAAGGGCGTTTATGAGGGAAGGGGGGCACTTTTTTGAATTTCCTTGGTAAACTCATTTTCTGAGTGGTCTTGGAGGGAGGGGAGCTCTCGAAACTCCCTCGTCATTGTCAAAATAGTTTATAAATAAATCAAGGTTTATCACTATCTTCATGGTTTGACTTTGACCACAGGAAATGAAGTTTCTCCAGTTGATGGGTGGGGAACAAGCACCAACCCTAGATTATCAGAATGGTTGATGTAAAGGGGATTGATGGAGGCGTCATCCACTATATAGTTATTTGCAATTGAGTAGGGTTTAATTGTAATTAGACAAGATTTTTTGGATGCCCTTAGAACTCCAGGAGTAAATTCCTGGAGAATCATATCTTTTCAAGTTGGCTGGCTGGTCTAATCTTTTGATACAGTGGGCAATTGAGTAGGGTTTAATTGTAATTAGACAAGATTTTTTGGATGCCCTTAGAATTCCGGGAGTAAATTCCTGGAGAATCATATCTTTTCAAGTTGGCTGGTCTAATCATTTGATACAATGGAGAAGGTCATGCTGCCCATAAAAGAAAAGGTAGAAGTAGAACTATGATGGTGAGAACATGTAGTTGGCTAGCACTGTTGTGATACCACATTCAGGCGAAGAAAGCTTTGGAAACTGACTTTCAATTATTATCACGAAAGTGCCTTACAAGAAAGTATGAATATAGTCAAACGTCTAGCCAGCTCATAACAGAATGAAGGACCTGACTAAAACTAAGTAAAAAAACTAACAACATTTAGTTAATAAAAGTGATATGTTTTTCGTGGCAGAGTCACCTTGCTGCTACGGTCCACTTTGTAAAAATGGAAATATTTTCCATTTTTTCTCTTTATTATTATTATTTTTTATAACATTCGTGAGTGCTTAAATCAACTTATGCATACCTCAACTATTTTCACGGAATAATCGCTTGACTCTACTATATTTGGTTGGGAAGGAAACTTAAAGAATATTAAATTTTAGGCAAAGTTCTTTGTTATTTACCTTGACACTTAGTGACCACTAGGCCTACCCATTGTAGATGTTTGTTTAATTTTTGAAGTTTCATGGTAGAATTGAGCCAGCAGTATTTCTTCAATATTCATTTCATTTGAATTTCCTTTTAGATTTCCTATGTTCCTCTTGAATTGTGTCCATTGTTTTTATGTATCCTGGTTCCTGACAAACAGCCTATGATTATTTTTCTACATCTATCTTCTGCTACAAATGTAAGTTCATCTAAGAATCAAGAAAGGATGTACAACTAAGAACTTTGAAGTGATGACATGGACATTTCTGCAAATGGTTTCAAATTCTCATGCCATAAAAGGATTCTGAGATATGCAATCTTTACTTTCATGTAGAATTTATTCTCTAGTATCTTTCACATTCTGCAATTTTTTTGTCTTTTCATTTTTCATTTTTGGGATTGAGTACATGGCTGCGATTGCTTGTACTAATTTACATAGTATTGGATGTGGTATTATGAATTATTGTTTTCCTAACTGTGAATGTCCAACAGCCAGGAAAAATATAAACGAATAGTACATTTGAATCTAATAGCATCACCATTCTATTGGTGAATAATTGCAGCTCATGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCAATTCCATATGATTATCCAAAATATCTGTCAGGTGAACTGCCGGGTGATTATGGATTCGATATTGCTGGTCTGAGCAAGGATCCCGTGGCTTTCCAGAAGTACTTCAAGTATATTAAGCTTTTTTTAGCCTAAATTTTTCTTCATCATTTCCTTTTTACCCCAATATCTGGAAACCATGAGTAGATTTATTAGTGCATACCATAAGAGAATATGATTATTTGATTTGTGAGTGGCCGGTAGACAAAGGGACAACGTAATGATGATTATCTTTATTTATATATATATATATATATATATATATATAAGAAACATCAAGGATATATATATTAAACACAAAAGAAGCTGACAGCCTAAGGGCCGAGGGTGGAGATCACCCTCGCCCGAAAGCTAATACAAAAGAGCTTGCCAATCTTTAATAATCGTTAGCAAACTGTAATTACAATTTTTTTTTTTGTGTAAAGATATCCACCAAGATACTGTATTTTGCATGTTATCAAAAAAGAAATCAAAGCTAATAGACTTATATTTAAAGGTTCTAGTGTTCCTTTCCTTCCACAAAAGCCATAAAGTAGCCCTAAAAGCACAGCTAGCCATAATGATGATTATCAATGCAGATAAGCTGGGAGAGTTATGAAATGATCCTGCAGAACATAATATAGACATCACCTTAAGCTGATCCCTGAATATTTATCCAATTATCCACATATTTGTTAGCTATGATACATAACTTGCATAATGCAAGCTTGCTATCCAACTTTGAAGATATTTGAGCTAGTCCATATAAAATATAACTTTGCAGTCCTAAATTATCTTAGATAAGCAACTCTTATTGTATGTATATATTTGGTAAAAAATCACTTTTCGTCCCTAAACTTTCATGAAGGTATCAATTTAGTCCATGAACTTTGATTTGTAACGATTTAGTCCCCATACTTTCAATTTTGTAACAATTTAGTCCCTAAACTTAAGTAACAATTTAGTCTCCATACTTTCAGATTTGTAACAATTTAATCCTTGTTGCAAAATTTTTTATCAAAATTAAATGTTGATTTTTATTGTTTAATGATTAGCTTTGTAGCTTACAGACATATTTGGTTCCAAATTATTTTATTAATCTATCTAGGTAAGAAATTTCATTAAGTCTTAACAGTAATTTTTTATAGGGACTAAATCGTTACAAATGTTAAAGTACATGGACTAAATTGTTACAAATGAAAGTTCACGGACTAAATTGTCACAAAATTGAAAGTATAAGGATTAAATTGTTACAAATCAAAATTTTGGCACTAAATTGTTACTTTCACGAAAGTTCAGCTACCAAAATGATTTTTAAACTATATATTTTTAGTCTTTTACTTTTGAAATTTGTGCAAATAATTCATTTATTTACTCTATCTTATTTCAGCTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGTTTGTTTTCCATCTCCTGGTCAACCATCTCTCTGGATATTTATTACATGGAATCTTTCTCGTGTGTCTGCATGTTTTGTTTCTATATTTTTACCCTTCTGTCTGGTTCTTCAATTGTTGTTTATCTTACTGCTTCTGTTCAATCATGTTTTATTTTGGAGTCTAGCCTTTCACGTCTGCCTTTATTAATGAAATCAAATAATATTGCTCAGTATCTCGTTCAAGTGCCAGAAATCATGACTTCATGTCTTTAACTATCGTGATAAGCTTGAGTTTGGTTGCAGCTTTACTTCTATTTCAATCACTCTTTCATTATTTTGTTTCAATAAATTGGGCCATGTGCATTCTTCTTGTGCCATAAGAAAGGGTTTCTGGGGCTGATGTCACAACACTCTGTGCTCAACTGCTCATATGTTTGTGTAACCCTGAGTTTTCTAGGCTAGGCTAGGTGCGCCTTGGAGTGGACTATTCTTTTTGGGAAGACTAGGTTGACAAACAATTGTCTATCACGAGCACCATCACTCAAATGGCTGCCTCATATTTTTGTTTTCTTTGACCACTTCTTATTGCCTTTTACATTTTTTCTTTGACCACCTCTTATTACCTTTTATAGCCTTTTGCGCCTTACTGAAGGAATGCAATCTTCTGAAATACTTTAATATTTCGGACTAAAAACCTTCTTTTTGATTCATTATGTCTTGAAGATACAATTGCCTGTCAAAACAATTTTATTGAACACAAATTTATTTATGCCCGATTATATTTGTGTTTATCATGCATTCCTATTTTCTATCTACTATATAATATGTAACTAGAAAACTCTTGCCCCCAGGTAAGCAAAAGTTTGTGGCCATAGAGTGAGAATTGAAAATATTGGTACAAGTCTCGCTAATGAATATTAGGAAGCAAAATACTCCAAGGCTGAAGTACAGCTGTAGCAAGATGATAATATTGGCACTTATTCCATTCTAGTAGTGCTAATTCTGAGTTAGCGTTCCATTCTATTTTTTTAGGAAAGCCCTACTAAATGCCCTCATCCCATTATTGTGTTGCTAATGTTGATTGTATCTTTTTGTGTCGTGACAAGCTCGACTCTGGTTGCAACCTTGCTTCTATTGCAATTGGTCTTTTGTTACTTTTCTCATTGAAATGGGTAGTTATGATCACTGTTCTGATACATATTTACGCAAATTGGTATAAGAACTCTTTAATGATACTTGAACACATAACTTGCCTGGCAATTTCAGAGGTTTTACTTTCCTACTCTTTCTCTAGAACTGTCCAGCCTTCTCCTTTAATTTCTCTACTCTATCGAATAACTTTGTAAGAAGCCAGGTGCCTACCTCAAAAGTAGTTTATTAGTTTTTTTTCCCTTTCTTTTTTGAAATTGGATACCTAGTAATTTATTAATTGTTCATAAAATGAAACTGCAATTGATAACAGTAACACATTGATAGACCCCCAGTGAAGTATGTGTATAGCAGGAGATGAAAGAAGAATAGGGAAGGGACTGTTATGAGTTAGTTGAGGTTGTTAGAGTTGGTTATGTGGGTCTGTTATGTATAGCCTATATAGATGGTAGTCTGGAGAGGGATAGTTACCTTTTGGAGTCTTGAATAGAGGAGTGACTAAGGTGGAGAGGTTAGGGAAGCTCTCGAATTCTTCCCAGGTCTGTAACTAGTTCTTGTGCATAAATAATATACTCTGTTCCTATCACACGTTGAAAAATACATAGAACATATTAACACCAGAAATTAAATAGTTTTGTAAAGGATACCCTGTAACTATGAAACTTAGATATAAATCAAAGTTTTAACTTTTGAGGAGCAACCAATACCAGAACTAGTAGAATTTATGTGAAAAAGTTGGGACTGAGTATCGCATAATTTTATTGGTAGATTTGCCTCTCTTGATTTGAGCTGATGTTTGCATTTTAGGATATAGCAACAGCTAACAGCGATCCAAAGACGTGAATTGTGACATAATTCTAATACATTATACTTAGCAGTTAACTCTAGACAGACATTGAAAGAGGTAGGGAATGAGAGAAGAAAAGTACTCTGAAATGGTGTGTAGTAAAAGGTGGAAGAGTCTTTCATTTGGCTTCAAGAAAGGAAAGATTATTAATTATAAAGTAAGTTGGAGTTTAAAAAAAAATTGAAATCAAAAGTTAATTTTGATAATATATATATATATATATATATATATATATATTGGATAAATAACTGAACTTTCATTGAGAAAAAATGAAAGAATACAAGGGCATCTAAAAAAACCAAGCCCAAGGAAAATGAACCCAACTACAGAAAGAGTTTACAATCAATCAAAATAAGACCTAATGGGTAATTACAAAAAGTCTTAGAGATTAAGACCCATAGAGAAACGGAAAATCTAGTATTAGCCCAAACCTCACAAGGAAGTCTCTTGGCCCCTCTAAAAATTCTATTATTCCTCTCCCCCATAAACCCCAAAGAATACTACAAACACTAGTATGCCTCAAAAACCTTCCCTTCTCCTGATACGGTGGATGGAGGAGGAACTCCTCGATCATCTCCTTGCAATGATGTTGGTCAAAAATTTGAAACCCCAAAAACCTCAAAGAAGAGGCTCCAAACTGAGCGAACAAATCACAACCCCACAACAAATAATCAAGATCATCCTCTGCCCTTCCTTATCTAAAAAAAGATTGCCTTCCACAGAGAATGCAACAAAAAGGGCCAACCACAGGGAGCATCACTCTCGATAGCTTTTCAAAAGTGTTAACATGACCTAGGATGACCTGCCAAACGAAGAACAAAACTTTTTGGAACTTTAACCTTACACAAACACGAAAAAACAAACTCTCTAATCGGGGAGAGATTTACCTAAAATTGAAAGAACGAGCTGCAAGAAAAGCCCCCAGAGGGGTTGGAACTCCAAAAGTGAACATCCCTCCTATTTGTCTAAGATTAACCCCCTCTAACAAAGATAGGAGGGCCAGGATGTCCGTGGTTTCTCTATCAGATAACAGATGATGAAGTTAGTTTTGATAATATTAATTAATTCTGGAATTATTGTCTATAAGTGGAGGGACCAAAACTCAATTCCAACATTTCATATTACCTTCTATGAACTCCATGGGCGTGTGTAGTTTCTCATTCATTCATCCTAATTTTCCAGCACTTGTAACTGACTCTTTTTCATCTTACTGTGTGTGTTCTCTTTCCACCAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTAACCTATATCAAACAATCTTATTTTCTTTCTTCAGACATTTTCCTTTACTCATATCCATTGGGCACTTTAATTAAATGGTTGGGGGGAAGCGTGACATTATAACCTGTCCTGTTTTGGGTTAAACCTATTCTAAGGTGGGTTAGTTAACCTCAATCAAATTCCACCCCGTTCCCATCAAAACACTGGTTTGGTTCTGCTGCAGTTTCTTCAACGAGCTTTGGCCCTTGATAAGCTTGTTTAGGAATTAGGAATTGAATTTTGCATTTTGGAGATTATACAAGTTAGAAAAAATTAGATAGTTTAACTGTTAAGTTGAGCGTATAAACTATCATATGTCTGATTGTTCTTACAACTGTATGATGTAAATTAACATGTAAATAGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTGTTTGACCCCTTGAACCTGTCCAAGGATACTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCAAGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAATAACATTCTTTCCCTGCTCAACTCTTCAAAGTAG

mRNA sequence

ATGCAAGCAGATGTCTGGTGTTCAAATCCTGTTCGGCAAGACGCTAAACTTGGGGCACAACACAATACACCCAAAAACACCTCATGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCAATTCCATATGATTATCCAAAATATCTGTCAGGTGAACTGCCGGGTGATTATGGATTCGATATTGCTGGTCTGAGCAAGGATCCCGTGGCTTTCCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTGTTTGACCCCTTGAACCTGTCCAAGGATACTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCAAGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAATAACATTCTTTCCCTGCTCAACTCTTCAAAGTAG

Coding sequence (CDS)

ATGCAAGCAGATGTCTGGTGTTCAAATCCTGTTCGGCAAGACGCTAAACTTGGGGCACAACACAATACACCCAAAAACACCTCATGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCAATTCCATATGATTATCCAAAATATCTGTCAGGTGAACTGCCGGGTGATTATGGATTCGATATTGCTGGTCTGAGCAAGGATCCCGTGGCTTTCCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTGTTTGACCCCTTGAACCTGTCCAAGGATACTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCAAGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAATAACATTCTTTCCCTGCTCAACTCTTCAAAGTAG

Protein sequence

MQADVWCSNPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSSK

Homology

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BLAST of Lag0036658 vs. NCBI nr
Match: XP_008453032.2 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo])

HSP 1 Score: 468.4 bits (1204), Expect = 3.9e-128
Identity = 218/227 (96.04%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 25  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 84
           K++SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQKYFNFEILHARW
Sbjct: 145 KDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARW 204

Query: 85  AMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 144
           AMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA
Sbjct: 205 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 264

Query: 145 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEI 204
           ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEI
Sbjct: 265 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEI 324

Query: 205 KNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSS 252
           KNGRLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFHNN LSLLNSS
Sbjct: 325 KNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS 371

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BLAST of Lag0036658 vs. NCBI nr
Match: XP_038898449.1 (chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 467.6 bits (1202), Expect = 6.7e-128
Identity = 217/227 (95.59%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 25  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 84
           K++SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQKYFNFEILHARW
Sbjct: 121 KDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARW 180

Query: 85  AMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 144
           AMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGV+VIA
Sbjct: 181 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVVVIA 240

Query: 145 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEI 204
           ICQAILMVGPEYARYCGIEALEPLGI+LPGDINYPGGVLFDPLNLSKD AAFEELKVKEI
Sbjct: 241 ICQAILMVGPEYARYCGIEALEPLGIFLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEI 300

Query: 205 KNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSS 252
           KNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN LSLLNSS
Sbjct: 301 KNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNFLSLLNSS 347

[Close]

BLAST of Lag0036658 vs. NCBI nr
Match: XP_004145567.1 (chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 2.5e-127
Identity = 216/227 (95.15%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 25  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 84
           K++SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQK+FNFEILHARW
Sbjct: 109 KDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARW 168

Query: 85  AMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 144
           AMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA
Sbjct: 169 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 228

Query: 145 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEI 204
           ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEI
Sbjct: 229 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEI 288

Query: 205 KNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSS 252
           KNGRLAMVAWLGFYSQAALTGKGPVQNLL+HI+DPFHNN LSLLNSS
Sbjct: 289 KNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSS 335

[Close]

BLAST of Lag0036658 vs. NCBI nr
Match: TYK19913.1 (chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 465.3 bits (1196), Expect = 3.3e-127
Identity = 217/224 (96.88%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 28  SWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAML 87
           SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAML
Sbjct: 47  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAML 106

Query: 88  ASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ 147
           ASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ
Sbjct: 107 ASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ 166

Query: 148 AILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNG 207
           AILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNG
Sbjct: 167 AILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNG 226

Query: 208 RLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSS 252
           RLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFHNN LSLLNSS
Sbjct: 227 RLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS 270

[Close]

BLAST of Lag0036658 vs. NCBI nr
Match: XP_022936160.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata])

HSP 1 Score: 463.8 bits (1192), Expect = 9.7e-127
Identity = 214/227 (94.27%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 25  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 84
           K++SWYGE+RPRWLGP+PY+YPKYL+GELPGDYGFDIAGLS+DPVAF+KYFNFEILHARW
Sbjct: 111 KDSSWYGEKRPRWLGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARW 170

Query: 85  AMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 144
           AMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA
Sbjct: 171 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 230

Query: 145 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEI 204
           ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEI
Sbjct: 231 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEI 290

Query: 205 KNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSS 252
           KNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFHNN LSLLNSS
Sbjct: 291 KNGRLAMVAWLGFYSQAALTGKGPIQNLLEHVSDPFHNNFLSLLNSS 337

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BLAST of Lag0036658 vs. ExPASy Swiss-Prot
Match: Q9C9K1 (Chlorophyll a-b binding protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB7 PE=2 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.2e-114
Identity = 182/225 (80.89%), Postives = 207/225 (92.00%), Query Frame = 0


Query: 26  NTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWA 85
           ++ WYG+ERPRW GPIPYDYP YL+GELPGDYGFDIAGL KD + F KYFNFEILHARWA
Sbjct: 103 DSKWYGKERPRWFGPIPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWA 162

Query: 86  MLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAI 145
           MLA+LGALIPE+ D+ G FHF EP+WWRVGYSKL+G+TL+YLGIPGLH+AGSQGVIVIAI
Sbjct: 163 MLAALGALIPEVFDLTGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAI 222

Query: 146 CQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIK 205
           CQ +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIK
Sbjct: 223 CQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIK 282

Query: 206 NGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNS 251
           NGRLAMVAWLGFY+QAA TGKGPVQNL++H+SDP HNN++++L +
Sbjct: 283 NGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLIAMLQT 327

[Close]

BLAST of Lag0036658 vs. ExPASy Swiss-Prot
Match: P27489 (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB13 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.8e-54
Identity = 106/236 (44.92%), Postives = 143/236 (60.59%), Query Frame = 0


Query: 8   SNPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKD 67
           +NP+R    +G+   T  N  WYG +R ++LGP     P YL+GE PGDYG+D AGLS D
Sbjct: 26  ANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSAD 85

Query: 68  PVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL 127
           P AF K    E++H RWAML +LG + PE+L+ +    F EP+W++ G        LDYL
Sbjct: 86  PEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYL 145

Query: 128 GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPL 187
           G P  +L  +Q ++ +   Q +LM   E  R  G+  +        G+  YPGG  FDPL
Sbjct: 146 GNP--NLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVG------EGNDLYPGGQYFDPL 205

Query: 188 NLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN 244
            L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NLL+H+ +P  NN
Sbjct: 206 GLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253

[Close]

BLAST of Lag0036658 vs. ExPASy Swiss-Prot
Match: Q9S7M0 (Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB3 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.9e-54
Identity = 107/235 (45.53%), Postives = 141/235 (60.00%), Query Frame = 0


Query: 9   NPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDP 68
           NP+R    LG+   T  N  WYG +R ++LGP     P YL+GE PGDYG+D AGLS DP
Sbjct: 27  NPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADP 86

Query: 69  VAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG 128
            AF K    E++H RWAML + G + PE+L  +    F EP+W++ G        LDYLG
Sbjct: 87  EAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 146

Query: 129 IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLN 188
            P  +L  +Q ++ +   Q ILM   E  R  G++ +        G+  YPGG  FDPL 
Sbjct: 147 NP--NLVHAQSILAVLGFQVILMGLVEGFRINGLDGVG------EGNDLYPGGQYFDPLG 206

Query: 189 LSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN 244
           L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NLL+H+ +P  NN
Sbjct: 207 LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253

[Close]

BLAST of Lag0036658 vs. ExPASy Swiss-Prot
Match: Q9XF87 (Chlorophyll a-b binding protein 2.4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.4 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-52
Identity = 111/222 (50.00%), Postives = 142/222 (63.96%), Query Frame = 0


Query: 22  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILH 81
           +TP++  WYG +RP++LGP   + P YL+GE PGDYG+D AGLS DP  F K    E++H
Sbjct: 44  STPQSI-WYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIH 103

Query: 82  ARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVI 141
           +RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++
Sbjct: 104 SRWAMLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSIL 163

Query: 142 VIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKV 201
            I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKV
Sbjct: 164 AIWACQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFSELKV 223

Query: 202 KEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN 244
           KE+KNGRLAM +  GF+ QA +TGKGP++NL +HI+DP  NN
Sbjct: 224 KELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVANN 254

[Close]

BLAST of Lag0036658 vs. ExPASy Swiss-Prot
Match: P27523 (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare OX=4513 GN=LHBC PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.6e-52
Identity = 104/236 (44.07%), Postives = 140/236 (59.32%), Query Frame = 0


Query: 8   SNPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKD 67
           ++P+R  A       T  N  WYG +R ++LGP     P YL+GE PGDYG+D AGLS D
Sbjct: 29  ASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSAD 88

Query: 68  PVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL 127
           P AF +    E++H RWAML +LG + PE+L  +    F EP+W++ G        LDYL
Sbjct: 89  PEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYL 148

Query: 128 GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPL 187
           G P  +L  +Q ++ +   Q +LM   E  R  G++ +        G+  YPGG  FDPL
Sbjct: 149 GNP--NLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVG------EGNDLYPGGQYFDPL 208

Query: 188 NLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN 244
            L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NL +H+ DP  NN
Sbjct: 209 GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256

[Close]

BLAST of Lag0036658 vs. ExPASy TrEMBL
Match: A0A1S3BWE1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493859 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.9e-128
Identity = 218/227 (96.04%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 25  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 84
           K++SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQKYFNFEILHARW
Sbjct: 145 KDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARW 204

Query: 85  AMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 144
           AMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA
Sbjct: 205 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 264

Query: 145 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEI 204
           ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEI
Sbjct: 265 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEI 324

Query: 205 KNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSS 252
           KNGRLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFHNN LSLLNSS
Sbjct: 325 KNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS 371

[Close]

BLAST of Lag0036658 vs. ExPASy TrEMBL
Match: A0A5D3D8P8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00250 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.6e-127
Identity = 217/224 (96.88%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 28  SWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAML 87
           SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAML
Sbjct: 47  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAML 106

Query: 88  ASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ 147
           ASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ
Sbjct: 107 ASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ 166

Query: 148 AILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNG 207
           AILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNG
Sbjct: 167 AILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNG 226

Query: 208 RLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSS 252
           RLAMVAWLGFYSQAALTGKGPVQNLL+HISDPFHNN LSLLNSS
Sbjct: 227 RLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS 270

[Close]

BLAST of Lag0036658 vs. ExPASy TrEMBL
Match: A0A6J1FCV0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442842 PE=3 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 4.7e-127
Identity = 214/227 (94.27%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 25  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 84
           K++SWYGE+RPRWLGP+PY+YPKYL+GELPGDYGFDIAGLS+DPVAF+KYFNFEILHARW
Sbjct: 111 KDSSWYGEKRPRWLGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARW 170

Query: 85  AMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 144
           AMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA
Sbjct: 171 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 230

Query: 145 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEI 204
           ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEI
Sbjct: 231 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEI 290

Query: 205 KNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSS 252
           KNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFHNN LSLLNSS
Sbjct: 291 KNGRLAMVAWLGFYSQAALTGKGPIQNLLEHVSDPFHNNFLSLLNSS 337

[Close]

BLAST of Lag0036658 vs. ExPASy TrEMBL
Match: A0A0A0L0U5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_4G664570 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 6.1e-127
Identity = 215/225 (95.56%), Postives = 223/225 (99.11%), Query Frame = 0


Query: 27  TSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAM 86
           +SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQK+FNFEILHARWAM
Sbjct: 47  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAM 106

Query: 87  LASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAIC 146
           LASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAIC
Sbjct: 107 LASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAIC 166

Query: 147 QAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKN 206
           QAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKN
Sbjct: 167 QAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKN 226

Query: 207 GRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSS 252
           GRLAMVAWLGFYSQAALTGKGPVQNLL+HI+DPFHNN LSLLNSS
Sbjct: 227 GRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSS 271

[Close]

BLAST of Lag0036658 vs. ExPASy TrEMBL
Match: A0A6J1IGJ6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111474607 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.4e-126
Identity = 213/227 (93.83%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 25  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 84
           K++SWYGE+RPRWLGP+PY+YPKYL+GELPGDYGFDIAGLS+DPVAF+KYFNFEILHARW
Sbjct: 111 KDSSWYGEKRPRWLGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARW 170

Query: 85  AMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 144
           AMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA
Sbjct: 171 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 230

Query: 145 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEI 204
           ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLS+D AAFEELKVKEI
Sbjct: 231 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSEDAAAFEELKVKEI 290

Query: 205 KNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNSS 252
           KNGRLAMVAWLGFYSQAALTGKGP+QNLLEH+SDPFHNN LSLLNSS
Sbjct: 291 KNGRLAMVAWLGFYSQAALTGKGPIQNLLEHVSDPFHNNFLSLLNSS 337

[Close]

BLAST of Lag0036658 vs. TAIR 10
Match: AT1G76570.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 414.1 bits (1063), Expect = 8.2e-116
Identity = 182/225 (80.89%), Postives = 207/225 (92.00%), Query Frame = 0


Query: 26  NTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWA 85
           ++ WYG+ERPRW GPIPYDYP YL+GELPGDYGFDIAGL KD + F KYFNFEILHARWA
Sbjct: 103 DSKWYGKERPRWFGPIPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWA 162

Query: 86  MLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAI 145
           MLA+LGALIPE+ D+ G FHF EP+WWRVGYSKL+G+TL+YLGIPGLH+AGSQGVIVIAI
Sbjct: 163 MLAALGALIPEVFDLTGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAI 222

Query: 146 CQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIK 205
           CQ +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIK
Sbjct: 223 CQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIK 282

Query: 206 NGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILSLLNS 251
           NGRLAMVAWLGFY+QAA TGKGPVQNL++H+SDP HNN++++L +
Sbjct: 283 NGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLIAMLQT 327

[Close]

BLAST of Lag0036658 vs. TAIR 10
Match: AT5G54270.1 (light-harvesting chlorophyll B-binding protein 3 )

HSP 1 Score: 213.0 bits (541), Expect = 2.8e-55
Identity = 107/235 (45.53%), Postives = 141/235 (60.00%), Query Frame = 0


Query: 9   NPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDP 68
           NP+R    LG+   T  N  WYG +R ++LGP     P YL+GE PGDYG+D AGLS DP
Sbjct: 27  NPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADP 86

Query: 69  VAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG 128
            AF K    E++H RWAML + G + PE+L  +    F EP+W++ G        LDYLG
Sbjct: 87  EAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 146

Query: 129 IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLN 188
            P  +L  +Q ++ +   Q ILM   E  R  G++ +        G+  YPGG  FDPL 
Sbjct: 147 NP--NLVHAQSILAVLGFQVILMGLVEGFRINGLDGVG------EGNDLYPGGQYFDPLG 206

Query: 189 LSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN 244
           L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NLL+H+ +P  NN
Sbjct: 207 LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253

[Close]

BLAST of Lag0036658 vs. TAIR 10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3 )

HSP 1 Score: 208.0 bits (528), Expect = 8.9e-54
Identity = 111/222 (50.00%), Postives = 142/222 (63.96%), Query Frame = 0


Query: 22  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILH 81
           +TP++  WYG +RP++LGP   + P YL+GE PGDYG+D AGLS DP  F K    E++H
Sbjct: 44  STPQSI-WYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIH 103

Query: 82  ARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVI 141
           +RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++
Sbjct: 104 SRWAMLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSIL 163

Query: 142 VIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKV 201
            I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKV
Sbjct: 164 AIWACQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFSELKV 223

Query: 202 KEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN 244
           KE+KNGRLAM +  GF+ QA +TGKGP++NL +HI+DP  NN
Sbjct: 224 KELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVANN 254

[Close]

BLAST of Lag0036658 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-52
Identity = 110/225 (48.89%), Postives = 142/225 (63.11%), Query Frame = 0


Query: 22  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILH 81
           +TP++  WYG +RP++LGP   + P YL+GE PGDYG+D AGLS DP  F K    E++H
Sbjct: 43  STPQSI-WYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIH 102

Query: 82  ARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVI 141
           +RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++
Sbjct: 103 SRWAMLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSIL 162

Query: 142 VIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKV 201
            I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKV
Sbjct: 163 AIWAVQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFSELKV 222

Query: 202 KEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILS 247
           KE+KNGRLAM +  GF+ QA +TGKGP++NL +H++DP  NN  S
Sbjct: 223 KELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWS 256

[Close]

BLAST of Lag0036658 vs. TAIR 10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2 )

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-52
Identity = 110/225 (48.89%), Postives = 142/225 (63.11%), Query Frame = 0


Query: 22  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILH 81
           +TP++  WYG +RP++LGP   + P YL+GE PGDYG+D AGLS DP  F K    E++H
Sbjct: 43  STPQSI-WYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIH 102

Query: 82  ARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVI 141
           +RWAML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++
Sbjct: 103 SRWAMLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSIL 162

Query: 142 VIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKV 201
            I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKV
Sbjct: 163 AIWAVQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFSELKV 222

Query: 202 KEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNILS 247
           KE+KNGRLAM +  GF+ QA +TGKGP++NL +H++DP  NN  S
Sbjct: 223 KELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWS 256

The following BLAST results are available for this feature:

BLAST of Lag0036658 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453032.2	3.9e-128	96.04	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis m...	[more]
XP_038898449.1	6.7e-128	95.59	chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_004145567.1	2.5e-127	95.15	chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus]	[more]
TYK19913.1	3.3e-127	96.88	chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo var. ma...	[more]
XP_022936160.1	9.7e-127	94.27	chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]	[more]

BLAST of Lag0036658 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9K1	1.2e-114	80.89	Chlorophyll a-b binding protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P27489	1.8e-54	44.92	Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
Q9S7M0	3.9e-54	45.53	Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9XF87	1.3e-52	50.00	Chlorophyll a-b binding protein 2.4, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
P27523	3.6e-52	44.07	Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulg...	[more]

BLAST of Lag0036658 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BWE1	1.9e-128	96.04	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3D8P8	1.6e-127	96.88	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1FCV0	4.7e-127	94.27	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0A0L0U5	6.1e-127	95.56	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1IGJ6	1.4e-126	93.83	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Lag0036658 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76570.1	8.2e-116	80.89	Chlorophyll A-B binding family protein	[more]
AT5G54270.1	2.8e-55	45.53	light-harvesting chlorophyll B-binding protein 3	[more]
AT3G27690.1	8.9e-54	50.00	photosystem II light harvesting complex gene 2.3	[more]
AT2G05100.1	1.7e-52	48.89	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	1.7e-52	48.89	photosystem II light harvesting complex gene 2.2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 46..221 e-value: 9.0E-42 score: 143.3
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 36..248 e-value: 4.7E-71 score: 240.8
None	No IPR available	PANTHER	PTHR21649:SF74	CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC	coord: 19..244
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 28..249
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 19..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0036658.1	Lag0036658.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding