Lag0036648 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0036648
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	UPF0047 protein like
Location	chr2: 143671 .. 147352 (-)
RNA-Seq Expression	Lag0036648
Synteny	Lag0036648

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGCGCTGTTCTCTTGACTGCACAACCACTCCGCGTAAAGTTGTTGTGGAGCAGCGATACCAGTAGAGGTAATCAGTCCGCCACCGCAGGCACAGGCAATTCAAGCTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTATGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACACCGAAGGTGATTAATTGGTTTTCTTCTCCCACCTAGTCTAGAATCTCGTATTGATCTCCTGGGTGTTCATAACTTTCTGTTGCTTCTTAGTCTTGTATAACCTGTCATCTACATATCTCAGTTTCACTTCTTGAATTTAAACTTCCCCATTTTCCTGAATGATGGACGACAATGTAATGTTTTCTAAATACATAAAAAAATATATCCTTTTTGTTGCCTTGCTAAAATTATTCCTTTCAACTTTAATCGTGCAATTTGTTTTCTCATATTGCTGCTACTGAGTTTGATTTCCATATCAGATAATGAAGGAAATTGGGCAGGACTTGTCAGAATTCAAATGTGGCATTGCTCATATCTTCTGTAGATCTTCTAATCCCGTTTTTCTATTTCGGAGATTCATGTGTAGTTGGATTTCTTTTTCGAATCGTTTGATGTTTTTGCAGTGCAGCATACGAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCGGAGTGATACTGAAACCTTCCTCAACAAGATAGTGCCTGAAGTTAGTTTGCTATCCGCACTTATCATTTGCAACTCTCATTTATTGAAAGCTAATCCTATTTGACCCTTTGTTTCTGTCCCCCACTCTCTCATTTGGGGGGTTGCTTGCAGGGGACATCTGCTCCTTGGAAGCATACACTTGAAGGTTATCAGGAATAATTTCCTTCTAGTTTATTCTACTAAGAACTTTCCCCGTTTTTAGTTTTCTGATTTCATATACTGAAAAATAAACCGTACTGCTATAAGGGCCCGTGATTGTTTCCATCATAATATTGCAAGACAACGTGAACTCTTGTGATGTATAGGATGCTAAGGAAGGTGCCACCTGTCTATGAGGGGGAGGGATTATGATAGATGTGCGGTAGTTTATGAAAAAGGGCAGAAAAATGTAAAATCAACCAACCAAGGCAAATATATAAAGAGGAAGTAAGCTGAAACAAAATTTATCCGAAGTAAAATAATTTTAATTCGACAGGTTATTTTTGTAAAAACCAAACTCACTTCTAATCCTTCAAAGTTCTATACTAATATCCCTTCTAAAAAATGATTGAAGGAGTAAATAACGATCTGTATAAGAATTGGAAGCATATGATTTTTCCAACGAAAAAGGATTCTCTGGCCCAAATTAACGAATTTAAATAAACTAAAACTAGGGTAAAACTAATTCAACAAATTTGCTACTAAATAACCTAATCGCTGGAAATTATTAAATGGAGCTTAGACAAATAAAATATCTATCAAAACATATTCTATATCACAAAAACTCTTTTGTTGCAAGCTTTTAGATTTAAATTTTCGAATAGAATGCAAGTGCTTCGGCATCGCCGAGCAAATTAACAAGAAATAGGATTGGAGGTTGGAAGACCTTTCTTTTTTCTAAAAAAATTTGCTCTCTGGTTTTCTACTCAACTAAGCTGTTGAAAGGATCTGGAAAATATTGACAAAATTTTCTTGTTCATCCTACTCTAGGGTTGTTTCAACCATTCCAGTATATTTTCTTTTTATTTTTTATTATATATATATATTTTTTGACAATGCATGTGCTCATTTTGCAGGCCCGGATGACATGCCAGCACACATTAAATCATCAATGTTTGGCTGTGATCTCACGTGGGTTATTCTACATATTTCTGGATTAAAGCCTAATTGACCTGCTGTTCTCATTTGTGGTTATTCTTTTGTAGGATTCCAATTACAAATGGAAAGTTTAATATGGGTACTTGGCAGGTACAGTTTAGTATGTCCTTTTATTTATTTTATAGTTTTTCCGTTAAATCGAAAACTAACAATTCTTGTTGATTGTGAGAATGATTAATTGGAGAGTGAAACGTTTGAAATTTCAATATTGATTCTTTATTCATTTAGTTGAGTAATTGGCATTTAGGTGTTTTTGGTATACGAGAATGAAGGGGTGAGAATGAAAAGGAGTTTGTTATTCCATTGATTGGAACACGATTTGTAATTTAGGTATGAGAATATATCATTCCTTAGCATCTTCATGAACAAGGGTAATCCATAGCCTTCCAAACTTACGGGTTTTCAACTTTTCTCCCTGCCTAGGATTAAACTTCTCTTCGCACTTAAGTTTTTCTTCTTCTTTTACATAGTTTCATTTTGTTAGGGTATATTTGTTTATTTTATTTAGTTAGAACTAATCAATATGTTTAAATTAATTTTATAATTGATAAGACTACATGTGTTTGTTAGGTTGTTTTGTTTTGTTTTGATAAAAGGCCGAGTTTTCATTGAGAAAAAAAGAAAGAACCCAAGGGCATACAAAAAAGGAGTCCACAAAAGGTGGAGGTCAACTAAAGGAAGGGCCCCTAGTCCAACAAAATAAGACCTAACAAATAATTACAAAACAGTTTAACCACCAAAGTCCACAAGGACACATTTAATCTAGCAAGAAACCACACATTCCTCATAGATCACTCAAAACCTCTAAAAACCCTGTTATTCCTCCCCTCCAAAAGAACCCACAAAACAGGGCATGCCTCCATTGTCACAGGAACCTTCCTTTCTTGCGAAAAGGAGGGTGAAGAAGGAACTCCTCGATAATTTCCTTGTAGTTCCTATATCTAGCAAGGTTGAAACCAAAACTCCTCGAAAAAATAATTCCAAACAGTTTGGGCTAAACCACAACTCCAAAAGATATGATCAACAAGGCAGACCAATCAACATATCCGTTAACTCGGAGGGAGCGTCGGGCGGCATTTTAGTGCTGTGGAAAGAGAAGGAAGTCAAAGCCTTGGAGGTGGTATTGGGTATTTACTCGCTGTCCGTTTTGTTTGAATGTGGGAATCAAAATCAGTTTTTGGTGACTGGAGTTTATGGGCCTAGCCGTCCTAAGGGTAGAAATTTTTTTTGGAGGGAGCTTTATGACCTCTGTGGTTTGTGCAGTGGAGTTTGGTGCATTGGAGGGGACTTCAATGTGGTGAGAAGTATTGAAGAAAAATCTTCCAGAGGTAGAGTTACTAAAAGTATGCGTGCTTTTAACTGTTGGGTGGAAAATTGTAGTCTTTCGGAGGTCGTTTTGGTTAATGCTAGATACACGTGGTATGAAAAAAGAGAGTCCCCAGTGTTTACTAAAATTGACAGATTCTTTGTGACCAAAGAATGGTTGGACCTCTTCTCCAACGTGAATTCCAATCGGTTACAACGTATTACATCGAATCACTTCCCAATTTTACTTCAAGCTGGGAATTTCTCTTGGGGACTGATGCCTTTTAGATTTGAAAATGCTTGGCTATCCCATCTGAATTTCAGGAACTTGATAGATGGTTGGTGGAAGGAGCAAAATGTGGAAGGGTGGGCAGGGTATCAATTTATGGCCAAACTGAAAGACATTAAAGAAAACTTAAAAGGGTGGAACAAGGAAACCTTTGGTGCTATAAGAGATGAAAAAATCAAAGAGATGAAAAAACCAGAATTTGCCAGAGAATTGAGCAGCTAG

mRNA sequence

ATGCAAGGCGCTGTTCTCTTGACTGCACAACCACTCCGCGTAAAGTTGTTGTGGAGCAGCGATACCAGTAGAGGTAATCAGTCCGCCACCGCAGGCACAGGCAATTCAAGCTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTATGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACACCGAAGATAATGAAGGAAATTGGGCAGGACTTGTCAGAATTCAAATGTGGCATTGCTCATATCTTCTTGCAGCATACGAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCGGAGTGATACTGAAACCTTCCTCAACAAGATAGTGCCTGAAGGGACATCTGCTCCTTGGAAGCATACACTTGAAGGCCCGGATGACATGCCAGCACACATTAAATCATCAATGTTTGGCTGTGATCTCACGATTCCAATTACAAATGGAAAGTTTAATATGGGTACTTGGCAGGAACCTTCCTTTCTTGCGAAAAGGAGGGTGAAGAAGGAACTCCTCGATAATTTCCTTGTAGTTCCTATATCTAGCAAGGTTGAAACCAAAACTCCTCGAAAAAATAATTCCAAACAGTTTGGGCTAAACCACAACTCCAAAAGATATGATCAACAAGGCAGACCAATCAACATATCCGTTAACTCGGAGGGAGCGTCGGGCGGCATTTTAGTGCTGTGGAAAGAGAAGGAAGTCAAAGCCTTGGAGGTGGTATTGGGTATTTACTCGCTGTCCGTTTTGTTTGAATGTGGGAATCAAAATCAGTTTTTGGTGACTGGAGTTTATGGGCCTAGCCGTCCTAAGGGTAGAAATTTTTTTTGGAGGGAGCTTTATGACCTCTGTGGTTTGTGCAGTGGAGTTTGGTGCATTGGAGGGGACTTCAATGTGGTGAGAAGTATTGAAGAAAAATCTTCCAGAGGTAGAGTTACTAAAAGTATGCGTGCTTTTAACTGTTGGGTGGAAAATTGTAGTCTTTCGGAGGTCGTTTTGGTTAATGCTAGATACACGTGGTATGAAAAAAGAGAGTCCCCAGTGTTTACTAAAATTGACAGATTCTTTGTGACCAAAGAATGGTTGGACCTCTTCTCCAACGTGAATTCCAATCGGTTACAACGTATTACATCGAATCACTTCCCAATTTTACTTCAAGCTGGGAATTTCTCTTGGGGACTGATGCCTTTTAGATTTGAAAATGCTTGGCTATCCCATCTGAATTTCAGGAACTTGATAGATGGTTGGTGGAAGGAGCAAAATGTGGAAGGGTGGGCAGGGTATCAATTTATGGCCAAACTGAAAGACATTAAAGAAAACTTAAAAGGGTGGAACAAGGAAACCTTTGGTGCTATAAGAGATGAAAAAATCAAAGAGATGAAAAAACCAGAATTTGCCAGAGAATTGAGCAGCTAG

Coding sequence (CDS)

ATGCAAGGCGCTGTTCTCTTGACTGCACAACCACTCCGCGTAAAGTTGTTGTGGAGCAGCGATACCAGTAGAGGTAATCAGTCCGCCACCGCAGGCACAGGCAATTCAAGCTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTATGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACACCGAAGATAATGAAGGAAATTGGGCAGGACTTGTCAGAATTCAAATGTGGCATTGCTCATATCTTCTTGCAGCATACGAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCGGAGTGATACTGAAACCTTCCTCAACAAGATAGTGCCTGAAGGGACATCTGCTCCTTGGAAGCATACACTTGAAGGCCCGGATGACATGCCAGCACACATTAAATCATCAATGTTTGGCTGTGATCTCACGATTCCAATTACAAATGGAAAGTTTAATATGGGTACTTGGCAGGAACCTTCCTTTCTTGCGAAAAGGAGGGTGAAGAAGGAACTCCTCGATAATTTCCTTGTAGTTCCTATATCTAGCAAGGTTGAAACCAAAACTCCTCGAAAAAATAATTCCAAACAGTTTGGGCTAAACCACAACTCCAAAAGATATGATCAACAAGGCAGACCAATCAACATATCCGTTAACTCGGAGGGAGCGTCGGGCGGCATTTTAGTGCTGTGGAAAGAGAAGGAAGTCAAAGCCTTGGAGGTGGTATTGGGTATTTACTCGCTGTCCGTTTTGTTTGAATGTGGGAATCAAAATCAGTTTTTGGTGACTGGAGTTTATGGGCCTAGCCGTCCTAAGGGTAGAAATTTTTTTTGGAGGGAGCTTTATGACCTCTGTGGTTTGTGCAGTGGAGTTTGGTGCATTGGAGGGGACTTCAATGTGGTGAGAAGTATTGAAGAAAAATCTTCCAGAGGTAGAGTTACTAAAAGTATGCGTGCTTTTAACTGTTGGGTGGAAAATTGTAGTCTTTCGGAGGTCGTTTTGGTTAATGCTAGATACACGTGGTATGAAAAAAGAGAGTCCCCAGTGTTTACTAAAATTGACAGATTCTTTGTGACCAAAGAATGGTTGGACCTCTTCTCCAACGTGAATTCCAATCGGTTACAACGTATTACATCGAATCACTTCCCAATTTTACTTCAAGCTGGGAATTTCTCTTGGGGACTGATGCCTTTTAGATTTGAAAATGCTTGGCTATCCCATCTGAATTTCAGGAACTTGATAGATGGTTGGTGGAAGGAGCAAAATGTGGAAGGGTGGGCAGGGTATCAATTTATGGCCAAACTGAAAGACATTAAAGAAAACTTAAAAGGGTGGAACAAGGAAACCTTTGGTGCTATAAGAGATGAAAAAATCAAAGAGATGAAAAAACCAGAATTTGCCAGAGAATTGAGCAGCTAG

Protein sequence

MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQEPSFLAKRRVKKELLDNFLVVPISSKVETKTPRKNNSKQFGLNHNSKRYDQQGRPINISVNSEGASGGILVLWKEKEVKALEVVLGIYSLSVLFECGNQNQFLVTGVYGPSRPKGRNFFWRELYDLCGLCSGVWCIGGDFNVVRSIEEKSSRGRVTKSMRAFNCWVENCSLSEVVLVNARYTWYEKRESPVFTKIDRFFVTKEWLDLFSNVNSNRLQRITSNHFPILLQAGNFSWGLMPFRFENAWLSHLNFRNLIDGWWKEQNVEGWAGYQFMAKLKDIKENLKGWNKETFGAIRDEKIKEMKKPEFARELSS

Homology

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BLAST of Lag0036648 vs. NCBI nr
Match: XP_022936473.1 (uncharacterized protein LOC111443082 [Cucurbita moschata] >XP_023521112.1 uncharacterized protein LOC111784738 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.2 bits (801), Expect = 4.0e-81
Identity = 148/162 (91.36%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGC 60
           MQGAVLL AQPLRVKLLWS+++S GN SATAG GN SLMAAAGPKWAQKTV LPPHRRGC
Sbjct: 1   MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGC 60

Query: 61  HLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 120
           HLITPKIMKEIG+DLSEFKCG+AHIFLQHTSASLTINENYDSDVRSDTETFLN IVPEGT
Sbjct: 61  HLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGC LT+PITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQ 162

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BLAST of Lag0036648 vs. NCBI nr
Match: KAG6591177.1 (hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 311.2 bits (796), Expect = 1.5e-80
Identity = 147/162 (90.74%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGC 60
           MQGAVLL AQPLRVKLLW +++S GN SATAG GN SLMAAAGPKWAQKTV LPPHRRGC
Sbjct: 1   MQGAVLLAAQPLRVKLLWRNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGC 60

Query: 61  HLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 120
           HLITPKIMKEIG+DLSEFKCG+AHIFLQHTSASLTINENYDSDVRSDTETFLN IVPEGT
Sbjct: 61  HLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGC LT+PITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQ 162

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BLAST of Lag0036648 vs. NCBI nr
Match: XP_038897717.1 (UPF0047 protein C4A8.02c [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 3.4e-80
Identity = 146/162 (90.12%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGC 60
           MQGA+L  AQPLR+KLLW+S++S GN SATA +GN+SLMAAAGPKWAQKTV LPPHRRGC
Sbjct: 15  MQGAILSAAQPLRIKLLWNSNSSTGNSSATARSGNTSLMAAAGPKWAQKTVTLPPHRRGC 74

Query: 61  HLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 120
           HLITPKIMKEIG DLSEFKCG+AHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT
Sbjct: 75  HLITPKIMKEIGPDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 134

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGC LTIPITNGKFNMGTWQ
Sbjct: 135 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 176

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BLAST of Lag0036648 vs. NCBI nr
Match: XP_022976235.1 (uncharacterized protein LOC111476694 [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 1.7e-79
Identity = 147/162 (90.74%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGC 60
           MQGAVLL AQPLRVKLL S+++S GN SATAG GN SLMAAAGPKWAQKTV LPPHRRGC
Sbjct: 1   MQGAVLLAAQPLRVKLLGSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGC 60

Query: 61  HLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 120
           HLITPKIMKEIG DLSEFKCG+AHIFLQHTSASLTINENYDSDVRSDTETFLN IVPEGT
Sbjct: 61  HLITPKIMKEIGNDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGC LT+PITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQ 162

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BLAST of Lag0036648 vs. NCBI nr
Match: XP_008453044.1 (PREDICTED: UPF0047 protein YjbQ [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 5.4e-78
Identity = 144/162 (88.89%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGC 60
           MQGA++L AQPLRVKLL S+++S GN SATAG+ N SLMAAAGPKWAQKTV L PHRRGC
Sbjct: 1   MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSLMAAAGPKWAQKTVTLSPHRRGC 60

Query: 61  HLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 120
           HLITPKIMKEIGQDLSEFKCG+AHIFLQHTSASLTINENYDSDV+SDTETFLNKIVPEGT
Sbjct: 61  HLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNKIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSS+FGC LTIPITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKFNMGTWQ 162

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BLAST of Lag0036648 vs. ExPASy Swiss-Prot
Match: O14155 (UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4A8.02c PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.4e-28
Identity = 61/124 (49.19%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 48  QKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSD 107
           Q+ + L    +G ++IT  ++K++  +L  F  G  + F+QHTSA+LTINEN+D+D R+D
Sbjct: 5   QRIITLDRRSKGFYIITNDLVKKL-PELKSFSSGTVNFFIQHTSAALTINENWDADTRAD 64

Query: 108 TETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQEPSFL 167
               L+KIVPE  SA ++HT EG DDMPAH+KSS+ G  LT+PITNGK ++GTWQ+    
Sbjct: 65  MNDILDKIVPE--SAGYRHTAEGLDDMPAHVKSSLIGPSLTVPITNGKLSLGTWQDIQLA 124

Query: 168 AKRR 172
             RR
Sbjct: 125 EFRR 125

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BLAST of Lag0036648 vs. ExPASy Swiss-Prot
Match: P0AF49 (UPF0047 protein YjbQ OS=Escherichia coli O157:H7 OX=83334 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 5.5e-25
Identity = 55/117 (47.01%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 46  WAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVR 105
           W QKT+ L    RG HL+T +I+ ++  D+     G+ H+ LQHTSASLT+NEN D  VR
Sbjct: 2   WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVR 61

Query: 106 SDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
            D E F  + VP+  +  ++H  EG DDMP+HIKSSM G  L +P+  G+   GTWQ
Sbjct: 62  HDMERFFLRTVPD--NGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQ 115

[Close]

BLAST of Lag0036648 vs. ExPASy Swiss-Prot
Match: P0AF48 (UPF0047 protein YjbQ OS=Escherichia coli (strain K12) OX=83333 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 5.5e-25
Identity = 55/117 (47.01%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 46  WAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVR 105
           W QKT+ L    RG HL+T +I+ ++  D+     G+ H+ LQHTSASLT+NEN D  VR
Sbjct: 2   WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVR 61

Query: 106 SDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
            D E F  + VP+  +  ++H  EG DDMP+HIKSSM G  L +P+  G+   GTWQ
Sbjct: 62  HDMERFFLRTVPD--NGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQ 115

[Close]

BLAST of Lag0036648 vs. ExPASy Swiss-Prot
Match: P0A2L2 (UPF0047 protein YjbQ OS=Salmonella typhi OX=90370 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.1e-23
Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 46  WAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVR 105
           W Q+T+ L    RG HLIT +I  ++   L   + G+ H+ L HTSASLT+NEN D  VR
Sbjct: 2   WYQRTITLSEKPRGFHLITDEITDKL-SGLPPVETGLLHLLLLHTSASLTLNENCDPTVR 61

Query: 106 SDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           +D E    K VP+  +A ++H  EG DDMP+HIKSS+ G  L +P+  G+  +GTWQ
Sbjct: 62  ADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQ 115

[Close]

BLAST of Lag0036648 vs. ExPASy Swiss-Prot
Match: P0A2L1 (UPF0047 protein YjbQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.1e-23
Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 46  WAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVR 105
           W Q+T+ L    RG HLIT +I  ++   L   + G+ H+ L HTSASLT+NEN D  VR
Sbjct: 2   WYQRTITLSEKPRGFHLITDEITDKL-SGLPPVETGLLHLLLLHTSASLTLNENCDPTVR 61

Query: 106 SDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           +D E    K VP+  +A ++H  EG DDMP+HIKSS+ G  L +P+  G+  +GTWQ
Sbjct: 62  ADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQ 115

[Close]

BLAST of Lag0036648 vs. ExPASy TrEMBL
Match: A0A6J1FDC5 (uncharacterized protein LOC111443082 OS=Cucurbita moschata OX=3662 GN=LOC111443082 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.9e-81
Identity = 148/162 (91.36%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGC 60
           MQGAVLL AQPLRVKLLWS+++S GN SATAG GN SLMAAAGPKWAQKTV LPPHRRGC
Sbjct: 1   MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGC 60

Query: 61  HLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 120
           HLITPKIMKEIG+DLSEFKCG+AHIFLQHTSASLTINENYDSDVRSDTETFLN IVPEGT
Sbjct: 61  HLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGC LT+PITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQ 162

[Close]

BLAST of Lag0036648 vs. ExPASy TrEMBL
Match: A0A6J1IIX0 (uncharacterized protein LOC111476694 OS=Cucurbita maxima OX=3661 GN=LOC111476694 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 8.1e-80
Identity = 147/162 (90.74%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGC 60
           MQGAVLL AQPLRVKLL S+++S GN SATAG GN SLMAAAGPKWAQKTV LPPHRRGC
Sbjct: 1   MQGAVLLAAQPLRVKLLGSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGC 60

Query: 61  HLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 120
           HLITPKIMKEIG DLSEFKCG+AHIFLQHTSASLTINENYDSDVRSDTETFLN IVPEGT
Sbjct: 61  HLITPKIMKEIGNDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGC LT+PITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQ 162

[Close]

BLAST of Lag0036648 vs. ExPASy TrEMBL
Match: A0A1S3BUP9 (UPF0047 protein YjbQ OS=Cucumis melo OX=3656 GN=LOC103493869 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.6e-78
Identity = 144/162 (88.89%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGC 60
           MQGA++L AQPLRVKLL S+++S GN SATAG+ N SLMAAAGPKWAQKTV L PHRRGC
Sbjct: 1   MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSLMAAAGPKWAQKTVTLSPHRRGC 60

Query: 61  HLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 120
           HLITPKIMKEIGQDLSEFKCG+AHIFLQHTSASLTINENYDSDV+SDTETFLNKIVPEGT
Sbjct: 61  HLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNKIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSS+FGC LTIPITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKFNMGTWQ 162

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BLAST of Lag0036648 vs. ExPASy TrEMBL
Match: A0A0A0L4Q6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665660 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.9e-77
Identity = 141/163 (86.50%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MQGAVLLTAQPLRVKLLWSSDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGC 60
           MQGA++L AQPLRVKLL S+++S GN SATAG+ N S MAAAGPKWAQKTV L PHRRGC
Sbjct: 1   MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGC 60

Query: 61  HLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 120
           HLITPKIMKEIGQDLSEFKCG+AHIFLQHTSASLTINENYDSDV++DTETFLNKIVPEGT
Sbjct: 61  HLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQE 164
           SAPWKHTLEGPDDMPAHIKSS+FGC LTIPITNGK NMGTWQ+
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQK 163

[Close]

BLAST of Lag0036648 vs. ExPASy TrEMBL
Match: A0A6J1DDZ9 (uncharacterized protein LOC111019630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019630 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.5e-73
Identity = 142/166 (85.54%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 1   MQGAVLLT--AQPLRVKLLWS--SDTSRGNQSATAGTGNSSLMAAAGPKWAQKTVMLPPH 60
           MQGAVLL   AQP+RVKL  S   +TS G+ SA+AG+G  S MAAAGPKWAQKTV LPPH
Sbjct: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLSEFKCGIAHIFLQHTSASLTINENYDSDVRSDTETFLNKIV 120
           RRGCHLITPKIMKEIGQDL+EFKCG+AHIFLQHTSASLTINENYDSDVRSDTETFLN+IV
Sbjct: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCDLTIPITNGKFNMGTWQ 163
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGC LTIPITNG FNMGTWQ
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQ 166

[Close]

BLAST of Lag0036648 vs. TAIR 10
Match: AT1G21065.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). )

HSP 1 Score: 228.4 bits (581), Expect = 1.2e-59
Identity = 101/134 (75.37%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 29  ATAGTGNSSLMAAAGPKWAQKTVMLPPHRRGCHLITPKIMKEIGQDLSEFKCGIAHIFLQ 88
           A   T  +S+ +++G KWAQKT+ LPP RRGCHLITPKI+KEI +DLS+F CG+AH+FLQ
Sbjct: 61  ANPATDRASMASSSGAKWAQKTITLPPLRRGCHLITPKILKEIREDLSDFNCGLAHVFLQ 120

Query: 89  HTSASLTINENYDSDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCDLT 148
           HTSASLTINENYD DV++DTETFLN+IVPEG SAPW+HT+EGPDDMPAHIKSSMFGC LT
Sbjct: 121 HTSASLTINENYDPDVQADTETFLNRIVPEGNSAPWRHTMEGPDDMPAHIKSSMFGCQLT 180

Query: 149 IPITNGKFNMGTWQ 163
           IPIT GK +MGTWQ
Sbjct: 181 IPITKGKLSMGTWQ 194

The following BLAST results are available for this feature:

BLAST of Lag0036648 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936473.1	4.0e-81	91.36	uncharacterized protein LOC111443082 [Cucurbita moschata] >XP_023521112.1 unchar...	[more]
KAG6591177.1	1.5e-80	90.74	hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038897717.1	3.4e-80	90.12	UPF0047 protein C4A8.02c [Benincasa hispida]	[more]
XP_022976235.1	1.7e-79	90.74	uncharacterized protein LOC111476694 [Cucurbita maxima]	[more]
XP_008453044.1	5.4e-78	88.89	PREDICTED: UPF0047 protein YjbQ [Cucumis melo]	[more]

BLAST of Lag0036648 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O14155	2.4e-28	49.19	UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
P0AF49	5.5e-25	47.01	UPF0047 protein YjbQ OS=Escherichia coli O157:H7 OX=83334 GN=yjbQ PE=3 SV=1	[more]
P0AF48	5.5e-25	47.01	UPF0047 protein YjbQ OS=Escherichia coli (strain K12) OX=83333 GN=yjbQ PE=3 SV=1	[more]
P0A2L2	5.1e-23	46.15	UPF0047 protein YjbQ OS=Salmonella typhi OX=90370 GN=yjbQ PE=3 SV=1	[more]
P0A2L1	5.1e-23	46.15	UPF0047 protein YjbQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700...	[more]

BLAST of Lag0036648 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDC5	1.9e-81	91.36	uncharacterized protein LOC111443082 OS=Cucurbita moschata OX=3662 GN=LOC1114430...	[more]
A0A6J1IIX0	8.1e-80	90.74	uncharacterized protein LOC111476694 OS=Cucurbita maxima OX=3661 GN=LOC111476694...	[more]
A0A1S3BUP9	2.6e-78	88.89	UPF0047 protein YjbQ OS=Cucumis melo OX=3656 GN=LOC103493869 PE=3 SV=1	[more]
A0A0A0L4Q6	4.9e-77	86.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665660 PE=3 SV=1	[more]
A0A6J1DDZ9	1.5e-73	85.54	uncharacterized protein LOC111019630 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lag0036648 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21065.1	1.2e-59	75.37	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 183..391 e-value: 4.1E-22 score: 81.1
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 223..390
IPR001602	Uncharacterised protein family UPF0047	PFAM	PF01894	UPF0047	coord: 63..163 e-value: 2.5E-31 score: 108.2
IPR001602	Uncharacterised protein family UPF0047	TIGRFAM	TIGR00149	TIGR00149	coord: 50..166 e-value: 8.3E-31 score: 104.4
IPR001602	Uncharacterised protein family UPF0047	PANTHER	PTHR30615	UNCHARACTERIZED PROTEIN YJBQ-RELATED	coord: 23..163
IPR035917	YjbQ-like superfamily	GENE3D	2.60.120.460		coord: 40..176 e-value: 3.4E-39 score: 135.9
IPR035917	YjbQ-like superfamily	SUPERFAMILY	111038	YjbQ-like	coord: 46..164
None	No IPR available	PANTHER	PTHR30615:SF14	SUBFAMILY NOT NAMED	coord: 23..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0036648.1	Lag0036648.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane