Lag0036507 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0036507
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionULP_PROTEASE domain-containing protein
Locationchr3: 47604545 .. 47606896 (-)
RNA-Seq ExpressionLag0036507
SyntenyLag0036507
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGAAAGTGAGACGGTCAATGGAGTTCTCTTAGGAAAACATAATGCCAAAGTGTTTGTTGACATGATCTTTGTCGAAAAAGAGAACCCTCACATTCCAATTTCAGTGAAAGGTGAGATAGAGTTTCTCTCCCAATCTATAGGTGTTGCAGTTGTTTGGCCTCGTGCTTTGGTTGCTATATGTAAAGATAAGGTATGTTTCTCTCGAACATATATTTAATTTGAAATGTATGTCAATGCCCCTATATATATCACATCTCAAATATATTGTGTTTTCATTTTTTTATAGGACTTGAAACATAAACCAGTGATAAAACATTCATTTCCTAATTCAGGAATCACACCTTCATCTATCAAATTCTTGTATCGCTATACCGAAAAGTAGGGGTGACCATCGGTCGGTCGGCGTCGGTTTTGTACTCAAACCGACGCCGATCACCGACATATAGGTTTTTAGCAGTCGATTCTTGTTGGGGTTTGGAATGGATTTATTACGCCGACCGACCGACTACACCGACGGTCGGTCGGTTTGGATCGGTTTTAAGAATGCAATACAAAGAAGATAAAAACAAAGGAAAGAAAACAGAAAAAGAAGAAAGAAAAAACATACATACCTCGATTTCAAGCTTGAAAATTTCGGGAGAAGAAGATAAAAAAAAACAAAACAAAAAAAAAAAAAAAAAACAGGCGGCCATCGACGCGAAAAGAAAAGGAAAATGGATGTCTGAAAGATAAAAAAAAAAAAGAAGATAGAAATTGAGATGGGAGAGAAAGAGTTGTAATATTAAAATAACTATTTTTTATAGGAAACATAAACCATTCACTACAAGAATTAAAAGATTTCCTGACGGTTTTTCTCCCGACGTGAAAAAAATCGTGGACAAATATAGGCAATTCCAACGATAATTTGACCGTTGGGATATATATAGGTAATGCCAACGGTTTTATAAAACCGTTGGCATATGTATACGAAATCCCAACGATATTTTTATCTGTTGGCAAATACATACAAAATCCCCACGGTTCTACGGTAGCCGTGGGCAAATACATACGAAATCTCAAAGGGTTGAAATAATAATTTATTTGGTTCGTTAGTATAGCCAACGGTTTGTATAAACCGTTGGTATATGTATAGGAAATCCCAACGGTTTATAGAAACCGTTGGTATATCTATAAACAATCCCAACGGTTTAAAAACCGTAGGCATATATTTAGAAAATCCCAAAGGTTTGGTTCGCTGGTATAGCCGACGGTTTATTTAAACCGTTGGCATATATATAGGAAATGCCAACGGCTGTTGAATCCGTAGGGAAATATTTAGGAATTTTTTTGGTTCATTTTATAGCCATCGATTTAGTTAAACCGTGGGTGGTTCTTCGTCCTATGGCAACGGTTCGGTGGGACCGTCGGTGGTTCATGTATTTGTCGACGGTTCATTTAAGCCGTAGGGAGTTGTTGGAATTCCAACAGACCGATGGTTGATTAATTTACCAACGATTTAATGGAACCGTCGATTTATCATTATTATTCCCAACGGTTGAGTTAAACCGTGGGTAGATTTTATTAAAATTCCCCTTTTCACGATTGATTTCCCTCATTTTCTCCCATTACGCGCTTTCTTCCCTCCCTTTCTCCCATTTTCGTTCCATTTTCATCCACATCCTCTCCATTCTCCATTTTTGCCCATTTGAGTTTCAGTCTTTGCCGCCACCGTTTGAGTTTCAGTCTTCCCCACTGTCGTCTCCGTTCGTCTTCCCGATTTCTGGCTTCGTTTCAGATTCAGGTATGTTTCGTTCATTTGTTCTTCTTGTTCTTCGTGATTTGAATGCCTTTTCTCCATTCTCCAAACCCTAGCCACCATTTTGTTTTTGTGTTGAAATGAAAGGGAAGGGTTTTTTGTGACTGTTTTGGGTCAATTCCACTAAATCCGTGCAAGAACATTGCGATTTTTTTATGTTTATTCCTTTTCCTTTTACAATGGCTACTTCGGGCGTTCAGAATTAGGGCCAGAAGGCTGTGAAATTGTTCGTTTACTTGTTGTGAATTCTGTTGAGAGGGTTTTGGAGTGTGTAGTTCACTAATTAGTGGTTGTTGGCTTGGTCTTAGTCTTACTCGAGGGTTCAATTTTGTTAAGTTTCCATTGAATGTTGGCTTTTATTTTCCTCTATGCTCAGAAGCTTTCTCAGGATTTCTGGTCACAAACGTGACTTCCTGCTTTTGTCATGGCTTTTGGTGTGTTTGTTTCTAATCAGTGTGTTTGTTTTGTAGTTTTAGTTTGGTCATATCATCAGCCTCGATTGGTGACTGCGACCGCAACTCTGTTGTGGAACTTCTATTGTTTCCCCCATAA

mRNA sequence

ATGCTCGAAAGTGAGACGGTCAATGGAGTTCTCTTAGGAAAACATAATGCCAAAGTGTTTGTTGACATGATCTTTGTCGAAAAAGAGAACCCTCACATTCCAATTTCAGTGAAAGGTGAGATAGAGTTTCTCTCCCAATCTATAGGTGTTGCAGTTGTTTGGCCTCGTGCTTTGGTTGCTATATGTAAAGATAAGTCTTTGCCGCCACCGTTTGAGTTTCAGTCTTCCCCACTGTCGTCTCCGTTCGTCTTCCCGATTTCTGGCTTCGTTTCAGATTCAGAATTAGGGCCAGAAGGCTGTGAAATTGTTCGTTTACTTGTTGTGAATTCTGTTGAGAGGGTTTTGGATTTTAGTTTGGTCATATCATCAGCCTCGATTGGTGACTGCGACCGCAACTCTGTTGTGGAACTTCTATTGTTTCCCCCATAA

Coding sequence (CDS)

ATGCTCGAAAGTGAGACGGTCAATGGAGTTCTCTTAGGAAAACATAATGCCAAAGTGTTTGTTGACATGATCTTTGTCGAAAAAGAGAACCCTCACATTCCAATTTCAGTGAAAGGTGAGATAGAGTTTCTCTCCCAATCTATAGGTGTTGCAGTTGTTTGGCCTCGTGCTTTGGTTGCTATATGTAAAGATAAGTCTTTGCCGCCACCGTTTGAGTTTCAGTCTTCCCCACTGTCGTCTCCGTTCGTCTTCCCGATTTCTGGCTTCGTTTCAGATTCAGAATTAGGGCCAGAAGGCTGTGAAATTGTTCGTTTACTTGTTGTGAATTCTGTTGAGAGGGTTTTGGATTTTAGTTTGGTCATATCATCAGCCTCGATTGGTGACTGCGACCGCAACTCTGTTGTGGAACTTCTATTGTTTCCCCCATAA

Protein sequence

MLESETVNGVLLGKHNAKVFVDMIFVEKENPHIPISVKGEIEFLSQSIGVAVVWPRALVAICKDKSLPPPFEFQSSPLSSPFVFPISGFVSDSELGPEGCEIVRLLVVNSVERVLDFSLVISSASIGDCDRNSVVELLLFPP
Homology
[Close]
BLAST of Lag0036507 vs. NCBI nr
Match: KAE8649224.1 (hypothetical protein Csa_014966 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 8.1e-06
Identity = 33/81 (40.74%), Postives = 51/81 (62.96%), Query Frame = 0 

Query: 2   LESETVNGVLLGKHNAKVFVDMIFVEKENPHIPISVKGEIEFLSQSIGVAVVWPRALVAI 61
           ++  T++G+ LG  N +V VD+I V  E+  +PI +KGEIE L+Q+IG  V WPR LV +
Sbjct: 395 VQCPTIHGIPLGADNIRVTVDVIMV--EDVALPIPLKGEIETLNQAIGNFVAWPRKLVIL 454

Query: 62  CKDKSLPPPFEFQSSPLSSPF 83
            ++K  P     +S+  SS +
Sbjct: 455 TQEKKAPSMAATESTTQSSKY 473

[Close]
BLAST of Lag0036507 vs. NCBI nr
Match: XP_031740251.1 (uncharacterized protein LOC101213947 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 8.1e-06
Identity = 33/81 (40.74%), Postives = 51/81 (62.96%), Query Frame = 0 

Query: 2   LESETVNGVLLGKHNAKVFVDMIFVEKENPHIPISVKGEIEFLSQSIGVAVVWPRALVAI 61
           ++  T++G+ LG  N +V VD+I V  E+  +PI +KGEIE L+Q+IG  V WPR LV +
Sbjct: 399 VQCPTIHGIPLGADNIRVTVDVIMV--EDVALPIPLKGEIETLNQAIGNFVAWPRKLVIL 458

Query: 62  CKDKSLPPPFEFQSSPLSSPF 83
            ++K  P     +S+  SS +
Sbjct: 459 TQEKKAPSMAATESTTQSSKY 477

[Close]
BLAST of Lag0036507 vs. NCBI nr
Match: XP_008451868.1 (PREDICTED: uncharacterized protein LOC103493028 isoform X1 [Cucumis melo] >XP_008451869.1 PREDICTED: uncharacterized protein LOC103493028 isoform X1 [Cucumis melo] >XP_016901189.1 PREDICTED: uncharacterized protein LOC103493028 isoform X1 [Cucumis melo] >KAA0040180.1 uncharacterized protein E6C27_scaffold118G00160 [Cucumis melo var. makuwa] >TYK16450.1 uncharacterized protein E5676_scaffold21G002480 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-05
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0 

Query: 2   LESETVNGVLLGKHNAKVFVDMIFVEKENPHIPISVKGEIEFLSQSIGVAVVWPRALVAI 61
           ++  T++G+ LG  N +V VD+  V  E+  +PI +KG+IE L+Q+IG  V WPR LV +
Sbjct: 395 VQCPTIHGIPLGAENIRVTVDIAMV--EDVALPIPLKGDIETLNQAIGNFVAWPRKLVIV 454

Query: 62  CKDKSLPPPFEFQSSPLSSPF 83
            K+K  P     +S+  SS +
Sbjct: 455 TKEKKAPSLTASESTTQSSKY 473

[Close]
BLAST of Lag0036507 vs. NCBI nr
Match: XP_016901190.1 (PREDICTED: uncharacterized protein LOC103493028 isoform X2 [Cucumis melo])

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-05
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0 

Query: 2   LESETVNGVLLGKHNAKVFVDMIFVEKENPHIPISVKGEIEFLSQSIGVAVVWPRALVAI 61
           ++  T++G+ LG  N +V VD+  V  E+  +PI +KG+IE L+Q+IG  V WPR LV +
Sbjct: 395 VQCPTIHGIPLGAENIRVTVDIAMV--EDVALPIPLKGDIETLNQAIGNFVAWPRKLVIV 454

Query: 62  CKDKSLPPPFEFQSSPLSSPF 83
            K+K  P     +S+  SS +
Sbjct: 455 TKEKKAPSLTASESTTQSSKY 473

[Close]
BLAST of Lag0036507 vs. NCBI nr
Match: XP_022136080.1 (uncharacterized protein LOC111007859 isoform X4 [Momordica charantia])

HSP 1 Score: 58.5 bits (140), Expect = 5.3e-05
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 2   LESETVNGVLLGKHNAKVFVDMIFVEKENPHIPISVKGEIEFLSQSIGVAVVWPRALVAI 61
           ++  TV+GV LG  N +V VD++    E   IPI V+GEIE L+Q+IG  V WPR LV +
Sbjct: 349 VQCPTVHGVPLGVDNVRVMVDIVI--DEYATIPIPVRGEIETLNQTIGGFVAWPRRLVIL 408

Query: 62  CKDKSL 68
            ++K++
Sbjct: 409 SEEKNI 412

The following BLAST results are available for this feature:
BLAST of Lag0036507 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649224.18.1e-0640.74hypothetical protein Csa_014966 [Cucumis sativus][more]
XP_031740251.18.1e-0640.74uncharacterized protein LOC101213947 [Cucumis sativus][more]
XP_008451868.11.8e-0539.51PREDICTED: uncharacterized protein LOC103493028 isoform X1 [Cucumis melo] >XP_00... [more]
XP_016901190.11.8e-0539.51PREDICTED: uncharacterized protein LOC103493028 isoform X2 [Cucumis melo][more]
XP_022136080.15.3e-0545.45uncharacterized protein LOC111007859 isoform X4 [Momordica charantia][more]
BLAST of Lag0036507 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0036507.1Lag0036507.1mRNA