Lag0036293 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGAAACGATCTTAGAACAAGTTTTACACTGTACCACTGCAAAAGAAATTTGGTCATATCTTCTTCAGATTTTTAATTCTAGACACCTAGCACAGATAATGAAGATTAAAGTCAAATTACAGAATATACAAAAAGGAGGATCGTCTATGAATGAGTATGTATCGAAAATTAAAAAATGCATTGATGCCCTAGCTGCAATAGGAAAAACAGTCCTTGTGGAAGATCATATTATGTATATTTTGGCTGGATTGGGATCTGAATATGAAATAATAGTTTATGTTATTACTGCCAAGACTAGTACTCAAAATGTGCAAGATGTTATTGCTTTATTACTAACACATGAGAGTAGAATCGAAAGCAAAAATTCAATCAATGCAGATGGAGTCCTTCCTACAGCAAATCTTATAGTACAAAATCGTATTCAGAAGGAAAATGATTCTCAGAAATTGATAAATCAGAAGCAACAACAGCAAAATTTTGGTAATAATAGAGGTAGATGA ATGACTGAAACGATCTTAGAACAAGTTTTACACTGTACCACTGCAAAAGAAATTTGGTCATATCTTCTTCAGATTTTTAATTCTAGACACCTAGCACAGATAATGAAGATTAAAGTCAAATTACAGAATATACAAAAAGGAGGATCGTCTATGAATGAGTATGTATCGAAAATTAAAAAATGCATTGATGCCCTAGCTGCAATAGGAAAAACAGTCCTTGTGGAAGATCATATTATGTATATTTTGGCTGGATTGGGATCTGAATATGAAATAATAGTTTATGTTATTACTGCCAAGACTAGTACTCAAAATGTGCAAGATGTTATTGCTTTATTACTAACACATGAGAGTAGAATCGAAAGCAAAAATTCAATCAATGCAGATGGAGTCCTTCCTACAGCAAATCTTATAGTACAAAATCGTATTCAGAAGGAAAATGATTCTCAGAAATTGATAAATCAGAAGCAACAACAGCAAAATTTTGGTAATAATAGAGGTAGATGA ATGACTGAAACGATCTTAGAACAAGTTTTACACTGTACCACTGCAAAAGAAATTTGGTCATATCTTCTTCAGATTTTTAATTCTAGACACCTAGCACAGATAATGAAGATTAAAGTCAAATTACAGAATATACAAAAAGGAGGATCGTCTATGAATGAGTATGTATCGAAAATTAAAAAATGCATTGATGCCCTAGCTGCAATAGGAAAAACAGTCCTTGTGGAAGATCATATTATGTATATTTTGGCTGGATTGGGATCTGAATATGAAATAATAGTTTATGTTATTACTGCCAAGACTAGTACTCAAAATGTGCAAGATGTTATTGCTTTATTACTAACACATGAGAGTAGAATCGAAAGCAAAAATTCAATCAATGCAGATGGAGTCCTTCCTACAGCAAATCTTATAGTACAAAATCGTATTCAGAAGGAAAATGATTCTCAGAAATTGATAAATCAGAAGCAACAACAGCAAAATTTTGGTAATAATAGAGGTAGATGA MTETILEQVLHCTTAKEIWSYLLQIFNSRHLAQIMKIKVKLQNIQKGGSSMNEYVSKIKKCIDALAAIGKTVLVEDHIMYILAGLGSEYEIIVYVITAKTSTQNVQDVIALLLTHESRIESKNSINADGVLPTANLIVQNRIQKENDSQKLINQKQQQQNFGNNRGR Homology
BLAST of Lag0036293 vs. NCBI nr
Match: XP_022136882.1 (dr1-associated corepressor homolog isoform X1 [Momordica charantia]) HSP 1 Score: 143.7 bits (361), Expect = 1.5e-30 Identity = 78/160 (48.75%), Postives = 111/160 (69.38%), Query Frame = 0
BLAST of Lag0036293 vs. NCBI nr
Match: XP_022136883.1 (dr1-associated corepressor homolog isoform X2 [Momordica charantia]) HSP 1 Score: 143.7 bits (361), Expect = 1.5e-30 Identity = 78/160 (48.75%), Postives = 111/160 (69.38%), Query Frame = 0
BLAST of Lag0036293 vs. NCBI nr
Match: KAA0045111.1 (putative glutathione S-transferase isoform X1 [Cucumis melo var. makuwa] >TYK23627.1 putative glutathione S-transferase isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 140.6 bits (353), Expect = 1.2e-29 Identity = 74/141 (52.48%), Postives = 106/141 (75.18%), Query Frame = 0
BLAST of Lag0036293 vs. NCBI nr
Match: KAA0046195.1 (putative Ty1-copia-like retrotransposon [Cucumis melo var. makuwa] >TYK14162.1 putative Ty1-copia-like retrotransposon [Cucumis melo var. makuwa]) HSP 1 Score: 137.9 bits (346), Expect = 8.1e-29 Identity = 74/151 (49.01%), Postives = 111/151 (73.51%), Query Frame = 0
BLAST of Lag0036293 vs. NCBI nr
Match: XP_022158089.1 (uncharacterized protein LOC111024658 [Momordica charantia]) HSP 1 Score: 136.7 bits (343), Expect = 1.8e-28 Identity = 78/174 (44.83%), Postives = 116/174 (66.67%), Query Frame = 0
BLAST of Lag0036293 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.5e-06 Identity = 42/158 (26.58%), Postives = 81/158 (51.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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