Lag0035757 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTTGCTTCAGGCTTCCTAACAATGTGTGTGAGGACATTAACCAGATTTGCACTAAGTTTTGGTGGGGCTCGATGGGAGATAAAAAGAAGATGCATTGGATGAGTTGGAAGAACCTCTGCAGAAGCAAGGATATCAAGGGGTTGGGATTCAGGGAGCTTAGGACATTCAACCAAGCTATGCTAGCTAAGTTTAGTTGGTGCATCCTTAGAAATTCGAACAACCTCCTAGCTAAGACATTAAAAGGGAGGTACTTTAAACATGGAAATTTTATCAAAGTTAAAATAGGGACCAGTCTATCTTTAGCCTGGAGGAGTATTATTTAGGGAAGGAACCTCTTTTTGAAAGGTTATAGATGGAAAGTAGACAATGGTAGATACATCGAGCTTGCCAAGGATCCGTGGATCAACAGAGAAGGGAGTAGCAAGCCACTCGTAGTTTCAGAGAATCTCAAAGGCCTAAAAGTCAAATGCTTGATTGATGAAAATAACAGATGGATAGTCTCCAAGATAAAAGAAAGTTTTCTACAGGAAGATGTGGATGAGATTTTGAACATTCCTTTAGGAGTGGCCACGTCTAAAGATGAGATTGTTTGGAAGTATGATAAAAGAGGGTCCTTCACAGTCAAGAGTGCCTATCGTCTTGCTTTTTCTATATCTAGGGCCAAGGATCCTTCTTCCTCCAATGCGTATTCTACCGAATTTAGTCTGGAAAAGGCTGTGGAAACTCCCTGTCATCCCTAGAGAAAGATCTCAGTTTGGAAAATCATTAACGATATCATCCCCAACAAATGTAATATCCAGAATAGAGGAATTGACAATTCTCCCTTTTGTGTTTTGTGCAGTCCACAGTGCACATAATATGAGAGTGCAAGAAGGTAAAAAAGGCTTAGTTAGAAGCTGTTCCTAGCTCATCTATGCCTTTTTCTATTTGCAGGTCAAGATGGAGTAGCATGGATTATTGGGAATGGCTTACCAACAACCCAGATGCAGAGGAATTGGAGAAGGCTATCCTAACGATGTGGAATATTTTGCAGTTCAAGAATCAAATTCTCAACAACAACAAAGTTAAGCCAGCTGATTCCAAACTTCCAATTCTTGTAGCAAAGAGTATCAACGAGTCTATTGGAAGAAAATAA ATGCGTTGCTTCAGGCTTCCTAACAATGTGTGTGAGGACATTAACCAGATTTGCACTAAGTTTTGGTGGGGCTCGATGGGAGATAAAAAGAAGATGCATTGGATGAGTTGGAAGAACCTCTGCAGAAGCAAGGATATCAAGGGGTTGGGATTCAGGGAGCTTAGGACATTCAACCAAGCTATGCTAGCTAAGTTTAGTTGGTGCATCCTTAGAAATTCGAACAACCTCCTAGCTAAGACATTAAAAGGGAGATGGAAAGTAGACAATGGTAGATACATCGAGCTTGCCAAGGATCCGTGGATCAACAGAGAAGGGAGTAGCAAGCCACTCGTAGTTTCAGAGAATCTCAAAGGCCTAAAAGTCAAATGCTTGATTGATGAAAATAACAGATGGATAGTCTCCAAGATAAAAGAAAGTTTTCTACAGGAAGATGTGGATGAGATTTTGAACATTCCTTTAGGAGTGGCCACGTCTAAAGATGAGATTGTTTGGAAGTCAAGATGGAGTAGCATGGATTATTGGGAATGGCTTACCAACAACCCAGATGCAGAGGAATTGGAGAAGGCTATCCTAACGATGTGGAATATTTTGCAGTTCAAGAATCAAATTCTCAACAACAACAAAGTTAAGCCAGCTGATTCCAAACTTCCAATTCTTGTAGCAAAGAGTATCAACGAGTCTATTGGAAGAAAATAA ATGCGTTGCTTCAGGCTTCCTAACAATGTGTGTGAGGACATTAACCAGATTTGCACTAAGTTTTGGTGGGGCTCGATGGGAGATAAAAAGAAGATGCATTGGATGAGTTGGAAGAACCTCTGCAGAAGCAAGGATATCAAGGGGTTGGGATTCAGGGAGCTTAGGACATTCAACCAAGCTATGCTAGCTAAGTTTAGTTGGTGCATCCTTAGAAATTCGAACAACCTCCTAGCTAAGACATTAAAAGGGAGATGGAAAGTAGACAATGGTAGATACATCGAGCTTGCCAAGGATCCGTGGATCAACAGAGAAGGGAGTAGCAAGCCACTCGTAGTTTCAGAGAATCTCAAAGGCCTAAAAGTCAAATGCTTGATTGATGAAAATAACAGATGGATAGTCTCCAAGATAAAAGAAAGTTTTCTACAGGAAGATGTGGATGAGATTTTGAACATTCCTTTAGGAGTGGCCACGTCTAAAGATGAGATTGTTTGGAAGTCAAGATGGAGTAGCATGGATTATTGGGAATGGCTTACCAACAACCCAGATGCAGAGGAATTGGAGAAGGCTATCCTAACGATGTGGAATATTTTGCAGTTCAAGAATCAAATTCTCAACAACAACAAAGTTAAGCCAGCTGATTCCAAACTTCCAATTCTTGTAGCAAAGAGTATCAACGAGTCTATTGGAAGAAAATAA MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQAMLAKFSWCILRNSNNLLAKTLKGRWKVDNGRYIELAKDPWINREGSSKPLVVSENLKGLKVKCLIDENNRWIVSKIKESFLQEDVDEILNIPLGVATSKDEIVWKSRWSSMDYWEWLTNNPDAEELEKAILTMWNILQFKNQILNNNKVKPADSKLPILVAKSINESIGRK Homology
BLAST of Lag0035757 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia]) HSP 1 Score: 161.8 bits (408), Expect = 7.2e-36 Identity = 77/199 (38.69%), Postives = 111/199 (55.78%), Query Frame = 0
BLAST of Lag0035757 vs. NCBI nr
Match: XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia]) HSP 1 Score: 138.7 bits (348), Expect = 6.5e-29 Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 0
BLAST of Lag0035757 vs. NCBI nr
Match: XP_023880941.1 (uncharacterized protein LOC111993328 [Quercus suber]) HSP 1 Score: 138.7 bits (348), Expect = 6.5e-29 Identity = 81/274 (29.56%), Postives = 123/274 (44.89%), Query Frame = 0
BLAST of Lag0035757 vs. NCBI nr
Match: XP_030486817.1 (uncharacterized protein LOC115703723 [Cannabis sativa]) HSP 1 Score: 137.5 bits (345), Expect = 1.5e-28 Identity = 72/208 (34.62%), Postives = 103/208 (49.52%), Query Frame = 0
BLAST of Lag0035757 vs. NCBI nr
Match: XP_024033483.1 (uncharacterized protein LOC112095606 [Citrus clementina]) HSP 1 Score: 134.8 bits (338), Expect = 9.4e-28 Identity = 64/173 (36.99%), Postives = 101/173 (58.38%), Query Frame = 0
BLAST of Lag0035757 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16 Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of Lag0035757 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 6.4e-11 Identity = 32/106 (30.19%), Postives = 55/106 (51.89%), Query Frame = 0
BLAST of Lag0035757 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 3.5e-36 Identity = 77/199 (38.69%), Postives = 111/199 (55.78%), Query Frame = 0
BLAST of Lag0035757 vs. ExPASy TrEMBL
Match: A0A6J1BRN0 (uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004787 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 3.2e-29 Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 0
BLAST of Lag0035757 vs. ExPASy TrEMBL
Match: A0A2N9EWI8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6846 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 5.4e-29 Identity = 67/174 (38.51%), Postives = 108/174 (62.07%), Query Frame = 0
BLAST of Lag0035757 vs. ExPASy TrEMBL
Match: A0A2N9F0P5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8333 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 2.7e-28 Identity = 62/171 (36.26%), Postives = 104/171 (60.82%), Query Frame = 0
BLAST of Lag0035757 vs. ExPASy TrEMBL
Match: A0A803Q8H5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 3.5e-28 Identity = 69/179 (38.55%), Postives = 96/179 (53.63%), Query Frame = 0
BLAST of Lag0035757 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 87.4 bits (215), Expect = 1.6e-17 Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of Lag0035757 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 9.8e-15 Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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