Lag0035757 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035757
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr3: 29726391 .. 29727529 (-)
RNA-Seq ExpressionLag0035757
SyntenyLag0035757
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTTGCTTCAGGCTTCCTAACAATGTGTGTGAGGACATTAACCAGATTTGCACTAAGTTTTGGTGGGGCTCGATGGGAGATAAAAAGAAGATGCATTGGATGAGTTGGAAGAACCTCTGCAGAAGCAAGGATATCAAGGGGTTGGGATTCAGGGAGCTTAGGACATTCAACCAAGCTATGCTAGCTAAGTTTAGTTGGTGCATCCTTAGAAATTCGAACAACCTCCTAGCTAAGACATTAAAAGGGAGGTACTTTAAACATGGAAATTTTATCAAAGTTAAAATAGGGACCAGTCTATCTTTAGCCTGGAGGAGTATTATTTAGGGAAGGAACCTCTTTTTGAAAGGTTATAGATGGAAAGTAGACAATGGTAGATACATCGAGCTTGCCAAGGATCCGTGGATCAACAGAGAAGGGAGTAGCAAGCCACTCGTAGTTTCAGAGAATCTCAAAGGCCTAAAAGTCAAATGCTTGATTGATGAAAATAACAGATGGATAGTCTCCAAGATAAAAGAAAGTTTTCTACAGGAAGATGTGGATGAGATTTTGAACATTCCTTTAGGAGTGGCCACGTCTAAAGATGAGATTGTTTGGAAGTATGATAAAAGAGGGTCCTTCACAGTCAAGAGTGCCTATCGTCTTGCTTTTTCTATATCTAGGGCCAAGGATCCTTCTTCCTCCAATGCGTATTCTACCGAATTTAGTCTGGAAAAGGCTGTGGAAACTCCCTGTCATCCCTAGAGAAAGATCTCAGTTTGGAAAATCATTAACGATATCATCCCCAACAAATGTAATATCCAGAATAGAGGAATTGACAATTCTCCCTTTTGTGTTTTGTGCAGTCCACAGTGCACATAATATGAGAGTGCAAGAAGGTAAAAAAGGCTTAGTTAGAAGCTGTTCCTAGCTCATCTATGCCTTTTTCTATTTGCAGGTCAAGATGGAGTAGCATGGATTATTGGGAATGGCTTACCAACAACCCAGATGCAGAGGAATTGGAGAAGGCTATCCTAACGATGTGGAATATTTTGCAGTTCAAGAATCAAATTCTCAACAACAACAAAGTTAAGCCAGCTGATTCCAAACTTCCAATTCTTGTAGCAAAGAGTATCAACGAGTCTATTGGAAGAAAATAA

mRNA sequence

ATGCGTTGCTTCAGGCTTCCTAACAATGTGTGTGAGGACATTAACCAGATTTGCACTAAGTTTTGGTGGGGCTCGATGGGAGATAAAAAGAAGATGCATTGGATGAGTTGGAAGAACCTCTGCAGAAGCAAGGATATCAAGGGGTTGGGATTCAGGGAGCTTAGGACATTCAACCAAGCTATGCTAGCTAAGTTTAGTTGGTGCATCCTTAGAAATTCGAACAACCTCCTAGCTAAGACATTAAAAGGGAGATGGAAAGTAGACAATGGTAGATACATCGAGCTTGCCAAGGATCCGTGGATCAACAGAGAAGGGAGTAGCAAGCCACTCGTAGTTTCAGAGAATCTCAAAGGCCTAAAAGTCAAATGCTTGATTGATGAAAATAACAGATGGATAGTCTCCAAGATAAAAGAAAGTTTTCTACAGGAAGATGTGGATGAGATTTTGAACATTCCTTTAGGAGTGGCCACGTCTAAAGATGAGATTGTTTGGAAGTCAAGATGGAGTAGCATGGATTATTGGGAATGGCTTACCAACAACCCAGATGCAGAGGAATTGGAGAAGGCTATCCTAACGATGTGGAATATTTTGCAGTTCAAGAATCAAATTCTCAACAACAACAAAGTTAAGCCAGCTGATTCCAAACTTCCAATTCTTGTAGCAAAGAGTATCAACGAGTCTATTGGAAGAAAATAA

Coding sequence (CDS)

ATGCGTTGCTTCAGGCTTCCTAACAATGTGTGTGAGGACATTAACCAGATTTGCACTAAGTTTTGGTGGGGCTCGATGGGAGATAAAAAGAAGATGCATTGGATGAGTTGGAAGAACCTCTGCAGAAGCAAGGATATCAAGGGGTTGGGATTCAGGGAGCTTAGGACATTCAACCAAGCTATGCTAGCTAAGTTTAGTTGGTGCATCCTTAGAAATTCGAACAACCTCCTAGCTAAGACATTAAAAGGGAGATGGAAAGTAGACAATGGTAGATACATCGAGCTTGCCAAGGATCCGTGGATCAACAGAGAAGGGAGTAGCAAGCCACTCGTAGTTTCAGAGAATCTCAAAGGCCTAAAAGTCAAATGCTTGATTGATGAAAATAACAGATGGATAGTCTCCAAGATAAAAGAAAGTTTTCTACAGGAAGATGTGGATGAGATTTTGAACATTCCTTTAGGAGTGGCCACGTCTAAAGATGAGATTGTTTGGAAGTCAAGATGGAGTAGCATGGATTATTGGGAATGGCTTACCAACAACCCAGATGCAGAGGAATTGGAGAAGGCTATCCTAACGATGTGGAATATTTTGCAGTTCAAGAATCAAATTCTCAACAACAACAAAGTTAAGCCAGCTGATTCCAAACTTCCAATTCTTGTAGCAAAGAGTATCAACGAGTCTATTGGAAGAAAATAA

Protein sequence

MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQAMLAKFSWCILRNSNNLLAKTLKGRWKVDNGRYIELAKDPWINREGSSKPLVVSENLKGLKVKCLIDENNRWIVSKIKESFLQEDVDEILNIPLGVATSKDEIVWKSRWSSMDYWEWLTNNPDAEELEKAILTMWNILQFKNQILNNNKVKPADSKLPILVAKSINESIGRK
Homology
BLAST of Lag0035757 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])

HSP 1 Score: 161.8 bits (408), Expect = 7.2e-36
Identity = 77/199 (38.69%), Postives = 111/199 (55.78%), Query Frame = 0

Query: 1   MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
           + CF+LP ++C +++QI  +FWWGS  + +K+HW SWK LC  KD+ G+GFR++  FNQA
Sbjct: 470 LSCFKLPVSICNELHQIYNRFWWGSSSEDRKIHWQSWKLLCIRKDLGGMGFRDISIFNQA 529

Query: 61  MLAKFSWCILRNSNNLLAKTLKG-----------------------------------RW 120
           MLAK SW ILR+ ++LLAKTL+G                                   RW
Sbjct: 530 MLAKQSWRILRHPDSLLAKTLRGKYFKTGSFLQAKLGARPSYAWRSILWGRDLFKKGYRW 589

Query: 121 KVDNGRYIELAKDPWINREGSSKPLVVSENLKGLKVKCLIDENNRWIVSKIKESFLQEDV 165
           KV NG  I L+ DPW+ R+G+  P+    +++   V  L++   RW   K++ESF+  + 
Sbjct: 590 KVGNGFSINLSSDPWLPRDGNFSPVFTHIHVRNFSVAWLMEGRGRWDEIKVRESFIVSEA 649

BLAST of Lag0035757 vs. NCBI nr
Match: XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia])

HSP 1 Score: 138.7 bits (348), Expect = 6.5e-29
Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 0

Query: 1   MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
           M  FRLP   CE+++Q+  +FWWGS  D KK+HWMSW+ +C  K++ GL FR+L  FNQA
Sbjct: 30  MSVFRLPKGFCEEVSQMFARFWWGSSNDTKKLHWMSWERMCLPKELGGLNFRDLEGFNQA 89

Query: 61  MLAKFSWCILRNSNNLLAKTLKGR-------------------WK--------------- 120
           ++AK  W +L+N N L+++ LK +                   WK               
Sbjct: 90  LVAKQVWRVLQNPNILVSRVLKAKYFHDSLVLQATHLRNQSYFWKGFIWGRDLLIKGLRS 149

Query: 121 -VDNGRYIELAKDPWINREGSSKPLVVSENLKGLKVKCLIDENNRWIVSKIKESFLQEDV 165
            V NG  I +  DPWI R  S +P+        +KV  LI+ N +W V  I   F +ED 
Sbjct: 150 RVGNGSTINIFSDPWIPRPYSFRPITAPFGPYDVKVADLINPNGQWDVHLISYIFCEEDR 209

BLAST of Lag0035757 vs. NCBI nr
Match: XP_023880941.1 (uncharacterized protein LOC111993328 [Quercus suber])

HSP 1 Score: 138.7 bits (348), Expect = 6.5e-29
Identity = 81/274 (29.56%), Postives = 123/274 (44.89%), Query Frame = 0

Query: 1   MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
           M CF LP+++C+D+N + + FWWG    ++K+ W++W+ LC  K+  GLGFR+LR FN A
Sbjct: 255 MSCFLLPDSLCKDLNSMMSNFWWGQKNKERKLVWVAWEKLCTPKEEGGLGFRDLRAFNLA 314

Query: 61  MLAKFSWCILRNSNNLLAKTLK-----------------------------------GRW 120
           +LAK  W I +N+N+L  K LK                                    RW
Sbjct: 315 LLAKQGWRIQQNTNSLAHKVLKAKYFADRTFKEAQLGRRPSYIWRSIMAAKEIVEMGSRW 374

Query: 121 KVDNGRYIELAKDPWINREGSSKPLVVSENLKGLKVKCLID-ENNRWIVSKIKESFLQED 180
            + NG ++++ KD WI    S K +    +L   KV CL+D     W V K++ SFL  +
Sbjct: 375 LIGNGEHVDIWKDRWIPTPDSFKLVSPKVHLDSDKVACLLDASTGSWDVDKVRHSFLPYE 434

Query: 181 VDEILNIPLGVATSKDEIVW---------------------KSRWSSMD-----YWEWLT 213
            + IL I +      D ++W                     K R + M       WE   
Sbjct: 435 AEAILGISISPRRLNDSLIWARTKNGKFSVKSAYKVAQKWLKGRSTKMQEFIEVVWEIKE 494

BLAST of Lag0035757 vs. NCBI nr
Match: XP_030486817.1 (uncharacterized protein LOC115703723 [Cannabis sativa])

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-28
Identity = 72/208 (34.62%), Postives = 103/208 (49.52%), Query Frame = 0

Query: 1   MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
           M CFRLP  +C++I  +  +FWWGS GD +K+HW +W++LCRSK + GLGFR L  FNQA
Sbjct: 684 MACFRLPVKLCKEIEGVMARFWWGSSGDSRKIHWRNWQSLCRSKFVGGLGFRSLIHFNQA 743

Query: 61  MLAKFSWCILRNSNNLLAKTLKGR-----------------------------------W 120
           MLAK +W I    ++LL+ TLK R                                   W
Sbjct: 744 MLAKQAWRIFTQPDSLLSLTLKARYFPNSFILDAKVGHNPSFCWRSILWGRDLLASGLVW 803

Query: 121 KVDNGRYIELAKDPWINREGSSKPLVVSENLKGLKVKCLIDENNRWIVSKIKESFLQEDV 174
           KV NG  I+  KD WI      + L   ++ +  K+   ID    W + +++  F    +
Sbjct: 804 KVGNGETIDTLKDHWIPNSRYKQTLCDLDHQQS-KLSYFIDPLGSWNMDRLRSCFDDATI 863

BLAST of Lag0035757 vs. NCBI nr
Match: XP_024033483.1 (uncharacterized protein LOC112095606 [Citrus clementina])

HSP 1 Score: 134.8 bits (338), Expect = 9.4e-28
Identity = 64/173 (36.99%), Postives = 101/173 (58.38%), Query Frame = 0

Query: 1   MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
           M  F++P  VC DI +    FWWGS  DK+ +HW  W+ L ++K    +GFR+  +FNQA
Sbjct: 209 MSVFKIPMGVCNDIQKTVANFWWGSKSDKRSIHWSKWEKLSQAKCKGRMGFRDFSSFNQA 268

Query: 61  MLAKFSWCILRNSNNLLAKTLKGR---------WKVDNGRYIELAKDPWINREGSSKPLV 120
           ++AK  W IL+  ++L+AK L+ R         W++ +G+ I++ KD WI +  + KP+V
Sbjct: 269 LVAKQGWRILQFPDSLVAKVLQARFSVLVHTIIWRIGDGQKIQIHKDNWIPKPSTFKPIV 328

Query: 121 VSENLKGLKVKCLIDENNRWIVSKIKESFLQEDVDEILNIPLGVATSKDEIVW 165
                +   V  LI+E N+W  S+I   F + D D+I+ IPL  +  +D I+W
Sbjct: 329 RPSLPEDTLVAELINEENQWDESQIYRHFNRMDADKIVEIPLPRSPKEDTIIW 381

BLAST of Lag0035757 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16
Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 0

Query: 1  MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSK-DIKGLGFRELRTFNQ 60
          M CFRL   +C+ +    T+FWW S  +K+K+ W++W+ LC+SK D  GLGFR+L  FNQ
Sbjct: 8  MSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQ 67

Query: 61 AMLAKFSWCILRNSNNLLAKTLKGRW 86
          A+LAK S+ I+   + LL++ L+ R+
Sbjct: 68 ALLAKQSFRIIHQPHTLLSRLLRSRY 93

BLAST of Lag0035757 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.4e-11
Identity = 32/106 (30.19%), Postives = 55/106 (51.89%), Query Frame = 0

Query: 1   MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
           M    LP ++   ++Q+   F WGS  +KKK H + W  +C  K   GLG R  ++ N+A
Sbjct: 53  MSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRA 112

Query: 61  MLAKFSWCILRNSNNLLAKTLKGRWKVDNGRYIELAKDPWINREGS 107
           +++K  W +L+  N+L    L+ ++ V      E+    W+  +GS
Sbjct: 113 LISKVGWRLLQEKNSLWTLVLQKKYHVG-----EIRDSRWLIPKGS 153

BLAST of Lag0035757 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.5e-36
Identity = 77/199 (38.69%), Postives = 111/199 (55.78%), Query Frame = 0

Query: 1   MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
           + CF+LP ++C +++QI  +FWWGS  + +K+HW SWK LC  KD+ G+GFR++  FNQA
Sbjct: 470 LSCFKLPVSICNELHQIYNRFWWGSSSEDRKIHWQSWKLLCIRKDLGGMGFRDISIFNQA 529

Query: 61  MLAKFSWCILRNSNNLLAKTLKG-----------------------------------RW 120
           MLAK SW ILR+ ++LLAKTL+G                                   RW
Sbjct: 530 MLAKQSWRILRHPDSLLAKTLRGKYFKTGSFLQAKLGARPSYAWRSILWGRDLFKKGYRW 589

Query: 121 KVDNGRYIELAKDPWINREGSSKPLVVSENLKGLKVKCLIDENNRWIVSKIKESFLQEDV 165
           KV NG  I L+ DPW+ R+G+  P+    +++   V  L++   RW   K++ESF+  + 
Sbjct: 590 KVGNGFSINLSSDPWLPRDGNFSPVFTHIHVRNFSVAWLMEGRGRWDEIKVRESFIVSEA 649

BLAST of Lag0035757 vs. ExPASy TrEMBL
Match: A0A6J1BRN0 (uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004787 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.2e-29
Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 0

Query: 1   MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
           M  FRLP   CE+++Q+  +FWWGS  D KK+HWMSW+ +C  K++ GL FR+L  FNQA
Sbjct: 30  MSVFRLPKGFCEEVSQMFARFWWGSSNDTKKLHWMSWERMCLPKELGGLNFRDLEGFNQA 89

Query: 61  MLAKFSWCILRNSNNLLAKTLKGR-------------------WK--------------- 120
           ++AK  W +L+N N L+++ LK +                   WK               
Sbjct: 90  LVAKQVWRVLQNPNILVSRVLKAKYFHDSLVLQATHLRNQSYFWKGFIWGRDLLIKGLRS 149

Query: 121 -VDNGRYIELAKDPWINREGSSKPLVVSENLKGLKVKCLIDENNRWIVSKIKESFLQEDV 165
            V NG  I +  DPWI R  S +P+        +KV  LI+ N +W V  I   F +ED 
Sbjct: 150 RVGNGSTINIFSDPWIPRPYSFRPITAPFGPYDVKVADLINPNGQWDVHLISYIFCEEDR 209

BLAST of Lag0035757 vs. ExPASy TrEMBL
Match: A0A2N9EWI8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6846 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 5.4e-29
Identity = 67/174 (38.51%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 1    MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
            M CF+LP  +C++I+ + T+FWWG  G+++K+HW+S K LC++K   G+GFR+L+ FNQA
Sbjct: 1258 MSCFKLPAGLCDEISNMATRFWWGQKGNERKIHWLSKKKLCQAKMEGGMGFRDLQCFNQA 1317

Query: 61   MLAKFSWCILRNSNNLL-----AKTLKG---RWKVDNGRYIELAKDPWINREGSSKPLVV 120
            +LA+  W +L+N N+L+     AK + G   RW+V NG  I + KD WI+   + + +  
Sbjct: 1318 LLARQGWRLLQNPNSLVFRVCGAKKVLGDGVRWRVGNGENIRIWKDKWIDSPSTYRVISP 1377

Query: 121  SENL-KGLKVKCLIDENN-RWIVSKIKESFLQEDVDEILNIPLGVATSKDEIVW 165
             + L +   V  LI+++   W V  + E FL  D++ I+ IPL +    D +VW
Sbjct: 1378 VQYLEENASVTSLINQDTMNWNVPLLHEIFLPRDIEMIIKIPLSMRRPCDRVVW 1431

BLAST of Lag0035757 vs. ExPASy TrEMBL
Match: A0A2N9F0P5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8333 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.7e-28
Identity = 62/171 (36.26%), Postives = 104/171 (60.82%), Query Frame = 0

Query: 1    MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
            M CF+LP+++C ++N + + FWWG       +HWM W+ LC SK+  GLGFR+L+TFN A
Sbjct: 1030 MSCFKLPDSLCNELNSMASNFWWGHKATGHNVHWMKWEKLCVSKEAGGLGFRDLKTFNLA 1089

Query: 61   MLAKFSWCILRNSNNLLAKTLK--GRWKVDNGRYIELAKDPWINREGSSKPLVVSENLKG 120
            +LAK  W IL+   +L+A+ L+   RW + +G+ +E+ +DPW+  +GS    +V  + +G
Sbjct: 1090 LLAKQGWRILQQPQSLVARVLQLGVRWHIGDGKSVEIWRDPWLPTKGS---FMVHSDPQG 1149

Query: 121  LKV-----KCLIDENNRWIVSKIKESFLQEDVDEILNIPLGVATSKDEIVW 165
              +       +++++ RW V  IKE F + + + I++IPL      D + W
Sbjct: 1150 SHLVERVSDLILEDSQRWNVELIKEVFSEWEANVIVSIPLPPRQRVDRLFW 1197

BLAST of Lag0035757 vs. ExPASy TrEMBL
Match: A0A803Q8H5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.5e-28
Identity = 69/179 (38.55%), Postives = 96/179 (53.63%), Query Frame = 0

Query: 1    MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
            M CFRLP +VC+ I ++  +FWWGSMG   K+HW +W NLC SK   GLGFR L   NQA
Sbjct: 1273 MSCFRLPVSVCQKIEKMMAQFWWGSMGKGSKIHWKAWTNLCTSKFFGGLGFRSLVHHNQA 1332

Query: 61   MLAKFSWCILRNSNNLLAKTLKGR--------WKVDNGRYIELAKDPWINREGSSKPLVV 120
            M+AK +W +L N N+LLA  LK +        WKV NG  I   ++ W+      K + +
Sbjct: 1333 MIAKQAWRVLSNPNSLLAAILKAKDLLNQGLMWKVGNGCSIRTLENYWVPDSRFLKFIAI 1392

Query: 121  SENLKGLKVKCLIDENNRWIVSKIKESFLQEDVDEILNIPLGVATSKDEIVWKSRWSSM 172
                   +V   IDEN     +K+ + F    V  IL +P+G    +D ++W    + M
Sbjct: 1393 DPPPSD-RVSFFIDENGHCNRAKLDQYFDSHTVSSILKVPIGGLNKEDHLIWNKDTTGM 1450

BLAST of Lag0035757 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-17
Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 0

Query: 1  MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSK-DIKGLGFRELRTFNQ 60
          M CFRL   +C+ +    T+FWW S  +K+K+ W++W+ LC+SK D  GLGFR+L  FNQ
Sbjct: 8  MSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQ 67

Query: 61 AMLAKFSWCILRNSNNLLAKTLKGRW 86
          A+LAK S+ I+   + LL++ L+ R+
Sbjct: 68 ALLAKQSFRIIHQPHTLLSRLLRSRY 93

BLAST of Lag0035757 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 9.8e-15
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 0

Query: 1  MRCFRLPNNVCEDINQICTKFWWGSMGDKKKMHWMSWKNLCRSKDIKGLGFRELRTFNQA 60
          M CF LP  VC+ I  +   FWW +  + K MHW +W +L   K   G+GF+++  FN A
Sbjct: 8  MACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLA 67

Query: 61 MLAKFSWCILRNSNNLLAKTLKGRW 86
          +L K  W +L    +L+AK  K R+
Sbjct: 68 LLGKQMWRMLSRPESLMAKVFKSRY 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155286.17.2e-3638.69uncharacterized protein LOC111022423 [Momordica charantia][more]
XP_022131662.16.5e-2936.18uncharacterized protein LOC111004787 [Momordica charantia][more]
XP_023880941.16.5e-2929.56uncharacterized protein LOC111993328 [Quercus suber][more]
XP_030486817.11.5e-2834.62uncharacterized protein LOC115703723 [Cannabis sativa][more]
XP_024033483.19.4e-2836.99uncharacterized protein LOC112095606 [Citrus clementina][more]
Match NameE-valueIdentityDescription
P932952.3e-1645.35Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
P0C2F66.4e-1130.19Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A6J1DRA03.5e-3638.69uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1BRN03.2e-2936.18uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A2N9EWI85.4e-2938.51Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6846 PE=4 SV=1[more]
A0A2N9F0P52.7e-2836.26Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8333 PE=4 SV=1[more]
A0A803Q8H53.5e-2838.55Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00310.11.6e-1745.35RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.19.8e-1538.82Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 1..180
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035757.1Lag0035757.1mRNA