Homology
BLAST of Lag0035607 vs. NCBI nr
Match:
RVW73393.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 263.5 bits (672), Expect = 3.6e-66
Identity = 145/355 (40.85%), Postives = 214/355 (60.28%), Query Frame = 0
Query: 11 GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSM 70
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 71 DVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTTLI 130
VA V E T LM+AL+ YEKPS NNKV+L+KKLFN++M+E+ASV ++NE T+
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 131 NQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQ 190
NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 191 GSNKESTVGPALVMT---KGHFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYN 250
+ + S G AL + +GHFK QC +K ED V++ +L V+S
Sbjct: 190 DAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDSANAVTEEVQDALLLAVDSPL--- 249
Query: 251 NHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL 310
DW+LDS AS H R + ++ G G V + +G G+GDV + G
Sbjct: 250 ---DDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVW 309
Query: 311 VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI 359
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Sbjct: 310 LLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYM 358
BLAST of Lag0035607 vs. NCBI nr
Match:
RVW17810.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 263.5 bits (672), Expect = 3.6e-66
Identity = 145/355 (40.85%), Postives = 214/355 (60.28%), Query Frame = 0
Query: 11 GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSM 70
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 71 DVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTTLI 130
VA V E T LM+AL+ YEKPS NNKV+L+KKLFN++M+E+ASV ++NE T+
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 131 NQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQ 190
NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 191 GSNKESTVGPALVMT---KGHFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYN 250
+ + S G AL + +GHFK QC +K ED V++ +L V+S
Sbjct: 190 DAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDSANAVTEEVQDALLLAVDSPL--- 249
Query: 251 NHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL 310
DW+LDS AS H R + ++ G G V + +G G+GDV + G
Sbjct: 250 ---DDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVW 309
Query: 311 VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI 359
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Sbjct: 310 LLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYM 358
BLAST of Lag0035607 vs. NCBI nr
Match:
RVW62119.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 262.7 bits (670), Expect = 6.1e-66
Identity = 145/355 (40.85%), Postives = 213/355 (60.00%), Query Frame = 0
Query: 11 GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSM 70
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 71 DVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTTLI 130
VA V E T LM+AL+ YEKPS NNKV+L+KKLFN++M+E+ASV ++NE T+
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 131 NQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQ 190
NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 191 GSNKESTVGPALVMT---KGHFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYN 250
+ + S G AL + +GHFK QC +K ED V + +L V+S
Sbjct: 190 DAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDSANAVTEEVHDALLLAVDSPL--- 249
Query: 251 NHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL 310
DW+LDS AS H R + ++ G G V + +G G+GDV + G
Sbjct: 250 ---DDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVW 309
Query: 311 VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI 359
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Sbjct: 310 LLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYM 358
BLAST of Lag0035607 vs. NCBI nr
Match:
CAN74198.1 (hypothetical protein VITISV_005765 [Vitis vinifera])
HSP 1 Score: 262.3 bits (669), Expect = 8.0e-66
Identity = 144/355 (40.56%), Postives = 213/355 (60.00%), Query Frame = 0
Query: 11 GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSM 70
G+ KFDG +F YW++Q++D L +K+H L +P+ M E+W LD + + IR+ LS
Sbjct: 10 GIEKFDGTDFAYWRIQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 71 DVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTTLI 130
VA V E T LM+ L+ YEKPS NNKV+L+KKLFN++M+E+ASV ++NE T+
Sbjct: 70 SVAHNVVKEKTTTDLMKVLSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 131 NQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQ 190
NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIQDLILAEEIRRR 189
Query: 191 GSNKESTVGPALVMT---KGHFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYN 250
+ + S G AL + +GHFK QC +K ED V++ +L V+S
Sbjct: 190 DAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDSANXVTEEVQDALLLAVDSPL--- 249
Query: 251 NHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL 310
DW+LDS AS H R + ++ G G V + +G G+GDV + G
Sbjct: 250 ---DDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVW 309
Query: 311 VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI 359
+L VRY+P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Sbjct: 310 LLEKVRYIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTDTLYM 358
BLAST of Lag0035607 vs. NCBI nr
Match:
TKS02608.1 (hypothetical protein D5086_0000161380 [Populus alba])
HSP 1 Score: 261.5 bits (667), Expect = 1.4e-65
Identity = 155/408 (37.99%), Postives = 225/408 (55.15%), Query Frame = 0
Query: 11 GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSM 70
G+ KFDG +FGYWKMQ++D L KK+H L +P++M E+W+ LD + + IR+ LS
Sbjct: 9 GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGSKPEKMEAEEWQLLDRQVLGIIRLSLSR 68
Query: 71 DVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTTLI 130
VA V E + KLMEAL+ YEKPS NNKV+L+KKLFN++M E+ SV ++N T+
Sbjct: 69 RVAHNVTKEKSTAKLMEALSGMYEKPSANNKVHLMKKLFNLKMVENTSVTQHLNNFNTIT 128
Query: 131 NQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQ 190
NQL SV+IEF DE+ + LL LP SWE M+TAVSNS G + LK+ ++ DL +AEE+RR+
Sbjct: 129 NQLSSVEIEFDDEIRALILLASLPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRK 188
Query: 191 GSNKESTVGPALVMT--------------------------------------KGHFKYQ 250
S + S+ G AL + GHF
Sbjct: 189 DSGESSSSGSALNINTRGRRHDRGSSRGRSKSRYRSKSKFGSRKQVECWNCGKPGHFSRN 248
Query: 251 CRKFKEDQKRKPEANI--VEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSF 310
C K K+ + A V++ ++ V+S +WILDS AS H + ++
Sbjct: 249 CTKPKKPEADSANATTDEVQDALILVVQSQI------DEWILDSGASFHCTPHNEMLQNY 308
Query: 311 TGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGY 370
GG HG+V + +G K GIGDV +KT G L++VR+VP +K LIS+G+L D G+
Sbjct: 309 VGGDHGVVYLADGTPLKIVGIGDVQIKTMNGSIWTLQNVRHVPELKKKLISVGQLDDSGH 368
Query: 371 MCEFGSRQCKLKFRSQVVAVGHTKSTLYIC--QLNVAKGSKKQWMSVK 376
F K+ + V+A G TL +L V++ ++ +W ++K
Sbjct: 369 SILFAGGMWKVSKGAMVLARGKKTGTLKFSDPELQVSR-NEDEWANIK 409
BLAST of Lag0035607 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 171.4 bits (433), Expect = 2.4e-41
Identity = 131/410 (31.95%), Postives = 200/410 (48.78%), Query Frame = 0
Query: 12 VMKFDGKN-FGYWKMQVKDCLSCKKVHKSL---KERPKEMSDEDWEALDEEAIATIRMCL 71
V KF+G N F W+ +++D L + +HK L ++P M EDW LDE A + IR+ L
Sbjct: 8 VAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHL 67
Query: 72 SMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTT 131
S DV + + E TA + L + Y + NK+YL K+L+ + MSE + ++N
Sbjct: 68 SDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNG 127
Query: 132 LINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCD-LAIAEEI 191
LI QL ++ ++ +E I LL LP S++ + T + + G T++ +V L + E++
Sbjct: 128 LITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILH--GKTTIELKDVTSALLLNEKM 187
Query: 192 RRQGSNKESTVGPALVM--------------------------------------TKGHF 251
R++ N+ G AL+ GHF
Sbjct: 188 RKKPENQ----GQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHF 247
Query: 252 KYQC---RKFK-EDQKRKPEANIV------EEVVLACVESD--TKYNNHSSDWILDSAAS 311
K C RK K E +K + N + VVL E + + S+W++D+AAS
Sbjct: 248 KRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAAS 307
Query: 312 VHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKM 367
H R LF + G G V+MGN SK GIGD+ +KT G LVL+DVR+VP+++M
Sbjct: 308 HHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRM 367
BLAST of Lag0035607 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 55.8 bits (133), Expect = 1.5e-06
Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 0
Query: 246 SSDWILDSAASVHIASD---RSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGK 305
S++W+LDS A+ HI SD SL +TGG V + +G T G SL T+
Sbjct: 328 SNNWLLDSGATHHITSDFNNLSLHQPYTGGDD--VMVADGSTIPISHTGSTSLSTK-SRP 387
Query: 306 LVLRDVRYVPNIKMNLISIGKLAD-DGYMCEFGSRQCKLKFRSQVVAV--GHTKSTLY 358
L L ++ YVPNI NLIS+ +L + +G EF ++K + V + G TK LY
Sbjct: 388 LNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELY 442
BLAST of Lag0035607 vs. ExPASy Swiss-Prot
Match:
P25601 (Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5B PE=5 SV=1)
HSP 1 Score: 55.1 bits (131), Expect = 2.6e-06
Identity = 32/87 (36.78%), Postives = 47/87 (54.02%), Query Frame = 0
Query: 235 CVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVS 294
C+ S T SS+WI D+ + H+ DRS+F+SFT G G + G G V+
Sbjct: 65 CMLSSTVPATKSSEWIFDTGCTSHMCHDRSIFSSFTRSSRKDFVRGVGGSIPIMGSGTVN 124
Query: 295 LKTECGGKLVLRDVRYVPNIKMNLISI 322
+ G + L DV YVP++ +NLIS+
Sbjct: 125 I-----GTVQLHDVSYVPDLPVNLISV 146
BLAST of Lag0035607 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 50.1 bits (118), Expect = 8.2e-05
Identity = 42/119 (35.29%), Postives = 59/119 (49.58%), Query Frame = 0
Query: 245 HSSDWILDSAASVHIASD---RSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGG 304
++++W+LDS A+ HI SD S +TGG V + +G T G SL T
Sbjct: 306 NANNWLLDSGATHHITSDFNNLSFHQPYTGGDD--VMIADGSTIPITHTGSASLPTS-SR 365
Query: 305 KLVLRDVRYVPNIKMNLISIGKLADDGYM-CEFGSRQCKLKFRSQVVAV--GHTKSTLY 358
L L V YVPNI NLIS+ +L + + EF ++K + V + G TK LY
Sbjct: 366 SLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELY 421
BLAST of Lag0035607 vs. ExPASy TrEMBL
Match:
A0A2N9GZ72 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35439 PE=4 SV=1)
HSP 1 Score: 266.5 bits (680), Expect = 2.1e-67
Identity = 155/385 (40.26%), Postives = 235/385 (61.04%), Query Frame = 0
Query: 11 GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSM 70
G+ KFDG +FGYWKMQ++D L KK+H L ++P +M D +W LD + + IR+ LS
Sbjct: 10 GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGKKPNKMEDAEWALLDRQVLGVIRLTLSR 69
Query: 71 DVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTTLI 130
+A V ETT V LM AL+ YEKPS NNKV+L+KKLFN++M+E A+V ++NE T+
Sbjct: 70 SIAHNVVKETTTVGLMTALSGMYEKPSANNKVHLMKKLFNLKMAEGAAVAKHLNEFNTIT 129
Query: 131 NQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQ 190
NQL SV+IEF DE+ + +L LP+SWE M+ AVSNS G LK+ ++ DL ++EE+RR+
Sbjct: 130 NQLSSVEIEFDDEIRALIVLASLPNSWEAMRMAVSNSAGKGKLKYDDIRDLILSEEVRRR 189
Query: 191 GSNKESTVGPALVMTKGHFKYQCRKFKEDQKRKPEANIVEE--VVLACVESDTKY-NNHS 250
+ ++ G A V + + + K D ++ A + +E VVL+ E ++ +N
Sbjct: 190 DACIDNAEGQAFVT-----ENRDKDHKHDDEKGTTAVVDDEEVVVLSVQEQKCEHVDNID 249
Query: 251 SDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLR 310
+W++DSAA+ H+ + LFT++ G G V+MGN SK GIGDV +KT G ++L+
Sbjct: 250 DEWVVDSAATHHVVRTKELFTTYKAGDFGTVKMGNTSYSKIVGIGDVCIKTNVGFTVMLK 309
Query: 311 DVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYICQLNVAKG 370
+VR+VP++ NLIS + GY G+ + KL VVA G LY+ ++ K
Sbjct: 310 NVRHVPDLCFNLISTPVMDRAGYCNHLGNGRWKLAKGPMVVARGRIGCGLYMTRV---KA 369
Query: 371 SKKQWMSVKAADGSCRGTVQPAARI 392
KK++ +V G+ + T+Q +
Sbjct: 370 CKKKFNAV----GTIKKTLQSRVNV 382
BLAST of Lag0035607 vs. ExPASy TrEMBL
Match:
A0A438GME7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3541 PE=4 SV=1)
HSP 1 Score: 263.5 bits (672), Expect = 1.7e-66
Identity = 145/355 (40.85%), Postives = 214/355 (60.28%), Query Frame = 0
Query: 11 GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSM 70
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 71 DVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTTLI 130
VA V E T LM+AL+ YEKPS NNKV+L+KKLFN++M+E+ASV ++NE T+
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 131 NQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQ 190
NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 191 GSNKESTVGPALVMT---KGHFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYN 250
+ + S G AL + +GHFK QC +K ED V++ +L V+S
Sbjct: 190 DAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDSANAVTEEVQDALLLAVDSPL--- 249
Query: 251 NHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL 310
DW+LDS AS H R + ++ G G V + +G G+GDV + G
Sbjct: 250 ---DDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVW 309
Query: 311 VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI 359
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Sbjct: 310 LLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYM 358
BLAST of Lag0035607 vs. ExPASy TrEMBL
Match:
A0A438C3I2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2500 PE=4 SV=1)
HSP 1 Score: 263.5 bits (672), Expect = 1.7e-66
Identity = 145/355 (40.85%), Postives = 214/355 (60.28%), Query Frame = 0
Query: 11 GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSM 70
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 71 DVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTTLI 130
VA V E T LM+AL+ YEKPS NNKV+L+KKLFN++M+E+ASV ++NE T+
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 131 NQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQ 190
NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 191 GSNKESTVGPALVMT---KGHFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYN 250
+ + S G AL + +GHFK QC +K ED V++ +L V+S
Sbjct: 190 DAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDSANAVTEEVQDALLLAVDSPL--- 249
Query: 251 NHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL 310
DW+LDS AS H R + ++ G G V + +G G+GDV + G
Sbjct: 250 ---DDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVW 309
Query: 311 VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI 359
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Sbjct: 310 LLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYM 358
BLAST of Lag0035607 vs. ExPASy TrEMBL
Match:
A0A438FQ91 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3625 PE=4 SV=1)
HSP 1 Score: 262.7 bits (670), Expect = 3.0e-66
Identity = 145/355 (40.85%), Postives = 213/355 (60.00%), Query Frame = 0
Query: 11 GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSM 70
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS
Sbjct: 10 GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 71 DVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTTLI 130
VA V E T LM+AL+ YEKPS NNKV+L+KKLFN++M+E+ASV ++NE T+
Sbjct: 70 SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 131 NQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQ 190
NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189
Query: 191 GSNKESTVGPALVMT---KGHFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYN 250
+ + S G AL + +GHFK QC +K ED V + +L V+S
Sbjct: 190 DAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDSANAVTEEVHDALLLAVDSPL--- 249
Query: 251 NHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL 310
DW+LDS AS H R + ++ G G V + +G G+GDV + G
Sbjct: 250 ---DDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVW 309
Query: 311 VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI 359
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Sbjct: 310 LLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYM 358
BLAST of Lag0035607 vs. ExPASy TrEMBL
Match:
A5B5N4 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_005765 PE=4 SV=1)
HSP 1 Score: 262.3 bits (669), Expect = 3.9e-66
Identity = 144/355 (40.56%), Postives = 213/355 (60.00%), Query Frame = 0
Query: 11 GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSM 70
G+ KFDG +F YW++Q++D L +K+H L +P+ M E+W LD + + IR+ LS
Sbjct: 10 GIEKFDGTDFAYWRIQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69
Query: 71 DVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFNMQMSEDASVNFYINEVTTLI 130
VA V E T LM+ L+ YEKPS NNKV+L+KKLFN++M+E+ASV ++NE T+
Sbjct: 70 SVAHNVVKEKTTTDLMKVLSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129
Query: 131 NQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQ 190
NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIQDLILAEEIRRR 189
Query: 191 GSNKESTVGPALVMT---KGHFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYN 250
+ + S G AL + +GHFK QC +K ED V++ +L V+S
Sbjct: 190 DAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDSANXVTEEVQDALLLAVDSPL--- 249
Query: 251 NHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL 310
DW+LDS AS H R + ++ G G V + +G G+GDV + G
Sbjct: 250 ---DDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVW 309
Query: 311 VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI 359
+L VRY+P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Sbjct: 310 LLEKVRYIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTDTLYM 358
BLAST of Lag0035607 vs. TAIR 10
Match:
AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 65.1 bits (157), Expect = 1.8e-10
Identity = 33/88 (37.50%), Postives = 57/88 (64.77%), Query Frame = 0
Query: 14 KFDGKNFGYWKMQVKDCLSCKKVHKSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVAS 73
K DG ++ + +M+++D L KK+H+ L ++ + MS +DW L + + IR+ +S ++A
Sbjct: 8 KVDGTSYSFCRMKIEDYLYGKKLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAH 67
Query: 74 LVAHETTAVKLMEALTNRYEKPSTNNKV 102
VA E + LM+ L++ Y+KPSTNN V
Sbjct: 68 NVAKEKSPDGLMKVLSDIYKKPSTNNTV 95
BLAST of Lag0035607 vs. TAIR 10
Match:
AT3G20980.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 52.0 bits (123), Expect = 1.5e-06
Identity = 33/109 (30.28%), Postives = 55/109 (50.46%), Query Frame = 0
Query: 226 NIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTS 285
+++ EV E +KY H + W++ S S H+ FT+ V+ +G S
Sbjct: 246 DLLNEVPDHVAECFSKYTFHENIWLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDKS 305
Query: 286 KT-----RGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGY 330
+T GIGDV+ T G K +++V YVP I+ N +S+ +L +G+
Sbjct: 306 ETTVAMVEGIGDVTFITNEGNK-TIKNVLYVPGIEGNALSVSQLKRNGF 353
BLAST of Lag0035607 vs. TAIR 10
Match:
AT3G21000.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 51.2 bits (121), Expect = 2.6e-06
Identity = 64/313 (20.45%), Postives = 128/313 (40.89%), Query Frame = 0
Query: 43 RPKEMSD-EDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKV 102
+P+E+S D+ D +A+ ++ L+ V ++A + + L E+ +
Sbjct: 56 QPEELSKWRDFVVKDAKALQILQSSLTDSVFRKTLSASSAKDVWDLLRKGNEQATIRRLE 115
Query: 103 Y-----LVKKLFNMQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSW 162
L K+L +++M + S + Y+++ ++ +L K+E SD + T L S+
Sbjct: 116 QVTIRRLEKQLEDLKMVDKESGSSYLDKALEILERLGRAKLEKSDYEICKNVFTTLSGSF 175
Query: 163 ETMKTA------VSNSTGNNTLKF---------SEVCDLAIAEEIRRQGSNKESTVGPAL 222
+ + + V T + +++ +E + +++R + S E G L
Sbjct: 176 DGLDSMLEELIDVHKMTSKSLVEYFYYRVHESSTEEAIFGLLKDLRLK-SKSEKWCG--L 235
Query: 223 VMTKGHFKYQCRKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIAS 282
H + C+ K + E IV + L V + WI+ A +++
Sbjct: 236 CYKNNHNQEDCKFRIHTDKEEKEDEIVVDYRLETVPNLGAKTYDDDIWIIHKMAPINMTP 295
Query: 283 DRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISI 335
FT+ V +G G GDV ++ + G K +R+V +VP + N++S
Sbjct: 296 YVKYFTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVIFVPGLNRNVLSF 355
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RVW73393.1 | 3.6e-66 | 40.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
RVW17810.1 | 3.6e-66 | 40.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
RVW62119.1 | 6.1e-66 | 40.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
CAN74198.1 | 8.0e-66 | 40.56 | hypothetical protein VITISV_005765 [Vitis vinifera] | [more] |
TKS02608.1 | 1.4e-65 | 37.99 | hypothetical protein D5086_0000161380 [Populus alba] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 2.4e-41 | 31.95 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q94HW2 | 1.5e-06 | 37.29 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P25601 | 2.6e-06 | 36.78 | Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Q9ZT94 | 8.2e-05 | 35.29 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A2N9GZ72 | 2.1e-67 | 40.26 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35439 PE=4 SV=1 | [more] |
A0A438GME7 | 1.7e-66 | 40.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A438C3I2 | 1.7e-66 | 40.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A438FQ91 | 3.0e-66 | 40.85 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A5B5N4 | 3.9e-66 | 40.56 | Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... | [more] |
Match Name | E-value | Identity | Description | |
AT3G29785.1 | 1.8e-10 | 37.50 | unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact... | [more] |
AT3G20980.1 | 1.5e-06 | 30.28 | Gag-Pol-related retrotransposon family protein | [more] |
AT3G21000.1 | 2.6e-06 | 20.45 | Gag-Pol-related retrotransposon family protein | [more] |