Lag0035605 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTCATAATCTTGAGAAGAGCATCTACATGTCTCAACCAGAAGAGTTCATACAACAAGATCAAGAGCAAAAGGTTTGTGGCTTAATCGATCCATTCATGGATTGATTGAAGCATTTTAATCTTGGAATAGAAGATTTTGATATTGCGATCAAATCTTTTGGCATTTAACGGAACATTGATGAATCTTTTCTCTACAAGAAGATCGTCAATAGTTCAGTAGCTTATTAAGTGTTGTATATGATTGATATCCTAGTCATTGAAAATGATGTAGGTTATCTTACTGACTAGTAAAAGGAGCTAGCAGCTCATTTCCCAATGAAAATTTGGGAGAAGCCGAGTTTGTTCTTGGGATCCAAATTGTTAGGAACCGTAAGAACAAAAAACTAGCCTTGTTTCAAGTGTCTTATATCTACAACATGTTAGTTAGATATAAGATGCAGAATTTTGAGAAATGTTCACTACCTTTCAGACATGGAATTCTTTTGTTTAAGAAACTTATTCCTGAGACACCTCAAGAAGTTGAGGACATGAGACGAATGCCCTATGCAGTAGGGGTTGCAAGTAAGTATCAATCTAATCCAAGATTTTGTCATTGGAAAACTGTTAAGAATACCCTCAAGTATCTTAGGAGAATGAGGAACTATATGCTCGTGTACGGGACTAAGGATTTCATCCTTACAAGATACACTGACACGGATTTTAAGACTGGTAAGGATTTGAGGAAATCTACATCAGCATCTATGGTCAATCTTTACGAAGGAGCTATAGTATGGCATAGTTACAGTCTTGACCATATAGGCCGAAAATATAGTTGCTTGTGAAGCAACGATAGAGACTGTATGACTTAAGAAGTTCTTGATTGATTTGGAATGTGTTACAAATGTGAACTTGCCCATCACACTTTATAGTGATATAGTGGTGTTGTGGCAAATTCAAAAGAACATCACAACCCAAGACAATCAGACACATTAAATTGAATGAAATATTGCTGATTCATTTACAAAGACCCTTTCGGCTAAAGTGTTTGAGGGTCATCTAGAAGGTCTAGATCTACGAGATATGTACAAAGGCGTAATCTAGGGCAAGTGGGAGAAATGTAATGGGTGTAGTTATACCATTATGTAATGGGTATAGGGATGCCCTACACTACAAAAAAATTGTGATTTCATGACACCAAGGGGAAAAGAAATAAAGTTAAGGGAGGGAAAAAATGTCATAAAATGGAAAACACGTTTTTTTGGCGGGAAAAAACGGAAATTTTCGTATTTTCGGAAATTTATGACATTTTTTCACCGTCATAAAATTATGATATTTTTTAAATGTCATTAAATAAAAAATAATTTATTTTCATCTTTAAGTAACTTTTTAATCTTAAAAAAATATTAAAAATTAGGAAAAGACAAAAGTTAAAAGTAAACCCTAGTGTATGTCCTTTCTCCCTCTCCTCTCTTTTTCACGTGTATGTCCATTAGTACACATTTATGTTGAACGCACATTTGGCAAATGTTGGCTTTTTTTACCACTTAATTAAGCTTGTTGCTTTAGTCCTTTAATAGTTGAACTACTAACATGTCTCATAGTGACAACTTAGTGTTACTCAACTAGTGCCTTATAGACCTATTATAATATTCTTTTTTTTTTTTTTTTGAAAAACCCTATTATAATATTCTTGTTGTGTGTTGTTGAACATTTTTTCACTCTTGTTGAAGGTGTCTCAACCAAACATGACCAATGAGATGCACACTTAAAGCTATATTCTTATTTTAAGTATGTCTATTTTAGTCACGATATTATCTCTCTTTTTTCAAGCGATATTTTATCTTTAGACTGGTGCCTGTGTTTTTGGCTACAACATTTTATATGATTTACAACTATACTCTAAGCACACATATGAGTTTATTGAGGCTCCATTTGATAACAATTTTTTATATTACTATTCTTCAAAAGTATGGTTGCAGGTACTATTTCCACCCATGTGCTTTTTTATTATCTAACCAAATTTTATTGAACTGAAGTAGTTGTTGTTTATCTTTTTTTACTTGTGGCATTTTTCATGTTTCTGGATATTTTAGTCTTTCGCTCTAAACAGAAAGCAAAAGGAAGTTGTTGCTATTCAAATTTCACAGTTTTCAATTGATGCAAAATATGACGATGTTGAAGAATTGCCGAGACGAAACTATAAAGTAGAAAACACTTCTGAAGTAATTGAAGTTGCTACACAAAAATGATAACTACCACAACTAAGGTAAGAATTCACTTGTATTTATTTAAATTTTGCACAAATCTTTATTAACACTTGTTCCAATGATTCCAAAATAGGATGGAACTCCTTGTCGGTTGGCATTTGGATCTATTGACAACATTGTCGCATGTGGGACAATATTTGATTCAAGTATAAAAGTTTATAATGTAAAGGTTTCAATTGATGTAGTGGTGGATGGAAATTGTTCTCTTCCCATACCATCGAATGAAGGAGAAAACTTACTCTCCCAAGAGTTAGGTTCGCATCTATTATAG ATGGATGTCATAATCTTGAGAAGAGCATCTACATGTCTCAACCAGAAGAGTTCATACAACAAGATCAAGAGCAAAAGACATGGAATTCTTTTGTTTAAGAAACTTATTCCTGAGACACCTCAAGAAGTTGAGGACATGAGACGAATGCCCTATGCAGTAGGGGTTGCAAGTAAGTATCAATCTAATCCAAGATTTTGTCATTGGAAAACTGTTAAGAATACCCTCAAGTATCTTAGGAGAATGAGGAACTATATGCTCGTGTACGGGACTAAGGATTTCATCCTTACAAGATACACTGACACGGATTTTAAGACTGGTAAGGATTTGAGGAAATCTACATCAGCATCTATGGTCAATCTTTACGAAGGAGCTATATCTTTCGCTCTAAACAGAAAGCAAAAGGAAGTTGTTGCTATTCAAATTTCACAGTTTTCAATTGATGCAAAATATGACGATGTTGAAGAATTGCCGAGACGAAACTATAAAGTAGAAAACACTTCTGAAGATGGAACTCCTTGTCGGTTGGCATTTGGATCTATTGACAACATTGTCGCATGTGGGACAATATTTGATTCAAGTATAAAAGTTTATAATGTAAAGGTTTCAATTGATGTAGTGGTGGATGGAAATTGTTCTCTTCCCATACCATCGAATGAAGGAGAAAACTTACTCTCCCAAGAGTTAGGTTCGCATCTATTATAG ATGGATGTCATAATCTTGAGAAGAGCATCTACATGTCTCAACCAGAAGAGTTCATACAACAAGATCAAGAGCAAAAGACATGGAATTCTTTTGTTTAAGAAACTTATTCCTGAGACACCTCAAGAAGTTGAGGACATGAGACGAATGCCCTATGCAGTAGGGGTTGCAAGTAAGTATCAATCTAATCCAAGATTTTGTCATTGGAAAACTGTTAAGAATACCCTCAAGTATCTTAGGAGAATGAGGAACTATATGCTCGTGTACGGGACTAAGGATTTCATCCTTACAAGATACACTGACACGGATTTTAAGACTGGTAAGGATTTGAGGAAATCTACATCAGCATCTATGGTCAATCTTTACGAAGGAGCTATATCTTTCGCTCTAAACAGAAAGCAAAAGGAAGTTGTTGCTATTCAAATTTCACAGTTTTCAATTGATGCAAAATATGACGATGTTGAAGAATTGCCGAGACGAAACTATAAAGTAGAAAACACTTCTGAAGATGGAACTCCTTGTCGGTTGGCATTTGGATCTATTGACAACATTGTCGCATGTGGGACAATATTTGATTCAAGTATAAAAGTTTATAATGTAAAGGTTTCAATTGATGTAGTGGTGGATGGAAATTGTTCTCTTCCCATACCATCGAATGAAGGAGAAAACTTACTCTCCCAAGAGTTAGGTTCGCATCTATTATAG MDVIILRRASTCLNQKSSYNKIKSKRHGILLFKKLIPETPQEVEDMRRMPYAVGVASKYQSNPRFCHWKTVKNTLKYLRRMRNYMLVYGTKDFILTRYTDTDFKTGKDLRKSTSASMVNLYEGAISFALNRKQKEVVAIQISQFSIDAKYDDVEELPRRNYKVENTSEDGTPCRLAFGSIDNIVACGTIFDSSIKVYNVKVSIDVVVDGNCSLPIPSNEGENLLSQELGSHLL Homology
BLAST of Lag0035605 vs. NCBI nr
Match: KAA0051499.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 132.1 bits (331), Expect = 6.2e-27 Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of Lag0035605 vs. NCBI nr
Match: TYJ99758.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.4 bits (324), Expect = 4.0e-26 Identity = 69/120 (57.50%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Lag0035605 vs. NCBI nr
Match: KAA0061170.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 8.9e-26 Identity = 68/120 (56.67%), Postives = 79/120 (65.83%), Query Frame = 0
BLAST of Lag0035605 vs. NCBI nr
Match: KAA0039044.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 126.7 bits (317), Expect = 2.6e-25 Identity = 68/120 (56.67%), Postives = 77/120 (64.17%), Query Frame = 0
BLAST of Lag0035605 vs. NCBI nr
Match: KAA0064276.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK01011.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 124.8 bits (312), Expect = 9.8e-25 Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Lag0035605 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08 Identity = 46/146 (31.51%), Postives = 68/146 (46.58%), Query Frame = 0
BLAST of Lag0035605 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04 Identity = 31/88 (35.23%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of Lag0035605 vs. ExPASy TrEMBL
Match: A0A5A7UDH2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00200 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.0e-27 Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of Lag0035605 vs. ExPASy TrEMBL
Match: A0A5D3BNP0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00370 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.9e-26 Identity = 69/120 (57.50%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Lag0035605 vs. ExPASy TrEMBL
Match: A0A5A7V1F5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00440 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 4.3e-26 Identity = 68/120 (56.67%), Postives = 79/120 (65.83%), Query Frame = 0
BLAST of Lag0035605 vs. ExPASy TrEMBL
Match: A0A5A7T6C7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001350 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 1.3e-25 Identity = 68/120 (56.67%), Postives = 77/120 (64.17%), Query Frame = 0
BLAST of Lag0035605 vs. ExPASy TrEMBL
Match: A0A5A7VD16 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00080 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 4.8e-25 Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|