Lag0035547 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAATGCAATGATGGCTGGATTGTCTATGCATGGTTGTGGAAAAGAAGCTTTAGAACTCTACTCAAAGATGGAGAGCCATGGTGTTGAACCCAATGATATCACATTCATTTCAGTATTTCACGCTTGTAGTCATTCTGGATTGTTACCAGAAGGGAAGAAGCATTTCAACAGAATGGTTCATGACTTTGGAATTGTTCCAAAGATCGAGCACTATGAATGCTTGGTGGATCTTCTCGGTCGAGCTGGACATCTCGACGAAGCTTACAACATCATTCAAAACATGCCCATGAGGCCGTAA ATGTGGAATGCAATGATGGCTGGATTGTCTATGCATGGTTGTGGAAAAGAAGCTTTAGAACTCTACTCAAAGATGGAGAGCCATGGTGTTGAACCCAATGATATCACATTCATTTCAGTATTTCACGCTTGTAGTCATTCTGGATTGTTACCAGAAGGGAAGAAGCATTTCAACAGAATGGTTCATGACTTTGGAATTGTTCCAAAGATCGAGCACTATGAATGCTTGGTGGATCTTCTCGGTCGAGCTGGACATCTCGACGAAGCTTACAACATCATTCAAAACATGCCCATGAGGCCGTAA ATGTGGAATGCAATGATGGCTGGATTGTCTATGCATGGTTGTGGAAAAGAAGCTTTAGAACTCTACTCAAAGATGGAGAGCCATGGTGTTGAACCCAATGATATCACATTCATTTCAGTATTTCACGCTTGTAGTCATTCTGGATTGTTACCAGAAGGGAAGAAGCATTTCAACAGAATGGTTCATGACTTTGGAATTGTTCCAAAGATCGAGCACTATGAATGCTTGGTGGATCTTCTCGGTCGAGCTGGACATCTCGACGAAGCTTACAACATCATTCAAAACATGCCCATGAGGCCGTAA MWNAMMAGLSMHGCGKEALELYSKMESHGVEPNDITFISVFHACSHSGLLPEGKKHFNRMVHDFGIVPKIEHYECLVDLLGRAGHLDEAYNIIQNMPMRP Homology
BLAST of Lag0035547 vs. NCBI nr
Match: XP_008462708.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucumis melo]) HSP 1 Score: 198.4 bits (503), Expect = 3.0e-47 Identity = 88/100 (88.00%), Postives = 97/100 (97.00%), Query Frame = 0
BLAST of Lag0035547 vs. NCBI nr
Match: KAA0062552.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK28774.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 198.0 bits (502), Expect = 3.9e-47 Identity = 88/100 (88.00%), Postives = 96/100 (96.00%), Query Frame = 0
BLAST of Lag0035547 vs. NCBI nr
Match: XP_038879151.1 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 197.2 bits (500), Expect = 6.7e-47 Identity = 88/100 (88.00%), Postives = 96/100 (96.00%), Query Frame = 0
BLAST of Lag0035547 vs. NCBI nr
Match: KAE8653622.1 (hypothetical protein Csa_007111 [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46 Identity = 86/100 (86.00%), Postives = 96/100 (96.00%), Query Frame = 0
BLAST of Lag0035547 vs. NCBI nr
Match: XP_011660280.1 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46 Identity = 86/100 (86.00%), Postives = 96/100 (96.00%), Query Frame = 0
BLAST of Lag0035547 vs. ExPASy Swiss-Prot
Match: Q9LUS3 (Pentatricopeptide repeat-containing protein At3g16610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E91 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.2e-28 Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 0
BLAST of Lag0035547 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.6e-27 Identity = 51/99 (51.52%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Lag0035547 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 6.1e-27 Identity = 49/100 (49.00%), Postives = 78/100 (78.00%), Query Frame = 0
BLAST of Lag0035547 vs. ExPASy Swiss-Prot
Match: Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 8.0e-27 Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 0
BLAST of Lag0035547 vs. ExPASy Swiss-Prot
Match: Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.0e-26 Identity = 51/99 (51.52%), Postives = 76/99 (76.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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