Homology
BLAST of Lag0035501 vs. NCBI nr
Match:
CCA66050.1 (hypothetical protein [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 215.7 bits (548), Expect = 6.8e-52
Identity = 160/484 (33.06%), Postives = 219/484 (45.25%), Query Frame = 0
Query: 12 ETPWMVGGDFNANLYQNEKEGGRAKSKSELNGFREAVDSCSLIDFGFTG------RGLRR 71
E P + GGDFN L +EKEGG ++ + + GFR +D CSL D F G RG R
Sbjct: 130 EGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQWHTWERG--R 189
Query: 72 VIEGRVREQSGRELTDA--LETWHYKCFSHTLR-------------GAEFIDLRRP-GCW 131
E R+RE+ R + L + H +R G E + RR G W
Sbjct: 190 SPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPRRRAGGFW 249
Query: 132 IRDLW------------RWLRAVGGQVCR-----LDRREEW------------------- 191
W W A GG++C + W
Sbjct: 250 FETFWLLDDTCEEVVRGAWNAAEGGRICEKLGAVARELQGWSKKTFGSLRKKIEAVEKKL 309
Query: 192 ---QGD------WEMPGG-----NEALGKGESYRQLR------------PDWRRYSWRKR 251
QG+ WE G +E K E+Y LR + + +R
Sbjct: 310 HAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTSYFHHKASQR 369
Query: 252 RKRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDVVTAGVRRSVTDEM 311
+KRNLI G+ D GG + E EI +V YF+ IFTSS P++ D V V+RSVT E
Sbjct: 370 KKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQEVLQHVKRSVTQEY 429
Query: 312 NRRLMRPFHQEEILLALKQMHPNKAPGSDGLSGL-------------------------- 371
N L++P+ +EEI AL MHP KAPG DG+ +
Sbjct: 430 NDILLKPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFVSSILHNYSC 489
BLAST of Lag0035501 vs. NCBI nr
Match:
XP_030942013.1 (uncharacterized protein LOC115967068 [Quercus lobata])
HSP 1 Score: 208.8 bits (530), Expect = 8.3e-50
Identity = 144/452 (31.86%), Postives = 219/452 (48.45%), Query Frame = 0
Query: 4 IETSSGDAETPWMVGGDFNANLYQNEKEGGRAKSKSELNGFREAVDSCSLIDFGFTGRGL 63
I + + PW++ GDFN ++ +EK G + ++ GFR+ + C L+D GF G+
Sbjct: 100 IRSLKRQCDLPWVIFGDFNEIVHSDEKLGWLDRDARQMEGFRDCLADCGLVDLGFVGQRY 159
Query: 64 RRVIEGRVREQSGRELTD---ALETW-----HYKCFSHTLRGAEF----IDLRRP----- 123
GR+ EQ D A E W K + + ++ + LRR
Sbjct: 160 -TWCNGRIGEQRTLVRLDRMVANEKWLNMFREAKVYHRAMAASDHCLLNLSLRRQIQDRL 219
Query: 124 GCWIRDLWRWLRAVGGQV--------CRLDRREEWQGDWEMPGGNEALGKGESYRQLRPD 183
C+ L W + V G V RL E E + L K + LR +
Sbjct: 220 KCYQDSLQTWNKRVFGNVNKTLKLKQNRLQELEMLNLLHEPVEEIKVLKKEINEVTLREE 279
Query: 184 --WRRYS---WRK---------------RRKRNLIRGLVDSGGVMRHEPGEIVGLVSEYF 243
W + S W K RR++N I+GL D+ G + + E+ G++ YF
Sbjct: 280 MMWNQRSRAVWVKCGDRNTKFFHETASNRRRKNRIKGLCDNEGRWKEDKEEVEGIILNYF 339
Query: 244 ENIFTSSCPTAKDIDVVTAGVRRSVTDEMNRRLMRPFHQEEILLALKQMHPNKAPGSDGL 303
+ IF++S P + + R V+D+MN L++ F +EE+ ALKQMHP K+PG + +
Sbjct: 340 QEIFSTSYP--DEFGCSLGAIERRVSDDMNDDLLQEFREEELRRALKQMHPTKSPGPNSM 399
Query: 304 SGLSLGSH---------------------------------------GRVSKFRPISLCN 363
S + S+ ++S+FRPISLCN
Sbjct: 400 SPIFFQSYWDVVGPQVVDCVLNTLKTGVMPNGLNDTYICLIPKVNCPQKMSEFRPISLCN 459
Query: 364 VVYKLVFKALVNRMKGILNMLISQNQSAFIPGRCVVDNVILGYECIHAL-KKRRGKTEWA 371
V+YK+V K L NR+K +L +IS+ QSAF+PGR + DNV++ +E +H + +KR GK
Sbjct: 460 VIYKIVSKVLANRLKKVLPAIISEAQSAFVPGRQITDNVLVAFETMHYINQKRMGKKGLM 519
BLAST of Lag0035501 vs. NCBI nr
Match:
OMO59710.1 (reverse transcriptase [Corchorus capsularis])
HSP 1 Score: 206.1 bits (523), Expect = 5.4e-49
Identity = 156/490 (31.84%), Postives = 217/490 (44.29%), Query Frame = 0
Query: 12 ETPWMVGGDFNANLYQNEKEGGRAKSKSELNGFREAVDSCSLIDFGFTG------RGLRR 71
E W GDFN L+Q EK+GGR + ++++ FREA+D C L D G+ G RG+
Sbjct: 559 EKNWFCFGDFNELLWQAEKDGGRERPEAQMVAFREALDDCGLYDIGYRGNMFTWKRGMGN 618
Query: 72 VIEGRVREQSGRELTDALETWHYKCFSH----------TLRGAEFIDLRRP--------- 131
R G + + C +H L E RR
Sbjct: 619 NEFIHERLDRGVATFEWTSRFPTACITHLSSSVSDHSPILLNTEVKQRRRKKQSCSCKQN 678
Query: 132 -----------------GCW---------------------------------IRDLWRW 191
CW I +L +
Sbjct: 679 FFEAGWCKEADCEKLVVDCWEFTDGLGLLDRIVQLRDSLGKKYDQQFRSLRERIDELSKK 738
Query: 192 LRAVGGQVCRLDRREEWQGDWEMPGGNEALGKGESYRQLRPDWRRYSW------------ 251
L + G + EE + E+ N L + ES+ W R +W
Sbjct: 739 LNKISGVGGHVRNSEEVELREEI---NRLLEEEESFWL---QWSRVNWLSEGDRNTSFFH 798
Query: 252 ---RKRRKRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDVVTAGVRR 311
KRRK+N I L G + +P EI + S YF+ +F SS +K D + V
Sbjct: 799 AQASKRRKKNSIEQLEGENGRLSDDPVEIQDIASAYFKKLFISS--GSKHYDEILEAVNP 858
Query: 312 SVTDEMNRRLMRPFHQEEILLALKQMHPNKAPGSDGLS-----------GLSLGS----- 371
S+T EMN L+ F EEI ALKQ+HP KAPG DG+ G + S
Sbjct: 859 SITTEMNEHLLADFTAEEIFTALKQIHPTKAPGPDGMPVFFFKKFWHIVGSDVTSFCLDF 918
BLAST of Lag0035501 vs. NCBI nr
Match:
XP_010686122.1 (PREDICTED: uncharacterized protein LOC104900404 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 202.6 bits (514), Expect = 5.9e-48
Identity = 151/482 (31.33%), Postives = 214/482 (44.40%), Query Frame = 0
Query: 14 PWMVGGDFNANLYQNEKEGGRAKSKSELNGFREAVDSCSLIDFGFTGRGLR----RVIEG 73
P ++GGDFN L +EK+GG + + + GFRE +D+C L D G+ E
Sbjct: 321 PLVLGGDFNEILSYDEKQGGADRERRAMRGFREVIDTCGLRDLRAVGQWYTWERGDSPET 380
Query: 74 RVREQSGRELTDA--LETWHYKCFSHTLR-----GAEFIDLRRP---GCWIRDL---WRW 133
R+RE+ R L L+ + H +R A + + P C +R +W
Sbjct: 381 RIRERLDRFLVSQTWLQLFPEAVVEHLVRYKSDHAAIVLKTQAPKMKQCHMRQFKFETKW 440
Query: 134 LRAVGGQVCRLDRREEWQGD------------------WEMPGGNEALGK---------- 193
L G C RE W G W G + K
Sbjct: 441 LLEEG---CEATVREAWDGSVGDPIQSRLGVVARGLVGWSKAGSGDLAKKIDRVEKQLHN 500
Query: 194 --------------GESYRQL-------------------------RPDWRRYSWRKRRK 253
GE ++L + + +R+K
Sbjct: 501 AQKEEISETTCKKCGELEKELDSLNAKLEAHWYMRSRVAEIKDGDRNTSYFHHKASQRKK 560
Query: 254 RNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDVVTAGVRRSVTDEMNR 313
RN I+GL D G R E E+ LV +YF IFTSS P+ +D V V++SVT E N
Sbjct: 561 RNRIKGLFDEHGEWREEEEELERLVQKYFREIFTSSDPSTGAMDEVLQFVKKSVTTEFND 620
Query: 314 RLMRPFHQEEILLALKQMHPNKAPGSDGLSGL---------------------------- 372
L++P+ +EEI ALKQMHP KAPG DGL +
Sbjct: 621 ILLKPYSKEEIHEALKQMHPCKAPGPDGLHAIFYQRFWHIIGDEVFHFVSNILHSYCCPS 680
BLAST of Lag0035501 vs. NCBI nr
Match:
XP_010684899.1 (PREDICTED: uncharacterized protein LOC104899410 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 202.2 bits (513), Expect = 7.8e-48
Identity = 152/452 (33.63%), Postives = 217/452 (48.01%), Query Frame = 0
Query: 12 ETPWMVGGDFNANLYQNEKEGGRAKSKSELNGFREAVDSCSLIDFGFTG------RGLRR 71
E P + GGDFN L +EKEGG ++ + + GFR +D CSL + F G RG R
Sbjct: 390 EGPVVFGGDFNEILSYDEKEGGASRERRAMVGFRNVMDDCSLRELRFVGQWHTWERG--R 449
Query: 72 VIEGRVREQSGRELTDA--LETWHYKCFSHTLR-------------GAEFIDLRRPG--- 131
E R+RE+ R + L + H +R G E + RR G
Sbjct: 450 SPESRIRERLDRFIVSRSWLNIFPEAFIDHKVRYCSDHAAIVLRCLGNEGMLRRRDGGFR 509
Query: 132 ---CWIRD-------LWRWLRAVGGQVCRL--DRREEWQGDWEMPGGN------------ 191
W+ D + W A G++C E QG + G+
Sbjct: 510 FETFWLLDDACEEVVMGAWSAAEDGRICEKLGVVARELQGWSKKSFGSLRKKIEVVEKKL 569
Query: 192 -----EALG-------------------KGESYRQLR------------PDWRRYSWRKR 251
EA+ K E++ +R + + +R
Sbjct: 570 HEAQCEAISNDSCERCVSMEKELDELHTKNEAHLYMRSRVAEVKDGDRNTSYFHHKASQR 629
Query: 252 RKRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDVVTAGVRRSVTDEM 311
+KRNLI G+ D GG + E EI +V YF+ IFTSS P+ D V V+ VT E
Sbjct: 630 KKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSSEPSFDDFQEVLQHVKVFVTQEY 689
Query: 312 NRRLMRPFHQEEILLALKQMHPNKAPGSDG---LSGLSLGSHGR----VSKFRPISLCNV 371
N L+ P+ +EEI AL MHP KAPG DG + ++L + VS+FRPISLCNV
Sbjct: 690 NDVLLMPYSKEEIFAALSDMHPCKAPGPDGNVNCTNIALIPKVKPPTVVSEFRPISLCNV 749
BLAST of Lag0035501 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 6.5e-13
Identity = 67/231 (29.00%), Postives = 98/231 (42.42%), Query Frame = 0
Query: 165 RKRRKRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDVVTAGVRRSVT 224
+K+ R I L G +P I +++N+F S P + D V+
Sbjct: 380 KKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLF-SPDPISPDACEELWDGLPVVS 439
Query: 225 DEMNRRLMRPFHQEEILLALKQMHPNKAPGSDGL-------------------------- 284
+ RL P +E+ AL+ M NK+PG DGL
Sbjct: 440 ERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKK 499
Query: 285 ---------SGLSL----GSHGRVSKFRPISLCNVVYKLVFKALVNRMKGILNMLISQNQ 344
+ LSL G + +RP+SL + YK+V KA+ R+K +L +I +Q
Sbjct: 500 GELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQ 559
Query: 345 SAFIPGRCVVDNVILGYECIHALKKRRGKTEWASLKLDMSKAYDRVEWVYL 357
S +PGR + DNV L + +H RR A L LD KA+DRV+ YL
Sbjct: 560 SYTVPGRTIFDNVFLIRDLLHF--ARRTGLSLAFLSLDQEKAFDRVDHQYL 607
BLAST of Lag0035501 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 1.0e-10
Identity = 56/243 (23.05%), Postives = 105/243 (43.21%), Query Frame = 0
Query: 165 RKRRKRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDID-VVTAGVRRSV 224
RK+R ++LI + + + +P EI +++EY++ +++ K+ID + A +
Sbjct: 381 RKKRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLPRL 440
Query: 225 TDEMNRRLMRPFHQEEILLALKQMHPNKAPGSDGLSG--------------LSLGSH--- 284
+ + L RP EI ++ + K+PG DG + L+L +
Sbjct: 441 SQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEK 500
Query: 285 -----------------------GRVSKFRPISLCNVVYKLVFKALVNRMKGILNMLISQ 344
R +RPISL N+ K++ K L NR++ + +I
Sbjct: 501 EGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHH 560
Query: 345 NQSAFIPGRCVVDNVILGYECIHALKKRRGKTEWASLKLDMSKAYDRVEWVYLEQIMLKM 367
+Q FIPG N+ I + K + K + L +D KA+D ++ ++ + + K+
Sbjct: 561 DQVGFIPGSQGWFNIRKSINVIQHINKLKNK-DHMILSIDAEKAFDNIQHPFMIRTLKKI 620
BLAST of Lag0035501 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 67.0 bits (162), Expect = 5.1e-10
Identity = 52/243 (21.40%), Postives = 102/243 (41.98%), Query Frame = 0
Query: 165 RKRRKRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDV-VTAGVRRSV 224
+K+R++N I + + G + +P EI + EY+++++ + +++D + +
Sbjct: 382 KKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRL 441
Query: 225 TDEMNRRLMRPFHQEEILLALKQMHPNKAPGSDGLSG------------------LSLGS 284
E L RP EI+ + + K+PG DG + S+
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
Query: 285 HG----------------------RVSKFRPISLCNVVYKLVFKALVNRMKGILNMLISQ 344
G + FRPISL N+ K++ K L NR++ + LI
Sbjct: 502 EGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHH 561
Query: 345 NQSAFIPGRCVVDNVILGYECIHALKKRRGKTEWASLKLDMSKAYDRVEWVYLEQIMLKM 367
+Q FIPG N+ I + + + K + +D KA+D+++ ++ + + K+
Sbjct: 562 DQVGFIPGMQGWFNIRKSINVIQHINRAKDKNH-VIISIDAEKAFDKIQQPFMLKTLNKL 621
BLAST of Lag0035501 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 59.3 bits (142), Expect = 1.1e-07
Identity = 50/243 (20.58%), Postives = 102/243 (41.98%), Query Frame = 0
Query: 168 RKRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDVVTAGVRRSVTDEM 227
R + LI + + G + +P EI + +++ ++++ +++D + + R ++
Sbjct: 392 RDKILINKIRNEKGDITTDPEEIQNTIRSFYKRLYSTK---LENLDEMDKFLDRYQVPKL 451
Query: 228 NR----RLMRPFHQEEILLALKQMHPNKAPGSDGLSG----------------------- 287
N+ L P +EI + + K+PG DG S
Sbjct: 452 NQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEV 511
Query: 288 ------------LSL-----GSHGRVSKFRPISLCNVVYKLVFKALVNRMKGILNMLISQ 347
++L ++ FRPISL N+ K++ K L NR++ + +I
Sbjct: 512 EGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHP 571
Query: 348 NQSAFIPGRCVVDNVILGYECIHALKKRRGKTEWASLKLDMSKAYDRVEWVYLEQIMLKM 367
+Q FIPG N+ IH + K + K + LD KA+D+++ ++ +++ +
Sbjct: 572 DQVGFIPGMQGWFNIRKSINVIHYINKLKDKNHMI-ISLDAEKAFDKIQHPFMIKVLERS 630
BLAST of Lag0035501 vs. ExPASy TrEMBL
Match:
F4NCJ4 (Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 3.3e-52
Identity = 160/484 (33.06%), Postives = 219/484 (45.25%), Query Frame = 0
Query: 12 ETPWMVGGDFNANLYQNEKEGGRAKSKSELNGFREAVDSCSLIDFGFTG------RGLRR 71
E P + GGDFN L +EKEGG ++ + + GFR +D CSL D F G RG R
Sbjct: 130 EGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQWHTWERG--R 189
Query: 72 VIEGRVREQSGRELTDA--LETWHYKCFSHTLR-------------GAEFIDLRRP-GCW 131
E R+RE+ R + L + H +R G E + RR G W
Sbjct: 190 SPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPRRRAGGFW 249
Query: 132 IRDLW------------RWLRAVGGQVCR-----LDRREEW------------------- 191
W W A GG++C + W
Sbjct: 250 FETFWLLDDTCEEVVRGAWNAAEGGRICEKLGAVARELQGWSKKTFGSLRKKIEAVEKKL 309
Query: 192 ---QGD------WEMPGG-----NEALGKGESYRQLR------------PDWRRYSWRKR 251
QG+ WE G +E K E+Y LR + + +R
Sbjct: 310 HAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTSYFHHKASQR 369
Query: 252 RKRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDVVTAGVRRSVTDEM 311
+KRNLI G+ D GG + E EI +V YF+ IFTSS P++ D V V+RSVT E
Sbjct: 370 KKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQEVLQHVKRSVTQEY 429
Query: 312 NRRLMRPFHQEEILLALKQMHPNKAPGSDGLSGL-------------------------- 371
N L++P+ +EEI AL MHP KAPG DG+ +
Sbjct: 430 NDILLKPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFVSSILHNYSC 489
BLAST of Lag0035501 vs. ExPASy TrEMBL
Match:
A0A2N9IZB6 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57536 PE=4 SV=1)
HSP 1 Score: 208.4 bits (529), Expect = 5.2e-50
Identity = 143/383 (37.34%), Postives = 203/383 (53.00%), Query Frame = 0
Query: 14 PWMVGGDFNANLYQNEKEGGRAKSKSELNGFREAVDSCSLIDFGFTGRGL----RRVIEG 73
PWMV DFN + +E+ G +S +++ F+EA+ L D GF G RR+ E
Sbjct: 505 PWMVFSDFNEAISLDEQCGKEDRSLNQMASFKEALVDYELQDLGFKGPEFTWSNRRLGED 564
Query: 74 RVREQSGRELTDALETWHYKCFSHTLRGAEFIDLRRPGCWIRDLWRWLRAVGGQVCRLDR 133
VR + R +++ W+ A+ + P + +R + L+
Sbjct: 565 LVRVRLDRAVSN--PAWNL-----LFPNAQVSHIIVPSSDHLRVLVEIRPNPARAQLLEM 624
Query: 134 REEWQGDWEMPGGNEALGKGESYRQLRPD--WR---RYSW---------------RKRRK 193
+ ++ G N AL K + + + WR R +W +R++
Sbjct: 625 ESKPMVTYDAQGVN-ALRKEITSLLAKEEVAWRQRSRVNWLADGDQNTGFFHECAAQRKR 684
Query: 194 RNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDVVTAGVRRSVTDEMNR 253
N I+GL+D R +P E+ + + YF +FTSS PT D+D V V VT +MN
Sbjct: 685 TNTIQGLLDREDYWRTDPHEVEQIATAYFNTLFTSSRPT--DVDDVVQVVESVVTADMNE 744
Query: 254 RLMRPFHQEEILLALKQMHPNKAPGSDGLSGLSLGSHGRVSKFRPISLCNVVYKLVFKAL 313
L+RPF +E+ AL QMHP+KAPG D S S+ S+FRPISLCNV+YK++ K L
Sbjct: 745 DLLRPFSPDEVKQALFQMHPSKAPGPDVKSPESM------SQFRPISLCNVIYKIISKIL 804
Query: 314 VNRMKGILNMLISQNQSAFIPGRCVVDNVILGYECIHALKK-RRGKTEWASLKLDMSKAY 372
VNRMK +L +IS++Q AF+PGR + DNVI+ +E IH LK R GK + KLDMSKAY
Sbjct: 805 VNRMKQVLPRVISESQRAFVPGRMITDNVIIAFEAIHHLKNLRGGKNAQLAAKLDMSKAY 864
BLAST of Lag0035501 vs. ExPASy TrEMBL
Match:
A0A1R3GNW3 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_24647 PE=4 SV=1)
HSP 1 Score: 206.1 bits (523), Expect = 2.6e-49
Identity = 156/490 (31.84%), Postives = 217/490 (44.29%), Query Frame = 0
Query: 12 ETPWMVGGDFNANLYQNEKEGGRAKSKSELNGFREAVDSCSLIDFGFTG------RGLRR 71
E W GDFN L+Q EK+GGR + ++++ FREA+D C L D G+ G RG+
Sbjct: 559 EKNWFCFGDFNELLWQAEKDGGRERPEAQMVAFREALDDCGLYDIGYRGNMFTWKRGMGN 618
Query: 72 VIEGRVREQSGRELTDALETWHYKCFSH----------TLRGAEFIDLRRP--------- 131
R G + + C +H L E RR
Sbjct: 619 NEFIHERLDRGVATFEWTSRFPTACITHLSSSVSDHSPILLNTEVKQRRRKKQSCSCKQN 678
Query: 132 -----------------GCW---------------------------------IRDLWRW 191
CW I +L +
Sbjct: 679 FFEAGWCKEADCEKLVVDCWEFTDGLGLLDRIVQLRDSLGKKYDQQFRSLRERIDELSKK 738
Query: 192 LRAVGGQVCRLDRREEWQGDWEMPGGNEALGKGESYRQLRPDWRRYSW------------ 251
L + G + EE + E+ N L + ES+ W R +W
Sbjct: 739 LNKISGVGGHVRNSEEVELREEI---NRLLEEEESFWL---QWSRVNWLSEGDRNTSFFH 798
Query: 252 ---RKRRKRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDVVTAGVRR 311
KRRK+N I L G + +P EI + S YF+ +F SS +K D + V
Sbjct: 799 AQASKRRKKNSIEQLEGENGRLSDDPVEIQDIASAYFKKLFISS--GSKHYDEILEAVNP 858
Query: 312 SVTDEMNRRLMRPFHQEEILLALKQMHPNKAPGSDGLS-----------GLSLGS----- 371
S+T EMN L+ F EEI ALKQ+HP KAPG DG+ G + S
Sbjct: 859 SITTEMNEHLLADFTAEEIFTALKQIHPTKAPGPDGMPVFFFKKFWHIVGSDVTSFCLDF 918
BLAST of Lag0035501 vs. ExPASy TrEMBL
Match:
A0A2N9IXL7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57999 PE=4 SV=1)
HSP 1 Score: 205.7 bits (522), Expect = 3.4e-49
Identity = 144/390 (36.92%), Postives = 201/390 (51.54%), Query Frame = 0
Query: 12 ETPWMVGGDFNANLYQNEKEGGRAKSKSELNGFREAVDSCSLIDFGFTG--------RGL 71
E PWMV GDFN +E+ G +++++++ FREA+ C L+D GF+G RG
Sbjct: 515 EVPWMVLGDFNEITRLDEQVGQVDRNEAQMSSFREALLDCDLLDLGFSGPVCTWSNNRGH 574
Query: 72 RRVIEGRV-REQSGRELTD-----ALETWHYKCFSHT--------LRGAEFIDLRRPGCW 131
++ R+ R + E + C H G + +D RR +
Sbjct: 575 TALVRARLDRAVASAEWMSLFPMATISHLAVACSDHMGLLLNTNGNSGEQRVDRRRKKLF 634
Query: 132 IRDLWRWLRAVGGQVCRLDRREEWQGDWE-MPGGNEALGKGESYRQLRPDWRRYSWRKRR 191
R W+R VG + E G W +P G E +Q R
Sbjct: 635 -RFEKAWIREVGCE-------EVIAGAWNVIPIGTAMYWVAEKIKQCR------------ 694
Query: 192 KRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPTAKDIDVVTAGVRRSVTDEMN 251
NLI+ + P EI + YF +IFTSS P A I V + V VT MN
Sbjct: 695 -MNLIQWSQAHDSTWQSTPAEIERIAVAYFNHIFTSSNPQA--IVEVVSEVDGVVTPGMN 754
Query: 252 RRLMRPFHQEEILLALKQMHPNKAPGSDGLSGLS-------LGSHGRVSKFRPISLCNVV 311
L++PF +EE+ AL QM+P+KAPG DG + + + ++++FRPISLCNV+
Sbjct: 755 EELLKPFVKEEVQKALFQMYPSKAPGPDGSINFTHIVLIPKVTAPEQITQFRPISLCNVL 814
Query: 312 YKLVFKALVNRMKGILNMLISQNQSAFIPGRCVVDNVILGYECIHALKK-RRGKTEWASL 371
YK+ K LVNRMK +L +IS++QSAF+P R + DNVI+ +E IH LK R+G +
Sbjct: 815 YKIASKVLVNRMKTMLPQVISESQSAFVPERMITDNVIIAFENIHYLKNLRQGNNVQMAA 874
BLAST of Lag0035501 vs. ExPASy TrEMBL
Match:
A0A2N9EV35 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6577 PE=4 SV=1)
HSP 1 Score: 204.9 bits (520), Expect = 5.8e-49
Identity = 143/441 (32.43%), Postives = 211/441 (47.85%), Query Frame = 0
Query: 14 PWMVGGDFNANLYQNEKEGGRAKSKSELNGFREAVDSCSLIDFGFTGRGLR--RVIEGRV 73
PW+ GDFN + QNEK G +S +++ FRE + C+L+D GF+G +G
Sbjct: 600 PWLCFGDFNEIMVQNEKRGRYPRSLAKMCAFREVANRCNLLDMGFSGYEFTWDNNRDGMA 659
Query: 74 REQSGRELTDALETW----------------------------HYKCFSHTLRGAEFID- 133
Q + A TW H + F +
Sbjct: 660 NVQERIDRAFASPTWSNWFPNSHVSHLPVFSSDHLPILVEVGQHVSALPRRKKPHRFEEK 719
Query: 134 -LRRPGC--WIRDLWRWLRAVGGQVCRLDRREEWQGDWEMPGGNEALGKGESYRQ-LRPD 193
+ P C IR LW+ VG + L + + + E G ++Q +R
Sbjct: 720 WIANPECEEIIRFLWQQEGDVGSPMYCLTEKLKRCRMGLVQWSKEKYGDEIHWKQRVRTV 779
Query: 194 WRRYSWR----------KRRKRNLIRGLVDSGGVMRHEPGEIVGLVSEYFENIFTSSCPT 253
W + R +R+K N + GL+DS +P + + ++YF+ +FT+S P+
Sbjct: 780 WLKVGDRNTRFFHQSATQRKKNNTVTGLMDSHDQWCTDPDGMGVIAADYFKELFTTSNPS 839
Query: 254 AKDIDVVTAGVRRSVTDEMNRRLMRPFHQEEILLALKQMHPNKAPGSDGLSGL------- 313
ID V R VT EMNRRL+ P++ EI AL QMHP+K+PG DG+S +
Sbjct: 840 R--IDNTLLAVDRVVTPEMNRRLLLPYNAVEIKRALFQMHPSKSPGPDGMSCIFFQKFWH 899
Query: 314 --------------------------------SLGSHGRVSKFRPISLCNVVYKLVFKAL 370
+ + ++S +RPISLCNVVYK++ K L
Sbjct: 900 IIGCDVVQAISYVLTSGHMLKKINFTHIALIPKIKNPQQLSDYRPISLCNVVYKMISKCL 959
BLAST of Lag0035501 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 83.6 bits (205), Expect = 3.8e-16
Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 0
Query: 289 LVNRMKGILNMLISQNQSAFIPGRCVVDNVILGYECIHALKKRRGKTEWASLKLDMSKAY 348
+V R+K ++ LI Q++FIPGR DN++ E +H++++++G W LKLD+ KAY
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 349 DRVEWVYLEQIMLKMGFEQGWV 371
DR+ W YLE ++ GF + W+
Sbjct: 61 DRIRWDYLEDTLISAGFPEVWL 82
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
CCA66050.1 | 6.8e-52 | 33.06 | hypothetical protein [Beta vulgaris subsp. vulgaris] | [more] |
XP_030942013.1 | 8.3e-50 | 31.86 | uncharacterized protein LOC115967068 [Quercus lobata] | [more] |
OMO59710.1 | 5.4e-49 | 31.84 | reverse transcriptase [Corchorus capsularis] | [more] |
XP_010686122.1 | 5.9e-48 | 31.33 | PREDICTED: uncharacterized protein LOC104900404 [Beta vulgaris subsp. vulgaris] | [more] |
XP_010684899.1 | 7.8e-48 | 33.63 | PREDICTED: uncharacterized protein LOC104899410 [Beta vulgaris subsp. vulgaris] | [more] |
Match Name | E-value | Identity | Description | |
P14381 | 6.5e-13 | 29.00 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
P08548 | 1.0e-10 | 23.05 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
O00370 | 5.1e-10 | 21.40 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P11369 | 1.1e-07 | 20.58 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
Match Name | E-value | Identity | Description | |
F4NCJ4 | 3.3e-52 | 33.06 | Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris... | [more] |
A0A2N9IZB6 | 5.2e-50 | 37.34 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A1R3GNW3 | 2.6e-49 | 31.84 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_24647 PE=4 SV... | [more] |
A0A2N9IXL7 | 3.4e-49 | 36.92 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57999 PE=4 SV=1 | [more] |
A0A2N9EV35 | 5.8e-49 | 32.43 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6577 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G20520.1 | 3.8e-16 | 40.24 | RNA binding;RNA-directed DNA polymerases | [more] |