Lag0035496 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0035496
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr3: 22720442 .. 22721256 (-)
RNA-Seq Expression	Lag0035496
Synteny	Lag0035496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAAGAAAGGGTAAATGGAAAGGGACAGAAAGAGAAGGGTAAAATGAGAATATTCTAATTTTTTTTGTCATATTTGAAATTCTTTTTAACTTGTGCTAAAGTAAGCTTAATTAATCTAATCTAATCCTAAAACTAACTAAAACAATAAAATAAATCAGGAAAAGGAAATACAAACCAAAAGTAAACTGTAAAAATTTAAAATTCTAACCAAATTCGGCTAACGAAAAGCTAAATATTTATAGGAACTCCAGATAGCAACGAGACGTTGTCCATAGCGTCAAGGCTACAGACGGAAGCTAATGGAAGAAAGGTGTGCACGCTTAATTACAGCGTCTCGATGCTATGGACAGAACTTCAAGGAACACACCTTTTTAGTGTCAAGACTCAAGTGATCAACACTACAGATCGTTGTCCAATGTCTCAACGCCTAGCCTTGGGTTTGAAGGAAGAACGGGTCCTTTTGATGGCGTTTTGACTCTCAAGACACTGCCTTCTGTGGATTTATATGAAGATTTTGTGGATTTGGCGTCGTCATCTCTTGGGTTTGTTCTTTGTTTTATCGTCTTGCATGTCGATTTCGTCTTCTTCTATGGTAGGTTCTATCCTATAAAGTCTTCTGCCACTCCAGAACCGGACCAAAACGACCTGAACCACCTTGAAAACCATGAACCAAGCCAACCCAACCCAAAACAAGACCAACCCGCGCGAACCATGCCAAACCGCCCCAAAAACCAAACCGAACTGTGTTTGCCAGCATGCTCCTCGTTCTCGCTAGAATTCGCGTCAGCATCTGGACGTTACGCCTTCTAG

mRNA sequence

ATGAGGGAAGAAAGGGTAAATGGAAAGGGACAGAAAGAGAAGGGAACTCCAGATAGCAACGAGACGTTGTCCATAGCGTCAAGGCTACAGACGGAAGCTAATGGAAGAAAGTGTCAAGACTCAAGTGATCAACACTACAGATCGTTGTCCAATGTCTCAACGCCTAGCCTTGGGTTTGAAGGAAGAACGGGTCCTTTTGATGGCGTTTTGACTCTCAAGACACTGCCTTCTGTGGATTTATATGAAGATTTTGTGGATTTGGCGTCGTCATCTCTTGGGTTTGTTCTTTGTTTTATCGTCTTGCATGTCGATTTCGTCTTCTTCTATGGTAGGTTCTATCCTATAAAGTCTTCTGCCACTCCAGAACCGGACCAAAACGACCTGAACCACCTTGAAAACCATGAACCAAGCCAACCCAACCCAAAACAAGACCAACCCGCGCGAACCATGCCAAACCGCCCCAAAAACCAAACCGAACTGTGTTTGCCAGCATGCTCCTCGTTCTCGCTAGAATTCGCGTCAGCATCTGGACGTTACGCCTTCTAG

Coding sequence (CDS)

ATGAGGGAAGAAAGGGTAAATGGAAAGGGACAGAAAGAGAAGGGAACTCCAGATAGCAACGAGACGTTGTCCATAGCGTCAAGGCTACAGACGGAAGCTAATGGAAGAAAGTGTCAAGACTCAAGTGATCAACACTACAGATCGTTGTCCAATGTCTCAACGCCTAGCCTTGGGTTTGAAGGAAGAACGGGTCCTTTTGATGGCGTTTTGACTCTCAAGACACTGCCTTCTGTGGATTTATATGAAGATTTTGTGGATTTGGCGTCGTCATCTCTTGGGTTTGTTCTTTGTTTTATCGTCTTGCATGTCGATTTCGTCTTCTTCTATGGTAGGTTCTATCCTATAAAGTCTTCTGCCACTCCAGAACCGGACCAAAACGACCTGAACCACCTTGAAAACCATGAACCAAGCCAACCCAACCCAAAACAAGACCAACCCGCGCGAACCATGCCAAACCGCCCCAAAAACCAAACCGAACTGTGTTTGCCAGCATGCTCCTCGTTCTCGCTAGAATTCGCGTCAGCATCTGGACGTTACGCCTTCTAG

Protein sequence

MREERVNGKGQKEKGTPDSNETLSIASRLQTEANGRKCQDSSDQHYRSLSNVSTPSLGFEGRTGPFDGVLTLKTLPSVDLYEDFVDLASSSLGFVLCFIVLHVDFVFFYGRFYPIKSSATPEPDQNDLNHLENHEPSQPNPKQDQPARTMPNRPKNQTELCLPACSSFSLEFASASGRYAF

Homology

The following BLAST results are available for this feature:

BLAST of Lag0035496 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0035496 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0035496.1	Lag0035496.1	mRNA