Lag0035403 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035403
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUncharacterised conserved protein UCP015417, vWA
Locationchr3: 20994006 .. 20994341 (+)
RNA-Seq ExpressionLag0035403
SyntenyLag0035403
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGAATCCCGGCCGAGATTCAAGAATCACCCCAAAACCCTAGCTCTCAATCTTACGGTTTTTGCTGATTTCGGCTACCTCAAAGACTTGCCTGAAATTCTCTATCGATTATTTGAAGGGCCGGAAATTCGAATCATTGCGAAGAAGGAGCGGAAGTGCGGGAAGAGGCATAACAAATATTCGTTGGAGAAGAATTCTGTGGCGTTCAAGAGGGGGATTTTGAGTAAACCAGAGATATCGGAGAAGGAGAAAGATGGGTTGTTGGAAAATTTGGAGGAATTGGGGGACAAAGAGAAGGCCAGAGCAATCAGGAAGGACAAAGAGAATGCATGA

mRNA sequence

ATGCATGAATCCCGGCCGAGATTCAAGAATCACCCCAAAACCCTAGCTCTCAATCTTACGGTTTTTGCTGATTTCGGCTACCTCAAAGACTTGCCTGAAATTCTCTATCGATTATTTGAAGGGCCGGAAATTCGAATCATTGCGAAGAAGGAGCGGAAGTGCGGGAAGAGGCATAACAAATATTCGTTGGAGAAGAATTCTGTGGCGTTCAAGAGGGGGATTTTGAGTAAACCAGAGATATCGGAGAAGGAGAAAGATGGGTTGTTGGAAAATTTGGAGGAATTGGGGGACAAAGAGAAGGCCAGAGCAATCAGGAAGGACAAAGAGAATGCATGA

Coding sequence (CDS)

ATGCATGAATCCCGGCCGAGATTCAAGAATCACCCCAAAACCCTAGCTCTCAATCTTACGGTTTTTGCTGATTTCGGCTACCTCAAAGACTTGCCTGAAATTCTCTATCGATTATTTGAAGGGCCGGAAATTCGAATCATTGCGAAGAAGGAGCGGAAGTGCGGGAAGAGGCATAACAAATATTCGTTGGAGAAGAATTCTGTGGCGTTCAAGAGGGGGATTTTGAGTAAACCAGAGATATCGGAGAAGGAGAAAGATGGGTTGTTGGAAAATTTGGAGGAATTGGGGGACAAAGAGAAGGCCAGAGCAATCAGGAAGGACAAAGAGAATGCATGA

Protein sequence

MHESRPRFKNHPKTLALNLTVFADFGYLKDLPEILYRLFEGPEIRIIAKKERKCGKRHNKYSLEKNSVAFKRGILSKPEISEKEKDGLLENLEELGDKEKARAIRKDKENA
Homology
BLAST of Lag0035403 vs. NCBI nr
Match: PON98699.1 (hypothetical protein TorRG33x02_055990 [Trema orientale])

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-22
Identity = 69/109 (63.30%), Postives = 79/109 (72.48%), Query Frame = 0

Query: 9   KNHPKTLALNLTVFADFGYLKDLPEILYRLFEGPEIRIIAKKE---RKCGKRHNKYSLEK 68
           KNHPKTLALN   FADFGYLKDLPEILYRL EG ++R IAK+E   RK GKR        
Sbjct: 97  KNHPKTLALNAKAFADFGYLKDLPEILYRLLEGSQVRKIAKQEWTNRKIGKRF------- 156

Query: 69  NSVAFKRGILSKPEISEKEKDGLLENLEELG---DKEKARAIRKDKENA 112
            SV FKR    K EISEKE++G+LENLE+LG   DKEKAR++RK +E A
Sbjct: 157 -SVKFKRESEGKSEISEKEEEGVLENLEQLGNLTDKEKARSLRKQREMA 197

BLAST of Lag0035403 vs. NCBI nr
Match: XP_022760398.1 (uncharacterized protein LOC111306768 isoform X1 [Durio zibethinus])

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-18
Identity = 60/107 (56.07%), Postives = 72/107 (67.29%), Query Frame = 0

Query: 8   FKNHPKTLALNLTVFADFGYLKDLPEILYRLFEGPEIRIIAKKERKCGKRHNKYSLEK-- 67
           F  HPKTLA NL   A+FGY KD PEILYR+ EGPE R I K+E K  KR  K    K  
Sbjct: 128 FSKHPKTLAFNLRAIAEFGYFKDFPEILYRILEGPESRKIQKEEWKDRKREGKRFSRKMN 187

Query: 68  NSVAFKRGILSKPEISEKEKDGLLENLEELG---DKEKARAIRKDKE 110
           NS  FK+    K E+S+KE DG+LEN+EE+G   DKEKAR +RK++E
Sbjct: 188 NSGKFKQESDGKIELSDKEIDGVLENVEEMGSGIDKEKARILRKERE 234

BLAST of Lag0035403 vs. NCBI nr
Match: XP_021291812.1 (uncharacterized protein LOC110422282 [Herrania umbratica])

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-17
Identity = 60/109 (55.05%), Postives = 72/109 (66.06%), Query Frame = 0

Query: 8   FKNHPKTLALNLTVFADFGYLKDLPEILYRLFEGPEIRIIAKKERKCGKRHNKYSLEKN- 67
           + NHPKTLA NL   A+FGY KD PEILYR+ EGPE+R I KKE K  KR  K    K+ 
Sbjct: 131 YSNHPKTLASNLKSIAEFGYFKDFPEILYRILEGPELRKIQKKEFKDRKRGRKRFSRKSK 190

Query: 68  -SVAFKRGILSKPEISEKEKDGLLENLEELG---DKEKARAIRKDKENA 112
            S  FK     K EIS+KE DG+L  +EE+G   DKEKAR +RK++E A
Sbjct: 191 PSRRFKLESDGKEEISDKEIDGILGTVEEMGSGIDKEKARIMRKEREKA 239

BLAST of Lag0035403 vs. NCBI nr
Match: XP_016742790.1 (uncharacterized protein LOC107952057 [Gossypium hirsutum] >KAG4179452.1 hypothetical protein ERO13_A10G107000v2 [Gossypium hirsutum])

HSP 1 Score: 99.0 bits (245), Expect = 2.8e-17
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 0

Query: 8   FKNHPKTLALNLTVFADFGYLKDLPEILYRLFEGPEIRIIAKKERKCGKRHNKYSLE--K 67
           F  HPKTLA NL   ++FGY KD PEILYR+ EGPE R I + E +  KR  K S +  K
Sbjct: 119 FSKHPKTLAFNLKAISEFGYFKDFPEILYRILEGPESRKIQRMEWQDRKRGGKRSSKKIK 178

Query: 68  NSVAFKRGILSKPEISEKEKDGLLENLEELG---DKEKARAIRKDKENA 112
           N   FK+    K E SEK+ +G+LEN+EE+G   DKEKARA+RK++E A
Sbjct: 179 NRGKFKQESNEKVEASEKKFEGVLENVEEMGRGIDKEKARALRKEREKA 227

BLAST of Lag0035403 vs. NCBI nr
Match: XP_017609503.1 (PREDICTED: uncharacterized protein LOC108455460 [Gossypium arboreum])

HSP 1 Score: 99.0 bits (245), Expect = 2.8e-17
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 0

Query: 8   FKNHPKTLALNLTVFADFGYLKDLPEILYRLFEGPEIRIIAKKERKCGKRHNKYSLE--K 67
           F  HPKTLA NL   ++FGY KD PEILYR+ EGPE R I + E +  KR  K S +  K
Sbjct: 92  FSKHPKTLAFNLKAISEFGYFKDFPEILYRILEGPESRKIQRMEWQDRKRGGKRSSKKIK 151

Query: 68  NSVAFKRGILSKPEISEKEKDGLLENLEELG---DKEKARAIRKDKENA 112
           N   FK+    K E SEK+ +G+LEN+EE+G   DKEKARA+RK++E A
Sbjct: 152 NRGKFKQESNEKVEASEKKFEGVLENVEEMGRGIDKEKARALRKEREKA 200

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON98699.11.7e-2263.30hypothetical protein TorRG33x02_055990 [Trema orientale][more]
XP_022760398.12.5e-1856.07uncharacterized protein LOC111306768 isoform X1 [Durio zibethinus][more]
XP_021291812.12.1e-1755.05uncharacterized protein LOC110422282 [Herrania umbratica][more]
XP_016742790.12.8e-1753.21uncharacterized protein LOC107952057 [Gossypium hirsutum] >KAG4179452.1 hypothet... [more]
XP_017609503.12.8e-1753.21PREDICTED: uncharacterized protein LOC108455460 [Gossypium arboreum][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011205Uncharacterised conserved protein UCP015417, vWAPANTHERPTHR31373OS06G0652100 PROTEINcoord: 8..109
NoneNo IPR availablePANTHERPTHR31373:SF23EMB|CAB86628.1coord: 8..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035403.1Lag0035403.1mRNA