Lag0035379 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035379
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionAA_kinase domain-containing protein
Locationchr3: 20630967 .. 20631455 (-)
RNA-Seq ExpressionLag0035379
SyntenyLag0035379
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCCAAGAGATCAAGGAAAGCCACCGCCTCTTCTTCCTTTTCTACCGCGTTCGATAGACAAAAGTTTGTTAGTAGGGATGCAGATGTGGTTTTTCACACCTATGTGGTTAAGAGAAATACAATAGTTGAGAGAGGTTTGCAACCTGACGCTTCATCTCAACCGGACCTCACCCATAGCATAATTGAAAGGGGTTGGGATAGGCTAGCAAGCCATCCTGAAGCTGTTGTCGTGCCCATCATTAGGGAGTTCTACGCCAACATGGTTGATACCTCATCCTTTGTTAGGGAGCAAACTATCCCTTTCGACTCTACCTCCATTAACCAATTTTATGGCCTTCCAAACTTCGATAGGGATGGGTATACCGAGTACGCTAGTAACCATTTTGATGCCCATCAGATCATTGAGCATCTCTGTAGGCCTGGGGCAGACTGGGTCATAAAAAGGGGGAAGCTGTTAATTTTAAGACCTCGGACCTCACAGTAG

mRNA sequence

ATGAGTTCCAAGAGATCAAGGAAAGCCACCGCCTCTTCTTCCTTTTCTACCGCGTTCGATAGACAAAAGTTTGTTAGTAGGGATGCAGATGTGGTTTTTCACACCTATGTGGTTAAGAGAAATACAATAGTTGAGAGAGGTTTGCAACCTGACGCTTCATCTCAACCGGACCTCACCCATAGCATAATTGAAAGGGGTTGGGATAGGCTAGCAAGCCATCCTGAAGCTGTTGTCGTGCCCATCATTAGGGAGTTCTACGCCAACATGGTTGATACCTCATCCTTTGTTAGGGAGCAAACTATCCCTTTCGACTCTACCTCCATTAACCAATTTTATGGCCTTCCAAACTTCGATAGGGATGGGTATACCGAGTACGCTAGTAACCATTTTGATGCCCATCAGATCATTGAGCATCTCTGTAGGCCTGGGGCAGACTGGGTCATAAAAAGGGGGAAGCTGTTAATTTTAAGACCTCGGACCTCACAGTAG

Coding sequence (CDS)

ATGAGTTCCAAGAGATCAAGGAAAGCCACCGCCTCTTCTTCCTTTTCTACCGCGTTCGATAGACAAAAGTTTGTTAGTAGGGATGCAGATGTGGTTTTTCACACCTATGTGGTTAAGAGAAATACAATAGTTGAGAGAGGTTTGCAACCTGACGCTTCATCTCAACCGGACCTCACCCATAGCATAATTGAAAGGGGTTGGGATAGGCTAGCAAGCCATCCTGAAGCTGTTGTCGTGCCCATCATTAGGGAGTTCTACGCCAACATGGTTGATACCTCATCCTTTGTTAGGGAGCAAACTATCCCTTTCGACTCTACCTCCATTAACCAATTTTATGGCCTTCCAAACTTCGATAGGGATGGGTATACCGAGTACGCTAGTAACCATTTTGATGCCCATCAGATCATTGAGCATCTCTGTAGGCCTGGGGCAGACTGGGTCATAAAAAGGGGGAAGCTGTTAATTTTAAGACCTCGGACCTCACAGTAG

Protein sequence

MSSKRSRKATASSSFSTAFDRQKFVSRDADVVFHTYVVKRNTIVERGLQPDASSQPDLTHSIIERGWDRLASHPEAVVVPIIREFYANMVDTSSFVREQTIPFDSTSINQFYGLPNFDRDGYTEYASNHFDAHQIIEHLCRPGADWVIKRGKLLILRPRTSQ
Homology
BLAST of Lag0035379 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-32
Identity = 75/154 (48.70%), Postives = 102/154 (66.23%), Query Frame = 0

Query: 1   MSSKRSRKATASSSFSTAFDRQKFVSRDADVVFHTYVVKRNTIVERGLQPDASSQPDLTH 60
           M S ++++A ++ S   AF+R KF+S+DA   +  +VVK + I ERGL P    QP L  
Sbjct: 1   MMSSKTKRARSALSSEGAFNRHKFISKDAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQ 60

Query: 61  SIIERGWDRLASHPEAVVVPIIREFYANMVDTS--SFVREQTIPFDSTSINQFYGLPNFD 120
           +I++RGW      PE  VV I+REFYANMV+ S  SFVR + + FD  +IN++Y LPNF+
Sbjct: 61  NIMQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFE 120

Query: 121 RDGYTEYASNHFDAHQIIEHLCRPGADWVIKRGK 153
           RD Y  YAS H D HQII  LC+PGA+W+I  G+
Sbjct: 121 RDEYAIYASEHVDVHQIIRELCQPGAEWIINPGE 154

BLAST of Lag0035379 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 5.8e-32
Identity = 75/154 (48.70%), Postives = 101/154 (65.58%), Query Frame = 0

Query: 1   MSSKRSRKATASSSFSTAFDRQKFVSRDADVVFHTYVVKRNTIVERGLQPDASSQPDLTH 60
           M S ++++A ++ S   AF+R KF+S+DA   +   VVK + I ERGL P    QP L  
Sbjct: 1   MMSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQ 60

Query: 61  SIIERGWDRLASHPEAVVVPIIREFYANMVDTS--SFVREQTIPFDSTSINQFYGLPNFD 120
           +I++RGW      PE  V+ I+REFYANMV+ S  SFVR + + FD  +IN++Y LPNF+
Sbjct: 61  NIMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFE 120

Query: 121 RDGYTEYASNHFDAHQIIEHLCRPGADWVIKRGK 153
           RD Y  YAS H D HQII  LC+PGA+WVI  G+
Sbjct: 121 RDEYDIYASEHVDVHQIIRELCQPGAEWVINPGE 154

BLAST of Lag0035379 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 1.0e-20
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 0

Query: 63  IERGWDRLASHPEAVVVPIIREFYANMVDTS--SFVREQTIPFDSTSINQFYGLPNFDRD 122
           ++RGW      PE  VV I+REFYANMV+ S  SFVR + + FD  +IN++Y LPNF+RD
Sbjct: 1   MQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERD 60

Query: 123 GYTEYASNHFDAHQIIEHLCRPGADWVIKRGK 153
            Y  YAS H D HQII  LC+PGA+W+I  G+
Sbjct: 61  EYAIYASEHVDVHQIIRELCQPGAEWIINPGE 92

BLAST of Lag0035379 vs. NCBI nr
Match: EOY13933.1 (Uncharacterized protein TCM_032752 [Theobroma cacao])

HSP 1 Score: 101.7 bits (252), Expect = 6.2e-18
Identity = 54/155 (34.84%), Postives = 86/155 (55.48%), Query Frame = 0

Query: 1   MSSKRSRKATASSSFSTAFDRQKFVSRDADVVFHTYVVKRNTIVERGLQPDASSQPDLTH 60
           M+ KRS+ +++ S     FDR KF+S +A   ++T ++ +  I ERG++       ++  
Sbjct: 1   MAPKRSKPSSSGS-----FDRSKFISAEASTRYYTSLINKVPIPERGIEIPILPYKEIND 60

Query: 61  SIIERGWDRLASHPEAVVVPIIREFYANM---VDTSSFVREQTIPFDSTSINQFYGLPNF 120
            I +R W +    P  VVV ++REFYA +   VD  +FVR + +PF S +IN+    PN 
Sbjct: 61  LIRDRYWHQFCHQPNVVVVLVVREFYATVVEHVDGVAFVRGKHVPFHSQAINELLRTPNI 120

Query: 121 DRDGYTEYASNHFDAHQIIEHLCRPGADWVIKRGK 153
           + D Y +Y  +H D ++II  LC  GA W    G+
Sbjct: 121 ENDEYGQYLGDHQDCNEIISTLCIEGAQWKTSHGE 150

BLAST of Lag0035379 vs. NCBI nr
Match: PIN01433.1 (hypothetical protein CDL12_26059 [Handroanthus impetiginosus])

HSP 1 Score: 95.9 bits (237), Expect = 3.4e-16
Identity = 49/154 (31.82%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 3   SKRSRKATASSSFSTAFDRQKFVSRDADVVFHTYVVKRNTIVERGLQPDASSQPD-LTHS 62
           +KR+RK ++ S      D+ +FVS+ A+  +H+ +V +  I ERG +    +  + + H+
Sbjct: 5   NKRARKDSSDSR-----DKGRFVSKSAEERYHSGLVGKVAIAERGFETKGEAYYEHIYHT 64

Query: 63  IIERGWDRLASHPEAVVVPIIREFYANMVDTSS---FVREQTIPFDSTSINQFYGLPNFD 122
           + ER W    + PE+ V+P++REFYAN  +  +    VR + +PFDS +IN+ Y +P  +
Sbjct: 65  VRERKWKTFIASPESGVLPLVREFYANAAEHKNLKCLVRGREVPFDSVTINELYNIPPIE 124

Query: 123 RDGYTEYASNHFDAHQIIEHLCRPGADWVIKRGK 153
            D +  +  N  D  ++   LC  GA W + +G+
Sbjct: 125 LDAFENFCENGIDYEELTRTLCPHGAQWKMTKGE 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0033353.11.5e-3248.70putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]... [more]
KGN46897.15.8e-3248.70hypothetical protein Csa_020731 [Cucumis sativus][more]
XP_008458668.11.0e-2054.35PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo][more]
EOY13933.16.2e-1834.84Uncharacterized protein TCM_032752 [Theobroma cacao][more]
PIN01433.13.4e-1631.82hypothetical protein CDL12_26059 [Handroanthus impetiginosus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035379.1Lag0035379.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:1901564 organonitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
cellular_component GO:0110165 cellular anatomical entity
molecular_function GO:0005488 binding
molecular_function GO:0016301 kinase activity