Homology
BLAST of Lag0035349 vs. NCBI nr
Match:
KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 974.9 bits (2519), Expect = 6.3e-280
Identity = 575/1355 (42.44%), Postives = 766/1355 (56.53%), Query Frame = 0
Query: 2 SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
S +FE+ KF+G GDFSLWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ST
Sbjct: 3 STRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYST 62
Query: 62 MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
++LYLSD VLR VDE E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63 ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENL 122
Query: 122 DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYGRDSLT+ +VLDAL+++
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182
Query: 182 DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
++E + +RK+ E L RGR E K K + RSKSKGK +R+CF CHK GH K
Sbjct: 183 NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242
Query: 242 DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
+C + + N +G NSA I + YDS +
Sbjct: 243 NCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302
Query: 302 -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
C +KG GSV++ D +IL++VRYVP LK
Sbjct: 303 TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362
Query: 362 RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
RNLISLG LD++G + EN GLY L G + A + +
Sbjct: 363 RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422
Query: 422 PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
++LWHKRLAHVSE+GL L +QGLLG K+V LPFCE C +GKS RV+F + H
Sbjct: 423 KVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482
Query: 482 TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
T+GILDY+HSDL K + F F WK V
Sbjct: 483 TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542
Query: 542 ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
ENQT +K+K ++TDN LEF++ F C G +H T+ TPQQNGL+
Sbjct: 543 ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602
Query: 602 ------------------------------------------------------------ 661
Sbjct: 603 RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662
Query: 662 --------------------------------------------------------REEE 721
+E++
Sbjct: 663 AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722
Query: 722 PQPE------------------DPSNVPVQTSE--------------------------- 781
Q D N P SE
Sbjct: 723 KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFI 782
Query: 782 ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
+L NYQLTRDR +R P R+ A D AYAL C D+ +EPLT+
Sbjct: 783 EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842
Query: 842 EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
E+AI S++K QW M+EEL SL KN TW+LV KP KL+ KW+YK+KP G +KPR
Sbjct: 843 EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902
Query: 902 FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
+KARLVAKGYTQ+ G+D+ EIFSPVVR+SSI ++LS+ FD+ +EQMDVTTAFLHGELE
Sbjct: 903 YKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELE 962
Query: 962 EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY +FD FI GF + YD+CVY
Sbjct: 963 EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY 1022
Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1066
K +YLL+YVDDM++ S+D ++I LK QL +EFEMKD+G +ILGM++ R++
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDK 1082
BLAST of Lag0035349 vs. NCBI nr
Match:
KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])
HSP 1 Score: 902.1 bits (2330), Expect = 5.2e-258
Identity = 549/1345 (40.82%), Postives = 730/1345 (54.28%), Query Frame = 0
Query: 2 SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
S +FE+ KF+G GDF+LWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ T
Sbjct: 3 STRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYWT 62
Query: 62 MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
++LYLSD VLR VDE E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63 ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENL 122
Query: 122 DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYG DSLT+ +VLDAL+++
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKTR 182
Query: 182 DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
++E + +RK+ E L RGR E K K + RSKSKGK +R+CF CHK GH K
Sbjct: 183 NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242
Query: 242 DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
+C + + N +G NSA I + DS +
Sbjct: 243 NCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302
Query: 302 -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
C +KG GSV++ D +IL++VRYVP LK
Sbjct: 303 TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362
Query: 362 RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
RNLISLG LD++G + EN GLY L G + A + +
Sbjct: 363 RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422
Query: 422 PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
+ ++LWHKRLAHVSE+GL L +QGLLG K+V LPFCE C +GKS RV+F + H
Sbjct: 423 KVTNMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482
Query: 482 TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
T+GILDYIHSDL K + F F WK V
Sbjct: 483 TKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542
Query: 542 ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
ENQT +K+K ++TDN LEF++ F C G +H T+ TPQQNGL+
Sbjct: 543 ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602
Query: 602 ------------------------------------------------------------ 661
Sbjct: 603 RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662
Query: 662 --------------------------------------------------------REEE 721
+E++
Sbjct: 663 AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722
Query: 722 PQPE------------------DPSNVPVQTSE--------------------------- 781
Q D N P SE
Sbjct: 723 KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFI 782
Query: 782 ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
+L NYQLTRDR +R P R+ A D AYAL C D+ +EPLT+
Sbjct: 783 EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842
Query: 842 EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
E+AI S++K QW M+EEL SL KN TW+LV KP KL+ KW+YK+KP G +KPR
Sbjct: 843 EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902
Query: 902 FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
+KARL+ LS+ FD+ +EQMDVTT FLHGELE
Sbjct: 903 YKARLI----------------------------LSIAVHFDMFIEQMDVTTTFLHGELE 962
Query: 962 EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY FD FI GF + YD+CVY
Sbjct: 963 EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVY 1022
Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1056
K +YLL+YVDDM++ S+D + I LK QL +EFEMKD+G +ILGM++ R+R
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDR 1082
BLAST of Lag0035349 vs. NCBI nr
Match:
RVW58503.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 878.2 bits (2268), Expect = 8.0e-251
Identity = 513/1267 (40.49%), Postives = 721/1267 (56.91%), Query Frame = 0
Query: 2 SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
+AKF++EKF GK DF LWR K++A+LVQ + L ++LP + E ++ E+ E A S
Sbjct: 3 TAKFDVEKFTGKNDFGLWRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAHSA 62
Query: 62 MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
+IL L D+VLR+V + +A E+W KL+S+Y+ KSL N++ K +L+ ++M + +ED+L
Sbjct: 63 IILSLGDTVLREVAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPSMSIEDHL 122
Query: 122 DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
D F KI LD+ NI I DE++AI+LL SL SY +K AI YGRDSLT V L ++
Sbjct: 123 DHFNKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDEVQSILHAR 182
Query: 182 DMETRTQRKET--EALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHL 241
++ + + KE E L +RGR E R K +K RSKSK K+ + CF CHK GH
Sbjct: 183 ELHKQEESKEESGEGLNIRGRSEKR-----EKKGKNSKSRSKSKTKKFK-CFICHKEGHF 242
Query: 242 IKDCRKLQYKNKHQNKKEGQNSANIHESYDSTK--------------CSIKGVGSVKLNL 301
KDC + + EG ++A I + YDS + C I G G+V++
Sbjct: 243 KKDCPDRRQNTVKKTVNEG-DAAVILDGYDSAEVLNVAEVDSGNNKHCKILGTGTVRIKH 302
Query: 302 MDETHKILSSVRYVPDLKRNLISLGTLDKAG-----QP-----------------ENGLY 361
D ++L VRY+P+LKRNLISLG LDK+G +P +NGLY
Sbjct: 303 YDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKGTIKNGLY 362
Query: 362 TLNGASCVDPANNVVPTQPNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCE 421
TL G + + V+ ++ LWH+RL H+S +GL EL+KQG+LG K LPFCE
Sbjct: 363 TLIGQTVTGKVSTVLKEDVGTTK--LWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCE 422
Query: 422 QCTLGKSARVQFNRSMHKTQGILDYIHSDL-----------KSDVFETFSNWKTLVENQT 481
C GK+ RV+F +++H+TQ LDYIHSDL S+ F F WK LVE QT
Sbjct: 423 HCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGASETFLKFKEWKILVETQT 482
Query: 482 NKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS--------------- 541
++K+KK++TDN LEFLS +F ++C K G +H T+ TPQQNGL+
Sbjct: 483 SRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCML 542
Query: 542 ------------------------------------------------------------ 601
Sbjct: 543 SSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTK 602
Query: 602 ------------------------------------------------------------ 661
Sbjct: 603 TDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISIDVTFNEQDMSKQTPAKDVEGL 662
Query: 662 -------REEEPQPEDPSNVPVQTSEE------------NLTNYQLTRDRQRRTIRPPSR 721
E QPE +T++E L +Y L RDRQ+R ++PP R
Sbjct: 663 DQLQFEVEHETLQPEKSKETSSKTTQEEIVHERQNEPTQGLESYNLVRDRQKRQVKPPKR 722
Query: 722 FEQANCNIEIPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNT 781
+ QA + A+AL ++ EP TY++AI S QWV +QEE++SL KN T
Sbjct: 723 YGQA-------EMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNET 782
Query: 782 WALVEKPEEHKLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRY 841
W LV KP++ K+V KW++K K G PR+KARLVAKG++Q+ G+DY EIFSPVV++
Sbjct: 783 WELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKH 842
Query: 842 SSIHVLLSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLY 901
SSI +LL+ VA DLEL+Q+DV TAFLHGEL+E IYM+ P GF K+ VC L KSLY
Sbjct: 843 SSIRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQPPEGFGEGIKDGQVCLLKKSLY 902
Query: 902 GLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISK 961
GLKQSPRQWYK+FD ++ GF +D CVY K +VYLL+YVDDML+A ++
Sbjct: 903 GLKQSPRQWYKRFDKYMLDIGFNPSSHDGCVYFKLTED-SMVYLLLYVDDMLVACKEKRH 962
Query: 962 IERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTV 1021
+E++K LK+EFEMKD+GSA +ILGM + R+R L ++Q+ Y+ K++ R+ + N KTV
Sbjct: 963 LEQVKEMLKAEFEMKDLGSAKRILGMEIERDRSKRVLRLSQNSYISKVLSRFEMNNVKTV 1022
Query: 1022 CVPLAQHFRLSKALSPKSEEERKEMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMS 1066
PL QHFRLS +P++ EE++ ME +PY+S+VGS+MY M CSRPD+A+A+S++SRYMS
Sbjct: 1023 STPLGQHFRLSITQAPETHEEKRFMERIPYASMVGSVMYTMVCSRPDLAYAVSMISRYMS 1082
BLAST of Lag0035349 vs. NCBI nr
Match:
TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 861.3 bits (2224), Expect = 1.0e-245
Identity = 536/1345 (39.85%), Postives = 714/1345 (53.09%), Query Frame = 0
Query: 2 SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
S +FE+ KF+G GDF+LWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ST
Sbjct: 3 STRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYST 62
Query: 62 MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
++LYLSD VLR VDE E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63 ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENL 122
Query: 122 DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYGRDSLT+ +VLDAL+++
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182
Query: 182 DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
++E + +RK+ E L RGR E K K + RSKSKGK +R+CF CHK GH K
Sbjct: 183 NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242
Query: 242 DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
+C + + N +G NSA I + YDS +
Sbjct: 243 NCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302
Query: 302 -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
C +KG GSV++ D +IL++VRYVP LK
Sbjct: 303 TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362
Query: 362 RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
RNLISLG LD++G + EN GLY L G + A + +
Sbjct: 363 RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422
Query: 422 PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
++LWHKRLAHVSE+GL L +QGLLG K+V LPFCE C +GKS RV+F + H
Sbjct: 423 KVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482
Query: 482 TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
T+GILDY+HSDL K + F F WK V
Sbjct: 483 TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542
Query: 542 ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
ENQT +K+K ++TDN LEF++ F C G +H T+ TPQQNGL+
Sbjct: 543 ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602
Query: 602 ------------------------------------------------------------ 661
Sbjct: 603 RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662
Query: 662 --------------------------------------------------------REEE 721
+E++
Sbjct: 663 AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722
Query: 722 PQPE------------------DPSNVPVQTSE--------------------------- 781
Q D N P SE
Sbjct: 723 KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFI 782
Query: 782 ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
+L NYQLTRDR +R P R+ A D AYAL C D+ +EPLT+
Sbjct: 783 EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842
Query: 842 EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
E+AI S++K QW M+EEL SL KN TW+LV KP KL+ KW+YK+KP G +KPR
Sbjct: 843 EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902
Query: 902 FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
+KARLVAKGYTQ+ G+D+ EIFSPVVR+SSI ++LS+ FD+ +EQMDVTTAFLHGELE
Sbjct: 903 YKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELE 962
Query: 962 EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY +FD FI GF + YD+CVY
Sbjct: 963 EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY 1022
Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1056
K +YLL+YVDDM++ S+D ++I LK QL +EFEMKD+G +ILGM++ R++
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDK 1082
BLAST of Lag0035349 vs. NCBI nr
Match:
KAF5775409.1 (putative RNA-directed DNA polymerase [Helianthus annuus])
HSP 1 Score: 837.4 bits (2162), Expect = 1.6e-238
Identity = 506/1325 (38.19%), Postives = 717/1325 (54.11%), Query Frame = 0
Query: 1 MSAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFS 60
+S KFELEKFDG+ DFSLWR K++A+LV V L+ + LP LS ++KE+ E A S
Sbjct: 2 VSTKFELEKFDGRNDFSLWRVKMRALLVHNGVVDALKGEDRLPNELSAKEKKEILEKAHS 61
Query: 61 TMILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDN 120
+IL L D VLR+V + +A +W KL+++Y+ KSL N++ LK+RL+ ++M+S K LE++
Sbjct: 62 AIILSLGDRVLREVSKEASAAGVWAKLETLYMTKSLANRLYLKKRLYTFKMESGKSLEEH 121
Query: 121 LDEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRS 180
D+F K+ LD+ NI ++DE++AI+ L SL SY+ + Y R++L++ VL AL S
Sbjct: 122 TDDFNKLVLDLENIEVTLEDEDKAILFLTSLPSSYESFVDTLMYARETLSMEEVLAALNS 181
Query: 181 KDMETRTQRKE--TEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGH 240
K+++ +T KE ++ L VRGRPENR + + RSKSK K R+CF C+ H
Sbjct: 182 KELKKKTVDKEEGSDGLYVRGRPENRSS----KSFKGSSSRSKSKTKFKRKCFVCNSEKH 241
Query: 241 LIKDCRKLQYKNKHQNKKEGQNSANIHE----SYDST----------------------- 300
L KDC + + K + + S ++ E YDS
Sbjct: 242 LKKDCPEWKRKKTESSSSKSYTSHSVQEDSSDGYDSADVLSVTWDEVKKHWVMDSGCSFH 301
Query: 301 -------------------------KCSIKGVGSVKLNLMDETHKILSSVRYVPDLKRNL 360
C I G+G++ + + T +L +VRY+P LKR+L
Sbjct: 302 MTPRREYFKDLKMYSLGTVQLGDDRPCQILGIGTIVFKMNNGTEVVLKNVRYIPSLKRSL 361
Query: 361 ISLGTLDKAG-----------------------QPENGLYTLNGASCVDPANNVVPTQPN 420
+SLGT ++ G + +N +Y L+G+ + + V+ +
Sbjct: 362 LSLGTFERDGYHVLLKDGKAKVIKGSLVVLTGTRKDNNIYLLDGSVASNEVSAVI-SDKE 421
Query: 421 NSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHKTQ 480
N L WH+RL HVS +GL EL+KQ ++ + S + FCE C +GK RV+F + H T+
Sbjct: 422 NETTLKWHRRLGHVSSQGLMELKKQQVIKELTSCDVGFCENCIMGKQKRVKFMKGKHNTR 481
Query: 481 GILDYIHSDL---------------------------------KSDVFETFSNWKTLVEN 540
GILDY+HSDL KS+ F+ F WK +EN
Sbjct: 482 GILDYVHSDLWGPARVESLGGARYFMTVIDDFSRRVWVFILKHKSEAFKKFKEWKIYIEN 541
Query: 541 QTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLSRE----------- 600
QT +KIKK++TDN LE+ ++ F+ +C +SG +HLTIP TPQQNGL+
Sbjct: 542 QTERKIKKLRTDNGLEYCNKEFEELCAESGIGRHLTIPGTPQQNGLAERMNRTLLERVRC 601
Query: 601 ------------------------------------------------------------ 660
Sbjct: 602 MRLSAGLPKTFWAEAVKTAAYLINMCPSRAINMKSPMEVWTGEPPNYEDLRVFGTLAFAH 661
Query: 661 --------------------------------EEP------------------------- 720
E P
Sbjct: 662 TSQDKLESRAIKCIFLGYQEREKGYRLWKIEGESPRIIKSRNVEFQEKIYYKDVMNGKSS 721
Query: 721 ------------------------QPEDPSNVPVQTSEENLTNYQLTRDRQRRTIRPPSR 780
Q E+ V +T+ E +Y L+RDR+RR + P R
Sbjct: 722 KSVNTSQEDVQIEVETSEIVSSDVQNEESPTVETETTSEQSGDYWLSRDRERRNVIKPLR 781
Query: 781 FEQANCNIEIPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNT 840
F Q N N+ +A A I ++ ++E LTY QAI S+ K +W MQEE++SL+KN T
Sbjct: 782 FRQ-NTNV-----SAVAFITAENECVNEHLTYYQAISSKEKEEWHKAMQEEMSSLIKNKT 841
Query: 841 WALVEKPEEHKLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRY 900
W LV+KP++ K+V CKW+YK+K + G RFKARLVAKG+TQ+ G+DYTEIFSPVV++
Sbjct: 842 WELVKKPKDQKVVACKWIYKIKEGIPGVENRRFKARLVAKGFTQKEGVDYTEIFSPVVKH 901
Query: 901 SSIHVLLSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLY 960
+SI +LL++ A DLELEQ+DV TAFLHG L+E+IYM QP GF G E VC L +SLY
Sbjct: 902 TSIRILLAITAALDLELEQLDVKTAFLHGYLDEKIYMAQPLGFVEEGSEEKVCLLKRSLY 961
Query: 961 GLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISK 1020
GLKQSPRQWYK+FD F+ S GF + YDSCVY + VYLL+YVDDMLIA + +
Sbjct: 962 GLKQSPRQWYKRFDEFMTSSGFARSSYDSCVYYREYCPGNYVYLLLYVDDMLIACKHKEQ 1021
Query: 1021 IERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTV 1063
I+ +K LKSEFEMK++G A +ILGM + R+R L + QS Y++KI++ Y +E K V
Sbjct: 1022 IKEVKELLKSEFEMKELGDAKKILGMEICRDRQLKKLKLTQSAYVKKILENYRMEGCKAV 1081
BLAST of Lag0035349 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 647.1 bits (1668), Expect = 3.9e-184
Identity = 436/1321 (33.01%), Postives = 642/1321 (48.60%), Query Frame = 0
Query: 4 KFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFSTMI 63
K+E+ KF+G FS W+++++ +L+Q + K+L+ P+ + ++DE A S +
Sbjct: 5 KYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIR 64
Query: 64 LYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNLDE 123
L+LSD V+ + + + A IW +L+S+Y++K+LTNK+ LK++L+ M +L+
Sbjct: 65 LHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNV 124
Query: 124 FVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSKDM 183
F + + N+G KI++E++AI+LLNSL SY + I +G+ ++ L+ V AL +
Sbjct: 125 FNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEK 184
Query: 184 ETRTQRKETEALTVRGR----PENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHL 243
+ + +AL GR + N + R ++K+RSKS+ R C+ C++ GH
Sbjct: 185 MRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSR---VRNCYNCNQPGHF 244
Query: 244 IKDC-RKLQYKNKHQNKKEGQNSANIHESYDST--------KC----------------- 303
+DC + K + +K N+A + ++ D+ +C
Sbjct: 245 KRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAAS 304
Query: 304 -----------------------------SIKGVGSVKLNLMDETHKILSSVRYVPDLKR 363
I G+G + + +L VR+VPDL+
Sbjct: 305 HHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRM 364
Query: 364 NLISLGTLDK----------------------AGQPENGLYTLNGASCVDPANNVVPTQP 423
NLIS LD+ G LY N C N
Sbjct: 365 NLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELN----AAQ 424
Query: 424 NNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHKT 483
+ LWHKR+ H+SEKGL L K+ L+ K ++ C+ C GK RV F S +
Sbjct: 425 DEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERK 484
Query: 484 QGILDYIHSDL---------------------------------KSDVFETFSNWKTLVE 543
ILD ++SD+ K VF+ F + LVE
Sbjct: 485 LNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVE 544
Query: 544 NQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS------------ 603
+T +K+K++++DN E+ S F+ C+ G + T+P TPQ NG++
Sbjct: 545 RETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVR 604
Query: 604 ------------------------------------------------------------ 663
Sbjct: 605 SMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFA 664
Query: 664 ---REEEPQPED------------------------------------------------ 723
+E+ + +D
Sbjct: 665 HVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSE 724
Query: 724 -------PSNVPVQTSEENLTNYQLTRD------------------------------RQ 783
P+ V + ++ N T+ + T D +
Sbjct: 725 KVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQG 784
Query: 784 RRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEE 843
+P R E+ S Y LI DD EP + ++ + K+Q + MQEE
Sbjct: 785 EEQHQPLRRSERPRVESRRYPSTEYVLISDD----REPESLKEVLSHPEKNQLMKAMQEE 844
Query: 844 LNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENK-PRFKARLVAKGYTQQYGIDY 903
+ SL KN T+ LVE P+ + + CKW++KLK G+ K R+KARLV KG+ Q+ GID+
Sbjct: 845 MESLQKNGTYKLVELPKGKRPLKCKWVFKLKKD--GDCKLVRYKARLVVKGFEQKKGIDF 904
Query: 904 TEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKEN 963
EIFSPVV+ +SI +LSL A DLE+EQ+DV TAFLHG+LEEEIYM QP GFEV GK++
Sbjct: 905 DEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKH 964
Query: 964 SVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDD 1023
VC+L KSLYGLKQ+PRQWY KFD F++S ++K D CVY K + + LL+YVDD
Sbjct: 965 MVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDD 1024
Query: 1024 MLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVK 1050
MLI +D I +LK L F+MKD+G A QILGM +VR R + L ++Q Y+E++++
Sbjct: 1025 MLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLE 1084
BLAST of Lag0035349 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 406.8 bits (1044), Expect = 8.9e-112
Identity = 360/1420 (25.35%), Postives = 609/1420 (42.89%), Query Frame = 0
Query: 3 AKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILE--KPEDLPEPLSEAKRKEMDEIAFS 62
AK ++ FDG+ +++W+ +++A+L + V K+++ P ++ + +A+R A S
Sbjct: 4 AKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAER-----CAKS 63
Query: 63 TMILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDN 122
T+I YLSDS L A +I + LD++Y KSL +++ L++RL ++ S L +
Sbjct: 64 TIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSH 123
Query: 123 LDEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIK-YGRDSLTLRLVLDALR 182
F ++ ++ G KI++ ++ LL +L Y I AI+ ++LTL V + L
Sbjct: 124 FHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLL 183
Query: 183 SKDMETRTQRKETEALTVRGRPENRLNTPK----INKRDQNKHRSKSKGKETRECFYCHK 242
++++ + +T + N NT K N+ + K K K +C +C +
Sbjct: 184 DQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGR 243
Query: 243 SGHLIKDC----RKLQYKNKHQNKKEGQNSAN---------IHESYDSTKCSIKGVGSVK 302
GH+ KDC R L KNK +N+K+ Q + + ++ + C
Sbjct: 244 EGHIKKDCFHYKRILNNKNK-ENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGAS 303
Query: 303 LNLMDETHKILSSVRYVPDLK--------------------------------------R 362
+L+++ SV VP LK
Sbjct: 304 DHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAG 363
Query: 363 NLISLGTLDKAGQ-----------PENGLYTLNGASCVD-------PANNVVPTQPNNSE 422
NL+S+ L +AG +NGL + + ++ A ++ NN
Sbjct: 364 NLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPVINFQAYSINAKHKNNFR 423
Query: 423 ALLWHKRLAHVSEKGLAELQKQGL-----LGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 482
LWH+R H+S+ L E++++ + L +S CE C GK AR+ F + K
Sbjct: 424 --LWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDK 483
Query: 483 T--QGILDYIHSDL---------------------------------KSDVFETFSNWKT 542
T + L +HSD+ KSDVF F ++
Sbjct: 484 THIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVA 543
Query: 543 LVENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLSRE------- 602
E N K+ + DN E+LS + C K G HLT+P+TPQ NG+S
Sbjct: 544 KSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITE 603
Query: 603 ------------------------------------------------------------ 662
Sbjct: 604 KARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFG 663
Query: 663 ------------------------------------------------------------ 722
Sbjct: 664 ATVYVHIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAV 723
Query: 723 -------EEPQPEDPSNVP------VQTSEEN----LTNYQLTRDRQ-----------RR 782
++ + + N P +QT N N Q +D + R+
Sbjct: 724 KFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRK 783
Query: 783 TIRPPSRFEQANCN---------------------------------------------- 842
I+ E C+
Sbjct: 784 IIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETA 843
Query: 843 ----------------IEIPDSAAYAL-------ICDDDNEISE------------PLTY 902
IEI + + L ++DN +++ P ++
Sbjct: 844 EHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSF 903
Query: 903 EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 962
++ ++KS W + ELN+ NNTW + ++PE +VD +W++ +K + G N R
Sbjct: 904 DEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELG-NPIR 963
Query: 963 FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 1022
+KARLVA+G+TQ+Y IDY E F+PV R SS +LSLV Q++L++ QMDV TAFL+G L+
Sbjct: 964 YKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLK 1023
Query: 1023 EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1068
EEIYMR P G + ++VC+L K++YGLKQ+ R W++ F+ ++ C FV D C+Y
Sbjct: 1024 EEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIY 1083
BLAST of Lag0035349 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 300.4 bits (768), Expect = 9.0e-80
Identity = 183/510 (35.88%), Postives = 286/510 (56.08%), Query Frame = 0
Query: 545 SEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEH-KLVDCKWLYKLKPSL 604
SEP T QA+K E +W M E+N+ + N+TW LV P H +V C+W++ K +
Sbjct: 954 SEPRTAIQALKDE---RWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNS 1013
Query: 605 KGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTA 664
G + R+KARLVAKGY Q+ G+DY E FSPV++ +SI ++L + + Q+DV A
Sbjct: 1014 DG-SLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNA 1073
Query: 665 FLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKR 724
FL G L +++YM QPPGF + + N VC+L K+LYGLKQ+PR WY + ++ + GFV
Sbjct: 1074 FLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNS 1133
Query: 725 KYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILG 784
D+ +++ + +VY+L+YVDD+LI D + + L F +KD LG
Sbjct: 1134 VSDTSLFV-LQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLG 1193
Query: 785 MNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQHFRLSKALSPKSEEERKEM 844
+ R L ++Q Y+ ++ R + AK V P+A +LS K + +
Sbjct: 1194 IE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE-- 1253
Query: 845 EHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKGTTNYGL 904
Y +VGSL Y + +RPDI++A++ +S++M + H +A+K I+RY+ GT N+G+
Sbjct: 1254 ----YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGI 1313
Query: 905 IYSRGSLKDSCLVGYSDADFAADLDKRRSTSGYIFTLFQNTVSWRSHLQSVTALSTTESE 964
+G+ L YSDAD+A D D ST+GYI L + +SW S Q S+TE+E
Sbjct: 1314 FLKKGNTLS--LHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAE 1373
Query: 965 SISLVEAVNEGTWLTGLVFEL-LGDTNQLSVFSDSQSAIALSKNPQYHDRSKHIDTRYHY 1024
S+ +E W+ L+ EL + T ++ D+ A L NP +H R KHI YH+
Sbjct: 1374 YRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHF 1433
Query: 1025 LREKTMNEEIKLGKVASANNPTDMLTKPLT 1053
+R + + +++ V++ + D LTKPL+
Sbjct: 1434 IRNQVQSGALRVVHVSTHDQLADTLTKPLS 1447
BLAST of Lag0035349 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 286.2 bits (731), Expect = 1.8e-75
Identity = 192/587 (32.71%), Postives = 310/587 (52.81%), Query Frame = 0
Query: 468 PNTPQQNGLSREEEPQPEDPSNVPVQTSEENLTNYQLTRDRQRRTIRPPSRFEQANCNIE 527
PN+P + S P P P+ +Q + + N R + IR P++
Sbjct: 876 PNSPSSSSTSTPPLP-PVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQ--------- 935
Query: 528 IPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEE 587
S A +L + SEP T QA+K + +W M E+N+ + N+TW LV P
Sbjct: 936 -KYSYATSLAAN-----SEPRTAIQAMKDD---RWRQAMGSEINAQIGNHTWDLVPPPPP 995
Query: 588 H-KLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLS 647
+V C+W++ K + G + R+KARLVAKGY Q+ G+DY E FSPV++ +SI ++L
Sbjct: 996 SVTIVGCRWIFTKKFNSDG-SLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLG 1055
Query: 648 LVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQ 707
+ + Q+DV AFL G L +E+YM QPPGF + + + VCRL K++YGLKQ+PR
Sbjct: 1056 VAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRA 1115
Query: 708 WYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQL 767
WY + ++ + GFV D+ +++ ++Y+L+YVDD+LI D ++ L
Sbjct: 1116 WYVELRTYLLTVGFVNSISDTSLFVLQRGR-SIIYMLVYVDDILITGNDTVLLKHTLDAL 1175
Query: 768 KSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQHF 827
F +K+ LG+ R L ++Q Y ++ R + AK V P+A
Sbjct: 1176 SQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSP 1235
Query: 828 RLSKALSPKSEEERKEMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMSDLGKPHWE 887
+L+ K + + Y +VGSL Y + +RPD+++A++ +S+YM HW
Sbjct: 1236 KLTLHSGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWN 1295
Query: 888 AVKWIIRYIKGTTNYGLIYSRGSLKDSCLVGYSDADFAADLDKRRSTSGYIFTLFQNTVS 947
A+K ++RY+ GT ++G+ +G+ L YSDAD+A D D ST+GYI L + +S
Sbjct: 1296 ALKRVLRYLAGTPDHGIFLKKGNTLS--LHAYSDADWAGDTDDYVSTNGYIVYLGHHPIS 1355
Query: 948 WRSHLQSVTALSTTESESISLVEAVNEGTWLTGLVFEL-LGDTNQLSVFSDSQSAIALSK 1007
W S Q S+TE+E S+ +E W+ L+ EL + ++ ++ D+ A L
Sbjct: 1356 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1415
Query: 1008 NPQYHDRSKHIDTRYHYLREKTMNEEIKLGKVASANNPTDMLTKPLT 1053
NP +H R KHI YH++R + + +++ V++ + D LTKPL+
Sbjct: 1416 NPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLS 1430
BLAST of Lag0035349 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 155.2 bits (391), Expect = 4.7e-36
Identity = 98/317 (30.91%), Postives = 162/317 (51.10%), Query Frame = 0
Query: 658 MDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQS 717
MDV TAFL+ ++E IY++QPPGF + V L +YGLKQ+P W + + ++
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 718 CGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGS 777
GF + + + +Y + + +Y+ +YVDD+L+A+ +R+K +L + MKD+G
Sbjct: 61 IGFCRHEGEHGLYFRSTSD-GPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 120
Query: 778 AFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQHFRLSKALSPKSE 837
+ LG+N + G + ++ Y+ K + K PL L + SP +
Sbjct: 121 VDKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLK 180
Query: 838 EERKEMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKG 897
+ PY S+VG L++ RPDI++ +S++SR++ + H E+ + ++RY+
Sbjct: 181 ------DITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYT 240
Query: 898 TTNYGLIYSRGSLKDSCLVGYSDADFAADLDKRRSTSGYIFTLFQNTVSWRS-HLQSVTA 957
T + L Y GS L Y DA A D ST GY+ L V+W S L+ V
Sbjct: 241 TRSMCLKYRSGS--QLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIP 300
Query: 958 LSTTESESISLVEAVNE 974
+ +TE+E I+ E V E
Sbjct: 301 VPSTEAEYITASETVME 307
BLAST of Lag0035349 vs. ExPASy TrEMBL
Match:
A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)
HSP 1 Score: 974.9 bits (2519), Expect = 3.0e-280
Identity = 575/1355 (42.44%), Postives = 766/1355 (56.53%), Query Frame = 0
Query: 2 SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
S +FE+ KF+G GDFSLWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ST
Sbjct: 3 STRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYST 62
Query: 62 MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
++LYLSD VLR VDE E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63 ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENL 122
Query: 122 DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYGRDSLT+ +VLDAL+++
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182
Query: 182 DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
++E + +RK+ E L RGR E K K + RSKSKGK +R+CF CHK GH K
Sbjct: 183 NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242
Query: 242 DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
+C + + N +G NSA I + YDS +
Sbjct: 243 NCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302
Query: 302 -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
C +KG GSV++ D +IL++VRYVP LK
Sbjct: 303 TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362
Query: 362 RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
RNLISLG LD++G + EN GLY L G + A + +
Sbjct: 363 RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422
Query: 422 PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
++LWHKRLAHVSE+GL L +QGLLG K+V LPFCE C +GKS RV+F + H
Sbjct: 423 KVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482
Query: 482 TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
T+GILDY+HSDL K + F F WK V
Sbjct: 483 TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542
Query: 542 ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
ENQT +K+K ++TDN LEF++ F C G +H T+ TPQQNGL+
Sbjct: 543 ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602
Query: 602 ------------------------------------------------------------ 661
Sbjct: 603 RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662
Query: 662 --------------------------------------------------------REEE 721
+E++
Sbjct: 663 AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722
Query: 722 PQPE------------------DPSNVPVQTSE--------------------------- 781
Q D N P SE
Sbjct: 723 KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFI 782
Query: 782 ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
+L NYQLTRDR +R P R+ A D AYAL C D+ +EPLT+
Sbjct: 783 EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842
Query: 842 EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
E+AI S++K QW M+EEL SL KN TW+LV KP KL+ KW+YK+KP G +KPR
Sbjct: 843 EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902
Query: 902 FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
+KARLVAKGYTQ+ G+D+ EIFSPVVR+SSI ++LS+ FD+ +EQMDVTTAFLHGELE
Sbjct: 903 YKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELE 962
Query: 962 EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY +FD FI GF + YD+CVY
Sbjct: 963 EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY 1022
Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1066
K +YLL+YVDDM++ S+D ++I LK QL +EFEMKD+G +ILGM++ R++
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDK 1082
BLAST of Lag0035349 vs. ExPASy TrEMBL
Match:
A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)
HSP 1 Score: 902.1 bits (2330), Expect = 2.5e-258
Identity = 549/1345 (40.82%), Postives = 730/1345 (54.28%), Query Frame = 0
Query: 2 SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
S +FE+ KF+G GDF+LWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ T
Sbjct: 3 STRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYWT 62
Query: 62 MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
++LYLSD VLR VDE E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63 ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENL 122
Query: 122 DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYG DSLT+ +VLDAL+++
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKTR 182
Query: 182 DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
++E + +RK+ E L RGR E K K + RSKSKGK +R+CF CHK GH K
Sbjct: 183 NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242
Query: 242 DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
+C + + N +G NSA I + DS +
Sbjct: 243 NCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302
Query: 302 -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
C +KG GSV++ D +IL++VRYVP LK
Sbjct: 303 TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362
Query: 362 RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
RNLISLG LD++G + EN GLY L G + A + +
Sbjct: 363 RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422
Query: 422 PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
+ ++LWHKRLAHVSE+GL L +QGLLG K+V LPFCE C +GKS RV+F + H
Sbjct: 423 KVTNMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482
Query: 482 TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
T+GILDYIHSDL K + F F WK V
Sbjct: 483 TKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542
Query: 542 ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
ENQT +K+K ++TDN LEF++ F C G +H T+ TPQQNGL+
Sbjct: 543 ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602
Query: 602 ------------------------------------------------------------ 661
Sbjct: 603 RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662
Query: 662 --------------------------------------------------------REEE 721
+E++
Sbjct: 663 AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722
Query: 722 PQPE------------------DPSNVPVQTSE--------------------------- 781
Q D N P SE
Sbjct: 723 KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFI 782
Query: 782 ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
+L NYQLTRDR +R P R+ A D AYAL C D+ +EPLT+
Sbjct: 783 EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842
Query: 842 EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
E+AI S++K QW M+EEL SL KN TW+LV KP KL+ KW+YK+KP G +KPR
Sbjct: 843 EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902
Query: 902 FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
+KARL+ LS+ FD+ +EQMDVTT FLHGELE
Sbjct: 903 YKARLI----------------------------LSIAVHFDMFIEQMDVTTTFLHGELE 962
Query: 962 EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY FD FI GF + YD+CVY
Sbjct: 963 EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVY 1022
Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1056
K +YLL+YVDDM++ S+D + I LK QL +EFEMKD+G +ILGM++ R+R
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDR 1082
BLAST of Lag0035349 vs. ExPASy TrEMBL
Match:
A0A438FEW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2571 PE=4 SV=1)
HSP 1 Score: 878.2 bits (2268), Expect = 3.9e-251
Identity = 513/1267 (40.49%), Postives = 721/1267 (56.91%), Query Frame = 0
Query: 2 SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
+AKF++EKF GK DF LWR K++A+LVQ + L ++LP + E ++ E+ E A S
Sbjct: 3 TAKFDVEKFTGKNDFGLWRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAHSA 62
Query: 62 MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
+IL L D+VLR+V + +A E+W KL+S+Y+ KSL N++ K +L+ ++M + +ED+L
Sbjct: 63 IILSLGDTVLREVAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPSMSIEDHL 122
Query: 122 DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
D F KI LD+ NI I DE++AI+LL SL SY +K AI YGRDSLT V L ++
Sbjct: 123 DHFNKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDEVQSILHAR 182
Query: 182 DMETRTQRKET--EALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHL 241
++ + + KE E L +RGR E R K +K RSKSK K+ + CF CHK GH
Sbjct: 183 ELHKQEESKEESGEGLNIRGRSEKR-----EKKGKNSKSRSKSKTKKFK-CFICHKEGHF 242
Query: 242 IKDCRKLQYKNKHQNKKEGQNSANIHESYDSTK--------------CSIKGVGSVKLNL 301
KDC + + EG ++A I + YDS + C I G G+V++
Sbjct: 243 KKDCPDRRQNTVKKTVNEG-DAAVILDGYDSAEVLNVAEVDSGNNKHCKILGTGTVRIKH 302
Query: 302 MDETHKILSSVRYVPDLKRNLISLGTLDKAG-----QP-----------------ENGLY 361
D ++L VRY+P+LKRNLISLG LDK+G +P +NGLY
Sbjct: 303 YDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKGTIKNGLY 362
Query: 362 TLNGASCVDPANNVVPTQPNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCE 421
TL G + + V+ ++ LWH+RL H+S +GL EL+KQG+LG K LPFCE
Sbjct: 363 TLIGQTVTGKVSTVLKEDVGTTK--LWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCE 422
Query: 422 QCTLGKSARVQFNRSMHKTQGILDYIHSDL-----------KSDVFETFSNWKTLVENQT 481
C GK+ RV+F +++H+TQ LDYIHSDL S+ F F WK LVE QT
Sbjct: 423 HCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGASETFLKFKEWKILVETQT 482
Query: 482 NKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS--------------- 541
++K+KK++TDN LEFLS +F ++C K G +H T+ TPQQNGL+
Sbjct: 483 SRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCML 542
Query: 542 ------------------------------------------------------------ 601
Sbjct: 543 SSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTK 602
Query: 602 ------------------------------------------------------------ 661
Sbjct: 603 TDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISIDVTFNEQDMSKQTPAKDVEGL 662
Query: 662 -------REEEPQPEDPSNVPVQTSEE------------NLTNYQLTRDRQRRTIRPPSR 721
E QPE +T++E L +Y L RDRQ+R ++PP R
Sbjct: 663 DQLQFEVEHETLQPEKSKETSSKTTQEEIVHERQNEPTQGLESYNLVRDRQKRQVKPPKR 722
Query: 722 FEQANCNIEIPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNT 781
+ QA + A+AL ++ EP TY++AI S QWV +QEE++SL KN T
Sbjct: 723 YGQA-------EMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNET 782
Query: 782 WALVEKPEEHKLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRY 841
W LV KP++ K+V KW++K K G PR+KARLVAKG++Q+ G+DY EIFSPVV++
Sbjct: 783 WELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKH 842
Query: 842 SSIHVLLSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLY 901
SSI +LL+ VA DLEL+Q+DV TAFLHGEL+E IYM+ P GF K+ VC L KSLY
Sbjct: 843 SSIRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQPPEGFGEGIKDGQVCLLKKSLY 902
Query: 902 GLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISK 961
GLKQSPRQWYK+FD ++ GF +D CVY K +VYLL+YVDDML+A ++
Sbjct: 903 GLKQSPRQWYKRFDKYMLDIGFNPSSHDGCVYFKLTED-SMVYLLLYVDDMLVACKEKRH 962
Query: 962 IERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTV 1021
+E++K LK+EFEMKD+GSA +ILGM + R+R L ++Q+ Y+ K++ R+ + N KTV
Sbjct: 963 LEQVKEMLKAEFEMKDLGSAKRILGMEIERDRSKRVLRLSQNSYISKVLSRFEMNNVKTV 1022
Query: 1022 CVPLAQHFRLSKALSPKSEEERKEMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMS 1066
PL QHFRLS +P++ EE++ ME +PY+S+VGS+MY M CSRPD+A+A+S++SRYMS
Sbjct: 1023 STPLGQHFRLSITQAPETHEEKRFMERIPYASMVGSVMYTMVCSRPDLAYAVSMISRYMS 1082
BLAST of Lag0035349 vs. ExPASy TrEMBL
Match:
A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)
HSP 1 Score: 861.3 bits (2224), Expect = 4.9e-246
Identity = 536/1345 (39.85%), Postives = 714/1345 (53.09%), Query Frame = 0
Query: 2 SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
S +FE+ KF+G GDF+LWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ST
Sbjct: 3 STRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYST 62
Query: 62 MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
++LYLSD VLR VDE E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63 ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENL 122
Query: 122 DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYGRDSLT+ +VLDAL+++
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182
Query: 182 DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
++E + +RK+ E L RGR E K K + RSKSKGK +R+CF CHK GH K
Sbjct: 183 NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242
Query: 242 DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
+C + + N +G NSA I + YDS +
Sbjct: 243 NCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302
Query: 302 -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
C +KG GSV++ D +IL++VRYVP LK
Sbjct: 303 TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362
Query: 362 RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
RNLISLG LD++G + EN GLY L G + A + +
Sbjct: 363 RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422
Query: 422 PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
++LWHKRLAHVSE+GL L +QGLLG K+V LPFCE C +GKS RV+F + H
Sbjct: 423 KVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482
Query: 482 TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
T+GILDY+HSDL K + F F WK V
Sbjct: 483 TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542
Query: 542 ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
ENQT +K+K ++TDN LEF++ F C G +H T+ TPQQNGL+
Sbjct: 543 ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602
Query: 602 ------------------------------------------------------------ 661
Sbjct: 603 RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662
Query: 662 --------------------------------------------------------REEE 721
+E++
Sbjct: 663 AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722
Query: 722 PQPE------------------DPSNVPVQTSE--------------------------- 781
Q D N P SE
Sbjct: 723 KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFI 782
Query: 782 ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
+L NYQLTRDR +R P R+ A D AYAL C D+ +EPLT+
Sbjct: 783 EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842
Query: 842 EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
E+AI S++K QW M+EEL SL KN TW+LV KP KL+ KW+YK+KP G +KPR
Sbjct: 843 EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902
Query: 902 FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
+KARLVAKGYTQ+ G+D+ EIFSPVVR+SSI ++LS+ FD+ +EQMDVTTAFLHGELE
Sbjct: 903 YKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELE 962
Query: 962 EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY +FD FI GF + YD+CVY
Sbjct: 963 EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY 1022
Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1056
K +YLL+YVDDM++ S+D ++I LK QL +EFEMKD+G +ILGM++ R++
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDK 1082
BLAST of Lag0035349 vs. ExPASy TrEMBL
Match:
A0A2P5YYC3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00016 PE=4 SV=1)
HSP 1 Score: 830.9 bits (2145), Expect = 7.1e-237
Identity = 505/1320 (38.26%), Postives = 704/1320 (53.33%), Query Frame = 0
Query: 2 SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
S K+++EKF GK FSLWR K++A+LVQ + K L + LP LSE ++ +M E A S
Sbjct: 506 STKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQKDDMLERAHSA 565
Query: 62 MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
++L L D VLR+V + A +W +L+S Y+ KSLTN++ LK+RL+ +M+ P+ +L
Sbjct: 566 ILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTPVSQHL 625
Query: 122 DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
D+F I +D+ NI KIDDE+QAII+L SL SY+ + YGRD LTL V +AL S
Sbjct: 626 DKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTLEEVKNALSSS 685
Query: 182 DMETR-----TQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKS 241
++ + + E E L RGR K +K +S+ K+ +C+YC K
Sbjct: 686 ELRKKITGKVVENNEGEGLVARGR-------SKAKGGSSSKSHPRSQSKKRIQCYYCKKY 745
Query: 242 GHLIKDCRKLQYKNKHQNKKEGQ-NSANIHESYDST------------------------ 301
GH+ DC K + K++ Q ++ + N A+ S D+
Sbjct: 746 GHMKVDCPKRKEKSESQEQQNDRANVADADSSSDAEIVLAVSDSYAGGRWILDTGATFHI 805
Query: 302 -----------------------KCSIKGVGSVKLNLMDETHKILSSVRYVPDLKRNLIS 361
C + G+G+V++ + D + L+ VR++P++K+NLIS
Sbjct: 806 STSKDAFSTYEKHSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLIS 865
Query: 362 LGTLDK----------------------AGQPENGLYTLNGASCVDPANNVVPTQPNNSE 421
L TLDK G E GLY L+G+S A ++
Sbjct: 866 LSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDT 925
Query: 422 ALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHKTQGIL 481
LWH RL H+SE+GL+ L K+GLL + L FCE C GK RV+F+ +HKT+G +
Sbjct: 926 TKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTV 985
Query: 482 DYIHSDL---------------------------------KSDVFETFSNWKTLVENQTN 541
DY HSDL K +V F +K L+ENQT
Sbjct: 986 DYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQTG 1045
Query: 542 KKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLSRE-------------- 601
KKIK+ +TDN LEF S F C G +H T+ TPQQNG++
Sbjct: 1046 KKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMRS 1105
Query: 602 ------------------------------EEPQ------PEDPSNV------------- 661
+ P+ P D S +
Sbjct: 1106 NAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGLRVFGCPAYAHVNE 1165
Query: 662 --------------------------PVQTSEENLTNYQLTRDRQ---RRTIRPPSRFE- 721
P S + + + +T D R T + E
Sbjct: 1166 GKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEES 1225
Query: 722 ----------QANCNIEIPDSAAYALICDDDNEIS------------------------- 781
Q C ++ P + DD E+
Sbjct: 1226 DRMGDHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDEDESPQEKPYSIATGRTKRQIK 1285
Query: 782 ---------------------EPLTYEQAIKSENKSQWVTTMQEELNSLMKNNTWALVEK 841
EP +Y +A+ + +QW M EE+ SL KN+TW LV+
Sbjct: 1286 PNPRYANLVSFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKP 1345
Query: 842 PEEHKLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVL 901
P K+V CKW++K K + G RFKARLVAKG+TQ+ GIDY E+FSPVV++SSI VL
Sbjct: 1346 PSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVL 1405
Query: 902 LSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSP 961
L++VA+ DLELEQ+DV TAFLHGELEE IYMRQP GF V GKE+ VC L KSLYGLKQSP
Sbjct: 1406 LAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSP 1465
Query: 962 RQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKL 1021
RQWYK+FD F+ G+ + YD+CVY + + +YLL+YVDDMLIAS+++S+I +LK
Sbjct: 1466 RQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMSEINKLKS 1525
Query: 1022 QLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQ 1065
QL EFEMKD+G+A +ILGM++ R+R AG L ++Q Y+EK+++R+ ++ AKTV PLA
Sbjct: 1526 QLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGMDKAKTVSTPLAP 1585
BLAST of Lag0035349 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 281.2 bits (718), Expect = 4.0e-75
Identity = 185/535 (34.58%), Postives = 301/535 (56.26%), Query Frame = 0
Query: 546 EPLTYEQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKG 605
EP TY +A + W M +E+ ++ +TW + P K + CKW+YK+K + G
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 144
Query: 606 ENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFL 665
+ R+KARLVAKGYTQQ GID+ E FSPV + +S+ ++L++ A ++ L Q+D++ AFL
Sbjct: 145 TIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 204
Query: 666 HGELEEEIYMRQPPGFEVRGKE----NSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFV 725
+G+L+EEIYM+ PPG+ R + N+VC L KS+YGLKQ+ RQW+ KF + GFV
Sbjct: 205 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 264
Query: 726 KRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQI 785
+ D ++K + + +L+YVDD++I S + + ++ LK QLKS F+++D+G
Sbjct: 265 QSHSDHTYFLKI-TATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 324
Query: 786 LGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQHFRLSKALSPKSEEERK 845
LG+ + R+ AG + + Y L+ + E C P + S S S +
Sbjct: 325 LGLEIARS-AAGINICQRKYALDLLD-----ETGLLGCKPSSVPMDPSVTFSAHSGGDFV 384
Query: 846 EMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKGTTNY 905
+ + Y ++G LMY + +R DI+FA++ +S++ H +AV I+ YIKGT
Sbjct: 385 DAK--AYRRLIGRLMY-LQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQ 444
Query: 906 GLIYSRGSLKDSCLVGYSDADFAADLDKRRSTSGYIFTLFQNTVSWRSHLQSVTALSTTE 965
GL YS S + L +SDA F + D RRST+GY L + +SW+S Q V + S+ E
Sbjct: 445 GLFYS--SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 504
Query: 966 SESISLVEAVNEGTWLTGLVFEL-LGDTNQLSVFSDSQSAIALSKNPQYHDRSKHIDTRY 1025
+E +L A +E WL EL L + +F D+ +AI ++ N +H+R+KHI++
Sbjct: 505 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 564
Query: 1026 HYLREKTMNEEIKLGKVASANNPTDMLTK---PLTAARMMHLIDLLKIMQLGRLL 1073
H +RE+++ + L A + D T+ P+ +M+++ + + L L+
Sbjct: 565 HSVRERSV-YQATLSYSFQAYDEQDGFTEYLSPILRGTIMYIVSMFGLAGLEALI 602
BLAST of Lag0035349 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 111.7 bits (278), Expect = 4.2e-24
Identity = 73/237 (30.80%), Postives = 131/237 (55.27%), Query Frame = 0
Query: 740 VYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQ 799
+YLL+YVDD+L+ + + L QL S F MKD+G LG+ ++ +G L ++Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQ-IKTHPSG-LFLSQ 60
Query: 800 SYYLEKIVKRYCLENAKTVCVPLAQHFRLSKALSPKSEEERKEMEHVPYSSVVGSLMYVM 859
+ Y E+I+ + + K + PL +L+ ++S + + + S+VG+L Y +
Sbjct: 61 TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSD-----FRSIVGALQY-L 120
Query: 860 TCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKGTTNYGLIYSRGSLKDSCLVGYS 919
T +RPDI++A+++V + M + ++ +K ++RY+KGT +GL + S + + +
Sbjct: 121 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN--VQAFC 180
Query: 920 DADFAADLDKRRSTSGYIFTLFQNTVSWRSHLQSVTALSTTESESISLVEAVNEGTW 977
D+D+A RRST+G+ L N +SW + Q + S+TE+E +L E TW
Sbjct: 181 DSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Lag0035349 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 81.6 bits (200), Expect = 4.7e-15
Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0
Query: 316 GQPENGLYTLNGASCVDPANNVVPTQPNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTK 375
G + LY L G S +N+ T E LWH RLAH+S++G+ L K+G L +K
Sbjct: 41 GNRHDSLYILQG-SVETGESNLAETA--KDETRLWHSRLAHMSQRGMELLVKKGFLDSSK 100
Query: 376 SVSLPFCEQCTLGKSARVQFNRSMHKTQGILDYIHSDL 414
SL FCE C GK+ RV F+ H T+ LDY+HSDL
Sbjct: 101 VSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDL 135
BLAST of Lag0035349 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 81.3 bits (199), Expect = 6.1e-15
Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0
Query: 548 LTYEQAIKSENKS--------QWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKL 607
LT IK E KS W MQEEL++L +N TW LV P ++ CKW++K
Sbjct: 18 LTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKT 77
Query: 608 KPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDL 654
K G R KARLVAKG+ Q+ GI + E +SPVVR ++I +L++ Q ++
Sbjct: 78 KLHSDG-TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130
BLAST of Lag0035349 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 57.0 bits (136), Expect = 1.2e-07
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0
Query: 859 MTCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKGTTNYGLIYSRGSLKDSCLVGY 918
+T +RPD+ FA++ +S++ S +AV ++ Y+KGT GL YS S D L +
Sbjct: 3 LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATS--DLQLKAF 62
Query: 919 SDADFAADLDKRRSTSGY 937
+D+D+A+ D RRS +G+
Sbjct: 63 ADSDWASCPDTRRSVTGF 78
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0050719.1 | 6.3e-280 | 42.44 | putative gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0047995.1 | 5.2e-258 | 40.82 | retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa... | [more] |
RVW58503.1 | 8.0e-251 | 40.49 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
TYK25306.1 | 1.0e-245 | 39.85 | putative gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAF5775409.1 | 1.6e-238 | 38.19 | putative RNA-directed DNA polymerase [Helianthus annuus] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 3.9e-184 | 33.01 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 8.9e-112 | 25.35 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q94HW2 | 9.0e-80 | 35.88 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.8e-75 | 32.71 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P25600 | 4.7e-36 | 30.91 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UB25 | 3.0e-280 | 42.44 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... | [more] |
A0A5A7U2U7 | 2.5e-258 | 40.82 | Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku... | [more] |
A0A438FEW0 | 3.9e-251 | 40.49 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A5D3DNU1 | 4.9e-246 | 39.85 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A2P5YYC3 | 7.1e-237 | 38.26 | Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00016 PE=4 SV... | [more] |