Lag0035349 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035349
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr3: 20091053 .. 20099775 (+)
RNA-Seq ExpressionLag0035349
SyntenyLag0035349
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCTAAGTTTGAGCTTGAGAAATTTGATGGTAAAGGGGATTTTAGCTTGTGGAGGAAGAAACTAAAGGCTATGTTAGTGCAACTTAAGGTTGCTAAGATTTTAGAAAAACCAGAAGACCTTCCAGAACCCCTATCCGAAGCAAAGAGAAAAGAGATGGATGAAATTGCCTTTAGCACTATGATTCTTTATCTATCTGACTCTGTGTTACGCCAAGTAGATGAGATAAACAATGCTGTTGAAATATGGAAGAAGCTAGATTCTATGTACTTGAATAAGTCTTTAACAAATAAAATCTTGTTGAAGGAAAGACTATTTGGTTATAGAATGGACTCAACAAAACCTTTGGAAGATAATCTAGATGAATTCGTTAAGATTTTCTTAGATGTAACAAACATCGGTGAGAAAATTGATGATGAAAACCAAGCAATAATATTGTTAAATTCGCTGTCTGAAAGCTATAAAGAGATAAAAGCTGCTATAAAATATGGAAGGGACTCTTTGACATTGAGACTTGTCCTTGATGCTTTAAGATCAAAAGATATGGAAACTAGAACACAGAGAAAAGAAACTGAGGCATTAACAGTGAGGGGAAGACCTGAAAATAGACTGAATACTCCAAAGATTAACAAGAGAGACCAAAACAAACATAGATCAAAATCAAAGGGCAAAGAAACCAGGGAGTGTTTTTATTGCCATAAATCAGGTCACCTCATTAAAGACTGTAGGAAGCTTCAGTATAAAAACAAACATCAGAATAAGAAGGAGGGCCAAAACTCAGCTAATATCCATGAGAGTTACGATTCAACAAAGGTACTCACCATTTCAGACCTTAACCCTACAGAAGAATAGATATTAGACTCCGGATGCTCCTACCACATGAATCCACACAAACATTGTTTTTTAGACCTAAAAGAACAAGATGGAGGAAAGGTTTTAATGGGTAATAACCAACAGTGTTCTATCAAAGGTGTTGGTTCTGTAAAACTCAACTTAATGGACGAAACTCATAAAATTCTGTCATCCGTTAGATATGTCCCTGATTTGAAAAGAAACCTTATCTCATTAGGGACTTTAGATAAGGCTGGGTATAGATATAAGTCAGAGGGAGGAATTATGAAAATATCAAAGGGGTCTTTGTTGATGATGACAGGCAACCTGAAAACGGATTGTATACTTTGAATGGGGCATCATGTGTTGACCCTGCCAATAATGTAGTTCCAACCCAACCTAATAATAGTGAAGCCCTATTGTGGCACAAGAGATTAGCACATGTTAGTGAGAAGGGGTTGGCTGAATTGCAAAAACAGGGGCTTCTTGGAAAAACTAAATCAGTATCTTTACCCTTCTGTGAGCAGTGTACACTTGGGAAATCTGCTAGGGTCCAATTCAATCGATCAATGCATAAAACTCAAGGCATTTTAGATTATATTCATTCTGATCTGTGAGGGCCGGCTAGAGTACCAACTTTAGGAGGAGCCAAATACTTTCTAAGCATCATAGATGATTATTCTCGAAAACTATGGGTGTATATGCTTAAAAGTAAATCAGATGTGTTTGAAACTTTCTCCAACTGGAAGACTCTTGTGGAAAACCAAACTAATAAGAAGATTAAGAAAATTCAAACAGATAATGACCTAGAGTTTTTAAGTGAAAACTTCAAGAACATGTGCACCAAATCTGGATTTCAGAAGCATTTAACTATACCAAACACACCCCAACAAAATGGTCTTTCGAGAGGTACAATAGAACCATCCTTGAGAGAGTGAGGTGTATGTTAGCTAATGCCAAACTACCTAAAGTGTTTTGGGGGGAAGCTGTTAACACAACAACATACCTAATAAACCGTAGTCCCTCTTTGGCATTAAATCTAAAAACTCCTCAAGAGGTTTGGACTGGAAAGCCACCAGATTTGAGTTATTTGAAAATTTTCGGATGCTCTGCCTATGCCCATGTAAAGCAAGATAAACTAGATCCAAGGGCTAAAAAATGTGTCTTCCTAAGATACCCAAATGGGGTAAAAGGCTATAAATTATGGACTTTAACTCAAGGGAAATCAAAATGCATAATAAGGAGAGATGTGAAATTCAATGAGGAAGAGATGTCCTGAGAAAAAGAAGGTAGTTTTGTCAGTAAGGGAGTTTCAGAACAGGAGGATTCTTTTGTTATCCAGCTTGCTTAAGATGTTATGGATAATGAACAACAAACCTTAAATCCGAATAACATCGACAGTGGTAACACTGAATAACCTGAAAATGAATTAGAGGAAGAACCTCAACCAGAAGATCCTTCAAATGTCCCTGTACAAACTTCAGAAGAAAATTTAACCAACTACCAACTTACTAGAGATAGGCAGAGACGCACAATTAGGCCTCCTTCCAGATTTGAACAGGCAAATTGCAACATAGAAATTCCAGATTCAGCGGCTTATGCATTAATATGTGATGATGATAATGAAATTTCAGAACCTTTAACCTATGAACAAGCCATAAAATCAGAAAACAAATCTCAGTGGGTTACAACAATGCAAGAGGAGTTAAACTCCCTTATGAAGAATAATACTTGGGCTTTAGTGGAGAAACCCGAAGAGCATAAGTTGGTAGATTGTAAATGGTTGTACAAACTAAAACCTAGTCTTAAAGGAGAAAATAAGCCAAGATTTAAGGCTAGGTTAGTAGCCAAAGGGTACACACAACAATATGGAATAGATTATACTGAAATATTTTCACCAGTTGTGAGATACTCTTCCATACATGTACTGTTATCCTTGGTAGCTCAATTTGATCTAGAACTAGAACAAATGGACGTTACAACCGCGTTCTTACATGGGGAACTAGAAGAGGAAATCTACATGAGACAACCACCGGGATTTGAGGTGAGGGGAAAAGAAAATTCGGTATGCAGATTATTAAAATCACTTTATGGCTTGAAACAATCTCCTCGTCAATGGTATAAGAAATTTGATGGATTTATTCAGTCTTGTGGCTTTGTTAAAAGAAAATATGACAGCTGTGTGTATATTAAATATGAGAACCATGTTGTTGTTGTATATCTCCTCATATATGTAGATGATATGCTTATAGCCTCTCAAGATATCAGTAAGATTGAACGACTAAAATTACAATTGAAGAGTGAATTTGAAATGAAAGACATAGGGTCAGCATTTCAAATTCTTGGCATGAATTTAGTAAGAAACAGAGGAGCTGGAACCTTAGTTATAAATCAGTCATATTATCTTGAGAAAATAGTGAAGAGATACTGCCTTGAGAATGCAAAAACAGTATGTGTACCTTTAGCACAACACTTTAGACTGTCTAAGGCTTTATCACCAAAATCAGAAGAAGAAAGGAAAGAGATGGAACATGTACCATATTCAAGTGTTGTAGGAAGCTTGATGTATGTAATGACATGTTCTAGACCAGACATAGCCTTTGCCATGAGTGTTGTGAGTCGATACATGAGTGATCTAGGGAAACCACACTGGGAAGCCGTTAAATGGATCATAAGGTACATCAAAGGAACAACCAATTATGGACTGATTTATTCAAGAGGGAGCTTAAAAGACAGTTGCCTAGTAGGATACTCTGATGCAGACTTCGCAGCAGATCTGGATAAGAGAAGATCAACCTCAGGGTATATTTTTACTTTGTTTCAGAATACAGTGAGTTGGAGATCCCATCTCCAATCAGTAACAGCTCTCTCTACAACAGAATCGGAGTCTATCTCTCTCGTTGAAGCAGTAAATGAAGGTACTTGGTTAACGGGCTTAGTTTTCGAATTGCTTGGTGATACTAATCAGCTTTCTGTTTTTAGTGACAGCCAGAGTGCCATTGCACTGTCTAAAAATCCACAGTACCATGATCGTTCGAAGCATATCGATACGAGGTATCATTACCTCAGGGAGAAAACTATGAATGAAGAAATCAAGCTGGGAAAGGTAGCATCTGCAAATAACCCAACCGATATGCTGACCAAACCTCTCACAGCAGCTAGAATGATGCACTTGATTGACCTACTTAAAGTATGTGTTGGCTAATTGAAGAAGAGAGGAAAGTATCAAAGGGTAGCAGCAGCACATCAGATGTTTTTTTAACAAAGTTTATGACTGTCAAGAGGGAGATTGTGAAAGCTCTTGATTTGCCATGTCATAAACCTTTTTTGTACACATCAGAGTCACGTCAAGGATATGAAGCTGAGCTGGTTTTCTTTCTAGAAGTTTATTTCCACTCCATTTATCTTTTATTCGTATTTGTATATGGGTCCCACTGTACTATTTCCGTTGTAACAGAAGAGGATTATAAAAACTCTTGTATTTTTCTTCTTCGAGTGAATAGAGTGCACTGGGGAGAGCAAAGAGTTAGTGAGGAGGGAAATTTCTTCAGGGAAATGAGGCTGTGAGTCATGGAGTGAATCTCCTTTCGTTGTATTCCTAGATTTCTGTATTTTCTCTGATGAGTAATAAGAACATTCGAGCTGCCCTTTGAAAGTGGACGTAGACTATCACCATGATAGTTGAACCACTCTAACTCCTTGTGCATTTCTCTTCCCTTGTCTACTAATTCGTTTTTGTGAATTGTTTGTCAGCTCTATTTTCATCACATCAATTTAGTTTAATTTAACGAAAAGAAAAAAATTAATTATTTTAAATCAACCCTATTCACCCTCTCTAATGTTTTCATATATACGATCCTACAACAATGATTCGACGTACATGCTGCAAGTGTAGCAATTGTGACTGAGCAACTAGCGACAGTGTGGAACCGTCTTGAGTCACGAATTGCAAGTGGCTCAGACGACAACATGACAATGATCTGGGTGTTGGCAGATCATGCAGTTGGGGCGTTTGTTGTCGGTTTTTGCCCGCGACGACACATGGTGGCTGAAGCTGCAAAATAGGGGCGGTGGGCATTGGGCTGCAGGTGGAGTGACGACGACAGTTTGGTGGTCAGACATGAAAGAGAAAGAAATCAATGGAAAAGGGGAGCTACATTGCTACGTTAAACCAAGAGAGGGAGAAGATGAGGGTTAGAGAGAGGGGGCGTCGGGTTCGTTTTTAAAAAAAAAAATCTTTAAAAAAAAACCAATATGTGGCTCGCGTGAGTCACGCTAGCCACCCTCCCCTCCTTTAAACACGTTGACTAACATTTTGTTTGCTTTTTCACAAAATTAAAAATTAACTCCCTAGACCGAGGATTCGGATCAGGATTCGGCACCTGACGGTTTTGACATTCTCCTGCAATCTGACCATGTCACCATATTTGTTTTAAATAGCTTTTAAGAGTGAAGATTGTCCCCACAGACCAACCTGAGTCATTTTAGCATGCTTTGTCCTCTTTGACGTGGCTTCTTAGAAAAAATTCCAAGAGATCACCTAACATATAGGACTTCACCCAGCCAAACATGCTTCACTTTTGAGTTCCTATGATTGAACCATCGAAAAGGTAAGCACATCTTATTGATATAAGTAGTTACTATCAATTCTTTCAAGCTTATCTTGACCATATACTTTCATACCTTCATGATCCCTCTCATTTGAATGTGGTCTCAATTCATTCGTATACCCCTCCTATACTTGAGCGTCACATTGTGTCGGAAGAAAGCTATAAATAGATTTTTGAACGCAATGATTGTATATTCATATCGATTAATATATTTTGATATTATTTTGTTCAATAAGATGTATAACTATTTTTTATATATATAAATAAACAAGAAAGATAATGAAATTTGAAATAATTAGAAAATTTTCCTACATTATAGGAATTTTACCTTTTTATGTAATTATTTTTTTAAAATAATAAAAACAAAATAAAAGATTTATTATAAGTTTAGTCCTTGAACTTTCAGGATTGTATTAATTAGGTCCCTAAACTTTCAAAAGTTTATAATAGGTCCCTGTGTTGGCTTTTTGGCCCTTAATCTCAAATTAATTAATTAATTAATTAATGTTTTGATGATAACAAACCCAATTTTTAATTACTGAAAATTTTAGTGTTTTAATGTGCCCATAGCGAAGAGCTCGGCAAAACGATTCAAACGCCTCTTGAATCACTCAAATCGGAGCTAAAACAAAGAAGTTATAGCCGAAACAAGCTTTAACGAAAAATACCCGAGGTGATGACGTGGCGGGCTGAGTCAACATCAATGGACCAATCCGGCGACGACACATGGAGCAGTGGGAGAGTGACATGTGGGGCTTTTAATTATTTAAATAGTATATATATTGTTTATTAAAAAAAAAAATCTTGTGAGTCACATTTCTTTAGTTTTAAAAAAAAAAAAATCTAAATTTCATTTAATGCTCCTGACCAGTTAAAAAAAATTATTATTATATATTTTAAAAATTCTTACCGTTGGTATGTTAAAAATTAAAAAGAATTTACTTATAATAATTATTATTATATATTTATTTTATTATTATTATTTTAAATTTCTTTTAATCTCCACCCTTTATTTTTCTTTATCTTCAAATCCAATGGTCCAAATTAAATTTAACTTTTTACCCATTTTCTCTCTCTTTTTAAACTCATCTTCCTCTCCAAAATTTTACCAACAATTTTACATTTTTACAATTCTCCAAGATCAAAAGTTTCCATTCTCTCCAAGCTCCCAATTTTTTTTCTTTTCATCTTATTCTTGAGAGAGTGTTATTGTATTGTGAGGATACATTTGTTGAGTGCTCAAATTTGTAAATCCACTCTATTGAGAGTTTTATTGTATTCTTAAAAAATTCCAACATTTGTAACGGTTTGATCCTAACCCGTGGAAAGGATCAGGTTTGCTCTTGAACCCGTAAAAGGAGCGATGGTGTAACGGTTGGGCTCTAATCCGTGGAAAGAGTCGAAAGATTTTTATTCAAATTCTCAAGAGGCGCTTGGGGAGTGGAGTAGGTCGAGTTTGACCGAACCACTATAAAAATTACGGTGTCTTCTTCTCTAACTCTTTCCTTTTTATTTTTGCAATTAATTTAAGCAATTTATTGCATGCTTTACTTTGTTCTTATTTGTTGCATAAATTGAATTTCTCTTATTGTTTATAAAAAGTGTATTAATTAGTTTAATTGGGTTAATTTAGAAAAAAAAGTTTTAATTAAATCCTATTCACCCCCCTCTAGGGTTGCCATACCGATCCAACACCCTGAACTTTAGAAATGTCTAATAGGTCACCGAACTTTAAATTTTATGTCTAATAAGTGCCTAACACATTTGAGATTTTTAAAAATTAACCAATCTATTAAATATAAAATTGAATTTTATGTTTATTGGGACCTTAAACTTCCAATTTTGTATCTAATAGGCATGTGAATTTTAAAAAACATCAAATAGGTCAATGACTTATTAGATACAAAATTGAAAGCTATATGACCTATTTGACACACAAAAGTGAAAGCTTAAGAATTGTTATTGGATACTTTTTAAAGTTTAGAGACCTATTGGAAACAAAATTGAAAGTCCGAGGAACTATTTGACACATTTTAAAGTTTAGGGACCAAATTAATACAACTCTCAAAGTTCAGGGACTAACTGGTAATTTAACCAAAAATAAATTAATCAATTTTTATTTAAATTTTATATTTTTTAGTTCAACTACATATATTTGACTAGTAACAAACACATACGATGCACATGAAATTTTGTAACTTTATATTTGATATAAATTTTTTATTTTATACTACATTTCTCTTATTTTAATCTTGTATATTTTTTTTGTAATTTTATATTTGATTTTATTAGCCATTGAGGTGTTGTAACAAGTTAACCACAAAACTATTGAAAAAAGCGTCAACATAATTGGTTGTAGGAAAAAAAATCAACGTAATTTGTCAATTTCATTGAAGCAATTATGAATTAATTAAATGAAACTTTTTTAAATCAATTAGAAGTTTTTAATTGATAAATATGGTACTTGACAAGTATTTATAGAATTTATAAATTAATTAAAGAAAAAAATTCCATGAGGTTTGAGTTAGGTTTTATTTTGGTCCCTTCGTTTTCAAACTCAACAATATTGTTTGGTTTTAGTTTCATTTTGGTCACTCCATCCAATTTTCCTCCAATTTTCCATTAAAAGTTAACAGAACATTGACGTGGCACATATTTTTTATTTAAAAAATATATTTTTTAATTTTTTAAATAAAAATAATATTAAATTAATTTAAAATTTATTATTTTATTATTTCATTTTTCTCTCTCCCTTCTCCCCCTCCTCCTTCTTCTTCTCCTCCTCCTCCTCCGCCGCTGGTCACCTCTCCCGCTAGTCATCGCCGCCATCAACGGCCGCCCACCGTCATCAGAATATTTTTTCTCTTTTTTTTGTTCTTTCTTTCTCTCTCCCACACCATCTTCTTCTCTCTCACCTTCCTTCTATTTCTCTCTGTACTGTCCCTCTCTTCTTTCTTTCTCTTCTCTCTCACCATCTCTCTTTGTTCTCCTTTGCTCCGACAAACAGACCCACGACGTGCGAAGACCCACGACCTCTCTCTCCCTCGTCCCTCCTTGAGCACGAAGACCCACGACTTCTCTCTCCCTCGTTCCTCATTGCGCGTGAAGACCCACGATGAGACAACCACAATTCTCTCACTCCTCGTGTGCAAAGGGGAAAGGTCTGAAACGAAGGGGAAATCCCATTCGTTTCAAATCGATTCCAAGAAAGAGACGGAGATGGCGCAAGGGCGACGATGCGAGGATGGAGCGGCAGCGACGGCGATGGGGAAAAGATAA

mRNA sequence

ATGTCTGCTAAGTTTGAGCTTGAGAAATTTGATGGTAAAGGGGATTTTAGCTTGTGGAGGAAGAAACTAAAGGCTATGTTAGTGCAACTTAAGGTTGCTAAGATTTTAGAAAAACCAGAAGACCTTCCAGAACCCCTATCCGAAGCAAAGAGAAAAGAGATGGATGAAATTGCCTTTAGCACTATGATTCTTTATCTATCTGACTCTGTGTTACGCCAAGTAGATGAGATAAACAATGCTGTTGAAATATGGAAGAAGCTAGATTCTATGTACTTGAATAAGTCTTTAACAAATAAAATCTTGTTGAAGGAAAGACTATTTGGTTATAGAATGGACTCAACAAAACCTTTGGAAGATAATCTAGATGAATTCGTTAAGATTTTCTTAGATGTAACAAACATCGGTGAGAAAATTGATGATGAAAACCAAGCAATAATATTGTTAAATTCGCTGTCTGAAAGCTATAAAGAGATAAAAGCTGCTATAAAATATGGAAGGGACTCTTTGACATTGAGACTTGTCCTTGATGCTTTAAGATCAAAAGATATGGAAACTAGAACACAGAGAAAAGAAACTGAGGCATTAACAGTGAGGGGAAGACCTGAAAATAGACTGAATACTCCAAAGATTAACAAGAGAGACCAAAACAAACATAGATCAAAATCAAAGGGCAAAGAAACCAGGGAGTGTTTTTATTGCCATAAATCAGGTCACCTCATTAAAGACTGTAGGAAGCTTCAGTATAAAAACAAACATCAGAATAAGAAGGAGGGCCAAAACTCAGCTAATATCCATGAGAGTTACGATTCAACAAAGTGTTCTATCAAAGGTGTTGGTTCTGTAAAACTCAACTTAATGGACGAAACTCATAAAATTCTGTCATCCGTTAGATATGTCCCTGATTTGAAAAGAAACCTTATCTCATTAGGGACTTTAGATAAGGCTGGGCAACCTGAAAACGGATTGTATACTTTGAATGGGGCATCATGTGTTGACCCTGCCAATAATGTAGTTCCAACCCAACCTAATAATAGTGAAGCCCTATTGTGGCACAAGAGATTAGCACATGTTAGTGAGAAGGGGTTGGCTGAATTGCAAAAACAGGGGCTTCTTGGAAAAACTAAATCAGTATCTTTACCCTTCTGTGAGCAGTGTACACTTGGGAAATCTGCTAGGGTCCAATTCAATCGATCAATGCATAAAACTCAAGGCATTTTAGATTATATTCATTCTGATCTTAAATCAGATGTGTTTGAAACTTTCTCCAACTGGAAGACTCTTGTGGAAAACCAAACTAATAAGAAGATTAAGAAAATTCAAACAGATAATGACCTAGAGTTTTTAAGTGAAAACTTCAAGAACATGTGCACCAAATCTGGATTTCAGAAGCATTTAACTATACCAAACACACCCCAACAAAATGGTCTTTCGAGAGAGGAAGAACCTCAACCAGAAGATCCTTCAAATGTCCCTGTACAAACTTCAGAAGAAAATTTAACCAACTACCAACTTACTAGAGATAGGCAGAGACGCACAATTAGGCCTCCTTCCAGATTTGAACAGGCAAATTGCAACATAGAAATTCCAGATTCAGCGGCTTATGCATTAATATGTGATGATGATAATGAAATTTCAGAACCTTTAACCTATGAACAAGCCATAAAATCAGAAAACAAATCTCAGTGGGTTACAACAATGCAAGAGGAGTTAAACTCCCTTATGAAGAATAATACTTGGGCTTTAGTGGAGAAACCCGAAGAGCATAAGTTGGTAGATTGTAAATGGTTGTACAAACTAAAACCTAGTCTTAAAGGAGAAAATAAGCCAAGATTTAAGGCTAGGTTAGTAGCCAAAGGGTACACACAACAATATGGAATAGATTATACTGAAATATTTTCACCAGTTGTGAGATACTCTTCCATACATGTACTGTTATCCTTGGTAGCTCAATTTGATCTAGAACTAGAACAAATGGACGTTACAACCGCGTTCTTACATGGGGAACTAGAAGAGGAAATCTACATGAGACAACCACCGGGATTTGAGGTGAGGGGAAAAGAAAATTCGGTATGCAGATTATTAAAATCACTTTATGGCTTGAAACAATCTCCTCGTCAATGGTATAAGAAATTTGATGGATTTATTCAGTCTTGTGGCTTTGTTAAAAGAAAATATGACAGCTGTGTGTATATTAAATATGAGAACCATGTTGTTGTTGTATATCTCCTCATATATGTAGATGATATGCTTATAGCCTCTCAAGATATCAGTAAGATTGAACGACTAAAATTACAATTGAAGAGTGAATTTGAAATGAAAGACATAGGGTCAGCATTTCAAATTCTTGGCATGAATTTAGTAAGAAACAGAGGAGCTGGAACCTTAGTTATAAATCAGTCATATTATCTTGAGAAAATAGTGAAGAGATACTGCCTTGAGAATGCAAAAACAGTATGTGTACCTTTAGCACAACACTTTAGACTGTCTAAGGCTTTATCACCAAAATCAGAAGAAGAAAGGAAAGAGATGGAACATGTACCATATTCAAGTGTTGTAGGAAGCTTGATGTATGTAATGACATGTTCTAGACCAGACATAGCCTTTGCCATGAGTGTTGTGAGTCGATACATGAGTGATCTAGGGAAACCACACTGGGAAGCCGTTAAATGGATCATAAGGTACATCAAAGGAACAACCAATTATGGACTGATTTATTCAAGAGGGAGCTTAAAAGACAGTTGCCTAGTAGGATACTCTGATGCAGACTTCGCAGCAGATCTGGATAAGAGAAGATCAACCTCAGGGTATATTTTTACTTTGTTTCAGAATACAGTGAGTTGGAGATCCCATCTCCAATCAGTAACAGCTCTCTCTACAACAGAATCGGAGTCTATCTCTCTCGTTGAAGCAGTAAATGAAGGTACTTGGTTAACGGGCTTAGTTTTCGAATTGCTTGGTGATACTAATCAGCTTTCTGTTTTTAGTGACAGCCAGAGTGCCATTGCACTGTCTAAAAATCCACAGTACCATGATCGTTCGAAGCATATCGATACGAGGTATCATTACCTCAGGGAGAAAACTATGAATGAAGAAATCAAGCTGGGAAAGGTAGCATCTGCAAATAACCCAACCGATATGCTGACCAAACCTCTCACAGCAGCTAGAATGATGCACTTGATTGACCTACTTAAAATCATGCAGTTGGGGCGTTTGTTGTCGGTTTTTGCCCGCGACGACACATGGTGGCTGAAGCTGCAAAATAGGGGCGGTGGGCATTGGGCTGCAGGTGGAGTGACGACGACAGTTTGGTGGTCAGACATGAAAGAGAAAGAAATCAATGGAAAAGGGGAGCTACATTGCTACGTTAAACCAAGAGAGGGAGAAGATGAGGACCCACGACGTGCGAAGACCCACGACCTCTCTCTCCCTCGTCCCTCCTTGAGCACGAAGACCCACGACTTCTCTCTCCCTCGTTCCTCATTGCGCGTGAAGACCCACGATGAGACAACCACAATTCTCTCACTCCTCGTGTGCAAAGGGGAAAGGTCTGAAACGAAGGGGAAATCCCATTCGTTTCAAATCGATTCCAAGAAAGAGACGGAGATGGCGCAAGGGCGACGATGCGAGGATGGAGCGGCAGCGACGGCGATGGGGAAAAGATAA

Coding sequence (CDS)

ATGTCTGCTAAGTTTGAGCTTGAGAAATTTGATGGTAAAGGGGATTTTAGCTTGTGGAGGAAGAAACTAAAGGCTATGTTAGTGCAACTTAAGGTTGCTAAGATTTTAGAAAAACCAGAAGACCTTCCAGAACCCCTATCCGAAGCAAAGAGAAAAGAGATGGATGAAATTGCCTTTAGCACTATGATTCTTTATCTATCTGACTCTGTGTTACGCCAAGTAGATGAGATAAACAATGCTGTTGAAATATGGAAGAAGCTAGATTCTATGTACTTGAATAAGTCTTTAACAAATAAAATCTTGTTGAAGGAAAGACTATTTGGTTATAGAATGGACTCAACAAAACCTTTGGAAGATAATCTAGATGAATTCGTTAAGATTTTCTTAGATGTAACAAACATCGGTGAGAAAATTGATGATGAAAACCAAGCAATAATATTGTTAAATTCGCTGTCTGAAAGCTATAAAGAGATAAAAGCTGCTATAAAATATGGAAGGGACTCTTTGACATTGAGACTTGTCCTTGATGCTTTAAGATCAAAAGATATGGAAACTAGAACACAGAGAAAAGAAACTGAGGCATTAACAGTGAGGGGAAGACCTGAAAATAGACTGAATACTCCAAAGATTAACAAGAGAGACCAAAACAAACATAGATCAAAATCAAAGGGCAAAGAAACCAGGGAGTGTTTTTATTGCCATAAATCAGGTCACCTCATTAAAGACTGTAGGAAGCTTCAGTATAAAAACAAACATCAGAATAAGAAGGAGGGCCAAAACTCAGCTAATATCCATGAGAGTTACGATTCAACAAAGTGTTCTATCAAAGGTGTTGGTTCTGTAAAACTCAACTTAATGGACGAAACTCATAAAATTCTGTCATCCGTTAGATATGTCCCTGATTTGAAAAGAAACCTTATCTCATTAGGGACTTTAGATAAGGCTGGGCAACCTGAAAACGGATTGTATACTTTGAATGGGGCATCATGTGTTGACCCTGCCAATAATGTAGTTCCAACCCAACCTAATAATAGTGAAGCCCTATTGTGGCACAAGAGATTAGCACATGTTAGTGAGAAGGGGTTGGCTGAATTGCAAAAACAGGGGCTTCTTGGAAAAACTAAATCAGTATCTTTACCCTTCTGTGAGCAGTGTACACTTGGGAAATCTGCTAGGGTCCAATTCAATCGATCAATGCATAAAACTCAAGGCATTTTAGATTATATTCATTCTGATCTTAAATCAGATGTGTTTGAAACTTTCTCCAACTGGAAGACTCTTGTGGAAAACCAAACTAATAAGAAGATTAAGAAAATTCAAACAGATAATGACCTAGAGTTTTTAAGTGAAAACTTCAAGAACATGTGCACCAAATCTGGATTTCAGAAGCATTTAACTATACCAAACACACCCCAACAAAATGGTCTTTCGAGAGAGGAAGAACCTCAACCAGAAGATCCTTCAAATGTCCCTGTACAAACTTCAGAAGAAAATTTAACCAACTACCAACTTACTAGAGATAGGCAGAGACGCACAATTAGGCCTCCTTCCAGATTTGAACAGGCAAATTGCAACATAGAAATTCCAGATTCAGCGGCTTATGCATTAATATGTGATGATGATAATGAAATTTCAGAACCTTTAACCTATGAACAAGCCATAAAATCAGAAAACAAATCTCAGTGGGTTACAACAATGCAAGAGGAGTTAAACTCCCTTATGAAGAATAATACTTGGGCTTTAGTGGAGAAACCCGAAGAGCATAAGTTGGTAGATTGTAAATGGTTGTACAAACTAAAACCTAGTCTTAAAGGAGAAAATAAGCCAAGATTTAAGGCTAGGTTAGTAGCCAAAGGGTACACACAACAATATGGAATAGATTATACTGAAATATTTTCACCAGTTGTGAGATACTCTTCCATACATGTACTGTTATCCTTGGTAGCTCAATTTGATCTAGAACTAGAACAAATGGACGTTACAACCGCGTTCTTACATGGGGAACTAGAAGAGGAAATCTACATGAGACAACCACCGGGATTTGAGGTGAGGGGAAAAGAAAATTCGGTATGCAGATTATTAAAATCACTTTATGGCTTGAAACAATCTCCTCGTCAATGGTATAAGAAATTTGATGGATTTATTCAGTCTTGTGGCTTTGTTAAAAGAAAATATGACAGCTGTGTGTATATTAAATATGAGAACCATGTTGTTGTTGTATATCTCCTCATATATGTAGATGATATGCTTATAGCCTCTCAAGATATCAGTAAGATTGAACGACTAAAATTACAATTGAAGAGTGAATTTGAAATGAAAGACATAGGGTCAGCATTTCAAATTCTTGGCATGAATTTAGTAAGAAACAGAGGAGCTGGAACCTTAGTTATAAATCAGTCATATTATCTTGAGAAAATAGTGAAGAGATACTGCCTTGAGAATGCAAAAACAGTATGTGTACCTTTAGCACAACACTTTAGACTGTCTAAGGCTTTATCACCAAAATCAGAAGAAGAAAGGAAAGAGATGGAACATGTACCATATTCAAGTGTTGTAGGAAGCTTGATGTATGTAATGACATGTTCTAGACCAGACATAGCCTTTGCCATGAGTGTTGTGAGTCGATACATGAGTGATCTAGGGAAACCACACTGGGAAGCCGTTAAATGGATCATAAGGTACATCAAAGGAACAACCAATTATGGACTGATTTATTCAAGAGGGAGCTTAAAAGACAGTTGCCTAGTAGGATACTCTGATGCAGACTTCGCAGCAGATCTGGATAAGAGAAGATCAACCTCAGGGTATATTTTTACTTTGTTTCAGAATACAGTGAGTTGGAGATCCCATCTCCAATCAGTAACAGCTCTCTCTACAACAGAATCGGAGTCTATCTCTCTCGTTGAAGCAGTAAATGAAGGTACTTGGTTAACGGGCTTAGTTTTCGAATTGCTTGGTGATACTAATCAGCTTTCTGTTTTTAGTGACAGCCAGAGTGCCATTGCACTGTCTAAAAATCCACAGTACCATGATCGTTCGAAGCATATCGATACGAGGTATCATTACCTCAGGGAGAAAACTATGAATGAAGAAATCAAGCTGGGAAAGGTAGCATCTGCAAATAACCCAACCGATATGCTGACCAAACCTCTCACAGCAGCTAGAATGATGCACTTGATTGACCTACTTAAAATCATGCAGTTGGGGCGTTTGTTGTCGGTTTTTGCCCGCGACGACACATGGTGGCTGAAGCTGCAAAATAGGGGCGGTGGGCATTGGGCTGCAGGTGGAGTGACGACGACAGTTTGGTGGTCAGACATGAAAGAGAAAGAAATCAATGGAAAAGGGGAGCTACATTGCTACGTTAAACCAAGAGAGGGAGAAGATGAGGACCCACGACGTGCGAAGACCCACGACCTCTCTCTCCCTCGTCCCTCCTTGAGCACGAAGACCCACGACTTCTCTCTCCCTCGTTCCTCATTGCGCGTGAAGACCCACGATGAGACAACCACAATTCTCTCACTCCTCGTGTGCAAAGGGGAAAGGTCTGAAACGAAGGGGAAATCCCATTCGTTTCAAATCGATTCCAAGAAAGAGACGGAGATGGCGCAAGGGCGACGATGCGAGGATGGAGCGGCAGCGACGGCGATGGGGAAAAGATAA

Protein sequence

MSAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFSTMILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNLDEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSKDMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIKDCRKLQYKNKHQNKKEGQNSANIHESYDSTKCSIKGVGSVKLNLMDETHKILSSVRYVPDLKRNLISLGTLDKAGQPENGLYTLNGASCVDPANNVVPTQPNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHKTQGILDYIHSDLKSDVFETFSNWKTLVENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLSREEEPQPEDPSNVPVQTSEENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQHFRLSKALSPKSEEERKEMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKGTTNYGLIYSRGSLKDSCLVGYSDADFAADLDKRRSTSGYIFTLFQNTVSWRSHLQSVTALSTTESESISLVEAVNEGTWLTGLVFELLGDTNQLSVFSDSQSAIALSKNPQYHDRSKHIDTRYHYLREKTMNEEIKLGKVASANNPTDMLTKPLTAARMMHLIDLLKIMQLGRLLSVFARDDTWWLKLQNRGGGHWAAGGVTTTVWWSDMKEKEINGKGELHCYVKPREGEDEDPRRAKTHDLSLPRPSLSTKTHDFSLPRSSLRVKTHDETTTILSLLVCKGERSETKGKSHSFQIDSKKETEMAQGRRCEDGAAATAMGKR
Homology
BLAST of Lag0035349 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 974.9 bits (2519), Expect = 6.3e-280
Identity = 575/1355 (42.44%), Postives = 766/1355 (56.53%), Query Frame = 0

Query: 2    SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
            S +FE+ KF+G GDFSLWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ST
Sbjct: 3    STRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYST 62

Query: 62   MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
            ++LYLSD VLR VDE     E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63   ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENL 122

Query: 122  DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
            DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYGRDSLT+ +VLDAL+++
Sbjct: 123  DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182

Query: 182  DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
            ++E + +RK+ E L  RGR E      K  K  +   RSKSKGK +R+CF CHK GH  K
Sbjct: 183  NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242

Query: 242  DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
            +C   +  +      N  +G NSA I + YDS +                          
Sbjct: 243  NCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302

Query: 302  -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
                                         C +KG GSV++   D   +IL++VRYVP LK
Sbjct: 303  TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362

Query: 362  RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
            RNLISLG LD++G   + EN                   GLY L G +    A   + + 
Sbjct: 363  RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422

Query: 422  PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
                 ++LWHKRLAHVSE+GL  L +QGLLG  K+V LPFCE C +GKS RV+F +  H 
Sbjct: 423  KVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482

Query: 482  TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
            T+GILDY+HSDL                                 K + F  F  WK  V
Sbjct: 483  TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542

Query: 542  ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
            ENQT +K+K ++TDN LEF++  F   C   G  +H T+  TPQQNGL+           
Sbjct: 543  ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602

Query: 602  ------------------------------------------------------------ 661
                                                                        
Sbjct: 603  RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662

Query: 662  --------------------------------------------------------REEE 721
                                                                    +E++
Sbjct: 663  AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722

Query: 722  PQPE------------------DPSNVPVQTSE--------------------------- 781
             Q                    D  N P   SE                           
Sbjct: 723  KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFI 782

Query: 782  ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
                   +L NYQLTRDR +R    P R+  A       D  AYAL C  D+  +EPLT+
Sbjct: 783  EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842

Query: 842  EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
            E+AI S++K QW   M+EEL SL KN TW+LV KP   KL+  KW+YK+KP   G +KPR
Sbjct: 843  EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902

Query: 902  FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
            +KARLVAKGYTQ+ G+D+ EIFSPVVR+SSI ++LS+   FD+ +EQMDVTTAFLHGELE
Sbjct: 903  YKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELE 962

Query: 962  EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
            E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY +FD FI   GF +  YD+CVY
Sbjct: 963  EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY 1022

Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1066
             K       +YLL+YVDDM++ S+D ++I  LK QL +EFEMKD+G   +ILGM++ R++
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDK 1082

BLAST of Lag0035349 vs. NCBI nr
Match: KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 902.1 bits (2330), Expect = 5.2e-258
Identity = 549/1345 (40.82%), Postives = 730/1345 (54.28%), Query Frame = 0

Query: 2    SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
            S +FE+ KF+G GDF+LWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ T
Sbjct: 3    STRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYWT 62

Query: 62   MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
            ++LYLSD VLR VDE     E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63   ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENL 122

Query: 122  DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
            DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYG DSLT+ +VLDAL+++
Sbjct: 123  DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKTR 182

Query: 182  DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
            ++E + +RK+ E L  RGR E      K  K  +   RSKSKGK +R+CF CHK GH  K
Sbjct: 183  NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242

Query: 242  DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
            +C   +  +      N  +G NSA I +  DS +                          
Sbjct: 243  NCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302

Query: 302  -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
                                         C +KG GSV++   D   +IL++VRYVP LK
Sbjct: 303  TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362

Query: 362  RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
            RNLISLG LD++G   + EN                   GLY L G +    A   + + 
Sbjct: 363  RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422

Query: 422  PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
               + ++LWHKRLAHVSE+GL  L +QGLLG  K+V LPFCE C +GKS RV+F +  H 
Sbjct: 423  KVTNMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482

Query: 482  TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
            T+GILDYIHSDL                                 K + F  F  WK  V
Sbjct: 483  TKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542

Query: 542  ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
            ENQT +K+K ++TDN LEF++  F   C   G  +H T+  TPQQNGL+           
Sbjct: 543  ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602

Query: 602  ------------------------------------------------------------ 661
                                                                        
Sbjct: 603  RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662

Query: 662  --------------------------------------------------------REEE 721
                                                                    +E++
Sbjct: 663  AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722

Query: 722  PQPE------------------DPSNVPVQTSE--------------------------- 781
             Q                    D  N P   SE                           
Sbjct: 723  KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFI 782

Query: 782  ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
                   +L NYQLTRDR +R    P R+  A       D  AYAL C  D+  +EPLT+
Sbjct: 783  EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842

Query: 842  EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
            E+AI S++K QW   M+EEL SL KN TW+LV KP   KL+  KW+YK+KP   G +KPR
Sbjct: 843  EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902

Query: 902  FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
            +KARL+                            LS+   FD+ +EQMDVTT FLHGELE
Sbjct: 903  YKARLI----------------------------LSIAVHFDMFIEQMDVTTTFLHGELE 962

Query: 962  EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
            E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY  FD FI   GF +  YD+CVY
Sbjct: 963  EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVY 1022

Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1056
             K       +YLL+YVDDM++ S+D + I  LK QL +EFEMKD+G   +ILGM++ R+R
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDR 1082

BLAST of Lag0035349 vs. NCBI nr
Match: RVW58503.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 878.2 bits (2268), Expect = 8.0e-251
Identity = 513/1267 (40.49%), Postives = 721/1267 (56.91%), Query Frame = 0

Query: 2    SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
            +AKF++EKF GK DF LWR K++A+LVQ  +   L   ++LP  + E ++ E+ E A S 
Sbjct: 3    TAKFDVEKFTGKNDFGLWRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAHSA 62

Query: 62   MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
            +IL L D+VLR+V +  +A E+W KL+S+Y+ KSL N++  K +L+ ++M  +  +ED+L
Sbjct: 63   IILSLGDTVLREVAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPSMSIEDHL 122

Query: 122  DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
            D F KI LD+ NI   I DE++AI+LL SL  SY  +K AI YGRDSLT   V   L ++
Sbjct: 123  DHFNKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDEVQSILHAR 182

Query: 182  DMETRTQRKET--EALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHL 241
            ++  + + KE   E L +RGR E R       K   +K RSKSK K+ + CF CHK GH 
Sbjct: 183  ELHKQEESKEESGEGLNIRGRSEKR-----EKKGKNSKSRSKSKTKKFK-CFICHKEGHF 242

Query: 242  IKDCRKLQYKNKHQNKKEGQNSANIHESYDSTK--------------CSIKGVGSVKLNL 301
             KDC   +     +   EG ++A I + YDS +              C I G G+V++  
Sbjct: 243  KKDCPDRRQNTVKKTVNEG-DAAVILDGYDSAEVLNVAEVDSGNNKHCKILGTGTVRIKH 302

Query: 302  MDETHKILSSVRYVPDLKRNLISLGTLDKAG-----QP-----------------ENGLY 361
             D   ++L  VRY+P+LKRNLISLG LDK+G     +P                 +NGLY
Sbjct: 303  YDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKGTIKNGLY 362

Query: 362  TLNGASCVDPANNVVPTQPNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCE 421
            TL G +     + V+      ++  LWH+RL H+S +GL EL+KQG+LG  K   LPFCE
Sbjct: 363  TLIGQTVTGKVSTVLKEDVGTTK--LWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCE 422

Query: 422  QCTLGKSARVQFNRSMHKTQGILDYIHSDL-----------KSDVFETFSNWKTLVENQT 481
             C  GK+ RV+F +++H+TQ  LDYIHSDL            S+ F  F  WK LVE QT
Sbjct: 423  HCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGASETFLKFKEWKILVETQT 482

Query: 482  NKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS--------------- 541
            ++K+KK++TDN LEFLS +F ++C K G  +H T+  TPQQNGL+               
Sbjct: 483  SRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCML 542

Query: 542  ------------------------------------------------------------ 601
                                                                        
Sbjct: 543  SSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTK 602

Query: 602  ------------------------------------------------------------ 661
                                                                        
Sbjct: 603  TDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISIDVTFNEQDMSKQTPAKDVEGL 662

Query: 662  -------REEEPQPEDPSNVPVQTSEE------------NLTNYQLTRDRQRRTIRPPSR 721
                     E  QPE       +T++E             L +Y L RDRQ+R ++PP R
Sbjct: 663  DQLQFEVEHETLQPEKSKETSSKTTQEEIVHERQNEPTQGLESYNLVRDRQKRQVKPPKR 722

Query: 722  FEQANCNIEIPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNT 781
            + QA       +  A+AL   ++    EP TY++AI S    QWV  +QEE++SL KN T
Sbjct: 723  YGQA-------EMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNET 782

Query: 782  WALVEKPEEHKLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRY 841
            W LV KP++ K+V  KW++K K    G   PR+KARLVAKG++Q+ G+DY EIFSPVV++
Sbjct: 783  WELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKH 842

Query: 842  SSIHVLLSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLY 901
            SSI +LL+ VA  DLEL+Q+DV TAFLHGEL+E IYM+ P GF    K+  VC L KSLY
Sbjct: 843  SSIRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQPPEGFGEGIKDGQVCLLKKSLY 902

Query: 902  GLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISK 961
            GLKQSPRQWYK+FD ++   GF    +D CVY K      +VYLL+YVDDML+A ++   
Sbjct: 903  GLKQSPRQWYKRFDKYMLDIGFNPSSHDGCVYFKLTED-SMVYLLLYVDDMLVACKEKRH 962

Query: 962  IERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTV 1021
            +E++K  LK+EFEMKD+GSA +ILGM + R+R    L ++Q+ Y+ K++ R+ + N KTV
Sbjct: 963  LEQVKEMLKAEFEMKDLGSAKRILGMEIERDRSKRVLRLSQNSYISKVLSRFEMNNVKTV 1022

Query: 1022 CVPLAQHFRLSKALSPKSEEERKEMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMS 1066
              PL QHFRLS   +P++ EE++ ME +PY+S+VGS+MY M CSRPD+A+A+S++SRYMS
Sbjct: 1023 STPLGQHFRLSITQAPETHEEKRFMERIPYASMVGSVMYTMVCSRPDLAYAVSMISRYMS 1082

BLAST of Lag0035349 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 861.3 bits (2224), Expect = 1.0e-245
Identity = 536/1345 (39.85%), Postives = 714/1345 (53.09%), Query Frame = 0

Query: 2    SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
            S +FE+ KF+G GDF+LWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ST
Sbjct: 3    STRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYST 62

Query: 62   MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
            ++LYLSD VLR VDE     E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63   ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENL 122

Query: 122  DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
            DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYGRDSLT+ +VLDAL+++
Sbjct: 123  DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182

Query: 182  DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
            ++E + +RK+ E L  RGR E      K  K  +   RSKSKGK +R+CF CHK GH  K
Sbjct: 183  NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242

Query: 242  DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
            +C   +  +      N  +G NSA I + YDS +                          
Sbjct: 243  NCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302

Query: 302  -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
                                         C +KG GSV++   D   +IL++VRYVP LK
Sbjct: 303  TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362

Query: 362  RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
            RNLISLG LD++G   + EN                   GLY L G +    A   + + 
Sbjct: 363  RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422

Query: 422  PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
                 ++LWHKRLAHVSE+GL  L +QGLLG  K+V LPFCE C +GKS RV+F +  H 
Sbjct: 423  KVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482

Query: 482  TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
            T+GILDY+HSDL                                 K + F  F  WK  V
Sbjct: 483  TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542

Query: 542  ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
            ENQT +K+K ++TDN LEF++  F   C   G  +H T+  TPQQNGL+           
Sbjct: 543  ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602

Query: 602  ------------------------------------------------------------ 661
                                                                        
Sbjct: 603  RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662

Query: 662  --------------------------------------------------------REEE 721
                                                                    +E++
Sbjct: 663  AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722

Query: 722  PQPE------------------DPSNVPVQTSE--------------------------- 781
             Q                    D  N P   SE                           
Sbjct: 723  KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFI 782

Query: 782  ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
                   +L NYQLTRDR +R    P R+  A       D  AYAL C  D+  +EPLT+
Sbjct: 783  EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842

Query: 842  EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
            E+AI S++K QW   M+EEL SL KN TW+LV KP   KL+  KW+YK+KP   G +KPR
Sbjct: 843  EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902

Query: 902  FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
            +KARLVAKGYTQ+ G+D+ EIFSPVVR+SSI ++LS+   FD+ +EQMDVTTAFLHGELE
Sbjct: 903  YKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELE 962

Query: 962  EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
            E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY +FD FI   GF +  YD+CVY
Sbjct: 963  EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY 1022

Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1056
             K       +YLL+YVDDM++ S+D ++I  LK QL +EFEMKD+G   +ILGM++ R++
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDK 1082

BLAST of Lag0035349 vs. NCBI nr
Match: KAF5775409.1 (putative RNA-directed DNA polymerase [Helianthus annuus])

HSP 1 Score: 837.4 bits (2162), Expect = 1.6e-238
Identity = 506/1325 (38.19%), Postives = 717/1325 (54.11%), Query Frame = 0

Query: 1    MSAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFS 60
            +S KFELEKFDG+ DFSLWR K++A+LV   V   L+  + LP  LS  ++KE+ E A S
Sbjct: 2    VSTKFELEKFDGRNDFSLWRVKMRALLVHNGVVDALKGEDRLPNELSAKEKKEILEKAHS 61

Query: 61   TMILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDN 120
             +IL L D VLR+V +  +A  +W KL+++Y+ KSL N++ LK+RL+ ++M+S K LE++
Sbjct: 62   AIILSLGDRVLREVSKEASAAGVWAKLETLYMTKSLANRLYLKKRLYTFKMESGKSLEEH 121

Query: 121  LDEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRS 180
             D+F K+ LD+ NI   ++DE++AI+ L SL  SY+     + Y R++L++  VL AL S
Sbjct: 122  TDDFNKLVLDLENIEVTLEDEDKAILFLTSLPSSYESFVDTLMYARETLSMEEVLAALNS 181

Query: 181  KDMETRTQRKE--TEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGH 240
            K+++ +T  KE  ++ L VRGRPENR +         +  RSKSK K  R+CF C+   H
Sbjct: 182  KELKKKTVDKEEGSDGLYVRGRPENRSS----KSFKGSSSRSKSKTKFKRKCFVCNSEKH 241

Query: 241  LIKDCRKLQYKNKHQNKKEGQNSANIHE----SYDST----------------------- 300
            L KDC + + K    +  +   S ++ E     YDS                        
Sbjct: 242  LKKDCPEWKRKKTESSSSKSYTSHSVQEDSSDGYDSADVLSVTWDEVKKHWVMDSGCSFH 301

Query: 301  -------------------------KCSIKGVGSVKLNLMDETHKILSSVRYVPDLKRNL 360
                                      C I G+G++   + + T  +L +VRY+P LKR+L
Sbjct: 302  MTPRREYFKDLKMYSLGTVQLGDDRPCQILGIGTIVFKMNNGTEVVLKNVRYIPSLKRSL 361

Query: 361  ISLGTLDKAG-----------------------QPENGLYTLNGASCVDPANNVVPTQPN 420
            +SLGT ++ G                       + +N +Y L+G+   +  + V+ +   
Sbjct: 362  LSLGTFERDGYHVLLKDGKAKVIKGSLVVLTGTRKDNNIYLLDGSVASNEVSAVI-SDKE 421

Query: 421  NSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHKTQ 480
            N   L WH+RL HVS +GL EL+KQ ++ +  S  + FCE C +GK  RV+F +  H T+
Sbjct: 422  NETTLKWHRRLGHVSSQGLMELKKQQVIKELTSCDVGFCENCIMGKQKRVKFMKGKHNTR 481

Query: 481  GILDYIHSDL---------------------------------KSDVFETFSNWKTLVEN 540
            GILDY+HSDL                                 KS+ F+ F  WK  +EN
Sbjct: 482  GILDYVHSDLWGPARVESLGGARYFMTVIDDFSRRVWVFILKHKSEAFKKFKEWKIYIEN 541

Query: 541  QTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLSRE----------- 600
            QT +KIKK++TDN LE+ ++ F+ +C +SG  +HLTIP TPQQNGL+             
Sbjct: 542  QTERKIKKLRTDNGLEYCNKEFEELCAESGIGRHLTIPGTPQQNGLAERMNRTLLERVRC 601

Query: 601  ------------------------------------------------------------ 660
                                                                        
Sbjct: 602  MRLSAGLPKTFWAEAVKTAAYLINMCPSRAINMKSPMEVWTGEPPNYEDLRVFGTLAFAH 661

Query: 661  --------------------------------EEP------------------------- 720
                                            E P                         
Sbjct: 662  TSQDKLESRAIKCIFLGYQEREKGYRLWKIEGESPRIIKSRNVEFQEKIYYKDVMNGKSS 721

Query: 721  ------------------------QPEDPSNVPVQTSEENLTNYQLTRDRQRRTIRPPSR 780
                                    Q E+   V  +T+ E   +Y L+RDR+RR +  P R
Sbjct: 722  KSVNTSQEDVQIEVETSEIVSSDVQNEESPTVETETTSEQSGDYWLSRDRERRNVIKPLR 781

Query: 781  FEQANCNIEIPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNT 840
            F Q N N+     +A A I  ++  ++E LTY QAI S+ K +W   MQEE++SL+KN T
Sbjct: 782  FRQ-NTNV-----SAVAFITAENECVNEHLTYYQAISSKEKEEWHKAMQEEMSSLIKNKT 841

Query: 841  WALVEKPEEHKLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRY 900
            W LV+KP++ K+V CKW+YK+K  + G    RFKARLVAKG+TQ+ G+DYTEIFSPVV++
Sbjct: 842  WELVKKPKDQKVVACKWIYKIKEGIPGVENRRFKARLVAKGFTQKEGVDYTEIFSPVVKH 901

Query: 901  SSIHVLLSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLY 960
            +SI +LL++ A  DLELEQ+DV TAFLHG L+E+IYM QP GF   G E  VC L +SLY
Sbjct: 902  TSIRILLAITAALDLELEQLDVKTAFLHGYLDEKIYMAQPLGFVEEGSEEKVCLLKRSLY 961

Query: 961  GLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISK 1020
            GLKQSPRQWYK+FD F+ S GF +  YDSCVY +       VYLL+YVDDMLIA +   +
Sbjct: 962  GLKQSPRQWYKRFDEFMTSSGFARSSYDSCVYYREYCPGNYVYLLLYVDDMLIACKHKEQ 1021

Query: 1021 IERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTV 1063
            I+ +K  LKSEFEMK++G A +ILGM + R+R    L + QS Y++KI++ Y +E  K V
Sbjct: 1022 IKEVKELLKSEFEMKELGDAKKILGMEICRDRQLKKLKLTQSAYVKKILENYRMEGCKAV 1081

BLAST of Lag0035349 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 3.9e-184
Identity = 436/1321 (33.01%), Postives = 642/1321 (48.60%), Query Frame = 0

Query: 4    KFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFSTMI 63
            K+E+ KF+G   FS W+++++ +L+Q  + K+L+     P+ +      ++DE A S + 
Sbjct: 5    KYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIR 64

Query: 64   LYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNLDE 123
            L+LSD V+  + + + A  IW +L+S+Y++K+LTNK+ LK++L+   M        +L+ 
Sbjct: 65   LHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNV 124

Query: 124  FVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSKDM 183
            F  +   + N+G KI++E++AI+LLNSL  SY  +   I +G+ ++ L+ V  AL   + 
Sbjct: 125  FNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEK 184

Query: 184  ETRTQRKETEALTVRGR----PENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHL 243
              +    + +AL   GR      +  N  +   R ++K+RSKS+    R C+ C++ GH 
Sbjct: 185  MRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSR---VRNCYNCNQPGHF 244

Query: 244  IKDC-RKLQYKNKHQNKKEGQNSANIHESYDST--------KC----------------- 303
             +DC    + K +   +K   N+A + ++ D+         +C                 
Sbjct: 245  KRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAAS 304

Query: 304  -----------------------------SIKGVGSVKLNLMDETHKILSSVRYVPDLKR 363
                                          I G+G + +        +L  VR+VPDL+ 
Sbjct: 305  HHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRM 364

Query: 364  NLISLGTLDK----------------------AGQPENGLYTLNGASCVDPANNVVPTQP 423
            NLIS   LD+                       G     LY  N   C    N       
Sbjct: 365  NLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELN----AAQ 424

Query: 424  NNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHKT 483
            +     LWHKR+ H+SEKGL  L K+ L+   K  ++  C+ C  GK  RV F  S  + 
Sbjct: 425  DEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERK 484

Query: 484  QGILDYIHSDL---------------------------------KSDVFETFSNWKTLVE 543
              ILD ++SD+                                 K  VF+ F  +  LVE
Sbjct: 485  LNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVE 544

Query: 544  NQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS------------ 603
             +T +K+K++++DN  E+ S  F+  C+  G +   T+P TPQ NG++            
Sbjct: 545  RETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVR 604

Query: 604  ------------------------------------------------------------ 663
                                                                        
Sbjct: 605  SMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFA 664

Query: 664  ---REEEPQPED------------------------------------------------ 723
               +E+  + +D                                                
Sbjct: 665  HVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSE 724

Query: 724  -------PSNVPVQTSEENLTNYQLTRD------------------------------RQ 783
                   P+ V + ++  N T+ + T D                              + 
Sbjct: 725  KVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQG 784

Query: 784  RRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEE 843
                +P  R E+         S  Y LI DD     EP + ++ +    K+Q +  MQEE
Sbjct: 785  EEQHQPLRRSERPRVESRRYPSTEYVLISDD----REPESLKEVLSHPEKNQLMKAMQEE 844

Query: 844  LNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENK-PRFKARLVAKGYTQQYGIDY 903
            + SL KN T+ LVE P+  + + CKW++KLK    G+ K  R+KARLV KG+ Q+ GID+
Sbjct: 845  MESLQKNGTYKLVELPKGKRPLKCKWVFKLKKD--GDCKLVRYKARLVVKGFEQKKGIDF 904

Query: 904  TEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKEN 963
             EIFSPVV+ +SI  +LSL A  DLE+EQ+DV TAFLHG+LEEEIYM QP GFEV GK++
Sbjct: 905  DEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKH 964

Query: 964  SVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDD 1023
             VC+L KSLYGLKQ+PRQWY KFD F++S  ++K   D CVY K  +    + LL+YVDD
Sbjct: 965  MVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDD 1024

Query: 1024 MLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVK 1050
            MLI  +D   I +LK  L   F+MKD+G A QILGM +VR R +  L ++Q  Y+E++++
Sbjct: 1025 MLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLE 1084

BLAST of Lag0035349 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 406.8 bits (1044), Expect = 8.9e-112
Identity = 360/1420 (25.35%), Postives = 609/1420 (42.89%), Query Frame = 0

Query: 3    AKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILE--KPEDLPEPLSEAKRKEMDEIAFS 62
            AK  ++ FDG+  +++W+ +++A+L +  V K+++   P ++ +   +A+R      A S
Sbjct: 4    AKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAER-----CAKS 63

Query: 63   TMILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDN 122
            T+I YLSDS L        A +I + LD++Y  KSL +++ L++RL   ++ S   L  +
Sbjct: 64   TIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSH 123

Query: 123  LDEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIK-YGRDSLTLRLVLDALR 182
               F ++  ++   G KI++ ++   LL +L   Y  I  AI+    ++LTL  V + L 
Sbjct: 124  FHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLL 183

Query: 183  SKDMETRTQRKETEALTVRGRPENRLNTPK----INKRDQNKHRSKSKGKETRECFYCHK 242
             ++++ +    +T    +     N  NT K     N+  + K   K   K   +C +C +
Sbjct: 184  DQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGR 243

Query: 243  SGHLIKDC----RKLQYKNKHQNKKEGQNSAN---------IHESYDSTKCSIKGVGSVK 302
             GH+ KDC    R L  KNK +N+K+ Q + +         ++ +     C         
Sbjct: 244  EGHIKKDCFHYKRILNNKNK-ENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGAS 303

Query: 303  LNLMDETHKILSSVRYVPDLK--------------------------------------R 362
             +L+++      SV  VP LK                                       
Sbjct: 304  DHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAG 363

Query: 363  NLISLGTLDKAGQ-----------PENGLYTLNGASCVD-------PANNVVPTQPNNSE 422
            NL+S+  L +AG             +NGL  +  +  ++        A ++     NN  
Sbjct: 364  NLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPVINFQAYSINAKHKNNFR 423

Query: 423  ALLWHKRLAHVSEKGLAELQKQGL-----LGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 482
              LWH+R  H+S+  L E++++ +     L     +S   CE C  GK AR+ F +   K
Sbjct: 424  --LWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDK 483

Query: 483  T--QGILDYIHSDL---------------------------------KSDVFETFSNWKT 542
            T  +  L  +HSD+                                 KSDVF  F ++  
Sbjct: 484  THIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVA 543

Query: 543  LVENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLSRE------- 602
              E   N K+  +  DN  E+LS   +  C K G   HLT+P+TPQ NG+S         
Sbjct: 544  KSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITE 603

Query: 603  ------------------------------------------------------------ 662
                                                                        
Sbjct: 604  KARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFG 663

Query: 663  ------------------------------------------------------------ 722
                                                                        
Sbjct: 664  ATVYVHIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAV 723

Query: 723  -------EEPQPEDPSNVP------VQTSEEN----LTNYQLTRDRQ-----------RR 782
                   ++ +  +  N P      +QT   N      N Q  +D +           R+
Sbjct: 724  KFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRK 783

Query: 783  TIRPPSRFEQANCN---------------------------------------------- 842
             I+     E   C+                                              
Sbjct: 784  IIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETA 843

Query: 843  ----------------IEIPDSAAYAL-------ICDDDNEISE------------PLTY 902
                            IEI +  +  L         ++DN +++            P ++
Sbjct: 844  EHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSF 903

Query: 903  EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 962
            ++    ++KS W   +  ELN+   NNTW + ++PE   +VD +W++ +K +  G N  R
Sbjct: 904  DEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELG-NPIR 963

Query: 963  FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 1022
            +KARLVA+G+TQ+Y IDY E F+PV R SS   +LSLV Q++L++ QMDV TAFL+G L+
Sbjct: 964  YKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLK 1023

Query: 1023 EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1068
            EEIYMR P G  +    ++VC+L K++YGLKQ+ R W++ F+  ++ C FV    D C+Y
Sbjct: 1024 EEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIY 1083

BLAST of Lag0035349 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 9.0e-80
Identity = 183/510 (35.88%), Postives = 286/510 (56.08%), Query Frame = 0

Query: 545  SEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEH-KLVDCKWLYKLKPSL 604
            SEP T  QA+K E   +W   M  E+N+ + N+TW LV  P  H  +V C+W++  K + 
Sbjct: 954  SEPRTAIQALKDE---RWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNS 1013

Query: 605  KGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTA 664
             G +  R+KARLVAKGY Q+ G+DY E FSPV++ +SI ++L +       + Q+DV  A
Sbjct: 1014 DG-SLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNA 1073

Query: 665  FLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKR 724
            FL G L +++YM QPPGF  + + N VC+L K+LYGLKQ+PR WY +   ++ + GFV  
Sbjct: 1074 FLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNS 1133

Query: 725  KYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILG 784
              D+ +++  +    +VY+L+YVDD+LI   D + +      L   F +KD       LG
Sbjct: 1134 VSDTSLFV-LQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLG 1193

Query: 785  MNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQHFRLSKALSPKSEEERKEM 844
            +     R    L ++Q  Y+  ++ R  +  AK V  P+A   +LS     K  +  +  
Sbjct: 1194 IE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE-- 1253

Query: 845  EHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKGTTNYGL 904
                Y  +VGSL Y +  +RPDI++A++ +S++M    + H +A+K I+RY+ GT N+G+
Sbjct: 1254 ----YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGI 1313

Query: 905  IYSRGSLKDSCLVGYSDADFAADLDKRRSTSGYIFTLFQNTVSWRSHLQSVTALSTTESE 964
               +G+     L  YSDAD+A D D   ST+GYI  L  + +SW S  Q     S+TE+E
Sbjct: 1314 FLKKGNTLS--LHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAE 1373

Query: 965  SISLVEAVNEGTWLTGLVFEL-LGDTNQLSVFSDSQSAIALSKNPQYHDRSKHIDTRYHY 1024
              S+    +E  W+  L+ EL +  T    ++ D+  A  L  NP +H R KHI   YH+
Sbjct: 1374 YRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHF 1433

Query: 1025 LREKTMNEEIKLGKVASANNPTDMLTKPLT 1053
            +R +  +  +++  V++ +   D LTKPL+
Sbjct: 1434 IRNQVQSGALRVVHVSTHDQLADTLTKPLS 1447

BLAST of Lag0035349 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-75
Identity = 192/587 (32.71%), Postives = 310/587 (52.81%), Query Frame = 0

Query: 468  PNTPQQNGLSREEEPQPEDPSNVPVQTSEENLTNYQLTRDRQRRTIRPPSRFEQANCNIE 527
            PN+P  +  S    P P  P+   +Q + +   N      R +  IR P++         
Sbjct: 876  PNSPSSSSTSTPPLP-PVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQ--------- 935

Query: 528  IPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEE 587
               S A +L  +     SEP T  QA+K +   +W   M  E+N+ + N+TW LV  P  
Sbjct: 936  -KYSYATSLAAN-----SEPRTAIQAMKDD---RWRQAMGSEINAQIGNHTWDLVPPPPP 995

Query: 588  H-KLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLS 647
               +V C+W++  K +  G +  R+KARLVAKGY Q+ G+DY E FSPV++ +SI ++L 
Sbjct: 996  SVTIVGCRWIFTKKFNSDG-SLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLG 1055

Query: 648  LVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQ 707
            +       + Q+DV  AFL G L +E+YM QPPGF  + + + VCRL K++YGLKQ+PR 
Sbjct: 1056 VAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRA 1115

Query: 708  WYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQL 767
            WY +   ++ + GFV    D+ +++       ++Y+L+YVDD+LI   D   ++     L
Sbjct: 1116 WYVELRTYLLTVGFVNSISDTSLFVLQRGR-SIIYMLVYVDDILITGNDTVLLKHTLDAL 1175

Query: 768  KSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQHF 827
               F +K+       LG+     R    L ++Q  Y   ++ R  +  AK V  P+A   
Sbjct: 1176 SQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSP 1235

Query: 828  RLSKALSPKSEEERKEMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMSDLGKPHWE 887
            +L+     K  +  +      Y  +VGSL Y +  +RPD+++A++ +S+YM      HW 
Sbjct: 1236 KLTLHSGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWN 1295

Query: 888  AVKWIIRYIKGTTNYGLIYSRGSLKDSCLVGYSDADFAADLDKRRSTSGYIFTLFQNTVS 947
            A+K ++RY+ GT ++G+   +G+     L  YSDAD+A D D   ST+GYI  L  + +S
Sbjct: 1296 ALKRVLRYLAGTPDHGIFLKKGNTLS--LHAYSDADWAGDTDDYVSTNGYIVYLGHHPIS 1355

Query: 948  WRSHLQSVTALSTTESESISLVEAVNEGTWLTGLVFEL-LGDTNQLSVFSDSQSAIALSK 1007
            W S  Q     S+TE+E  S+    +E  W+  L+ EL +  ++   ++ D+  A  L  
Sbjct: 1356 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1415

Query: 1008 NPQYHDRSKHIDTRYHYLREKTMNEEIKLGKVASANNPTDMLTKPLT 1053
            NP +H R KHI   YH++R +  +  +++  V++ +   D LTKPL+
Sbjct: 1416 NPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLS 1430

BLAST of Lag0035349 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 4.7e-36
Identity = 98/317 (30.91%), Postives = 162/317 (51.10%), Query Frame = 0

Query: 658 MDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQS 717
           MDV TAFL+  ++E IY++QPPGF      + V  L   +YGLKQ+P  W +  +  ++ 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 718 CGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGS 777
            GF + + +  +Y +  +    +Y+ +YVDD+L+A+      +R+K +L   + MKD+G 
Sbjct: 61  IGFCRHEGEHGLYFRSTSD-GPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 120

Query: 778 AFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQHFRLSKALSPKSE 837
             + LG+N +     G + ++   Y+ K      +   K    PL     L +  SP  +
Sbjct: 121 VDKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLK 180

Query: 838 EERKEMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKG 897
                 +  PY S+VG L++     RPDI++ +S++SR++ +    H E+ + ++RY+  
Sbjct: 181 ------DITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYT 240

Query: 898 TTNYGLIYSRGSLKDSCLVGYSDADFAADLDKRRSTSGYIFTLFQNTVSWRS-HLQSVTA 957
           T +  L Y  GS     L  Y DA   A  D   ST GY+  L    V+W S  L+ V  
Sbjct: 241 TRSMCLKYRSGS--QLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIP 300

Query: 958 LSTTESESISLVEAVNE 974
           + +TE+E I+  E V E
Sbjct: 301 VPSTEAEYITASETVME 307

BLAST of Lag0035349 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 974.9 bits (2519), Expect = 3.0e-280
Identity = 575/1355 (42.44%), Postives = 766/1355 (56.53%), Query Frame = 0

Query: 2    SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
            S +FE+ KF+G GDFSLWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ST
Sbjct: 3    STRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYST 62

Query: 62   MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
            ++LYLSD VLR VDE     E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63   ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENL 122

Query: 122  DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
            DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYGRDSLT+ +VLDAL+++
Sbjct: 123  DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182

Query: 182  DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
            ++E + +RK+ E L  RGR E      K  K  +   RSKSKGK +R+CF CHK GH  K
Sbjct: 183  NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242

Query: 242  DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
            +C   +  +      N  +G NSA I + YDS +                          
Sbjct: 243  NCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302

Query: 302  -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
                                         C +KG GSV++   D   +IL++VRYVP LK
Sbjct: 303  TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362

Query: 362  RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
            RNLISLG LD++G   + EN                   GLY L G +    A   + + 
Sbjct: 363  RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422

Query: 422  PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
                 ++LWHKRLAHVSE+GL  L +QGLLG  K+V LPFCE C +GKS RV+F +  H 
Sbjct: 423  KVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482

Query: 482  TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
            T+GILDY+HSDL                                 K + F  F  WK  V
Sbjct: 483  TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542

Query: 542  ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
            ENQT +K+K ++TDN LEF++  F   C   G  +H T+  TPQQNGL+           
Sbjct: 543  ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602

Query: 602  ------------------------------------------------------------ 661
                                                                        
Sbjct: 603  RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662

Query: 662  --------------------------------------------------------REEE 721
                                                                    +E++
Sbjct: 663  AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722

Query: 722  PQPE------------------DPSNVPVQTSE--------------------------- 781
             Q                    D  N P   SE                           
Sbjct: 723  KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFI 782

Query: 782  ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
                   +L NYQLTRDR +R    P R+  A       D  AYAL C  D+  +EPLT+
Sbjct: 783  EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842

Query: 842  EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
            E+AI S++K QW   M+EEL SL KN TW+LV KP   KL+  KW+YK+KP   G +KPR
Sbjct: 843  EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902

Query: 902  FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
            +KARLVAKGYTQ+ G+D+ EIFSPVVR+SSI ++LS+   FD+ +EQMDVTTAFLHGELE
Sbjct: 903  YKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELE 962

Query: 962  EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
            E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY +FD FI   GF +  YD+CVY
Sbjct: 963  EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY 1022

Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1066
             K       +YLL+YVDDM++ S+D ++I  LK QL +EFEMKD+G   +ILGM++ R++
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDK 1082

BLAST of Lag0035349 vs. ExPASy TrEMBL
Match: A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)

HSP 1 Score: 902.1 bits (2330), Expect = 2.5e-258
Identity = 549/1345 (40.82%), Postives = 730/1345 (54.28%), Query Frame = 0

Query: 2    SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
            S +FE+ KF+G GDF+LWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ T
Sbjct: 3    STRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYWT 62

Query: 62   MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
            ++LYLSD VLR VDE     E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63   ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENL 122

Query: 122  DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
            DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYG DSLT+ +VLDAL+++
Sbjct: 123  DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKTR 182

Query: 182  DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
            ++E + +RK+ E L  RGR E      K  K  +   RSKSKGK +R+CF CHK GH  K
Sbjct: 183  NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242

Query: 242  DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
            +C   +  +      N  +G NSA I +  DS +                          
Sbjct: 243  NCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302

Query: 302  -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
                                         C +KG GSV++   D   +IL++VRYVP LK
Sbjct: 303  TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362

Query: 362  RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
            RNLISLG LD++G   + EN                   GLY L G +    A   + + 
Sbjct: 363  RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422

Query: 422  PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
               + ++LWHKRLAHVSE+GL  L +QGLLG  K+V LPFCE C +GKS RV+F +  H 
Sbjct: 423  KVTNMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482

Query: 482  TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
            T+GILDYIHSDL                                 K + F  F  WK  V
Sbjct: 483  TKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542

Query: 542  ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
            ENQT +K+K ++TDN LEF++  F   C   G  +H T+  TPQQNGL+           
Sbjct: 543  ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602

Query: 602  ------------------------------------------------------------ 661
                                                                        
Sbjct: 603  RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662

Query: 662  --------------------------------------------------------REEE 721
                                                                    +E++
Sbjct: 663  AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722

Query: 722  PQPE------------------DPSNVPVQTSE--------------------------- 781
             Q                    D  N P   SE                           
Sbjct: 723  KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFI 782

Query: 782  ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
                   +L NYQLTRDR +R    P R+  A       D  AYAL C  D+  +EPLT+
Sbjct: 783  EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842

Query: 842  EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
            E+AI S++K QW   M+EEL SL KN TW+LV KP   KL+  KW+YK+KP   G +KPR
Sbjct: 843  EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902

Query: 902  FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
            +KARL+                            LS+   FD+ +EQMDVTT FLHGELE
Sbjct: 903  YKARLI----------------------------LSIAVHFDMFIEQMDVTTTFLHGELE 962

Query: 962  EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
            E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY  FD FI   GF +  YD+CVY
Sbjct: 963  EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVY 1022

Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1056
             K       +YLL+YVDDM++ S+D + I  LK QL +EFEMKD+G   +ILGM++ R+R
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDR 1082

BLAST of Lag0035349 vs. ExPASy TrEMBL
Match: A0A438FEW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2571 PE=4 SV=1)

HSP 1 Score: 878.2 bits (2268), Expect = 3.9e-251
Identity = 513/1267 (40.49%), Postives = 721/1267 (56.91%), Query Frame = 0

Query: 2    SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
            +AKF++EKF GK DF LWR K++A+LVQ  +   L   ++LP  + E ++ E+ E A S 
Sbjct: 3    TAKFDVEKFTGKNDFGLWRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAHSA 62

Query: 62   MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
            +IL L D+VLR+V +  +A E+W KL+S+Y+ KSL N++  K +L+ ++M  +  +ED+L
Sbjct: 63   IILSLGDTVLREVAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPSMSIEDHL 122

Query: 122  DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
            D F KI LD+ NI   I DE++AI+LL SL  SY  +K AI YGRDSLT   V   L ++
Sbjct: 123  DHFNKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDEVQSILHAR 182

Query: 182  DMETRTQRKET--EALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHL 241
            ++  + + KE   E L +RGR E R       K   +K RSKSK K+ + CF CHK GH 
Sbjct: 183  ELHKQEESKEESGEGLNIRGRSEKR-----EKKGKNSKSRSKSKTKKFK-CFICHKEGHF 242

Query: 242  IKDCRKLQYKNKHQNKKEGQNSANIHESYDSTK--------------CSIKGVGSVKLNL 301
             KDC   +     +   EG ++A I + YDS +              C I G G+V++  
Sbjct: 243  KKDCPDRRQNTVKKTVNEG-DAAVILDGYDSAEVLNVAEVDSGNNKHCKILGTGTVRIKH 302

Query: 302  MDETHKILSSVRYVPDLKRNLISLGTLDKAG-----QP-----------------ENGLY 361
             D   ++L  VRY+P+LKRNLISLG LDK+G     +P                 +NGLY
Sbjct: 303  YDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKGTIKNGLY 362

Query: 362  TLNGASCVDPANNVVPTQPNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCE 421
            TL G +     + V+      ++  LWH+RL H+S +GL EL+KQG+LG  K   LPFCE
Sbjct: 363  TLIGQTVTGKVSTVLKEDVGTTK--LWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCE 422

Query: 422  QCTLGKSARVQFNRSMHKTQGILDYIHSDL-----------KSDVFETFSNWKTLVENQT 481
             C  GK+ RV+F +++H+TQ  LDYIHSDL            S+ F  F  WK LVE QT
Sbjct: 423  HCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGASETFLKFKEWKILVETQT 482

Query: 482  NKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS--------------- 541
            ++K+KK++TDN LEFLS +F ++C K G  +H T+  TPQQNGL+               
Sbjct: 483  SRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCML 542

Query: 542  ------------------------------------------------------------ 601
                                                                        
Sbjct: 543  SSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTK 602

Query: 602  ------------------------------------------------------------ 661
                                                                        
Sbjct: 603  TDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISIDVTFNEQDMSKQTPAKDVEGL 662

Query: 662  -------REEEPQPEDPSNVPVQTSEE------------NLTNYQLTRDRQRRTIRPPSR 721
                     E  QPE       +T++E             L +Y L RDRQ+R ++PP R
Sbjct: 663  DQLQFEVEHETLQPEKSKETSSKTTQEEIVHERQNEPTQGLESYNLVRDRQKRQVKPPKR 722

Query: 722  FEQANCNIEIPDSAAYALICDDDNEISEPLTYEQAIKSENKSQWVTTMQEELNSLMKNNT 781
            + QA       +  A+AL   ++    EP TY++AI S    QWV  +QEE++SL KN T
Sbjct: 723  YGQA-------EMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNET 782

Query: 782  WALVEKPEEHKLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRY 841
            W LV KP++ K+V  KW++K K    G   PR+KARLVAKG++Q+ G+DY EIFSPVV++
Sbjct: 783  WELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKH 842

Query: 842  SSIHVLLSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLY 901
            SSI +LL+ VA  DLEL+Q+DV TAFLHGEL+E IYM+ P GF    K+  VC L KSLY
Sbjct: 843  SSIRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQPPEGFGEGIKDGQVCLLKKSLY 902

Query: 902  GLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISK 961
            GLKQSPRQWYK+FD ++   GF    +D CVY K      +VYLL+YVDDML+A ++   
Sbjct: 903  GLKQSPRQWYKRFDKYMLDIGFNPSSHDGCVYFKLTED-SMVYLLLYVDDMLVACKEKRH 962

Query: 962  IERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTV 1021
            +E++K  LK+EFEMKD+GSA +ILGM + R+R    L ++Q+ Y+ K++ R+ + N KTV
Sbjct: 963  LEQVKEMLKAEFEMKDLGSAKRILGMEIERDRSKRVLRLSQNSYISKVLSRFEMNNVKTV 1022

Query: 1022 CVPLAQHFRLSKALSPKSEEERKEMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMS 1066
              PL QHFRLS   +P++ EE++ ME +PY+S+VGS+MY M CSRPD+A+A+S++SRYMS
Sbjct: 1023 STPLGQHFRLSITQAPETHEEKRFMERIPYASMVGSVMYTMVCSRPDLAYAVSMISRYMS 1082

BLAST of Lag0035349 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 861.3 bits (2224), Expect = 4.9e-246
Identity = 536/1345 (39.85%), Postives = 714/1345 (53.09%), Query Frame = 0

Query: 2    SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
            S +FE+ KF+G GDF+LWRKK++A+LVQ KVAKIL++ E LP+ ++E+++++MDE+A+ST
Sbjct: 3    STRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAYST 62

Query: 62   MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
            ++LYLSD VLR VDE     E+WKKL+S+YL KSL NKI +KE+ FGY+MD +K LE+NL
Sbjct: 63   ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENL 122

Query: 122  DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
            DEF KI +D+ NIGEK+ DENQA+ILLNSL E+Y+E+KAAIKYGRDSLT+ +VLDAL+++
Sbjct: 123  DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182

Query: 182  DMETRTQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKSGHLIK 241
            ++E + +RK+ E L  RGR E      K  K  +   RSKSKGK +R+CF CHK GH  K
Sbjct: 183  NLEIKKERKDGELLMARGRSEK-----KSWKGKERSFRSKSKGK-SRKCFLCHKEGHFKK 242

Query: 242  DC---RKLQYKNKHQNKKEGQNSANIHESYDSTK-------------------------- 301
            +C   +  +      N  +G NSA I + YDS +                          
Sbjct: 243  NCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGC 302

Query: 302  -----------------------------CSIKGVGSVKLNLMDETHKILSSVRYVPDLK 361
                                         C +KG GSV++   D   +IL++VRYVP LK
Sbjct: 303  TFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLK 362

Query: 362  RNLISLGTLDKAG---QPEN-------------------GLYTLNGASCVDPANNVVPTQ 421
            RNLISLG LD++G   + EN                   GLY L G +    A   + + 
Sbjct: 363  RNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSA--AIASG 422

Query: 422  PNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHK 481
                 ++LWHKRLAHVSE+GL  L +QGLLG  K+V LPFCE C +GKS RV+F +  H 
Sbjct: 423  KVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 482

Query: 482  TQGILDYIHSDL---------------------------------KSDVFETFSNWKTLV 541
            T+GILDY+HSDL                                 K + F  F  WK  V
Sbjct: 483  TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQV 542

Query: 542  ENQTNKKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLS----------- 601
            ENQT +K+K ++TDN LEF++  F   C   G  +H T+  TPQQNGL+           
Sbjct: 543  ENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERT 602

Query: 602  ------------------------------------------------------------ 661
                                                                        
Sbjct: 603  RCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAY 662

Query: 662  --------------------------------------------------------REEE 721
                                                                    +E++
Sbjct: 663  AHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQ 722

Query: 722  PQPE------------------DPSNVPVQTSE--------------------------- 781
             Q                    D  N P   SE                           
Sbjct: 723  KQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFI 782

Query: 782  ------ENLTNYQLTRDRQRRTIRPPSRFEQANCNIEIPDSAAYALICDDDNEISEPLTY 841
                   +L NYQLTRDR +R    P R+  A       D  AYAL C  D+  +EPLT+
Sbjct: 783  EESSSNNDLQNYQLTRDRVQRERHAPIRYGYA-------DLVAYALTCAADSIEAEPLTF 842

Query: 842  EQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKGENKPR 901
            E+AI S++K QW   M+EEL SL KN TW+LV KP   KL+  KW+YK+KP   G +KPR
Sbjct: 843  EEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 902

Query: 902  FKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFLHGELE 961
            +KARLVAKGYTQ+ G+D+ EIFSPVVR+SSI ++LS+   FD+ +EQMDVTTAFLHGELE
Sbjct: 903  YKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELE 962

Query: 962  EEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFVKRKYDSCVY 1021
            E IYM QP G+EV+GKE+ VCRL KSLYGLKQSPRQWY +FD FI   GF +  YD+CVY
Sbjct: 963  EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY 1022

Query: 1022 IKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNR 1056
             K       +YLL+YVDDM++ S+D ++I  LK QL +EFEMKD+G   +ILGM++ R++
Sbjct: 1023 WKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDK 1082

BLAST of Lag0035349 vs. ExPASy TrEMBL
Match: A0A2P5YYC3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00016 PE=4 SV=1)

HSP 1 Score: 830.9 bits (2145), Expect = 7.1e-237
Identity = 505/1320 (38.26%), Postives = 704/1320 (53.33%), Query Frame = 0

Query: 2    SAKFELEKFDGKGDFSLWRKKLKAMLVQLKVAKILEKPEDLPEPLSEAKRKEMDEIAFST 61
            S K+++EKF GK  FSLWR K++A+LVQ  + K L   + LP  LSE ++ +M E A S 
Sbjct: 506  STKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQKDDMLERAHSA 565

Query: 62   MILYLSDSVLRQVDEINNAVEIWKKLDSMYLNKSLTNKILLKERLFGYRMDSTKPLEDNL 121
            ++L L D VLR+V +   A  +W +L+S Y+ KSLTN++ LK+RL+  +M+   P+  +L
Sbjct: 566  ILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTPVSQHL 625

Query: 122  DEFVKIFLDVTNIGEKIDDENQAIILLNSLSESYKEIKAAIKYGRDSLTLRLVLDALRSK 181
            D+F  I +D+ NI  KIDDE+QAII+L SL  SY+     + YGRD LTL  V +AL S 
Sbjct: 626  DKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTLEEVKNALSSS 685

Query: 182  DMETR-----TQRKETEALTVRGRPENRLNTPKINKRDQNKHRSKSKGKETRECFYCHKS 241
            ++  +      +  E E L  RGR        K      +K   +S+ K+  +C+YC K 
Sbjct: 686  ELRKKITGKVVENNEGEGLVARGR-------SKAKGGSSSKSHPRSQSKKRIQCYYCKKY 745

Query: 242  GHLIKDCRKLQYKNKHQNKKEGQ-NSANIHESYDST------------------------ 301
            GH+  DC K + K++ Q ++  + N A+   S D+                         
Sbjct: 746  GHMKVDCPKRKEKSESQEQQNDRANVADADSSSDAEIVLAVSDSYAGGRWILDTGATFHI 805

Query: 302  -----------------------KCSIKGVGSVKLNLMDETHKILSSVRYVPDLKRNLIS 361
                                    C + G+G+V++ + D   + L+ VR++P++K+NLIS
Sbjct: 806  STSKDAFSTYEKHSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLIS 865

Query: 362  LGTLDK----------------------AGQPENGLYTLNGASCVDPANNVVPTQPNNSE 421
            L TLDK                       G  E GLY L+G+S    A        ++  
Sbjct: 866  LSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDT 925

Query: 422  ALLWHKRLAHVSEKGLAELQKQGLLGKTKSVSLPFCEQCTLGKSARVQFNRSMHKTQGIL 481
              LWH RL H+SE+GL+ L K+GLL    +  L FCE C  GK  RV+F+  +HKT+G +
Sbjct: 926  TKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTV 985

Query: 482  DYIHSDL---------------------------------KSDVFETFSNWKTLVENQTN 541
            DY HSDL                                 K +V   F  +K L+ENQT 
Sbjct: 986  DYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQTG 1045

Query: 542  KKIKKIQTDNDLEFLSENFKNMCTKSGFQKHLTIPNTPQQNGLSRE-------------- 601
            KKIK+ +TDN LEF S  F   C   G  +H T+  TPQQNG++                
Sbjct: 1046 KKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMRS 1105

Query: 602  ------------------------------EEPQ------PEDPSNV------------- 661
                                          + P+      P D S +             
Sbjct: 1106 NAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGLRVFGCPAYAHVNE 1165

Query: 662  --------------------------PVQTSEENLTNYQLTRDRQ---RRTIRPPSRFE- 721
                                      P   S + + +  +T D     R T     + E 
Sbjct: 1166 GKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEES 1225

Query: 722  ----------QANCNIEIPDSAAYALICDDDNEIS------------------------- 781
                      Q  C ++ P       + DD  E+                          
Sbjct: 1226 DRMGDHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDEDESPQEKPYSIATGRTKRQIK 1285

Query: 782  ---------------------EPLTYEQAIKSENKSQWVTTMQEELNSLMKNNTWALVEK 841
                                 EP +Y +A+  +  +QW   M EE+ SL KN+TW LV+ 
Sbjct: 1286 PNPRYANLVSFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKP 1345

Query: 842  PEEHKLVDCKWLYKLKPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVL 901
            P   K+V CKW++K K  + G    RFKARLVAKG+TQ+ GIDY E+FSPVV++SSI VL
Sbjct: 1346 PSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVL 1405

Query: 902  LSLVAQFDLELEQMDVTTAFLHGELEEEIYMRQPPGFEVRGKENSVCRLLKSLYGLKQSP 961
            L++VA+ DLELEQ+DV TAFLHGELEE IYMRQP GF V GKE+ VC L KSLYGLKQSP
Sbjct: 1406 LAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSP 1465

Query: 962  RQWYKKFDGFIQSCGFVKRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKL 1021
            RQWYK+FD F+   G+ +  YD+CVY +  +    +YLL+YVDDMLIAS+++S+I +LK 
Sbjct: 1466 RQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMSEINKLKS 1525

Query: 1022 QLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQ 1065
            QL  EFEMKD+G+A +ILGM++ R+R AG L ++Q  Y+EK+++R+ ++ AKTV  PLA 
Sbjct: 1526 QLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGMDKAKTVSTPLAP 1585

BLAST of Lag0035349 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 281.2 bits (718), Expect = 4.0e-75
Identity = 185/535 (34.58%), Postives = 301/535 (56.26%), Query Frame = 0

Query: 546  EPLTYEQAIKSENKSQWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKLKPSLKG 605
            EP TY +A   +    W   M +E+ ++   +TW +   P   K + CKW+YK+K +  G
Sbjct: 85   EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 144

Query: 606  ENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDLELEQMDVTTAFL 665
              + R+KARLVAKGYTQQ GID+ E FSPV + +S+ ++L++ A ++  L Q+D++ AFL
Sbjct: 145  TIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 204

Query: 666  HGELEEEIYMRQPPGFEVRGKE----NSVCRLLKSLYGLKQSPRQWYKKFDGFIQSCGFV 725
            +G+L+EEIYM+ PPG+  R  +    N+VC L KS+YGLKQ+ RQW+ KF   +   GFV
Sbjct: 205  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 264

Query: 726  KRKYDSCVYIKYENHVVVVYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQI 785
            +   D   ++K     + + +L+YVDD++I S + + ++ LK QLKS F+++D+G     
Sbjct: 265  QSHSDHTYFLKI-TATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 324

Query: 786  LGMNLVRNRGAGTLVINQSYYLEKIVKRYCLENAKTVCVPLAQHFRLSKALSPKSEEERK 845
            LG+ + R+  AG  +  + Y L+ +      E     C P +     S   S  S  +  
Sbjct: 325  LGLEIARS-AAGINICQRKYALDLLD-----ETGLLGCKPSSVPMDPSVTFSAHSGGDFV 384

Query: 846  EMEHVPYSSVVGSLMYVMTCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKGTTNY 905
            + +   Y  ++G LMY +  +R DI+FA++ +S++       H +AV  I+ YIKGT   
Sbjct: 385  DAK--AYRRLIGRLMY-LQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQ 444

Query: 906  GLIYSRGSLKDSCLVGYSDADFAADLDKRRSTSGYIFTLFQNTVSWRSHLQSVTALSTTE 965
            GL YS  S  +  L  +SDA F +  D RRST+GY   L  + +SW+S  Q V + S+ E
Sbjct: 445  GLFYS--SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 504

Query: 966  SESISLVEAVNEGTWLTGLVFEL-LGDTNQLSVFSDSQSAIALSKNPQYHDRSKHIDTRY 1025
            +E  +L  A +E  WL     EL L  +    +F D+ +AI ++ N  +H+R+KHI++  
Sbjct: 505  AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 564

Query: 1026 HYLREKTMNEEIKLGKVASANNPTDMLTK---PLTAARMMHLIDLLKIMQLGRLL 1073
            H +RE+++  +  L     A +  D  T+   P+    +M+++ +  +  L  L+
Sbjct: 565  HSVRERSV-YQATLSYSFQAYDEQDGFTEYLSPILRGTIMYIVSMFGLAGLEALI 602

BLAST of Lag0035349 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 4.2e-24
Identity = 73/237 (30.80%), Postives = 131/237 (55.27%), Query Frame = 0

Query: 740 VYLLIYVDDMLIASQDISKIERLKLQLKSEFEMKDIGSAFQILGMNLVRNRGAGTLVINQ 799
           +YLL+YVDD+L+     + +  L  QL S F MKD+G     LG+  ++   +G L ++Q
Sbjct: 1   MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQ-IKTHPSG-LFLSQ 60

Query: 800 SYYLEKIVKRYCLENAKTVCVPLAQHFRLSKALSPKSEEERKEMEHVPYSSVVGSLMYVM 859
           + Y E+I+    + + K +  PL    +L+ ++S     +  +     + S+VG+L Y +
Sbjct: 61  TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSD-----FRSIVGALQY-L 120

Query: 860 TCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKGTTNYGLIYSRGSLKDSCLVGYS 919
           T +RPDI++A+++V + M +     ++ +K ++RY+KGT  +GL   + S  +  +  + 
Sbjct: 121 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN--VQAFC 180

Query: 920 DADFAADLDKRRSTSGYIFTLFQNTVSWRSHLQSVTALSTTESESISLVEAVNEGTW 977
           D+D+A     RRST+G+   L  N +SW +  Q   + S+TE+E  +L     E TW
Sbjct: 181 DSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Lag0035349 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 81.6 bits (200), Expect = 4.7e-15
Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0

Query: 316 GQPENGLYTLNGASCVDPANNVVPTQPNNSEALLWHKRLAHVSEKGLAELQKQGLLGKTK 375
           G   + LY L G S     +N+  T     E  LWH RLAH+S++G+  L K+G L  +K
Sbjct: 41  GNRHDSLYILQG-SVETGESNLAETA--KDETRLWHSRLAHMSQRGMELLVKKGFLDSSK 100

Query: 376 SVSLPFCEQCTLGKSARVQFNRSMHKTQGILDYIHSDL 414
             SL FCE C  GK+ RV F+   H T+  LDY+HSDL
Sbjct: 101 VSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDL 135

BLAST of Lag0035349 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-15
Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0

Query: 548 LTYEQAIKSENKS--------QWVTTMQEELNSLMKNNTWALVEKPEEHKLVDCKWLYKL 607
           LT    IK E KS         W   MQEEL++L +N TW LV  P    ++ CKW++K 
Sbjct: 18  LTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKT 77

Query: 608 KPSLKGENKPRFKARLVAKGYTQQYGIDYTEIFSPVVRYSSIHVLLSLVAQFDL 654
           K    G    R KARLVAKG+ Q+ GI + E +SPVVR ++I  +L++  Q ++
Sbjct: 78  KLHSDG-TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130

BLAST of Lag0035349 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-07
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 859 MTCSRPDIAFAMSVVSRYMSDLGKPHWEAVKWIIRYIKGTTNYGLIYSRGSLKDSCLVGY 918
           +T +RPD+ FA++ +S++ S       +AV  ++ Y+KGT   GL YS  S  D  L  +
Sbjct: 3   LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATS--DLQLKAF 62

Query: 919 SDADFAADLDKRRSTSGY 937
           +D+D+A+  D RRS +G+
Sbjct: 63  ADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0050719.16.3e-28042.44putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0047995.15.2e-25840.82retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa... [more]
RVW58503.18.0e-25140.49Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
TYK25306.11.0e-24539.85putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAF5775409.11.6e-23838.19putative RNA-directed DNA polymerase [Helianthus annuus][more]
Match NameE-valueIdentityDescription
P109783.9e-18433.01Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041468.9e-11225.35Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q94HW29.0e-8035.88Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.8e-7532.71Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P256004.7e-3630.91Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A5A7UB253.0e-28042.44Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A5A7U2U72.5e-25840.82Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku... [more]
A0A438FEW03.9e-25140.49Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A5D3DNU14.9e-24639.85Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A2P5YYC37.1e-23738.26Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00016 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT4G23160.14.0e-7534.58cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.14.2e-2430.80DNA/RNA polymerases superfamily protein [more]
ATMG00300.14.7e-1543.88Gag-Pol-related retrotransposon family protein [more]
ATMG00820.16.1e-1541.23Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00240.11.2e-0737.18Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 229..245
e-value: 0.0052
score: 25.3
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 230..245
score: 9.240648
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 52..184
e-value: 1.0E-29
score: 103.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 463..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1124..1140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1183..1206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 463..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1183..1220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1124..1153
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 535..973
coord: 3..262
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 916..1053
e-value: 2.03319E-58
score: 195.38
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 576..822
e-value: 5.1E-72
score: 242.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 404..478
e-value: 1.8E-9
score: 39.6
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 321..390
e-value: 3.2E-14
score: 52.5
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 575..1021
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 413..476
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 210..249

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035349.1Lag0035349.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding