Lag0035297 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035297
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUBN2_3 domain-containing protein
Locationchr3: 18299114 .. 18300631 (-)
RNA-Seq ExpressionLag0035297
SyntenyLag0035297
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACACTGACTTCAGCTAATCCCTCTGCTTCCAGCATTGATGGATCAGAGGCACAGAACTCTCGGAGTCCTTATTTCCTACACCACAGTGATACTTCGAATCTGGTACTTGTCTCTGAACTTCTTACTGATGAGAATTACGTACCTTGGAGTTGATCGATGGTGTTGGCGCTTTCAATCAAGAACAAATTAGGTTTCATAGATGGATCAATAGTTAAACCTAGTGGACAGCTCTTGCCGCTTTGGGCGAGGAATAATAATATTGTGATAGCATGGATCTTGAATTCAGTATCGAAAAGTATATCATCGAGCATCCTGTGCACCGATTCAGCCCAGACAATCTGGCTTGATCTTAAGGATCGGTTTGCCAAGAAGAATGGACCTCGAATCTTCCACCTCAAGCAAGAAATGAGCACTCTCCGCCAAGAACAACAAGCGGTAACCATGTACTATGCCAAACTCAAGAGCCTCTGGGATGAATATGTGACTTTTCGACCTGGATGTACTTGTGGTGCCTGTACTTGTGGAGGAATGCAATCAATTAAAACATTCTTCCAATTCGAGCATCTGCTTAATTTCCTAATGGGACTCAATGATATTTATGGGCATTCATGACCGCAGATTCTATTGATGGATCCACCCCCTGCTGTGAACAAAGCTTTTTCCCTAATTGTCCAAGAAGAAGAGCAACACGTTCATCTTCCAATTGTCCAAATTGAATTTGTTCACACGAGACTTCGGGGACGGAGACACGTGGAATAAACAATATATTTGTATTTATGTAATATGCGTGTGGGTGTACAATCTCTAACTTTAATCCTCTGATTCTCTCTCTTAAATATATAAACTTTGGTCTCTAGCTTCTTAATCTTCTTGGGCTGGTTTGTTGAGCTTCTTGGATGATCGGCTTGCTAGGTTGATGATCTCTTGGATCGGCCTGTTGGCTTGATGATCTTTTTGGATGATCGGCCTGCTGGCTTAATGATCTCTTGGATCGGCCTGTTGTGACTTATTGATCTTCTTGGATGATCGGCATGTTGGCTTGTTGATCTTCTTGGATGATCAGTCTACTGGCTTAATGATCTGTTCGATCGGTTGGCTTGTTGATCTTCTTGGATGATCGGCCTGCTGACTTGTTGATCTTCTTGATCGGTCGGTTGGCTTGTTGATCTCTTGGATGATCGGCCTGCTGACTTGTTGATCTTCTTGATCGGTCAGTTGGCTTGTTGATCTCTTGGATCAGCCTGTTGGCTTGATGATCTGTTGGATCGGCTTGTTAGCTTGTTGATCCTCTTGGATGATCGGCCTGCTGACTTGTTTATCTTCTTGATCGGTCGGTTGGCTTGTTGATCTCTTTTTAGAGTCTTCTAGTAATCAAACCTTCTGAGTCTTGAGTTGGTTGAATTCTGAATCTTGGATCTTCTGAATTCTCTAGACTCTCTGACTTCTAATGACTCTGGACTCTGGCAGAATTCTCTGGACTATGAGTTCTCTGATCTGAATCTCCGAATCTGA

mRNA sequence

ATGGATACACTGACTTCAGCTAATCCCTCTGCTTCCAGCATTGATGGATCAGAGGCACAGAACTCTCGGAGTCCTTATTTCCTACACCACAGTGATACTTCGAATCTGAACAAATTAGGTTTCATAGATGGATCAATAGTTAAACCTAGTGGACAGCTCTTGCCGCTTTGGGCGAGGAATAATAATATTGTGATAGCATGGATCTTGAATTCAGTATCGAAAAGTATATCATCGAGCATCCTGTGCACCGATTCAGCCCAGACAATCTGGCTTGATCTTAAGGATCGGTTTGCCAAGAAGAATGGACCTCGAATCTTCCACCTCAAGCAAGAAATGAGCACTCTCCGCCAAGAACAACAAGCGGTAACCATGTACTATGCCAAACTCAAGAGCCTCTGGGATGAATATGTGACTTTTCGACCTGGATGTACTTGTGGTGCCTCCTGTTGGCTTGATGATCTGTTGGATCGGCTTGTTAGCTTGTTGATCCTCTTGGATGATCGGCCTGCTGACTTGTTTATCTTCTTGATCGACTCTCTGACTTCTAATGACTCTGGACTCTGGCAGAATTCTCTGGACTATGAGTTCTCTGATCTGAATCTCCGAATCTGA

Coding sequence (CDS)

ATGGATACACTGACTTCAGCTAATCCCTCTGCTTCCAGCATTGATGGATCAGAGGCACAGAACTCTCGGAGTCCTTATTTCCTACACCACAGTGATACTTCGAATCTGAACAAATTAGGTTTCATAGATGGATCAATAGTTAAACCTAGTGGACAGCTCTTGCCGCTTTGGGCGAGGAATAATAATATTGTGATAGCATGGATCTTGAATTCAGTATCGAAAAGTATATCATCGAGCATCCTGTGCACCGATTCAGCCCAGACAATCTGGCTTGATCTTAAGGATCGGTTTGCCAAGAAGAATGGACCTCGAATCTTCCACCTCAAGCAAGAAATGAGCACTCTCCGCCAAGAACAACAAGCGGTAACCATGTACTATGCCAAACTCAAGAGCCTCTGGGATGAATATGTGACTTTTCGACCTGGATGTACTTGTGGTGCCTCCTGTTGGCTTGATGATCTGTTGGATCGGCTTGTTAGCTTGTTGATCCTCTTGGATGATCGGCCTGCTGACTTGTTTATCTTCTTGATCGACTCTCTGACTTCTAATGACTCTGGACTCTGGCAGAATTCTCTGGACTATGAGTTCTCTGATCTGAATCTCCGAATCTGA

Protein sequence

MDTLTSANPSASSIDGSEAQNSRSPYFLHHSDTSNLNKLGFIDGSIVKPSGQLLPLWARNNNIVIAWILNSVSKSISSSILCTDSAQTIWLDLKDRFAKKNGPRIFHLKQEMSTLRQEQQAVTMYYAKLKSLWDEYVTFRPGCTCGASCWLDDLLDRLVSLLILLDDRPADLFIFLIDSLTSNDSGLWQNSLDYEFSDLNLRI
Homology
BLAST of Lag0035297 vs. NCBI nr
Match: XP_038895765.1 (uncharacterized protein LOC120083929 [Benincasa hispida])

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-41
Identity = 87/149 (58.39%), Postives = 108/149 (72.48%), Query Frame = 0

Query: 24  SPYFLHHSDTSNL--------------------------NKLGFIDGSIVKPSGQLLPLW 83
           +PY LHHSDTSNL                          NKLGFIDGS+ +P+G LL LW
Sbjct: 34  TPYALHHSDTSNLVLVSELLTDDNYVSWSRSMVLTLFIQNKLGFIDGSLPRPTGDLLHLW 93

Query: 84  ARNNNIVIAWILNSVSKSISSSILCTDSAQTIWLDLKDRFAKKNGPRIFHLKQEMSTLRQ 143
             NNN+V++WIL SVSKSISSSIL T+SAQ IWLDL+D F ++NGPRIFHLK+E+S+L+Q
Sbjct: 94  IHNNNVVVSWILKSVSKSISSSILFTESAQAIWLDLQDCFQRRNGPRIFHLKRELSSLKQ 153

Query: 144 EQQAVTMYYAKLKSLWDEYVTFRPGCTCG 147
           +Q +VTMY+ K+KS  DEYV++RPGCTCG
Sbjct: 154 DQDSVTMYFTKMKSFCDEYVSYRPGCTCG 182

BLAST of Lag0035297 vs. NCBI nr
Match: KAA0032807.1 (UBN2_3 domain-containing protein [Cucumis melo var. makuwa] >TYK30365.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-39
Identity = 86/152 (56.58%), Postives = 104/152 (68.42%), Query Frame = 0

Query: 21  NSRSPYFLHHSDTSNL--------------------------NKLGFIDGSIVKPSGQLL 80
           +S SPY L+HSDTSNL                          NKLGFID  I KP+G+LL
Sbjct: 48  SSNSPYILNHSDTSNLILVTELVTDNNYVIWSRSMVLAVSIPNKLGFIDVLITKPAGELL 107

Query: 81  PLWARNNNIVIAWILNSVSKSISSSILCTDSAQTIWLDLKDRFAKKNGPRIFHLKQEMST 140
           PLW  NNN+VIAWILNS SK I SSIL T SA+  W+DL+D F K+NGPRIF LK  +ST
Sbjct: 108 PLWIWNNNVVIAWILNSTSKGILSSILSTQSARATWIDLQDCFQKRNGPRIFQLKCGLST 167

Query: 141 LRQEQQAVTMYYAKLKSLWDEYVTFRPGCTCG 147
           L+Q+Q++VTMY+A +KSLWDEY ++ PGCTCG
Sbjct: 168 LKQDQESVTMYFANIKSLWDEYASYHPGCTCG 199

BLAST of Lag0035297 vs. NCBI nr
Match: XP_008457013.1 (PREDICTED: uncharacterized protein LOC103496792 [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-39
Identity = 86/152 (56.58%), Postives = 104/152 (68.42%), Query Frame = 0

Query: 21  NSRSPYFLHHSDTSNL--------------------------NKLGFIDGSIVKPSGQLL 80
           +S SPY L+HSDTSNL                          NKLGFID  I KP+G+LL
Sbjct: 48  SSNSPYILNHSDTSNLILVTELVTDNNYVIWSRSMVLAVSIQNKLGFIDVLITKPAGELL 107

Query: 81  PLWARNNNIVIAWILNSVSKSISSSILCTDSAQTIWLDLKDRFAKKNGPRIFHLKQEMST 140
           PLW  NNN+VIAWILNS SK I SSIL T SA+  W+DL+D F K+NGPRIF LK  +ST
Sbjct: 108 PLWIWNNNVVIAWILNSTSKGILSSILFTQSARATWIDLQDCFQKRNGPRIFQLKCGLST 167

Query: 141 LRQEQQAVTMYYAKLKSLWDEYVTFRPGCTCG 147
           L+Q+Q++VTMY+A +KSLWDEY ++ PGCTCG
Sbjct: 168 LKQDQESVTMYFANIKSLWDEYASYHPGCTCG 199

BLAST of Lag0035297 vs. NCBI nr
Match: XP_022154973.1 (uncharacterized protein LOC111022117 [Momordica charantia])

HSP 1 Score: 169.1 bits (427), Expect = 4.0e-38
Identity = 83/159 (52.20%), Postives = 111/159 (69.81%), Query Frame = 0

Query: 28  LHHSDTSNL--------------------------NKLGFIDGSIVKPSGQLLPLWARNN 87
           +HH+DTSNL                          NKLGFI+GS+ KP+G LLP+W RN 
Sbjct: 1   MHHNDTSNLVLVSKPLTNSNYVSWSRSMTIALSIKNKLGFINGSLPKPAGDLLPVWIRNK 60

Query: 88  NIVIAWILNSVSKSISSSILCTDSAQTIWLDLKDRFAKKNGPRIFHLKQEMSTLRQEQQA 147
           ++VIAW LNSVSK IS+S++ T+S   IWLDLKDRF  +NGP+IF L+++++TL Q+Q +
Sbjct: 61  HVVIAWFLNSVSKPISASLIFTNSTHEIWLDLKDRFQLQNGPQIFQLRRDLATLTQDQLS 120

Query: 148 VTMYYAKLKSLWDEYVTFRPGCTCGA-SCWLDDLLDRLV 160
           VTMYY KLK+LWDEYV++RPGCTCG+ SC    L+++ V
Sbjct: 121 VTMYYTKLKALWDEYVSYRPGCTCGSCSCGGYRLVEKFV 159

BLAST of Lag0035297 vs. NCBI nr
Match: XP_022154608.1 (uncharacterized protein LOC111021831 [Momordica charantia])

HSP 1 Score: 161.4 bits (407), Expect = 8.3e-36
Identity = 83/171 (48.54%), Postives = 114/171 (66.67%), Query Frame = 0

Query: 1   MDTLTSANPSASSIDGSEAQNSRSPYFLHHSDTSNL------------------------ 60
           +D  +S N S+SS+ G    +  +PY+LHH+D + L                        
Sbjct: 20  LDDSSSPN-SSSSVSG--VDSVLNPYYLHHTDNTELVLVTQPLTEENYSSWSRSMLIALS 79

Query: 61  --NKLGFIDGSIVKPSGQLLPLWARNNNIVIAWILNSVSKSISSSILCTDSAQTIWLDLK 120
             NKLGFIDGSI +P G+LLP W  NN++VIAWILNSVSK ISSSIL ++SA+ IW+DLK
Sbjct: 80  IKNKLGFIDGSISRPIGELLPAWIHNNHVVIAWILNSVSKEISSSILFSESARDIWIDLK 139

Query: 121 DRFAKKNGPRIFHLKQEMSTLRQEQQAVTMYYAKLKSLWDEYVTFRPGCTC 146
           +RF K NGPRIF LK++++ L Q QQ+V++Y+ KLK++WDE + +RP C+C
Sbjct: 140 ERFEKSNGPRIFQLKRDLAQLWQNQQSVSLYFTKLKAVWDELIQYRPLCSC 187

BLAST of Lag0035297 vs. ExPASy TrEMBL
Match: A0A5A7SU21 (UBN2_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00310 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 7.8e-40
Identity = 86/152 (56.58%), Postives = 104/152 (68.42%), Query Frame = 0

Query: 21  NSRSPYFLHHSDTSNL--------------------------NKLGFIDGSIVKPSGQLL 80
           +S SPY L+HSDTSNL                          NKLGFID  I KP+G+LL
Sbjct: 48  SSNSPYILNHSDTSNLILVTELVTDNNYVIWSRSMVLAVSIPNKLGFIDVLITKPAGELL 107

Query: 81  PLWARNNNIVIAWILNSVSKSISSSILCTDSAQTIWLDLKDRFAKKNGPRIFHLKQEMST 140
           PLW  NNN+VIAWILNS SK I SSIL T SA+  W+DL+D F K+NGPRIF LK  +ST
Sbjct: 108 PLWIWNNNVVIAWILNSTSKGILSSILSTQSARATWIDLQDCFQKRNGPRIFQLKCGLST 167

Query: 141 LRQEQQAVTMYYAKLKSLWDEYVTFRPGCTCG 147
           L+Q+Q++VTMY+A +KSLWDEY ++ PGCTCG
Sbjct: 168 LKQDQESVTMYFANIKSLWDEYASYHPGCTCG 199

BLAST of Lag0035297 vs. ExPASy TrEMBL
Match: A0A1S3C5T4 (uncharacterized protein LOC103496792 OS=Cucumis melo OX=3656 GN=LOC103496792 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 86/152 (56.58%), Postives = 104/152 (68.42%), Query Frame = 0

Query: 21  NSRSPYFLHHSDTSNL--------------------------NKLGFIDGSIVKPSGQLL 80
           +S SPY L+HSDTSNL                          NKLGFID  I KP+G+LL
Sbjct: 48  SSNSPYILNHSDTSNLILVTELVTDNNYVIWSRSMVLAVSIQNKLGFIDVLITKPAGELL 107

Query: 81  PLWARNNNIVIAWILNSVSKSISSSILCTDSAQTIWLDLKDRFAKKNGPRIFHLKQEMST 140
           PLW  NNN+VIAWILNS SK I SSIL T SA+  W+DL+D F K+NGPRIF LK  +ST
Sbjct: 108 PLWIWNNNVVIAWILNSTSKGILSSILFTQSARATWIDLQDCFQKRNGPRIFQLKCGLST 167

Query: 141 LRQEQQAVTMYYAKLKSLWDEYVTFRPGCTCG 147
           L+Q+Q++VTMY+A +KSLWDEY ++ PGCTCG
Sbjct: 168 LKQDQESVTMYFANIKSLWDEYASYHPGCTCG 199

BLAST of Lag0035297 vs. ExPASy TrEMBL
Match: A0A6J1DLQ9 (uncharacterized protein LOC111022117 OS=Momordica charantia OX=3673 GN=LOC111022117 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.9e-38
Identity = 83/159 (52.20%), Postives = 111/159 (69.81%), Query Frame = 0

Query: 28  LHHSDTSNL--------------------------NKLGFIDGSIVKPSGQLLPLWARNN 87
           +HH+DTSNL                          NKLGFI+GS+ KP+G LLP+W RN 
Sbjct: 1   MHHNDTSNLVLVSKPLTNSNYVSWSRSMTIALSIKNKLGFINGSLPKPAGDLLPVWIRNK 60

Query: 88  NIVIAWILNSVSKSISSSILCTDSAQTIWLDLKDRFAKKNGPRIFHLKQEMSTLRQEQQA 147
           ++VIAW LNSVSK IS+S++ T+S   IWLDLKDRF  +NGP+IF L+++++TL Q+Q +
Sbjct: 61  HVVIAWFLNSVSKPISASLIFTNSTHEIWLDLKDRFQLQNGPQIFQLRRDLATLTQDQLS 120

Query: 148 VTMYYAKLKSLWDEYVTFRPGCTCGA-SCWLDDLLDRLV 160
           VTMYY KLK+LWDEYV++RPGCTCG+ SC    L+++ V
Sbjct: 121 VTMYYTKLKALWDEYVSYRPGCTCGSCSCGGYRLVEKFV 159

BLAST of Lag0035297 vs. ExPASy TrEMBL
Match: A0A6J1DKR8 (uncharacterized protein LOC111021831 OS=Momordica charantia OX=3673 GN=LOC111021831 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 4.0e-36
Identity = 83/171 (48.54%), Postives = 114/171 (66.67%), Query Frame = 0

Query: 1   MDTLTSANPSASSIDGSEAQNSRSPYFLHHSDTSNL------------------------ 60
           +D  +S N S+SS+ G    +  +PY+LHH+D + L                        
Sbjct: 20  LDDSSSPN-SSSSVSG--VDSVLNPYYLHHTDNTELVLVTQPLTEENYSSWSRSMLIALS 79

Query: 61  --NKLGFIDGSIVKPSGQLLPLWARNNNIVIAWILNSVSKSISSSILCTDSAQTIWLDLK 120
             NKLGFIDGSI +P G+LLP W  NN++VIAWILNSVSK ISSSIL ++SA+ IW+DLK
Sbjct: 80  IKNKLGFIDGSISRPIGELLPAWIHNNHVVIAWILNSVSKEISSSILFSESARDIWIDLK 139

Query: 121 DRFAKKNGPRIFHLKQEMSTLRQEQQAVTMYYAKLKSLWDEYVTFRPGCTC 146
           +RF K NGPRIF LK++++ L Q QQ+V++Y+ KLK++WDE + +RP C+C
Sbjct: 140 ERFEKSNGPRIFQLKRDLAQLWQNQQSVSLYFTKLKAVWDELIQYRPLCSC 187

BLAST of Lag0035297 vs. ExPASy TrEMBL
Match: A0A7J0FKC9 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein OS=Actinidia rufa OX=165716 GN=Acr_13g0000100 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 4.1e-33
Identity = 80/166 (48.19%), Postives = 101/166 (60.84%), Query Frame = 0

Query: 10  SASSIDGSEAQNSRSPYFLHHSDTSNL--------------------------NKLGFID 69
           S SSI+     +  SPYFLHHSD   L                          NKLGFID
Sbjct: 255 SRSSINKLATDDPSSPYFLHHSDGPELVLVSQSLTGDNYASWNRAMIIALSVKNKLGFID 314

Query: 70  GSIVKPSG---QLLPLWARNNNIVIAWILNSVSKSISSSILCTDSAQTIWLDLKDRFAKK 129
           GSI KP G    LL  W RNNN+VI+WILNSVSK IS+SI+ + SA  IW+DLKDRF + 
Sbjct: 315 GSITKPEGNDTNLLNSWIRNNNVVISWILNSVSKEISASIIFSASANEIWIDLKDRFQQS 374

Query: 130 NGPRIFHLKQEMSTLRQEQQAVTMYYAKLKSLWDEYVTFRPGCTCG 147
           NGPRIF L++E+    Q+Q  V++Y+ KLK++W+E   +RP C+CG
Sbjct: 375 NGPRIFQLRRELMNHVQDQSPVSVYFTKLKTIWEELNNYRPACSCG 420

BLAST of Lag0035297 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 37/113 (32.74%), Postives = 63/113 (55.75%), Query Frame = 0

Query: 38  KLGFIDGSIVKPS--GQLLPLWARNNNIVIAWILNSVSKSISSSILCTDSAQTIWLDLKD 97
           K GFIDG++ KP     L   W + N +V+ W++NS++  +  S++  ++A  +W DL+ 
Sbjct: 58  KFGFIDGTLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRR 117

Query: 98  RFAKKNGPRIFHLKQEMSTLRQEQQAVTMYYAKLKSLWDEYVTFR--PGCTCG 147
            F      +I+ L++ ++TLRQ   +V  Y+ KL  +W E   +   P C CG
Sbjct: 118 VFVPCVDLKIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSEYAPIPECKCG 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038895765.12.2e-4158.39uncharacterized protein LOC120083929 [Benincasa hispida][more]
KAA0032807.11.6e-3956.58UBN2_3 domain-containing protein [Cucumis melo var. makuwa] >TYK30365.1 UBN2_3 d... [more]
XP_008457013.12.1e-3956.58PREDICTED: uncharacterized protein LOC103496792 [Cucumis melo][more]
XP_022154973.14.0e-3852.20uncharacterized protein LOC111022117 [Momordica charantia][more]
XP_022154608.18.3e-3648.54uncharacterized protein LOC111021831 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SU217.8e-4056.58UBN2_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3C5T41.0e-3956.58uncharacterized protein LOC103496792 OS=Cucumis melo OX=3656 GN=LOC103496792 PE=... [more]
A0A6J1DLQ91.9e-3852.20uncharacterized protein LOC111022117 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DKR84.0e-3648.54uncharacterized protein LOC111021831 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A7J0FKC94.1e-3348.19Haloacid dehalogenase-like hydrolase (HAD) superfamily protein OS=Actinidia rufa... [more]
Match NameE-valueIdentityDescription
AT1G21280.11.2e-1332.74CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 66..136
e-value: 1.3E-10
score: 41.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR37610:SF53SUBFAMILY NOT NAMEDcoord: 37..150
NoneNo IPR availablePANTHERPTHR37610FAMILY NOT NAMEDcoord: 37..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035297.1Lag0035297.1mRNA