Lag0035263 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035263
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H
Locationchr3: 17669877 .. 17671686 (-)
RNA-Seq ExpressionLag0035263
SyntenyLag0035263
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAGGCCGAGCAGAAGCTCAATCGCAAAAAGGCCCACGAAAGTTCACCGCTAAAGACAGCGCCAGTTACGTACACAGGAAATAATGATAGGAAAAAGTCAGAGGCTCGGGCAAAGTCAGAGGCTCGGGCAAAGTCCGAGGCCGAGCATTTGTTACGCAATTTCTAGGAGCCCAGAACCGACAGAAGCCTCAGATCAACTCGTTGACAGTAAAGCAGGGGCTTCGAGAAAGCTTGAAGGATTGTATTAACAGATTTTGTAATGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTGCCTTGACTGCTATGATTTCAGGTTTGTAGGATGAAAGACTGCTCAACTCGATCAGCAAGAGCAGTCCTTGGCCAAAGGCCGAGGCCGACCAGAGGCCAAGGAGCCACAGGGCTGTGCGGAACCAAGAAGCCAGATTCGACAGGTATACACCGCTAACAGCTTCCTTTGCACAGGTCTTGGCCGCAATACAGGACACAAATTTGTTGAAACGCCCAGAAAAGTTGAGATCAGACCCCGATAGGAAGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACTCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAAAAGGTTACCCCAAGGGGTTCGTTGGGAATGACAAAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCTGCTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAGTTATCCCCTTCCAATGAAACGTTGATCGATTTTCTTTCATTTCAATAGCATATTACTCAGGAATGTAATTGATTCATTTGAAATAAATTACTCTGAATTTTGTTTCAAAAGTTTTGACAGCGCTTGCAGAGAGACTCGGGAGATTCCCAGGCCTCCCAAAGCTTTTCCCCAGAGGAGTGTACGCACCCCTGGGAAGACCACAACACTTGACCTGTTATCGTAGCCGAAGCGGTTCAAGCCGAAAGGGAGATGATCTGCACATAAGTCGAGTCACGGGCTGAGTGCGCAGATGACACAGAGGAGTTGGTCGGCCTCATGCCAAGGCTGAGGCCGACCACCTAGAGGCTAAGGCCAAACACCACCTTCAAGAGCTCGGTCACGAAGTAAGTCTTTCCTTACTCAAAAAATGCATATTTTGCGTATTGAATACATGTTTTTGAGTGGGGGACTGGGAATAATCATGGTCGTTAGTTATATTGCAATGATTTTTTCATGGCTATATTTCCAAGCTTCAAGCTTTTGACAACAGTTTCTTCCCTTAAAATACTTTGTTGCTTGATATGCCATCAAAATTATGTGGAAATATGATAGAAGGCAGTTTGAGCATACATTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACTAGGCAGCTTGAAGAGAGGCTTGGGGAATTCCTAGGCATCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAACTTCCCAGACCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGGCCACGACGCTTGAAGAGAGGCCCTGGAAAATTCCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACGACGATGCTTGA

mRNA sequence

ATGGCCGAGGCCGAGCAGAAGCTCAATCGCAAAAAGGCCCACGAAAGTTCACCGCTAAAGACAGCGCCAGATGAAAGACTGCTCAACTCGATCAGCAAGAGCAGTCCTTGGCCAAAGGCCGAGGCCGACCAGAGGCCAAGGAGCCACAGGGCTGTGCGGAACCAAGAAGCCAGATTCGACAGGTATACACCGCTAACAGCTTCCTTTGCACAGGTCTTGGCCGCAATACAGGACACAAATTTGTTGAAACGCCCAGAAAAGTTGAGATCAGACCCCGATAGGAAGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACTCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAAAAGGTTACCCCAAGGGGTTCGTTGGGAATGACAAAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCTGCTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGCGCTTGCAGAGAGACTCGGGAGATTCCCAGGCCTCCCAAAGCTTTTCCCCAGAGGAGTGTACGCACCCCTGGGAAGACCACAACACTTGACCTGTTATCAGGAGTTGGTCGGCCTCATGCCAAGGCTGAGGCCGACCACCTAGAGGCTAAGGCCAAACACCACCTTCAAGAGCTCGGTCACGAAAAGAGTGTACGCACCCCTGGGATGACTAGGCAGCTTGAAGAGAGGCTTGGGGAATTCCTAGGCATCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAACTTCCCAGACCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGGCCACGACGCTTGAAGAGAGGCCCTGGAAAATTCCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACGACGATGCTTGA

Coding sequence (CDS)

ATGGCCGAGGCCGAGCAGAAGCTCAATCGCAAAAAGGCCCACGAAAGTTCACCGCTAAAGACAGCGCCAGATGAAAGACTGCTCAACTCGATCAGCAAGAGCAGTCCTTGGCCAAAGGCCGAGGCCGACCAGAGGCCAAGGAGCCACAGGGCTGTGCGGAACCAAGAAGCCAGATTCGACAGGTATACACCGCTAACAGCTTCCTTTGCACAGGTCTTGGCCGCAATACAGGACACAAATTTGTTGAAACGCCCAGAAAAGTTGAGATCAGACCCCGATAGGAAGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACTCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAAAAGGTTACCCCAAGGGGTTCGTTGGGAATGACAAAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCTGCTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGCGCTTGCAGAGAGACTCGGGAGATTCCCAGGCCTCCCAAAGCTTTTCCCCAGAGGAGTGTACGCACCCCTGGGAAGACCACAACACTTGACCTGTTATCAGGAGTTGGTCGGCCTCATGCCAAGGCTGAGGCCGACCACCTAGAGGCTAAGGCCAAACACCACCTTCAAGAGCTCGGTCACGAAAAGAGTGTACGCACCCCTGGGATGACTAGGCAGCTTGAAGAGAGGCTTGGGGAATTCCTAGGCATCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAACTTCCCAGACCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGGCCACGACGCTTGAAGAGAGGCCCTGGAAAATTCCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACGACGATGCTTGA

Protein sequence

MAEAEQKLNRKKAHESSPLKTAPDERLLNSISKSSPWPKAEADQRPRSHRAVRNQEARFDRYTPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSALGDGRGRAFEGACRETREIPRPPKAFPQRSVRTPGKTTTLDLLSGVGRPHAKAEADHLEAKAKHHLQELGHEKSVRTPGMTRQLEERLGEFLGIPKLFPQKSVRTPGMTTMLEERLGNFPDLPKLFPQKSVRTPGMATTLEERPWKIPRPPQAFSPEECTHPWDDDDA
Homology
BLAST of Lag0035263 vs. NCBI nr
Match: XP_030950020.1 (uncharacterized protein LOC115973918 [Quercus lobata])

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-20
Identity = 60/162 (37.04%), Postives = 83/162 (51.23%), Query Frame = 0

Query: 39  KAEADQRPRSHRAVRNQEARFDRYTPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKN 98
           K   D+R            R  +YTPL A   QVL  I+D   LK PEKL+ DP+++N+N
Sbjct: 17  KGRTDERRDRESKKPGLPVRNQQYTPLNAPLEQVLMQIKDDPSLKWPEKLKGDPNKRNRN 76

Query: 99  KYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFEI 158
           KYC FH DHGH T EC  L+ +IE LIR+G  +GF+G D+                L EI
Sbjct: 77  KYCRFHRDHGHNTDECFDLKQQIENLIRQGKLRGFLGRDQRDEKQKGKMEDSSRPPLGEI 136

Query: 159 QTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSAL 201
           + I+GGSS       G    S++ Y   + N+    ++  A+
Sbjct: 137 RVIIGGSST------GRSSKSKKAYLKVVQNVQLTGRSPRAM 172

BLAST of Lag0035263 vs. NCBI nr
Match: XP_030955724.1 (uncharacterized protein LOC115977839 [Quercus lobata])

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-20
Identity = 68/188 (36.17%), Postives = 95/188 (50.53%), Query Frame = 0

Query: 12  KAHESSPLKTAPDERLLNSISKSSPWPKAEADQRPRSHRAVRNQE---------ARFDRY 71
           K +E  P   A  +R      ++ P   +E   RP+  R    +E          R   Y
Sbjct: 180 KLYEKEPQTMAELKRKRAERMEAHPVRHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQNY 239

Query: 72  TPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKNKYCMFHGDHGHATRECIQLRDEIE 131
           TPL A   QVL  I+D   LK PEK++ DP+++NKNKYC FH DHGH T EC  L+ +IE
Sbjct: 240 TPLNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIE 299

Query: 132 ALIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSREC 191
            LIR+G  K FVG D++   L     +     L EI+ I+GG+        G+   S++ 
Sbjct: 300 NLIRQGKLKHFVGRDRTDEKLKGKMEESSRPPLGEIRIIVGGN------PMGQSSKSKKT 359

BLAST of Lag0035263 vs. NCBI nr
Match: XP_030970463.1 (uncharacterized protein LOC115990823 [Quercus lobata])

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-19
Identity = 59/162 (36.42%), Postives = 82/162 (50.62%), Query Frame = 0

Query: 39  KAEADQRPRSHRAVRNQEARFDRYTPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKN 98
           K   D+R            R  +YTPL A   QVL  I+D   LK PEKL+ DP+++N+N
Sbjct: 149 KGRTDERRDRESKKPGLPVRNQQYTPLNAPLEQVLMQIKDDPSLKWPEKLKGDPNKRNRN 208

Query: 99  KYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFEI 158
           KYC FH DHGH T EC  L+ +IE LIR+G  +GF+G D+                L EI
Sbjct: 209 KYCRFHRDHGHNTDECFDLKQQIENLIRQGKLRGFLGRDQRDEKQKGKMEDSSRPPLGEI 268

Query: 159 QTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSAL 201
           + I+GGS        G    S++ Y   + N+    ++  A+
Sbjct: 269 RVIIGGS------LTGRSSKSKKAYLKVVQNVQLTGRSPRAM 304

BLAST of Lag0035263 vs. NCBI nr
Match: XP_030970011.1 (uncharacterized protein LOC115990308 [Quercus lobata])

HSP 1 Score: 106.7 bits (265), Expect = 4.4e-19
Identity = 68/189 (35.98%), Postives = 97/189 (51.32%), Query Frame = 0

Query: 4   AEQKLNRKKAHESSPLKTAPDERLLNSISKSSPWPK--AEADQRPRSHRAVRNQEARFDR 63
           AE  +  KK+  +  ++  P        S+  P PK     D++ R +R       R   
Sbjct: 136 AEDAIIAKKSKRAERMEAHPARH-----SEQGPRPKKGRAEDKKERDNRKT-GPLGRSQN 195

Query: 64  YTPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKNKYCMFHGDHGHATRECIQLRDEI 123
           YTPL A   QVL  I+D   LK PEK++ DP+++NK+KYC FH DHGH T EC  L+ +I
Sbjct: 196 YTPLNAPLDQVLMQIKDDLSLKWPEKMKGDPNKRNKSKYCRFHRDHGHDTDECYDLKQQI 255

Query: 124 EALIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRE 183
           E LIR+G  + FVG D     L     +    LL EI+ I+GG+S       G+   S++
Sbjct: 256 ENLIRQGKLRHFVGRDHKDEKLKGKMEESSRPLLGEIRIIIGGNST------GQSSKSKK 312

Query: 184 CYFMALGNI 191
            Y   + N+
Sbjct: 316 MYLKVVQNV 312

BLAST of Lag0035263 vs. NCBI nr
Match: XP_030936440.1 (uncharacterized protein LOC115961637 [Quercus lobata])

HSP 1 Score: 106.3 bits (264), Expect = 5.7e-19
Identity = 65/197 (32.99%), Postives = 97/197 (49.24%), Query Frame = 0

Query: 4   AEQKLNRKKAHESSPLKTAPDERLLNSISKSSPWPKAEADQRPRS-HRAVRNQEARFDRY 63
           A+  +  KK   S  + T P             W +   D+  +    +VRNQ+     Y
Sbjct: 167 AKDAIIAKKRKRSERMDTNPSRHHEQGTRPKKGWTEEMRDRESKKLGPSVRNQQ-----Y 226

Query: 64  TPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKNKYCMFHGDHGHATRECIQLRDEIE 123
           TPL AS  QV   I+D   LK PEK++ DP+++N+NKYC FH DHGH T EC  L+ +IE
Sbjct: 227 TPLKASLEQVFMQIKDDPSLKWPEKMKGDPNKRNRNKYCRFHRDHGHDTDECFDLKQQIE 286

Query: 124 ALIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSREC 183
            LIR+G  +GF+G D+          +     L EI+ I+GGSS        +   S++ 
Sbjct: 287 NLIRQGKLRGFLGRDQRDEKQKGKMEESSRPSLGEIRVIIGGSST------SQSSKSKKA 346

Query: 184 YFMALGNIDRKAQATSA 200
           Y   + ++    ++  A
Sbjct: 347 YLKVVQSVQLSGRSPRA 352

BLAST of Lag0035263 vs. ExPASy TrEMBL
Match: A0A2N9H9Y5 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36824 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-19
Identity = 77/211 (36.49%), Postives = 111/211 (52.61%), Query Frame = 0

Query: 1   MAEAEQKLNRKKAHE------SSPLKTAPDERLLNSISKSS--PWPKAEADQRPRSHRAV 60
           M EA++ +N + A E      S   K   D RL +S +KSS   +PK E      S+R  
Sbjct: 317 MYEAQKFINAEDAFEARDEFLSRKRKEPEDRRLDSSRNKSSKQDYPKNERKNASSSNR-- 376

Query: 61  RNQEARFDRYTPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKNKYCMFHGDHGHATR 120
             +E R   +TPL  S  QVL  IQD   ++ P KLRSDP++++KN YC FH DHGH T 
Sbjct: 377 --REERPSSFTPLNMSIDQVLLQIQDNPDIRWPGKLRSDPEKRSKNLYCRFHRDHGHTTE 436

Query: 121 ECIQLRDEIEALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTIL 180
           +C  L+ +IEALIR+G    FV  DK       RP   D+ K        +++ EI+TI+
Sbjct: 437 DCFALKQQIEALIRQGKLGKFVRQDKPDVRPEPRPNRQDENKDRQEDRPRDIIGEIRTIV 496

Query: 181 GGSSEEGGAAHGEQKMSRECYFMALGNIDRK 194
           GG +  G +    +  +R+ + + +    RK
Sbjct: 497 GGLASGGASRSSRKAYARQAHNILVTQRSRK 523

BLAST of Lag0035263 vs. ExPASy TrEMBL
Match: A0A2N9I6U4 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48020 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-19
Identity = 82/224 (36.61%), Postives = 117/224 (52.23%), Query Frame = 0

Query: 1   MAEAEQKLNRKKAHE------SSPLKTAPDERLLNSISKSS--PWPKAEADQRPRSHRAV 60
           M EA++ +N + A +      S   K   D R  +S +KSS   +PKAE      S+R  
Sbjct: 284 MYEAQKFINAEDAFQARDEFLSRKRKEPEDRRFDSSRNKSSRQDYPKAERKNISSSNR-- 343

Query: 61  RNQEARFDRYTPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKNKYCMFHGDHGHATR 120
             +E R   +TPL  S  QVL  I+D   +K P KLRSDP +++K+ YC FH DHGH T 
Sbjct: 344 --REERPSSFTPLNMSIDQVLLQIEDNPDIKWPGKLRSDPTKRSKDLYCRFHRDHGHTTE 403

Query: 121 ECIQLRDEIEALIRKGYPKGFVGNDKSK-----RPLPADQGKG-----GANLLFEIQTIL 180
           +C  L+ +IEALIR+G    FV  DK++     RP   D+ K        +++ EI+TI+
Sbjct: 404 DCFALKQQIEALIRQGKLGKFVRQDKTEVRQEPRPPRQDENKDRQEDRPRDIIGEIRTIV 463

Query: 181 GGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSALGDGRGR 207
           GG      A+ G  + SR+ Y     NI    ++  +  DGR R
Sbjct: 464 GGL-----ASGGASRSSRKAYARQAHNILVTQRSRKSFEDGRPR 498

BLAST of Lag0035263 vs. ExPASy TrEMBL
Match: A0A2N9G875 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23615 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-19
Identity = 77/211 (36.49%), Postives = 111/211 (52.61%), Query Frame = 0

Query: 1   MAEAEQKLNRKKAHE------SSPLKTAPDERLLNSISKSS--PWPKAEADQRPRSHRAV 60
           M EA++ +N + A E      S   K   D RL +S +KSS   +PK E      S+R  
Sbjct: 481 MYEAQKFINAEDAFEARDEFLSRKRKEPEDRRLDSSRNKSSKQDYPKNERKNASSSNR-- 540

Query: 61  RNQEARFDRYTPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKNKYCMFHGDHGHATR 120
             +E R   +TPL  S  QVL  IQD   ++ P KLRSDP++++KN YC FH DHGH T 
Sbjct: 541 --REERPSSFTPLNMSIDQVLLQIQDNPDIRWPGKLRSDPEKRSKNLYCRFHRDHGHTTE 600

Query: 121 ECIQLRDEIEALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTIL 180
           +C  L+ +IEALIR+G    FV  DK       RP   D+ K        +++ EI+TI+
Sbjct: 601 DCFALKQQIEALIRQGKLGKFVRQDKPDVRPEPRPNRQDENKDRQEDRPRDIIGEIRTIV 660

Query: 181 GGSSEEGGAAHGEQKMSRECYFMALGNIDRK 194
           GG +  G +    +  +R+ + + +    RK
Sbjct: 661 GGLASGGASRSSRKAYARQAHNILVTQRSRK 687

BLAST of Lag0035263 vs. ExPASy TrEMBL
Match: A0A2N9HDB7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40219 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.6e-19
Identity = 76/211 (36.02%), Postives = 110/211 (52.13%), Query Frame = 0

Query: 1   MAEAEQKLNRKKAHE------SSPLKTAPDERLLNSISKSS--PWPKAEADQRPRSHRAV 60
           M EA++ +N + A E      S   K   D R  +S +KSS   +PK E      S+R  
Sbjct: 249 MYEAQKFINAEDAFEARDEFLSRKRKEPEDRRFDSSRNKSSKQDYPKTERKNTSSSNR-- 308

Query: 61  RNQEARFDRYTPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKNKYCMFHGDHGHATR 120
             +E R   +TPL  S  QVL  IQD   ++ P KLRSDP++++KN YC FH DHGH T 
Sbjct: 309 --REERPSSFTPLNMSIDQVLLQIQDNPDIRWPGKLRSDPEKRSKNLYCRFHRDHGHTTE 368

Query: 121 ECIQLRDEIEALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTIL 180
           +C  L+ +IEALIR+G    FV  DK       RP   D+ K        +++ EI+TI+
Sbjct: 369 DCFALKQQIEALIRQGKLGKFVRQDKPDIHPEPRPPRQDENKDRQEDRPRDIIGEIRTIV 428

Query: 181 GGSSEEGGAAHGEQKMSRECYFMALGNIDRK 194
           GG +  G +    +  +R+ + + +    RK
Sbjct: 429 GGLASGGASRSSRKAYARQAHNILVTQRSRK 455

BLAST of Lag0035263 vs. ExPASy TrEMBL
Match: A0A2N9HFP5 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38261 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.7e-19
Identity = 76/212 (35.85%), Postives = 113/212 (53.30%), Query Frame = 0

Query: 1   MAEAEQKLNRKKAHE------SSPLKTAPDERLLNSISKSS--PWPKAEADQRPRSHRAV 60
           M EA++ +N + A +      S   K   D R  +S +KSS   +PKAE      S+R  
Sbjct: 264 MYEAQKFINAEDAFQARDEFLSRKRKEPEDRRFDSSRNKSSRQDYPKAERKNTSSSNR-- 323

Query: 61  RNQEARFDRYTPLTASFAQVLAAIQDTNLLKRPEKLRSDPDRKNKNKYCMFHGDHGHATR 120
             +E R   +TPL  S  QVL  IQD+  +K P KLRSDP +++K+ YC FH DHGH T 
Sbjct: 324 --REERPSSFTPLNMSIDQVLLQIQDSPDIKWPGKLRSDPTKRSKDLYCRFHRDHGHTTE 383

Query: 121 ECIQLRDEIEALIRKGYPKGFVGNDKSK-----RPLPADQGKG-----GANLLFEIQTIL 180
           +C  L+ +IEALIR+G    FV  DK +     RP   D+ K        +++ EI+TI+
Sbjct: 384 DCFALKQQIEALIRQGKLGKFVRQDKPEVRHEPRPPRQDENKDRQEDRPRDIIGEIRTIV 443

Query: 181 GGSSEEGGAAHGEQKMSRECYFMALGNIDRKA 195
           GG +  G +    +  +R+ + + +    RK+
Sbjct: 444 GGLASGGASRSSRKAYARQAHNILVTQRSRKS 471

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030950020.15.2e-2037.04uncharacterized protein LOC115973918 [Quercus lobata][more]
XP_030955724.15.2e-2036.17uncharacterized protein LOC115977839 [Quercus lobata][more]
XP_030970463.12.6e-1936.42uncharacterized protein LOC115990823 [Quercus lobata][more]
XP_030970011.14.4e-1935.98uncharacterized protein LOC115990308 [Quercus lobata][more]
XP_030936440.15.7e-1932.99uncharacterized protein LOC115961637 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9H9Y52.1e-1936.49Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36824 PE=4 SV=1[more]
A0A2N9I6U42.1e-1936.61Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48020 PE=4 SV=1[more]
A0A2N9G8752.1e-1936.49Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23615 PE=4 SV=1[more]
A0A2N9HDB73.6e-1936.02Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40219 PE=4 SV=1[more]
A0A2N9HFP54.7e-1935.85Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38261 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035263.1Lag0035263.1mRNA