Lag0035256 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0035256
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Transposable element protein
Location	chr3: 17572335 .. 17574984 (-)
RNA-Seq Expression	Lag0035256
Synteny	Lag0035256

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCCCTATCGGTTGGTATACGGGAAAGCTTGTCATTTACCATTAGAGCTGGAACATAAAACGTTTTGGGCTTTGAAAAAGTTGAATTTTGATCTGAGTAGTGCAGGAGCAATGCGAATGCTGCAGCTCAGCGAATTGGAAGAATTTCGCCACTTTTCTTATGAGAATGCGAAAATTTATAAAGAAAAGATTAAGTTGTGGCATGACAAGAAAATTAGACCTAAAGAATTTGTCAAAGGTCAAAAAGTTTTGCTTTATAATTCTAGATTAAAATTGTTTCCTGGGAAACTAAAGTCCAAATGGTCAGGTCCGTTTGTTGTGATTGAGGTTTTCCCCCATGGAGCAGTTACTTTGCAAGATGAAAAAGATGGGAGAGTATTCAAGGTGAATGGTCAGCGTGTCAAGCATTATTGGGGAGAGGAGTTTCAGTCAAAATATCCTTCCCTAAGGTTGGTTGATGATTGAGAGAGCAGGATTTTTGCGGGAGCATTTCACAGAGCAAAATTTTGAGCTCCCAGGATTTGTATTGATTTTATTTTTCGTTGATTTGATTTTAATTGCGGTTAGGTTAGATTTGATTTTGCGAGATTTATTAGATTTTGTCTTTAAATATTTGATTAGATCTTATCTATTTTGTTTTGAATTTGATTTGATTTTCGGGTTATTTATTTAAATTATCTTTCAATTATCTTTTAATTAGTTAGATTTTATTAGATTTTATCTAGATTTTATTTTCAGTTATTTGAATTCTAGTTTTAATTAATTGAGATTTTCTCTAATTTATTCGGCTTCTTTTGAGAATAACAGATTAAGTTTGATTTGATCGGTTAAAGTTTAATTTGAATTTAAAAGATTTGATTTGCCTATTTTGAAATTTAAATTCCATATCTAAGATTCGCAGGTTCAGAAGATTGTTGCAGCAAAGATAATGTTGGAGCAAATTTCTCGTATGCATAGGAAGGATTTTAGTGTGAGTAATTATTTTTACCGTTGGGATTTTTGAATTTCTATGGGCAGGTGAATTGCAGGGATGTTGCCACATGTCGTGAAGGGCAATCCAACGGTTTAGCCGTTGACAGCATGCCGTTATTTCCCATAGATGATTGGAGTTCCACAATTTTACCGTTAGGGATTTGAATTGCAACTTAATTGTGAACGGTAAAACCATTTATTACGGAGCAAATCCTTTCGGTTAGGATTTCAAATTGCTGGAGCCTTATTTATTTGCAGACATTGGTAAGTCTTCGTTCTACTTCGTCTTCTTGATTCTATCTTGCCATCTACTTTCTTTCTTTCTCCTTTTCATCTTTGCAAAACCCTTTGAGTTATCCATGGCCAAAACAAGAGCGAGAAAGAAAGAGAGATGAGAGAGTAAGAGGAAATATTTATTATCCCCGAAGGTTCCGAAAGTGAAAACTAAGAAGAAAAGAACACGAGGAGAAAGAAGCTAAAAGAAGAAGGCGACAACAGAGGCGGAAGAACAGGAAAAAGTGACAGAGGATGAGGCTGCTGCAGTGGTTGAAGAAAACCTGGAAGAACTGCAAGAACAGACCCCAGGAGAGGCTGATCAGAGACTTGCGGATACAGATACGGCTCGAGAGGAAAATGTTGAGGAGAATCAAGAACAGCAGGCTGAGATGGTGAGAGACGAGCAGGTAGACGCAGTGTCTGAAAAAGGAAACAGCAGGTTCCATTTGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTTCTGAAAAGGGATTTCTTGTTCGAGCGTGGTTTCAGTGGTGATCTTCCACAGTTTCTGAGGACCGGTATTGCAGATCACGACTGGGAGCTGTTTTGTGCGAAGCCGGAATCTGTAAATGCACATGTGGTGCGTGAATTTTATGCTAACATTGTCAAGGAGGATGGTTTCCAGGTAATTGTCCGAGGAGTCGAGGTGGATTGGAGTCCAAGTGTTATCAATGCACTGTACAACGTTCAAAACTTCCCCATGCGGCATATAATGAGATGGCTGTGGCGCCATCTGATGAGCAACTAAGTGAGGTTGTAAGGGAGGTAGGAATTGAAGGGGCACAGTGGCAGTTATCCAAGACTCAGAAGAGGACATTCCAGTCGGCTTATTTGAAAAGGGAAGCAACACATGGATGGGATTTATTAGACAGAAGATGCTTCCAACAACACATGACTCGACAATCTCCAGGGAACGGGTTCTCCTAGCTTTTGCCATCTTACGGCCTCTCAGTATTAATGTAGGGAGGATCATTGCGAATGAGATTTTTGGATGTTGGAAAAAGAAGGTGGAGAAACTATTCTTTCCAAACACAATCACGATGTTGTGCAGAAGAGCAGGGGTTCCGGTGGATGAGGGAGATGTGATCCTGTTTGATAAGGGGATCATAGACACGCCCAATTTGGCACGGCTCCAGCGTGTGCAGGAGGTACGTCAAGGTGGGCTTATCCATGGCAGCAACTCGATTCTAGAACAACTGGCACTTTCAGCCATAGGCAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGAACTATGTTAAGAATCGGGATGCCAGCTTGAAGAAGGCGCTGCAAGAGAATTTTTCAAAACCTTATCCAGCCCTTCCAGCATTCCCTGACGATCTGTTGAACCCCTAG

mRNA sequence

ATGTCTCCCTATCGGTTGGTATACGGGAAAGCTTGTCATTTACCATTAGAGCTGGAACATAAAACGTTTTGGGCTTTGAAAAAGTTGAATTTTGATCTGAGTAGTGCAGGAGCAATGCGAATGCTGCAGCTCAGCGAATTGGAAGAATTTCGCCACTTTTCTTATGAGAATGCGAAAATTTATAAAGAAAAGATTAAGTTGTGGCATGACAAGAAAATTAGACCTAAAGAATTTGTCAAAGGTCAAAAAGTTTTGCTTTATAATTCTAGATTAAAATTGTTTCCTGGGAAACTAAAGTCCAAATGGTCAGGTCCGTTTGTTGTGATTGAGGTTTTCCCCCATGGAGCAGTTACTTTGCAAGATGAAAAAGATGGGAGAGTATTCAAGGTGAATGGTCAGCGTGTCAAGCATTATTGGGGAGAGGAGTTTCAGTCAAAATATCCTTCCCTAAGGGATGTTGCCACATGTCGTGAAGGGCAATCCAACGAGGCGGAAGAACAGGAAAAAGTGACAGAGGATGAGGCTGCTGCAGTGGTTGAAGAAAACCTGGAAGAACTGCAAGAACAGACCCCAGGAGAGGCTGATCAGAGACTTGCGGATACAGATACGGCTCGAGAGGAAAATGTTGAGGAGAATCAAGAACAGCAGGCTGAGATGGTGAGAGACGAGCAGGTAGACGCAGTGTCTGAAAAAGGAAACAGCAGTGGTGATCTTCCACAGTTTCTGAGGACCGGTATTGCAGATCACGACTGGGAGCTGTTTTGTGCGAAGCCGGAATCTGTAAATGCACATGTGGTGCGTGAATTTTATGCTAACATTGTCAAGGAGGATGGTTTCCAGATGGCTGTGGCGCCATCTGATGAGCAACTAAGTGAGGTTGTAAGGGAGGTAGGAATTGAAGGGGCACAGTGGCAGTTATCCAAGACTCAGAAGAGGACATTCCAGTCGGCTTATTTGAAAAGGGAAGCAACACATGGATGGGATTTATTAGACAGAAGATGCTTCCAACAACACATGACTCGACAATCTCCAGGGAACGGAAGAGCAGGGGTTCCGGTGGATGAGGGAGATGTGATCCTGTTTGATAAGGGGATCATAGACACGCCCAATTTGGCACGGCTCCAGCGTGTGCAGGAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGAACTATGTTAAGAATCGGGATGCCAGCTTGAAGAAGGCGCTGCAAGAGAATTTTTCAAAACCTTATCCAGCCCTTCCAGCATTCCCTGACGATCTGTTGAACCCCTAG

Coding sequence (CDS)

ATGTCTCCCTATCGGTTGGTATACGGGAAAGCTTGTCATTTACCATTAGAGCTGGAACATAAAACGTTTTGGGCTTTGAAAAAGTTGAATTTTGATCTGAGTAGTGCAGGAGCAATGCGAATGCTGCAGCTCAGCGAATTGGAAGAATTTCGCCACTTTTCTTATGAGAATGCGAAAATTTATAAAGAAAAGATTAAGTTGTGGCATGACAAGAAAATTAGACCTAAAGAATTTGTCAAAGGTCAAAAAGTTTTGCTTTATAATTCTAGATTAAAATTGTTTCCTGGGAAACTAAAGTCCAAATGGTCAGGTCCGTTTGTTGTGATTGAGGTTTTCCCCCATGGAGCAGTTACTTTGCAAGATGAAAAAGATGGGAGAGTATTCAAGGTGAATGGTCAGCGTGTCAAGCATTATTGGGGAGAGGAGTTTCAGTCAAAATATCCTTCCCTAAGGGATGTTGCCACATGTCGTGAAGGGCAATCCAACGAGGCGGAAGAACAGGAAAAAGTGACAGAGGATGAGGCTGCTGCAGTGGTTGAAGAAAACCTGGAAGAACTGCAAGAACAGACCCCAGGAGAGGCTGATCAGAGACTTGCGGATACAGATACGGCTCGAGAGGAAAATGTTGAGGAGAATCAAGAACAGCAGGCTGAGATGGTGAGAGACGAGCAGGTAGACGCAGTGTCTGAAAAAGGAAACAGCAGTGGTGATCTTCCACAGTTTCTGAGGACCGGTATTGCAGATCACGACTGGGAGCTGTTTTGTGCGAAGCCGGAATCTGTAAATGCACATGTGGTGCGTGAATTTTATGCTAACATTGTCAAGGAGGATGGTTTCCAGATGGCTGTGGCGCCATCTGATGAGCAACTAAGTGAGGTTGTAAGGGAGGTAGGAATTGAAGGGGCACAGTGGCAGTTATCCAAGACTCAGAAGAGGACATTCCAGTCGGCTTATTTGAAAAGGGAAGCAACACATGGATGGGATTTATTAGACAGAAGATGCTTCCAACAACACATGACTCGACAATCTCCAGGGAACGGAAGAGCAGGGGTTCCGGTGGATGAGGGAGATGTGATCCTGTTTGATAAGGGGATCATAGACACGCCCAATTTGGCACGGCTCCAGCGTGTGCAGGAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGAACTATGTTAAGAATCGGGATGCCAGCTTGAAGAAGGCGCTGCAAGAGAATTTTTCAAAACCTTATCCAGCCCTTCCAGCATTCCCTGACGATCTGTTGAACCCCTAG

Protein sequence

MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSLRDVATCREGQSNEAEEQEKVTEDEAAAVVEENLEELQEQTPGEADQRLADTDTAREENVEENQEQQAEMVRDEQVDAVSEKGNSSGDLPQFLRTGIADHDWELFCAKPESVNAHVVREFYANIVKEDGFQMAVAPSDEQLSEVVREVGIEGAQWQLSKTQKRTFQSAYLKREATHGWDLLDRRCFQQHMTRQSPGNGRAGVPVDEGDVILFDKGIIDTPNLARLQRVQEEFAERQTLTFWNYVKNRDASLKKALQENFSKPYPALPAFPDDLLNP

Homology

[Close]

BLAST of Lag0035256 vs. NCBI nr
Match: XP_030478524.1 (uncharacterized protein LOC115695608 [Cannabis sativa])

HSP 1 Score: 225.7 bits (574), Expect = 7.5e-55
Identity = 102/142 (71.83%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKI 60
           MSPYRLVYGKACHLP+ELEHK FWA+KKLNFDL +AG  R+LQL+ELEE R FSYENAK+
Sbjct: 1   MSPYRLVYGKACHLPVELEHKAFWAIKKLNFDLQAAGEARLLQLNELEEMRFFSYENAKL 60

Query: 61  YKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQ 120
           YKEK K WHDK+I+ + F +GQ+VLL+NSRLKLFPGKLKS+WSGPF +++V+P GAV ++
Sbjct: 61  YKEKTKRWHDKRIQHRVFEEGQQVLLFNSRLKLFPGKLKSRWSGPFTIVKVYPFGAVDIK 120

Query: 121 DEKDGRVFKVNGQRVKHYWGEE 143
           +E+ GRVF+VNGQR+KHY G E
Sbjct: 121 NEQSGRVFQVNGQRLKHYIGGE 142

[Close]

BLAST of Lag0035256 vs. NCBI nr
Match: XP_030498087.1 (uncharacterized protein LOC115713746 [Cannabis sativa])

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-54
Identity = 102/142 (71.83%), Postives = 124/142 (87.32%), Query Frame = 0


Query: 1   MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKI 60
           MSPYRLVYGKACHLP+ELEHK FWA+KKLNFDL +AG  R+LQL+ELEE R FSYENAK+
Sbjct: 105 MSPYRLVYGKACHLPVELEHKAFWAIKKLNFDLQAAGEARLLQLNELEEMRFFSYENAKL 164

Query: 61  YKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQ 120
           YKEK K WHDK+I+ + F +GQ+VLL+NSRLKLFPGKLKS WSGPF +++V+P GAV ++
Sbjct: 165 YKEKTKRWHDKRIQHRVFEEGQQVLLFNSRLKLFPGKLKSSWSGPFTIVKVYPFGAVDIK 224

Query: 121 DEKDGRVFKVNGQRVKHYWGEE 143
           +E+ GRVF+VNGQR+KHY G E
Sbjct: 225 NEQSGRVFQVNGQRLKHYIGGE 246

[Close]

BLAST of Lag0035256 vs. NCBI nr
Match: XP_030505229.1 (uncharacterized protein LOC115720213 [Cannabis sativa])

HSP 1 Score: 223.8 bits (569), Expect = 2.8e-54
Identity = 105/155 (67.74%), Postives = 128/155 (82.58%), Query Frame = 0


Query: 1   MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKI 60
           MSPYRLVYGKACHLP+ELEH+ FWALK LNFDLS+ G  + LQL+EL+E R F+YENAK+
Sbjct: 1   MSPYRLVYGKACHLPVELEHEAFWALKNLNFDLSAGGKAQKLQLNELDELRLFAYENAKL 60

Query: 61  YKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQ 120
           YKEK+K WHD +I+ + FVK Q+VLL+NSRLKLFPGKLKS+WSGPF V+EV+P  AV ++
Sbjct: 61  YKEKMKKWHDSRIKERVFVKNQQVLLFNSRLKLFPGKLKSRWSGPFTVMEVYPFAAVVVK 120

Query: 121 DEKDGRVFKVNGQRVKHYWGEEF--QSKYPSLRDV 154
           DEK  R FKVNGQR+K+YWGEE   +    SL+DV
Sbjct: 121 DEKSRREFKVNGQRLKNYWGEEVNREKNSISLKDV 155

[Close]

BLAST of Lag0035256 vs. NCBI nr
Match: XP_023522102.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-53
Identity = 103/150 (68.67%), Postives = 125/150 (83.33%), Query Frame = 0


Query: 1    MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKI 60
            MSPY+LV+GKACHLPLELEHK FWALKKLNFD ++ G +R +QL+ELEEFR+ +YENAK+
Sbjct: 1190 MSPYKLVFGKACHLPLELEHKAFWALKKLNFDYTTDGDLRRMQLNELEEFRYLAYENAKM 1249

Query: 61   YKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQ 120
            YKEK K+WHD KIRPKEF KGQ+VLL+NSRLKLFPGKLKS+WSGPF+V EV P+GA+T++
Sbjct: 1250 YKEKTKMWHDNKIRPKEFYKGQRVLLFNSRLKLFPGKLKSRWSGPFIVEEVTPYGAITIK 1309

Query: 121  DEKDGRVFKVNGQRVKHYWGEEFQSKYPSL 151
               + R F VNGQR+K Y G E +    SL
Sbjct: 1310 HGDERRPFTVNGQRLKPYLGGEVKRGIASL 1339

[Close]

BLAST of Lag0035256 vs. NCBI nr
Match: XP_023521407.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.1 bits (562), Expect = 1.8e-53
Identity = 102/150 (68.00%), Postives = 125/150 (83.33%), Query Frame = 0


Query: 1    MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKI 60
            MSPY+LV+GKACHLPLELEHK FWALKKLNFD ++ G +R +QL+EL+EFR+ +YENAK+
Sbjct: 1566 MSPYKLVFGKACHLPLELEHKAFWALKKLNFDYTTDGDLRRMQLNELDEFRYLAYENAKM 1625

Query: 61   YKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQ 120
            YKEK K+WHD KIRPKEF KGQ+VLL+NSRLKLFPGKLKS+WSGPF+V EV P+GA+T++
Sbjct: 1626 YKEKTKMWHDNKIRPKEFYKGQRVLLFNSRLKLFPGKLKSRWSGPFIVEEVTPYGAITIK 1685

Query: 121  DEKDGRVFKVNGQRVKHYWGEEFQSKYPSL 151
               + R F VNGQR+K Y G E +    SL
Sbjct: 1686 HGDERRPFTVNGQRLKPYLGGELKRGIASL 1715

[Close]

BLAST of Lag0035256 vs. ExPASy TrEMBL
Match: A0A3Q7XQS1 (LOW QUALITY PROTEIN: uncharacterized protein LOC113784129 OS=Cicer arietinum OX=3827 GN=LOC113784129 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.5e-53
Identity = 105/142 (73.94%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKI 60
           MSPY++VYGKACHLPLELEH+ FWA K LNFDL  AG  R+LQL+ELEEFR+F+YENAKI
Sbjct: 766 MSPYQIVYGKACHLPLELEHRAFWATKYLNFDLGKAGEARILQLNELEEFRNFAYENAKI 825

Query: 61  YKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQ 120
           YKEK K WHDKKI+ KEF +G+ VLL+NSRLKLFPGKLKSKWSGPF V +VFPHGAV L+
Sbjct: 826 YKEKTKKWHDKKIKFKEFQEGELVLLFNSRLKLFPGKLKSKWSGPFKVTKVFPHGAVELK 885

Query: 121 DEKDGRVFKVNGQRVKHYWGEE 143
           D      FKVNGQR+K Y+GEE
Sbjct: 886 DIHSDWNFKVNGQRLKSYFGEE 907

[Close]

BLAST of Lag0035256 vs. ExPASy TrEMBL
Match: A0A2G9FWY3 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29952 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.7e-52
Identity = 98/150 (65.33%), Postives = 121/150 (80.67%), Query Frame = 0


Query: 1    MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKI 60
            MSPYRLV+GKACHLP+ELEH  +WA++KLNFD+ +AG  R+LQL+EL+EFR  +YENAKI
Sbjct: 1422 MSPYRLVFGKACHLPVELEHNAYWAIRKLNFDMQAAGEKRLLQLNELDEFRLHAYENAKI 1481

Query: 61   YKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQ 120
            YKEK K WH+KKI  + F  GQ VLL+NSRLKLFPGKLKS+WSGPF + EVFPHGAV L+
Sbjct: 1482 YKEKKKRWHEKKIVERHFEPGQYVLLFNSRLKLFPGKLKSRWSGPFRITEVFPHGAVELE 1541

Query: 121  DEKDGRVFKVNGQRVKHYWGEEFQSKYPSL 151
            ++     FKVN QR+KHYWGE    ++ S+
Sbjct: 1542 NKNSRNRFKVNAQRIKHYWGEIVDRQHASI 1571

[Close]

BLAST of Lag0035256 vs. ExPASy TrEMBL
Match: A0A2K3NJZ5 (Integrase catalytic domain-containing protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g026684 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-51
Identity = 99/142 (69.72%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKI 60
           MSP+++VYGK+CHLPLELEHK  WA K LNFDLS AG  R+LQL EL+EFR+F+YENAKI
Sbjct: 344 MSPFQIVYGKSCHLPLELEHKALWATKFLNFDLSKAGESRILQLHELDEFRNFAYENAKI 403

Query: 61  YKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQ 120
           +KEK K WHDKKI+ +EF +GQ VLL+NSRLKLFPGKLKS+WSGPF + +VFPHGAV L+
Sbjct: 404 FKEKTKKWHDKKIQNREFREGQLVLLFNSRLKLFPGKLKSRWSGPFKIKKVFPHGAVELE 463

Query: 121 DEKDGRVFKVNGQRVKHYWGEE 143
           D    + FKVNGQR+K Y+G+E
Sbjct: 464 DRDTDQTFKVNGQRLKPYFGKE 485

[Close]

BLAST of Lag0035256 vs. ExPASy TrEMBL
Match: A0A1B5Z879 (Reverse transcriptase (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_417510 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-51
Identity = 99/150 (66.00%), Postives = 122/150 (81.33%), Query Frame = 0


Query: 1    MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKI 60
            MSP+++VYGKACHLPLELEHK  WA K LNFDL  AG  R+LQL EL+EFR+++YENAKI
Sbjct: 1466 MSPFQIVYGKACHLPLELEHKALWATKFLNFDLYKAGESRILQLHELDEFRNYAYENAKI 1525

Query: 61   YKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQ 120
            +KEK K WHDKKI+ +EF +GQ VLL+NSRLKLFPGKLKS+WSGPF V +VFP+GA+ ++
Sbjct: 1526 FKEKTKKWHDKKIQNREFQEGQLVLLFNSRLKLFPGKLKSRWSGPFKVTKVFPYGAIEVK 1585

Query: 121  DEKDGRVFKVNGQRVKHYWGEEFQSKYPSL 151
            D    R FKVNGQR+K Y+G EF+    S+
Sbjct: 1586 DPDSERTFKVNGQRLKPYYGGEFKRPTESI 1615

[Close]

BLAST of Lag0035256 vs. ExPASy TrEMBL
Match: A0A2G9HBV9 (DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12579 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.1e-51
Identity = 98/150 (65.33%), Postives = 118/150 (78.67%), Query Frame = 0


Query: 1    MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKI 60
            MSPY+LV+GKACHLP+ELEH  +WA++KLNFD+ +AG  R+LQL+EL+EFR  +YENAKI
Sbjct: 1121 MSPYKLVFGKACHLPVELEHNAYWAIRKLNFDMQAAGEKRLLQLNELDEFRLQAYENAKI 1180

Query: 61   YKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIEVFPHGAVTLQ 120
            YKEK K WHDKKI  + F  GQ VLL+NSRLKLFPGKLKS+WSGPF V EVF HGAV L+
Sbjct: 1181 YKEKTKRWHDKKIVERRFEPGQYVLLFNSRLKLFPGKLKSRWSGPFRVTEVFSHGAVELE 1240

Query: 121  DEKDGRVFKVNGQRVKHYWGEEFQSKYPSL 151
            +E     FKVN QR+KHYWG      + S+
Sbjct: 1241 NENSKNRFKVNAQRIKHYWGGVIDRHHTSI 1270

The following BLAST results are available for this feature:

BLAST of Lag0035256 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030478524.1	7.5e-55	71.83	uncharacterized protein LOC115695608 [Cannabis sativa]	[more]
XP_030498087.1	1.3e-54	71.83	uncharacterized protein LOC115713746 [Cannabis sativa]	[more]
XP_030505229.1	2.8e-54	67.74	uncharacterized protein LOC115720213 [Cannabis sativa]	[more]
XP_023522102.1	1.1e-53	68.67	LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp....	[more]
XP_023521407.1	1.8e-53	68.00	LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp....	[more]

BLAST of Lag0035256 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0035256 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A3Q7XQS1	1.5e-53	73.94	LOW QUALITY PROTEIN: uncharacterized protein LOC113784129 OS=Cicer arietinum OX=...	[more]
A0A2G9FWY3	3.7e-52	65.33	Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29952 PE=...	[more]
A0A2K3NJZ5	1.4e-51	69.72	Integrase catalytic domain-containing protein (Fragment) OS=Trifolium pratense O...	[more]
A0A1B5Z879	3.2e-51	66.00	Reverse transcriptase (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_41751...	[more]
A0A2G9HBV9	4.1e-51	65.33	DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_125...	[more]

BLAST of Lag0035256 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 169..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..228
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 31..124
None	No IPR available	PANTHER	PTHR24559:SF334	SUBFAMILY NOT NAMED	coord: 31..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0035256.1	Lag0035256.1	mRNA