Lag0035221 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGATTGGTTCTTCTTCCTTTCTCTGTGGGATGCATCTCTGAATCAAGTGTTGCTGTGGGAATTCAACATAATTCAAGATCCAAACCACCTCAGCCAATCTCTTCTCCTAGATCAAGTCTTTTCTCTTTCCTCTCTCTCTCTTTTTTTTTTTTGATCTTACGGGCACGGGCGGAGTCAGGAATTTTCTTAGAGAGTGATAAAGTTTTGGAGTCGGTTTCGTATCTTATCCAGATTCAATTTCCCATATGGATTTATTGGGGTTTTTTTTTTTTTGTTGGGTAGGATTAGTTTTTGTGAAATGGTAATTAGATTGTGTTTGGATCGTGTGACGACCCATCAAGTGGAAATTTTGAAATCATTGTTGGTCTGTTTTTAGTAAGTTTAGGTTCTAAATTTTCTACCAAACAAATATAATAATAGAGCATGAAATACAACTCTTTGTTTCATTGTCTTATAATTTTATTCTTAAAATCTTATGTTTTTTTGTTTGTTTGTTAAGAAGGTGAGAAAGATGAAGATGGGGAAGAAGTTGCTGATGAAACACTATTAGAAGAGAGCTTGAAGAACTCACAGAGGTTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACTTCTCTCAATTATTTGGTGAGTTGTGTTTTTCCTTTTTCCTTATTTTATTATTATTTTTTAAAAAATAATGATTTTTTTCTAATATATTGGAATACTTTTTCCTAACTTGGTTTAGTTCTAAAAAATTTCAAATGAAAAAAAAAAAAATTGTTTGAGACTTAAACTTCTTTAAATAAAATATTCAAAATTTTCATGTCATTTTCAAATTTTACTCTCAAAATCTTTCTTCATATCCTAATCTAATTTAATTTCAAAACCGATGGTGAAATCCTAATTAAAATTTAAATATTTTGGGGAAAAAGGGGGGGGGGGGTGATTTTCAAAATTTTTTTATTTTTTATTTAAAATTATTTGGACTAAATTTTAAAAGTGTTTTTAAAGTATTGTAAACCAAAATAAAGGAAACATTGAGGGAAAAAATTACTGTTTTCAAAATTGGACTACAATTTTTTAATGTAAAAAAAAAAAAAACAAACAAAAACTAAACAAAAAGGTTGCTAATTAGTAAACCAGCCATATTTTTCTTTTTAAAAAACATTACCAAATTACACCTTAATCTTTAAAATTTGGCTAAAATTTTAGAAAACAAAGAAATATACTAAAATAACATATCAAATCATTTCCACCCTAATAAAGAAAAACTTGATATATATTAAATCAAAACCCTAATCATTTTTTTTTCCTTTTGGGTAATATGATATTATTTTGAAAAAGTGTACAAAGAGGAGATGGAAGAAATGGAAATGGAAATGGAAATAGGATCTCCCAAAGATGTGAAGCATGTGACACACATTGGCTGTGATGCCACCACAAGATCAGATGATAATAATGCCAATCCTTTCATTGATTGGGAAACTCTTCTTGCTTCTGACCTTCTCTCTGTTCCCTCCTCCACTTCTTGGAGCCAATTTGAACATCAACTTTCAAACCCCACACATCATTTACCTAATATTGTACATCATTCCATTTGA ATGGAGAGATTGGTTCTTCTTCCTTTCTCTGTGGGATGCATCTCTGAATCAAGTGTTGCTGTGGGAATTCAACATAATTCAAGATCCAAACCACCTCAGCCAATCTCTTCTCCTAGATCAAAAGGTGAGAAAGATGAAGATGGGGAAGAAGTTGCTGATGAAACACTATTAGAAGAGAGCTTGAAGAACTCACAGAGGTTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAATGGAAATGGAAATAGGATCTCCCAAAGATGTGAAGCATGTGACACACATTGGCTGTGATGCCACCACAAGATCAGATGATAATAATGCCAATCCTTTCATTGATTGGGAAACTCTTCTTGCTTCTGACCTTCTCTCTGTTCCCTCCTCCACTTCTTGGAGCCAATTTGAACATCAACTTTCAAACCCCACACATCATTTACCTAATATTGTACATCATTCCATTTGA ATGGAGAGATTGGTTCTTCTTCCTTTCTCTGTGGGATGCATCTCTGAATCAAGTGTTGCTGTGGGAATTCAACATAATTCAAGATCCAAACCACCTCAGCCAATCTCTTCTCCTAGATCAAAAGGTGAGAAAGATGAAGATGGGGAAGAAGTTGCTGATGAAACACTATTAGAAGAGAGCTTGAAGAACTCACAGAGGTTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAATGGAAATGGAAATAGGATCTCCCAAAGATGTGAAGCATGTGACACACATTGGCTGTGATGCCACCACAAGATCAGATGATAATAATGCCAATCCTTTCATTGATTGGGAAACTCTTCTTGCTTCTGACCTTCTCTCTGTTCCCTCCTCCACTTCTTGGAGCCAATTTGAACATCAACTTTCAAACCCCACACATCATTTACCTAATATTGTACATCATTCCATTTGA MERLVLLPFSVGCISESSVAVGIQHNSRSKPPQPISSPRSKGEKDEDGEEVADETLLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEMEMEIGSPKDVKHVTHIGCDATTRSDDNNANPFIDWETLLASDLLSVPSSTSWSQFEHQLSNPTHHLPNIVHHSI Homology
BLAST of Lag0035221 vs. NCBI nr
Match: XP_011660226.1 (CRIB domain-containing protein RIC4 isoform X3 [Cucumis sativus]) HSP 1 Score: 261.9 bits (668), Expect = 3.9e-66 Identity = 143/179 (79.89%), Postives = 150/179 (83.80%), Query Frame = 0
BLAST of Lag0035221 vs. NCBI nr
Match: XP_008443702.1 (PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008443703.1 PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008443705.1 PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008443706.1 PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008443707.1 PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008443708.1 PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo]) HSP 1 Score: 259.6 bits (662), Expect = 2.0e-65 Identity = 142/179 (79.33%), Postives = 149/179 (83.24%), Query Frame = 0
BLAST of Lag0035221 vs. NCBI nr
Match: XP_038880090.1 (CRIB domain-containing protein RIC4-like isoform X1 [Benincasa hispida]) HSP 1 Score: 259.2 bits (661), Expect = 2.6e-65 Identity = 144/180 (80.00%), Postives = 150/180 (83.33%), Query Frame = 0
BLAST of Lag0035221 vs. NCBI nr
Match: XP_004139106.1 (CRIB domain-containing protein RIC4 isoform X4 [Cucumis sativus]) HSP 1 Score: 253.4 bits (646), Expect = 1.4e-63 Identity = 141/179 (78.77%), Postives = 148/179 (82.68%), Query Frame = 0
BLAST of Lag0035221 vs. NCBI nr
Match: XP_038880092.1 (CRIB domain-containing protein RIC4-like isoform X2 [Benincasa hispida]) HSP 1 Score: 250.8 bits (639), Expect = 9.1e-63 Identity = 142/180 (78.89%), Postives = 148/180 (82.22%), Query Frame = 0
BLAST of Lag0035221 vs. ExPASy Swiss-Prot
Match: Q9FFD5 (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana OX=3702 GN=RIC4 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19 Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 0
BLAST of Lag0035221 vs. ExPASy Swiss-Prot
Match: Q8GYU0 (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana OX=3702 GN=RIC2 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09 Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = 0
BLAST of Lag0035221 vs. ExPASy Swiss-Prot
Match: Q9M0Y9 (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04 Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0
BLAST of Lag0035221 vs. ExPASy Swiss-Prot
Match: F4IVV0 (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 7.6e-04 Identity = 25/55 (45.45%), Postives = 31/55 (56.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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