Lag0035027 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035027
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Locationchr3: 13776099 .. 13781942 (-)
RNA-Seq ExpressionLag0035027
SyntenyLag0035027
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGATGAAGAAGGGGGAGAAACTTCATCTTCTCCAAGGAGTTGCAGGTGAGGCAAAATCCCAATCCGTTTGCACAGAGAAAGATGGAACATGGAAGACTACTCGAGCAATCCCCGAAAATCAGAAGTGAATAAATAAAGAGAAGAAGAAAATAAATTGAAGTGAAAGCAAAAAGATTCTCTCTCATTTACCCAGTGAGGAAGAGGGAACAAGAACAGGAAGAGGAACAGAAACGTACCCAAGTTCGGTGAGCTCGTCGTCGAGGGTTGCCGTCGGTGAGGGAGGAAGCGCCGTCGATGAGGGAGGAAATGTGCTGCGAGGGAGGAAGCGGCGCCGAGGGTTTGGGTTTGTTTTCGAAGAGAGAGGGAAAAACGAAGAGAGAAACACTTTACCTTTTTACTGTTTTTAAAATTAAAAAAAAAAATTAAAATATCTTTTAATGTCGGGCAATGCCCGACATTAAAGGCGTCTTTTGATGTCGGGCAATGCCCGACATTAAAAGTTCGAAAATTTTAAAAAACGCGCGTCCGACATTAAAAGGCCCGCGCATTTTTTTGTCCGACATTAAAGCCTCCGCGCCTATTTTTCTGTCCGACATTAAAACTATAATTTGTTGTAGTGAAAGTTAAATGGTAAAAAGAAAAAAAAAAAAGGACAATTGCAATGGTGAGCAATGATTTTTTTAGATTTGCTAATAAAACAAAATTTTACGATCAAAAGGTTAGAAGCTTGAATCTTTCACCATGCATATTGTCCAAAAAAAAAATTAATATATCTCTAATTCTTCATTAATGAAGTATATCAAATATATTTAAACTTACGAAACTTTATGTGTATACTTTATGAATAAAATATATTATATTCATAAAATATACATCTGACATATTTAATATATCAGTTAACTGATATATACCAAATTTAAAGTAGATTAGTTGACTGATATACCAAATATCGAATATATCAATCACATCAAACAAATGAATGATATATACTTAATATACAATATATATCAATAACACCATTGATATACTTCTTAAACTTCTCACTTCCATCATGTTTTTAGAGATTTTTTCAACTTTTCAACTTTAATGTTTGAGTTAGACCTTTTTGTTTTTTGTTTTTTTTTTTGCTACATTTACAACGTTAAAAAACTGATGACATGGTTGTCAATCTTCCCTGCCCCCGTCCCCGCCTCCCATTTCAATTCCCATCTCCGCGAAATTCCTTGTTAAATTTTGCGGGGAATGGGGCGGAGATTCCTCCTAGGGAATTTGCGGGGATCGGGTTCCCCACGAGGAATTATAACCCCATTTAATTTTTTTTTGTCTCTATCGAATCAAATAATTCTTTTGATAAATTTTCAAATAGTTAACTTTGCATGGAAAATATTTATTAATTATCAATTAGATAGTTAATTATTGGGAAAAATACACTTTTAGTCCCTGAGGTTTGGGTTAGGTTTCATTTTGGTCCCTCAATTTTCAAACTCGACATTTTAGCCCTTGAGGTTTGGATTTCGTTACATTTTTAGTCCCTCCGTCAAATTTTCCATTATCCTTAACAAATTGCCGATGTGGCATGAATTTTTTTTATAGAATCCTCACGGATATCACGGACTCGCTGATGGCGTAGCAAAGGACATCACTAGCGATTGAATATGGAAATTCAATCGCTCCAGCGTAGTTTTATAGAATCCTCACGACGGCGCAAACCCCCATAACGGTGCAATCGAACGAACGGTGGTGCGAATCTGGTGAAGTAGAACCCTCCTGAACTGGAAAAAACAACCCATCACTTCTTTCTCTGTCTCTCTTTCACGTACTGATCGCCCCTGGTGAAATCTCCTCCGATGGCGAGACTCACAGCTACATTTTCAGCATCCATTCGAATGTCAAGGAACAGACGGGGCCAACACAGCATCCATTCGGAGCAAGAGTCGGGTCATCAGGAAGTAGGGAACCGAGGAGCCCAATCCCCAGCCTCGACCCTAGGCTAAGGCTAACCTCGGGCTTATGCTCAGGGTTCACCTAGGGCTTCTGGTTCTAGCCTCTGAGGTCGCAAAAGAGTTTAGTTGGATCGAATTGGATTCCAAATCATCCTAGAACGGAGGAAAAACCCTACTAAGCCGACTTAGGTATAAATACCATTCTTCACGTTTGGAGAAGGATTCGATACTTTGATTATTGACACTTTTTACTTCCTATTTGCTGACTTAAGCATCAGAGTGGGTGTGGCAAGCACCAGACGATGTGCAATTTCTACTGGTTTTGCAAATCACGTCTTCCCAGTCTCTATAAATTCACCGTTGGTGTCATGTGAAGATCAAGTGAGTCTTTTGTCCGGATTTTGATCACATTTCCCTCACCCACACAAATCTAGAAAAATTTCTAGATTTAAAGATTTCCAAATTTGAAGAGAGAATGGAGAGGGTGCATCTAATAGTTTTTTTTTTTTTTTTTTTTGAAAATAAACATAACTTCATTTGATTAAGAAGGCTTCTAGCCTATAACATAATAACAAATGGAATTAACCAGAGATTGAATCCAAATAGGAAAAGGATAAACCCATAGCATAGCTTCTTGTTGTTAACCCCTATTTGCCAAATTATCTGCTAATTTGTTTGCTTCTCTAGGGTATGAGCAAATTGAGCCATTTGATGATAGAATGTCATTTATCTTGTATTTTCTAGGTCTATTTTTATGTTTTCATCCTTTGCTTTTTTGTTGGTTTTGGCATGTGGTTGGCTTACACGTGTTCTGTGTAATGGTTATTTCTTTCGATGTTGTCGGGGTTTCTGTAATGAAAACATTCTCTCTGATTTTCTTCACTGAATAGATTTTCCATCTCTATCAAATCCTTGATGGTATCAGAGCTTTGAGAAATTTTAACGGCGTCCGAAGCTTCTTCTTCTTCCTCTTCATCTGGTTCTCTAACTCCAACCATTAACCCTTCCACACCTCTTAATACCCCTATTGTGACCCCTGTTGCTCAGCGTGATAAAAATCCTGCTCTATTAATCTCTTGCAAGCTCCACTGTGCCCAAATCTTCCGCAAGCACCCATTCAACCAAACTTTACCCAGCCTTAGTATCCTCCTCTAAATCCCTATCAACAACCATTTTATCCTTCCTCTCCGAGCGTTTCCTGCCATTTTATCCCTATCATCAGCCAAACTTTCCTCGTCCAAATCCTCAGCGATATTATCCTCCCCAATCTTTTCCAGCTCCCCCAACTGCGAATCCCAATCCCCTTCACCCCAATCCTTTTCCCACTTTACCCCAACCACTCTCTGTCAAGCTAAACGATACAAAATTTTTACTCTGGAAGAATCAGCTTCTCAACGCCATTCTTGCTAATGGTTTACACAGGTTCCTCGATGGTACCATTCCTCCCCCTCAGAAGTTCCTTGACGATCAACAATCACAACCGAATCCAGAGTTCCTCGTCTGGGAAAGATACAATAGGTTTATTATGTGTTGGATTTACTCCTCTCTGTCTGAAGAAAAAATGGGTGAAATCGTGAGTTTAGATACTACCTCTAAAATCTGGAATTCTTTAAAAAGAGCTTATGATTCTAAGACCACAGTTAGGATAATGGGCTTAAAACCCAACTTCAACGTATAAAGAAAGATGGTATTTTTGTCAGTCAATATCTCTCCCAAATTAAGGAAATAGCTGATAAATTTTCTACCATTGGAGAACCTATCTCATATAAGATCATTTGACTCATATATTGGATGGTCTTGGTAGTGAGTATAATGCATTTGTTACATCCATTTAAAACCGTGCTGATAGTCTTGCCCTTGAAGATGTTCGCAACATGTTGTTAGCTTTCGAGGCTAGGTTGGAAAAGCAAAATACAGTAGATCAACTAAGCTTAGCTCAAGCAAACCTCAGTAGCTTTCAATCTCACTTTAATGGCCGCCATTCCATGCCTCGTCCTTCCCTTAATACCACTGTTTTTTCAAGAACTCCCTTCAATCCATCTTCCCCTGTGTTGCCAAATACCTTATCTCCAAGCATTTTAGGTAAGCCTCAACCACAATCTTCTTTTTCTCCTTCTCAGAAATGGTCTTCTAGATCAAGTCCTAATCGTCCTCAATACCAAATATGTGGCAAATTTGGGCACACCGCTCTTATTTGTCGCCATCGCACAAACTTGGCCTACCAAACTCCATCACCTCAAGCAATGTTAACCATTGCTACTTCAAACCAGCCCCTAACCCAGCCTTTATCGGATTCTGCTTCTGTTTACTCTCATGATACATATCATCTCGATGAAAATTGGTTCCTCAACTCGGGTGCTACACACCATATGACTCATGATGTTGCCTCTTTGTCCAATCCCATGTCTTATCTTGGTGGTGAGCAAGTCACGGTCGGTGATGGTAAGCATATTACTATCTCTCATATTGGTTTCAAATTTGTTCCTTCCTTTTCTTCAAAACCTGTCTTTCTTGATTATGTTTTATACACGCCTGCTATTTCAAAAAAATTGATTAGTGTGGCTCGTTTGTGTAAAGATAATCAGGCCTATGTTGAATTTTACTCTACTTTTTTCTTGTCAAGGACCTTCAAACCAAGCAGGTACTCCTCAAGGGTACACTTGAAGATGGCCTTTATCGATTATCTACTGTTTCCTCATTGTCCACTATTTCTTCGGGTCTTCAGTCCAAGTCTCTGCTGCCGTTTTTCTGTCCTCAGTTACTTCACCCAATTGGCACCTTCGTTTGGGTCATCCAGCTGCCACAACTTTACATTCTGTTTTGTCTAAGCTCCATGTATCTTTGTTCTAGTGTTAACAAATTTTGTAACTCATGTCAAATGGCCAAAAGCCATCGTTTGCCTTTTTATTTAGTTGAGAACAAGTCTTGTAAGCCTTTTCAATTAGTTCACTCTGATGTATGGGAGCCTTCCCCAATACCGTCTATGAATGGATCTCGTTATTTCTTTTTTTTTTTATCGATGATTTTAGTCGTTACTCATGGCTTTATCTCCTCAAATCTAAAGATGAAACTCTTCCTTGCTTTCTTCACTTCAAGAAGTTTGTTGAAACACAATTCGAATTAAAAATCAAATGTTTATAAACTGATTGGGGTGGTGAATTTCGCACGGTTTCATCTTTTCTGTCTTCTCACAGCATTAATCATCGTGTTTCATGCCCCTACACTCCTCAACAAAATGGTCGTTGTTGAATGAGAAATTTCGGCCAATCACAAATTGCCACGTCATTAATTTAAATTAATGATAAAATAAATTTGGGATCAATTATAAATTTACACGTGTCCCTAAATTAAATTAATAGACATTAAAATTCGGCAAATCAAACTATGCCACTTGTCTATTATTGATCCATCGGATGACATAAGCCGAGTCCAATCAAATTATGCCACGTGGCAATTGGACCCAAGACTAATGTGACCCGAGATCATCAAAGAAATTGGGCTAAATTAAAATAATCCAATTTTATTAAAAATGAATTGGATTAAAGCCCAAAGGAGCCAAAGCCCAAAGGTTGGGCCCAGGCCCAAGCCCATATGAGGTCCACCAAACTCTATAAATAGAGGAGGCCACCATTCATTTTGGGGCATTCAGACAGAGTCAGAGAAGCCAGAGCCCAGAACATTCTCCCAAAGTCCAGAGCCTTCAGAAGTCAGAGAGTCCAGGGAATTCAGAAGATCCAAGATTCAGAATTCGGCCATCTCAAGACTCAGAAGATCCAACGCCTGGAAGACTCCAACGAATCAACCGTTTCTTCATCAAGATACAAGTTGAAGATTCAACCTTCCTCCGTCTGAGATCAAGCTCGCCAGCCCTCAGATCAGACTCTACATTTTGA

mRNA sequence

ATGGAGGAAGATGAAGAAGGGGGAGAAACTTCATCTTCTCCAAGGAGTTGCAGTGAGGAAGAGGGAACAAGAACAGGAAGAGGAACAGAAACGTACCCAAGTTCGGTGAGCTCGTCGTCGAGGGTTGCCGTCGGTGAGGGAGGAAGCGCCGTCGATGAGGGAGGAAATGTGCTGCGAGGGAGGAAGCGGCGCCGAGGGTTTGGCTACATTTTCAGCATCCATTCGAATGTCAAGGAACAGACGGGGCCAACACAGCATCCATTCGGAGCAAGAGTCGGGTCATCAGGAAGTAGGGAACCGAGGAGCCCAATCCCCAGCCTCGACCCTAGGCTAAGGCTAACCTCGGGCTTATGCTCAGGCATCAGAGTGGGTGTGGCAAGCACCAGACGATGTGCAATTTCTACTGGTTTTGCAAATCACGTCTTCCCAGTCTCTATAAATTCACCGTTGGTGTCATGTGAAGATCAACCAAACTTTCCTCGTCCAAATCCTCAGCGATATTATCCTCCCCAATCTTTTCCAGCTCCCCCAACTGCGAATCCCAATCCCCTTCACCCCAATCCTTTTCCCACTTTACCCCAACCACTCTCTGTCAAGCTAAACGATACAAAATTTTTACTCTGGAAGAATCAGCTTCTCAACGCCATTCTTGCTAATGGTTTACACAGGTTCCTCGATGGTACCATTCCTCCCCCTCAGAAGTTCCTTGACGATCAACAATCACAACCGAATCCAGAGTTCCTCGTCTGGGAAAGATACAATAGTCTTGCCCTTGAAGATGTTCGCAACATGTTGTTAGCTTTCGAGGCTAGGTTGGAAAAGCAAAATACAGTAGATCAACTAAGCTTAGCTCAAGCAAACCTCAGTAGCTTTCAATCTCACTTTAATGGCCGCCATTCCATGCCTCGTCCTTCCCTTAATACCACTGTTTTTTCAAGAACTCCCTTCAATCCATCTTCCCCTGTGTTGCCAAATACCTTATCTCCAAGCATTTTAGGTAAGCCTCAACCACAATCTTCTTTTTCTCCTTCTCAGAAATGGTCTTCTAGATCAAGTCCTAATCGTCCTCAATACCAAATATGTGGCAAATTTGGGCACACCGCTCTTATTTGTCGCCATCGCACAAACTTGGCCTACCAAACTCCATCACCTCAAGCAATGTTAACCATTGCTACTTCAAACCAGCCCCTAACCCAGCCTTTATCGGATTCTGCTTCTGTTTACTCTCATGATACATATCATCTCGATGAAAATTGGTTCCTCAACTCGGGTGCTACACACCATATGACTCATGATGTTGCCTCTTTGTCCAATCCCATGTCTTATCTTGGTGGTGAGCAAGTCACGGTCGGTGATGTCCAAGTCTCTGCTGCCGTTTTTCTGTCCTCAGTTACTTCACCCAATTGGCACCTTCGTTTGGGTCATCCAGCTGCCACAACTTTACATTCTGTTTTGTCTAAGCTCCATAGTCAGAGAAGCCAGAGCCCAGAACATTCTCCCAAAGTCCAGAGCCTTCAGAAGTCAGAGAGTCCAGGGAATTCAGAAGATCCAAGATTCAGAATTCGGCCATCTCAAGACTCAGAAGATCCAACGCCTGGAAGACTCCAACGAATCAACCGTTTCTTCATCAAGATACAAGTTGAAGATTCAACCTTCCTCCGTCTGAGATCAAGCTCGCCAGCCCTCAGATCAGACTCTACATTTTGA

Coding sequence (CDS)

ATGGAGGAAGATGAAGAAGGGGGAGAAACTTCATCTTCTCCAAGGAGTTGCAGTGAGGAAGAGGGAACAAGAACAGGAAGAGGAACAGAAACGTACCCAAGTTCGGTGAGCTCGTCGTCGAGGGTTGCCGTCGGTGAGGGAGGAAGCGCCGTCGATGAGGGAGGAAATGTGCTGCGAGGGAGGAAGCGGCGCCGAGGGTTTGGCTACATTTTCAGCATCCATTCGAATGTCAAGGAACAGACGGGGCCAACACAGCATCCATTCGGAGCAAGAGTCGGGTCATCAGGAAGTAGGGAACCGAGGAGCCCAATCCCCAGCCTCGACCCTAGGCTAAGGCTAACCTCGGGCTTATGCTCAGGCATCAGAGTGGGTGTGGCAAGCACCAGACGATGTGCAATTTCTACTGGTTTTGCAAATCACGTCTTCCCAGTCTCTATAAATTCACCGTTGGTGTCATGTGAAGATCAACCAAACTTTCCTCGTCCAAATCCTCAGCGATATTATCCTCCCCAATCTTTTCCAGCTCCCCCAACTGCGAATCCCAATCCCCTTCACCCCAATCCTTTTCCCACTTTACCCCAACCACTCTCTGTCAAGCTAAACGATACAAAATTTTTACTCTGGAAGAATCAGCTTCTCAACGCCATTCTTGCTAATGGTTTACACAGGTTCCTCGATGGTACCATTCCTCCCCCTCAGAAGTTCCTTGACGATCAACAATCACAACCGAATCCAGAGTTCCTCGTCTGGGAAAGATACAATAGTCTTGCCCTTGAAGATGTTCGCAACATGTTGTTAGCTTTCGAGGCTAGGTTGGAAAAGCAAAATACAGTAGATCAACTAAGCTTAGCTCAAGCAAACCTCAGTAGCTTTCAATCTCACTTTAATGGCCGCCATTCCATGCCTCGTCCTTCCCTTAATACCACTGTTTTTTCAAGAACTCCCTTCAATCCATCTTCCCCTGTGTTGCCAAATACCTTATCTCCAAGCATTTTAGGTAAGCCTCAACCACAATCTTCTTTTTCTCCTTCTCAGAAATGGTCTTCTAGATCAAGTCCTAATCGTCCTCAATACCAAATATGTGGCAAATTTGGGCACACCGCTCTTATTTGTCGCCATCGCACAAACTTGGCCTACCAAACTCCATCACCTCAAGCAATGTTAACCATTGCTACTTCAAACCAGCCCCTAACCCAGCCTTTATCGGATTCTGCTTCTGTTTACTCTCATGATACATATCATCTCGATGAAAATTGGTTCCTCAACTCGGGTGCTACACACCATATGACTCATGATGTTGCCTCTTTGTCCAATCCCATGTCTTATCTTGGTGGTGAGCAAGTCACGGTCGGTGATGTCCAAGTCTCTGCTGCCGTTTTTCTGTCCTCAGTTACTTCACCCAATTGGCACCTTCGTTTGGGTCATCCAGCTGCCACAACTTTACATTCTGTTTTGTCTAAGCTCCATAGTCAGAGAAGCCAGAGCCCAGAACATTCTCCCAAAGTCCAGAGCCTTCAGAAGTCAGAGAGTCCAGGGAATTCAGAAGATCCAAGATTCAGAATTCGGCCATCTCAAGACTCAGAAGATCCAACGCCTGGAAGACTCCAACGAATCAACCGTTTCTTCATCAAGATACAAGTTGAAGATTCAACCTTCCTCCGTCTGAGATCAAGCTCGCCAGCCCTCAGATCAGACTCTACATTTTGA

Protein sequence

MEEDEEGGETSSSPRSCSEEEGTRTGRGTETYPSSVSSSSRVAVGEGGSAVDEGGNVLRGRKRRRGFGYIFSIHSNVKEQTGPTQHPFGARVGSSGSREPRSPIPSLDPRLRLTSGLCSGIRVGVASTRRCAISTGFANHVFPVSINSPLVSCEDQPNFPRPNPQRYYPPQSFPAPPTANPNPLHPNPFPTLPQPLSVKLNDTKFLLWKNQLLNAILANGLHRFLDGTIPPPQKFLDDQQSQPNPEFLVWERYNSLALEDVRNMLLAFEARLEKQNTVDQLSLAQANLSSFQSHFNGRHSMPRPSLNTTVFSRTPFNPSSPVLPNTLSPSILGKPQPQSSFSPSQKWSSRSSPNRPQYQICGKFGHTALICRHRTNLAYQTPSPQAMLTIATSNQPLTQPLSDSASVYSHDTYHLDENWFLNSGATHHMTHDVASLSNPMSYLGGEQVTVGDVQVSAAVFLSSVTSPNWHLRLGHPAATTLHSVLSKLHSQRSQSPEHSPKVQSLQKSESPGNSEDPRFRIRPSQDSEDPTPGRLQRINRFFIKIQVEDSTFLRLRSSSPALRSDSTF
Homology
BLAST of Lag0035027 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-52
Identity = 152/396 (38.38%), Postives = 183/396 (46.21%), Query Frame = 0

Query: 173 FPAPPTAN-----PNPLHPNPFPTLPQPLSVKLNDTKFLLWKNQLLNAILANGLHRFLDG 232
           FP PPT N     PNP   NPFPTLPQPL+VKLND  FLLWKNQLLNA++ANGL  +LDG
Sbjct: 3   FP-PPTPNFLAQPPNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDG 62

Query: 233 TIPPPQKFLDDQQSQPNPEFLVWERYNSL------------------------------- 292
           TI PP +FLD  Q QPNP +  WERYN L                               
Sbjct: 63  TIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLT 122

Query: 293 ------------------------------------------------------------ 352
                                                                       
Sbjct: 123 RVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVLD 182

Query: 353 --------------------ALEDVRNMLLAFEARLEKQNTVDQLSLAQANLSSFQSHFN 412
                               +LEDVR++LLA+EARL+KQNTVDQL++AQANL +     N
Sbjct: 183 GLGSEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQANLVNLSLQHN 242

Query: 413 GRHSMPRPSLNTTVFSRTPFNPSSPVLPNTLSPSILGKPQPQSSFSPSQKWSSRSSPNRP 453
            +   P+ S         P +P S       S SILGKPQ         KW  + S ++ 
Sbjct: 243 SKRPPPKFSFPNHYKHSFPNSPISA----AQSQSILGKPQ------SVHKWPPKPSSSKI 302

BLAST of Lag0035027 vs. NCBI nr
Match: CAN73380.1 (hypothetical protein VITISV_032547 [Vitis vinifera])

HSP 1 Score: 140.2 bits (352), Expect = 5.5e-29
Identity = 98/271 (36.16%), Postives = 140/271 (51.66%), Query Frame = 0

Query: 195 PLSVKLNDTKFLLWKNQLLNAILANGLHRFLDGTIPPPQKFLDDQQSQPNPEFLVWERYN 254
           PL++KL+   +L+WKNQLLN ++ NGL   LD T   P KFLD QQ   NPE+ +W RYN
Sbjct: 211 PLTIKLDRDNYLIWKNQLLNVVIVNGLEGXLDNTRLYPPKFLDLQQLIINPEYSLWXRYN 270

Query: 255 SLAL--------EDVRNMLLAFEARLEKQNTVDQL--SLAQANLSSFQSHFNGRHSMPRP 314
            L +        E+V   ++ +    E    + Q+  S + A L    +           
Sbjct: 271 RLIMSWFYAFLFENVMTQIMGYNTASEIWLALGQIYASASMARLXKLCTQLQSLKKKKHF 330

Query: 315 SLNTTVFSRTPFNPSSPVL-PNTLSPSILGKPQ--PQSSFSPSQKWSSRSSPNRPQYQIC 374
              +  ++ TP     P L  N   PSILG+PQ  P     P +  +S +  ++P+ QIC
Sbjct: 331 KHPSHFYNSTPHFFIPPTLATNYFHPSILGQPQGNPLVRNWPFKPINSLNG-SKPKCQIC 390

Query: 375 GKFGHTALICRHRTNLAYQTPSPQAMLTIATSNQPLTQPLSDSASVYSHDTYHLDENWFL 434
           GKFGHTALIC HR NL YQ PS +   TI T+        S   S ++  +   D +WF+
Sbjct: 391 GKFGHTALICHHRANLHYQPPSLKNFNTIFTA-------FSLRPSSFATSSPIRDPSWFM 450

Query: 435 NSGATHHMTHDVASLSNPMSYLGGEQVTVGD 453
           +S  THH T D++ + N   ++G EQV VG+
Sbjct: 451 DSRVTHHXTPDISMIQNLAPFIGNEQVMVGN 473

BLAST of Lag0035027 vs. NCBI nr
Match: GFZ12741.1 (UBX domain-containing protein [Actinidia rufa])

HSP 1 Score: 127.9 bits (320), Expect = 2.8e-25
Identity = 127/416 (30.53%), Postives = 180/416 (43.27%), Query Frame = 0

Query: 174 PAPPTANPNPL----HPNP----------FPTLPQPLSVKLNDTKFLLWKNQLLNAILAN 233
           P PPT+NP P      PNP           P++ QPL+VKL+D  +++WK QLLN ++AN
Sbjct: 15  PPPPTSNPLPSSSIPKPNPQIINTSPLLNMPSINQPLAVKLDDHNYIIWKEQLLNIVIAN 74

Query: 234 GLHRFLDGTIPPPQKFLDDQQSQPNPEFLVWERYNSLAL--------EDVRNMLLAFEAR 293
           GL  FLDG+   P +FLD QQ Q NPEF  W+RYN L +        E +   ++ + + 
Sbjct: 75  GLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSA 134

Query: 294 LEKQNTVDQLSLAQ--ANLSSFQS------------------------------------ 353
            +    +++L  A   A+L+  ++                                    
Sbjct: 135 SQIWEALERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYT 194

Query: 354 ----HFNG------------------RHSMPRPSLNTTVFSRTPF-NPSSPVLPNTLSPS 413
               +F G                  R S+  P+  T++  +  F NPS+   PN+ S S
Sbjct: 195 DHLIYFLGGLGRDYNPFVTSIQSQAIRPSVEEPTSPTSLTRKPKFKNPSTNSFPNSNSYS 254

Query: 414 ILGKPQPQSSFSPSQKWSSRSSPN-RPQYQICGKFGHTALICRHRTNLAYQTPSP----- 473
                    S+SP+      SSP  RP+ QIC K GHTA  C H TNL YQ P P     
Sbjct: 255 HPRGQNRNPSYSPNP-----SSPKPRPRCQICLKPGHTANKCYHHTNLNYQPPPPPPRNF 314

Query: 474 QAMLT-----IATSNQPLTQPLSDSASVYSHDTYHLDENWFLNSGATHHMTHDVASLSNP 496
            A +T       +SNQP    LS             D +W+++SGA+HH T D+  L + 
Sbjct: 315 NAYITPNPSLSTSSNQPAMLLLSLP-----------DSSWYMDSGASHHFTPDLNMLDSA 374

BLAST of Lag0035027 vs. NCBI nr
Match: RVW77188.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 120.6 bits (301), Expect = 4.5e-23
Identity = 94/291 (32.30%), Postives = 142/291 (48.80%), Query Frame = 0

Query: 249 VWERYNSLALEDVRNMLLAFEARLEKQNTVD----QLSLAQANLSSFQS----HFNGRHS 308
           +  R +   +E + ++LL+++  LE+QN++     Q+ +A  N   ++S     FN  H 
Sbjct: 91  IQNRSDQPTIEQIHSLLLSYDFHLEQQNSISLHYAQVHMAYLNKKPYKSTPQPTFNHIHI 150

Query: 309 MPRPSLNTTVFSRTPFNPSSPVLPNTLSPSILGKPQPQSSFSPSQKWSSRSS--PNRPQY 368
            P+        S  PF P++    +    +ILGKPQPQ    P  +W    S    +PQ 
Sbjct: 151 QPK-------HSSPPFKPTT----SQYQLNILGKPQPQPR-QPQPQWKPHFSIQNQKPQC 210

Query: 369 QICGKFGHTALICRHRTNLAYQ-TPSPQAMLTIATSNQPLTQPLSDSASVYSH--DTYHL 428
           QICGKFGH ALIC H TNL Y   PSP+   T+ T+N  L+ P   S    +H   T++ 
Sbjct: 211 QICGKFGHIALICFHHTNLNYSPQPSPKYFNTVLTTNSQLSNPPEFSYPAMAHLAATHNT 270

Query: 429 --DENWFLNSGATHHMTHDVASLSNPMSYLGGEQVTVGD--------------------- 488
             D NW+++SGATHH T D+  L     + G +QVTV +                     
Sbjct: 271 VPDTNWYMDSGATHHFTLDINMLDIVTPFSGLDQVTVRNGKQLCISHLGTTKLPSSYSPL 330

Query: 489 --------VQVSAAVFLSSVTSPN-WHLRLGHPAATTLHSVLSKLHSQRSQ 495
                    +V   VF++++  PN WH RLGHPA + ++ +L   +  R+Q
Sbjct: 331 VLHQDQVSKRVILQVFIANIKDPNLWHKRLGHPALSVVNQILDSRNIARTQ 369

BLAST of Lag0035027 vs. NCBI nr
Match: CAN77126.1 (hypothetical protein VITISV_013628 [Vitis vinifera])

HSP 1 Score: 120.6 bits (301), Expect = 4.5e-23
Identity = 101/332 (30.42%), Postives = 141/332 (42.47%), Query Frame = 0

Query: 211 QLLNAILANGLHRFLDGTIPPPQKFLDDQQSQPNPEFLVWERYNSL-------------- 270
           Q +N    + L  F++G  P P KFLDD Q Q NP F+ WER N L              
Sbjct: 16  QNINPTPISSLEDFIEGETPIPAKFLDDAQLQINPLFIQWERMNRLVMSWIYSSLTLAMK 75

Query: 271 ------------------------------------------------------------ 330
                                                                       
Sbjct: 76  IKKEGITISEYLARIKEVFDKYSAMGEPLSYRDKLMYTLNGLTEEYDGFVTSIYNRSDKS 135

Query: 331 ALEDVRNMLLAFEARLEKQNTVDQLSLAQANLSSFQS----HFNGRHSMPR-PSLNTTVF 390
           +L++V ++L  +   LE++NT  QL  +Q NL+++      H N + + P+ P  + + F
Sbjct: 136 SLKEVHSLLYTYAYWLEQRNTAQQLQFSQVNLTAYSGQNKFHKNQQPNFPKYPQNSYSSF 195

Query: 391 SRTPFNPSSPVLPNTLSPSILGKP--QPQSSFSPSQKWSSRSSPNRPQYQICGKFGHTAL 450
              P N      PN+  PSILGKP  QPQSS    QK  + +   RPQ QICGKFGH AL
Sbjct: 196 PNKPINLYQSFRPNS-QPSILGKPQGQPQSSSKWFQKQGTGNFGPRPQCQICGKFGHMAL 255

Query: 451 ICRHRTNLAYQTPSPQAMLTIATSNQPLTQPLSDSASVYSHDT------YHLDENWFLNS 456
            C HR NL YQ   P        ++QP  QP +  A++ +  T       + D  W+++S
Sbjct: 256 NCYHRANLNYQPQFP--------NSQPKPQPPNPIAAMLTTSTSPTMPFNNCDTPWYMDS 315

BLAST of Lag0035027 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 7.5e-05
Identity = 44/123 (35.77%), Postives = 58/123 (47.15%), Query Frame = 0

Query: 334 KPQPQSS--FSPSQKWSSRSSPNRPQYQICGKFGHTALICRHRTNLAYQTPSPQAMLTIA 393
           KP  QSS  F P+   +++S P   + QICG  GH+A  C             Q  L+  
Sbjct: 256 KPWQQSSTNFHPN---NNQSKPYLGKCQICGVQGHSAKRCSQL----------QHFLSSV 315

Query: 394 TSNQPLT--QPLSDSASVYSHDTYHLDENWFLNSGATHHMTHDVASLSNPMSYLGGEQVT 453
            S QP +   P    A++     Y    NW L+SGATHH+T D  +LS    Y GG+ V 
Sbjct: 316 NSQQPPSPFTPWQPRANLALGSPYS-SNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVM 364

BLAST of Lag0035027 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-04
Identity = 42/132 (31.82%), Postives = 57/132 (43.18%), Query Frame = 0

Query: 336 QPQSSFSPSQKWSSRSSPNRPQYQICGKFGHTALICRHRTNLAYQTPSPQAMLTIATSNQ 395
           QP SS S S   + +  P   + QIC   GH+A  C         T   Q       S  
Sbjct: 238 QPSSSGSRSD--NRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQ-------STS 297

Query: 396 PLTQPLSDSASVYSHDTYHLDENWFLNSGATHHMTHDVASLSNPMSYLGGEQVTVGDVQV 455
           P T P    A++  +  Y+ + NW L+SGATHH+T D  +LS    Y GG+ V + D   
Sbjct: 298 PFT-PWQPRANLAVNSPYNAN-NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGST 357

Query: 456 SAAVFLSSVTSP 468
                  S + P
Sbjct: 358 IPITHTGSASLP 358

BLAST of Lag0035027 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.9e-53
Identity = 152/396 (38.38%), Postives = 183/396 (46.21%), Query Frame = 0

Query: 173 FPAPPTAN-----PNPLHPNPFPTLPQPLSVKLNDTKFLLWKNQLLNAILANGLHRFLDG 232
           FP PPT N     PNP   NPFPTLPQPL+VKLND  FLLWKNQLLNA++ANGL  +LDG
Sbjct: 3   FP-PPTPNFLAQPPNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDG 62

Query: 233 TIPPPQKFLDDQQSQPNPEFLVWERYNSL------------------------------- 292
           TI PP +FLD  Q QPNP +  WERYN L                               
Sbjct: 63  TIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLT 122

Query: 293 ------------------------------------------------------------ 352
                                                                       
Sbjct: 123 RVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVLD 182

Query: 353 --------------------ALEDVRNMLLAFEARLEKQNTVDQLSLAQANLSSFQSHFN 412
                               +LEDVR++LLA+EARL+KQNTVDQL++AQANL +     N
Sbjct: 183 GLGSEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQANLVNLSLQHN 242

Query: 413 GRHSMPRPSLNTTVFSRTPFNPSSPVLPNTLSPSILGKPQPQSSFSPSQKWSSRSSPNRP 453
            +   P+ S         P +P S       S SILGKPQ         KW  + S ++ 
Sbjct: 243 SKRPPPKFSFPNHYKHSFPNSPISA----AQSQSILGKPQ------SVHKWPPKPSSSKI 302

BLAST of Lag0035027 vs. ExPASy TrEMBL
Match: A5AG90 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032547 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.7e-29
Identity = 98/271 (36.16%), Postives = 140/271 (51.66%), Query Frame = 0

Query: 195 PLSVKLNDTKFLLWKNQLLNAILANGLHRFLDGTIPPPQKFLDDQQSQPNPEFLVWERYN 254
           PL++KL+   +L+WKNQLLN ++ NGL   LD T   P KFLD QQ   NPE+ +W RYN
Sbjct: 211 PLTIKLDRDNYLIWKNQLLNVVIVNGLEGXLDNTRLYPPKFLDLQQLIINPEYSLWXRYN 270

Query: 255 SLAL--------EDVRNMLLAFEARLEKQNTVDQL--SLAQANLSSFQSHFNGRHSMPRP 314
            L +        E+V   ++ +    E    + Q+  S + A L    +           
Sbjct: 271 RLIMSWFYAFLFENVMTQIMGYNTASEIWLALGQIYASASMARLXKLCTQLQSLKKKKHF 330

Query: 315 SLNTTVFSRTPFNPSSPVL-PNTLSPSILGKPQ--PQSSFSPSQKWSSRSSPNRPQYQIC 374
              +  ++ TP     P L  N   PSILG+PQ  P     P +  +S +  ++P+ QIC
Sbjct: 331 KHPSHFYNSTPHFFIPPTLATNYFHPSILGQPQGNPLVRNWPFKPINSLNG-SKPKCQIC 390

Query: 375 GKFGHTALICRHRTNLAYQTPSPQAMLTIATSNQPLTQPLSDSASVYSHDTYHLDENWFL 434
           GKFGHTALIC HR NL YQ PS +   TI T+        S   S ++  +   D +WF+
Sbjct: 391 GKFGHTALICHHRANLHYQPPSLKNFNTIFTA-------FSLRPSSFATSSPIRDPSWFM 450

Query: 435 NSGATHHMTHDVASLSNPMSYLGGEQVTVGD 453
           +S  THH T D++ + N   ++G EQV VG+
Sbjct: 451 DSRVTHHXTPDISMIQNLAPFIGNEQVMVGN 473

BLAST of Lag0035027 vs. ExPASy TrEMBL
Match: A0A7J0GPN0 (UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-25
Identity = 127/416 (30.53%), Postives = 180/416 (43.27%), Query Frame = 0

Query: 174 PAPPTANPNPL----HPNP----------FPTLPQPLSVKLNDTKFLLWKNQLLNAILAN 233
           P PPT+NP P      PNP           P++ QPL+VKL+D  +++WK QLLN ++AN
Sbjct: 15  PPPPTSNPLPSSSIPKPNPQIINTSPLLNMPSINQPLAVKLDDHNYIIWKEQLLNIVIAN 74

Query: 234 GLHRFLDGTIPPPQKFLDDQQSQPNPEFLVWERYNSLAL--------EDVRNMLLAFEAR 293
           GL  FLDG+   P +FLD QQ Q NPEF  W+RYN L +        E +   ++ + + 
Sbjct: 75  GLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSA 134

Query: 294 LEKQNTVDQLSLAQ--ANLSSFQS------------------------------------ 353
            +    +++L  A   A+L+  ++                                    
Sbjct: 135 SQIWEALERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYT 194

Query: 354 ----HFNG------------------RHSMPRPSLNTTVFSRTPF-NPSSPVLPNTLSPS 413
               +F G                  R S+  P+  T++  +  F NPS+   PN+ S S
Sbjct: 195 DHLIYFLGGLGRDYNPFVTSIQSQAIRPSVEEPTSPTSLTRKPKFKNPSTNSFPNSNSYS 254

Query: 414 ILGKPQPQSSFSPSQKWSSRSSPN-RPQYQICGKFGHTALICRHRTNLAYQTPSP----- 473
                    S+SP+      SSP  RP+ QIC K GHTA  C H TNL YQ P P     
Sbjct: 255 HPRGQNRNPSYSPNP-----SSPKPRPRCQICLKPGHTANKCYHHTNLNYQPPPPPPRNF 314

Query: 474 QAMLT-----IATSNQPLTQPLSDSASVYSHDTYHLDENWFLNSGATHHMTHDVASLSNP 496
            A +T       +SNQP    LS             D +W+++SGA+HH T D+  L + 
Sbjct: 315 NAYITPNPSLSTSSNQPAMLLLSLP-----------DSSWYMDSGASHHFTPDLNMLDSA 374

BLAST of Lag0035027 vs. ExPASy TrEMBL
Match: A0A438GYC1 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3227 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-23
Identity = 94/291 (32.30%), Postives = 142/291 (48.80%), Query Frame = 0

Query: 249 VWERYNSLALEDVRNMLLAFEARLEKQNTVD----QLSLAQANLSSFQS----HFNGRHS 308
           +  R +   +E + ++LL+++  LE+QN++     Q+ +A  N   ++S     FN  H 
Sbjct: 91  IQNRSDQPTIEQIHSLLLSYDFHLEQQNSISLHYAQVHMAYLNKKPYKSTPQPTFNHIHI 150

Query: 309 MPRPSLNTTVFSRTPFNPSSPVLPNTLSPSILGKPQPQSSFSPSQKWSSRSS--PNRPQY 368
            P+        S  PF P++    +    +ILGKPQPQ    P  +W    S    +PQ 
Sbjct: 151 QPK-------HSSPPFKPTT----SQYQLNILGKPQPQPR-QPQPQWKPHFSIQNQKPQC 210

Query: 369 QICGKFGHTALICRHRTNLAYQ-TPSPQAMLTIATSNQPLTQPLSDSASVYSH--DTYHL 428
           QICGKFGH ALIC H TNL Y   PSP+   T+ T+N  L+ P   S    +H   T++ 
Sbjct: 211 QICGKFGHIALICFHHTNLNYSPQPSPKYFNTVLTTNSQLSNPPEFSYPAMAHLAATHNT 270

Query: 429 --DENWFLNSGATHHMTHDVASLSNPMSYLGGEQVTVGD--------------------- 488
             D NW+++SGATHH T D+  L     + G +QVTV +                     
Sbjct: 271 VPDTNWYMDSGATHHFTLDINMLDIVTPFSGLDQVTVRNGKQLCISHLGTTKLPSSYSPL 330

Query: 489 --------VQVSAAVFLSSVTSPN-WHLRLGHPAATTLHSVLSKLHSQRSQ 495
                    +V   VF++++  PN WH RLGHPA + ++ +L   +  R+Q
Sbjct: 331 VLHQDQVSKRVILQVFIANIKDPNLWHKRLGHPALSVVNQILDSRNIARTQ 369

BLAST of Lag0035027 vs. ExPASy TrEMBL
Match: A5BPS3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_013628 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-23
Identity = 101/332 (30.42%), Postives = 141/332 (42.47%), Query Frame = 0

Query: 211 QLLNAILANGLHRFLDGTIPPPQKFLDDQQSQPNPEFLVWERYNSL-------------- 270
           Q +N    + L  F++G  P P KFLDD Q Q NP F+ WER N L              
Sbjct: 16  QNINPTPISSLEDFIEGETPIPAKFLDDAQLQINPLFIQWERMNRLVMSWIYSSLTLAMK 75

Query: 271 ------------------------------------------------------------ 330
                                                                       
Sbjct: 76  IKKEGITISEYLARIKEVFDKYSAMGEPLSYRDKLMYTLNGLTEEYDGFVTSIYNRSDKS 135

Query: 331 ALEDVRNMLLAFEARLEKQNTVDQLSLAQANLSSFQS----HFNGRHSMPR-PSLNTTVF 390
           +L++V ++L  +   LE++NT  QL  +Q NL+++      H N + + P+ P  + + F
Sbjct: 136 SLKEVHSLLYTYAYWLEQRNTAQQLQFSQVNLTAYSGQNKFHKNQQPNFPKYPQNSYSSF 195

Query: 391 SRTPFNPSSPVLPNTLSPSILGKP--QPQSSFSPSQKWSSRSSPNRPQYQICGKFGHTAL 450
              P N      PN+  PSILGKP  QPQSS    QK  + +   RPQ QICGKFGH AL
Sbjct: 196 PNKPINLYQSFRPNS-QPSILGKPQGQPQSSSKWFQKQGTGNFGPRPQCQICGKFGHMAL 255

Query: 451 ICRHRTNLAYQTPSPQAMLTIATSNQPLTQPLSDSASVYSHDT------YHLDENWFLNS 456
            C HR NL YQ   P        ++QP  QP +  A++ +  T       + D  W+++S
Sbjct: 256 NCYHRANLNYQPQFP--------NSQPKPQPPNPIAAMLTTSTSPTMPFNNCDTPWYMDS 315

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155181.11.2e-5238.38uncharacterized protein LOC111022315 [Momordica charantia][more]
CAN73380.15.5e-2936.16hypothetical protein VITISV_032547 [Vitis vinifera][more]
GFZ12741.12.8e-2530.53UBX domain-containing protein [Actinidia rufa][more]
RVW77188.14.5e-2332.30Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera][more]
CAN77126.14.5e-2330.42hypothetical protein VITISV_013628 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Q94HW27.5e-0535.77Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.7e-0431.82Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A6J1DQX75.9e-5338.38uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A5AG902.7e-2936.16Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032547 PE=4 SV=1[more]
A0A7J0GPN01.4e-2530.53UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4... [more]
A0A438GYC12.2e-2332.30Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
A5BPS32.2e-2330.42Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_013628 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..512
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 203..256
NoneNo IPR availablePANTHERPTHR34222:SF48SUBFAMILY NOT NAMEDcoord: 203..256
coord: 254..461
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 254..461

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035027.1Lag0035027.1mRNA