Lag0035026 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0035026
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr3: 13774459 .. 13775457 (+)
RNA-Seq Expression	Lag0035026
Synteny	Lag0035026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTGGAACTTGTGTATACCTTCTAAGATTAAGTACTTTATTTGGAAATGCTTCCATGAAAACTTGCCTACCATGCTTGCTTTGCCTAGGAAACATATTGCAACCACAAATATGTGTAATCTTTGTTATAAAAAGATTGAAACGGTGGACCATGCCTTATTCCATTGTAAGAGAGCAAGAAATATTTGGAGGGGAATGAGTCATGAGTACTTCATTCTGACTAGGGATGACTTGCACATTCGAGAAAGATTGAGATCAATTATGAATTTGTTTCCAATAGATCATGTAGAAACTATATTTATTGGCGCTTGGACCATTTGGAATGACAGGAATAGTGGTGTTTCTAACAATCCAATTATGCACATTGATCTCAAATGTGAATGGATTTATGAGTATGTGCAACAATAATATAAGAGATTTAATGTCTGAAACCCAAGTACCCATTCAACAGGTATATTCGTTAACGATGATGCAGCTGCTGTTTCAAAGCGGGTTGGAGGAATTGTAGGTGCTACGAAACTTCCAATAGTCTGGTGTTGTGTGACGGCGAGGCAAGAATTTGCAAGCCAAACCATTTTTGTCGATGCGGCTGTGCAGGAAGGAGATGAAATTTTCGACTTTGGTGCAGCAGTGATGGATTTAAGGGGCGGGCTTCAAGCGGCTCTTCAAGGGTTTAAATCAGTGGCTTCTTCAGTTCTCATTGTCGAAGCCCAAGCAATCATAGAAGGTCTACGACTGGCCCAACGGTTGAATGTCCAACGGGTTATTATTAAATCAGATTCACTGTCATGTGTCCACATGATAAATGGGGATCATCCAATTGCCATTGAAGTCAAAACAATTATTCAGGATATTTTGGCGTTAAATGATACATTTCAAATCAAGGATTTGATAGAGAGGGAAAATCTATTTAGTGAAGAAAATCAGAGAGAATGTTCTCATTACAGAAACCATGACAACAGCGAAAGAAATAGACATTACACAGAACACGTGTAA

mRNA sequence

ATGATGTGGAACTTGTGTATACCTTCTAAGATTAAGTACTTTATTTGGAAATGCTTCCATGAAAACTTGCCTACCATGCTTGCTTTGCCTAGGAAACATATTGCAACCACAAATATGTGTAATCTTTGTTATAAAAAGATTGAAACGGTGGACCATGCCTTATTCCATTGTATATTCGTTAACGATGATGCAGCTGCTGTTTCAAAGCGGGTTGGAGGAATTGTAGGTGCTACGAAACTTCCAATAGTCTGGTGTTGTGTGACGGCGAGGCAAGAATTTGCAAGCCAAACCATTTTTGTCGATGCGGCTGTGCAGGAAGGAGATGAAATTTTCGACTTTGGTGCAGCAGTGATGGATTTAAGGGGCGGGCTTCAAGCGGCTCTTCAAGGGTTTAAATCAGTGGCTTCTTCAGTTCTCATTGTCGAAGCCCAAGCAATCATAGAAGGTCTACGACTGGCCCAACGGTTGAATGTCCAACGGGTTATTATTAAATCAGATTCACTGTCATGTGTCCACATGATAAATGGGGATCATCCAATTGCCATTGAAGTCAAAACAATTATTCAGGATATTTTGGCGTTAAATGATACATTTCAAATCAAGGATTTGATAGAGAGGGAAAATCTATTTAGTGAAGAAAATCAGAGAGAATGTTCTCATTACAGAAACCATGACAACAGCGAAAGAAATAGACATTACACAGAACACGTGTAA

Coding sequence (CDS)

ATGATGTGGAACTTGTGTATACCTTCTAAGATTAAGTACTTTATTTGGAAATGCTTCCATGAAAACTTGCCTACCATGCTTGCTTTGCCTAGGAAACATATTGCAACCACAAATATGTGTAATCTTTGTTATAAAAAGATTGAAACGGTGGACCATGCCTTATTCCATTGTATATTCGTTAACGATGATGCAGCTGCTGTTTCAAAGCGGGTTGGAGGAATTGTAGGTGCTACGAAACTTCCAATAGTCTGGTGTTGTGTGACGGCGAGGCAAGAATTTGCAAGCCAAACCATTTTTGTCGATGCGGCTGTGCAGGAAGGAGATGAAATTTTCGACTTTGGTGCAGCAGTGATGGATTTAAGGGGCGGGCTTCAAGCGGCTCTTCAAGGGTTTAAATCAGTGGCTTCTTCAGTTCTCATTGTCGAAGCCCAAGCAATCATAGAAGGTCTACGACTGGCCCAACGGTTGAATGTCCAACGGGTTATTATTAAATCAGATTCACTGTCATGTGTCCACATGATAAATGGGGATCATCCAATTGCCATTGAAGTCAAAACAATTATTCAGGATATTTTGGCGTTAAATGATACATTTCAAATCAAGGATTTGATAGAGAGGGAAAATCTATTTAGTGAAGAAAATCAGAGAGAATGTTCTCATTACAGAAACCATGACAACAGCGAAAGAAATAGACATTACACAGAACACGTGTAA

Protein sequence

MMWNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHCIFVNDDAAAVSKRVGGIVGATKLPIVWCCVTARQEFASQTIFVDAAVQEGDEIFDFGAAVMDLRGGLQAALQGFKSVASSVLIVEAQAIIEGLRLAQRLNVQRVIIKSDSLSCVHMINGDHPIAIEVKTIIQDILALNDTFQIKDLIERENLFSEENQRECSHYRNHDNSERNRHYTEHV

Homology

[Close]

BLAST of Lag0035026 vs. NCBI nr
Match: XP_042950031.1 (uncharacterized protein LOC122282138 [Carya illinoinensis])

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-13
Identity = 63/227 (27.75%), Postives = 102/227 (44.93%), Query Frame = 0


Query: 2   MWNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHCIFVN 61
           +W+L IP +IK F W+  HE LPT   L  KH+   ++C +C   +E   HALF+C  V 
Sbjct: 553 LWHLKIPKQIKIFAWRACHEKLPTFKNLKHKHVLENDICVICTSCVEDAAHALFYCSDVR 612

Query: 62  DDAAAVSKRVGGIVG--------------------ATKLPIVWCCVTARQEFASQ----- 121
                   ++G IV                     AT L + W     R +F  +     
Sbjct: 613 QVWLDYCPKLGEIVSDLSFWDLANLAHDRGSNDVLATFLVVAWGLWNRRNKFIYEDVSLH 672

Query: 122 -TIFVDAAVQ-EGDEIFDFGAAVM--DLRGGLQAALQGFKSVASSVLIVEAQAIIEGLRL 181
            T  +++A+  + DE F  G  V+  D  G +   +   +   SS   +E  A++ GL+L
Sbjct: 673 ITTAINSALSLQQDESFSAGVGVILRDHNGDVVVVVSKVEREVSSAEFIEVIALLRGLQL 732

Query: 182 AQRLNVQRVIIKSDSLSCVHMINGDHPIAIEVKTIIQDILALNDTFQ 200
             +  V ++I+KS+SL  V+ +N       +   I+QD   L + F+
Sbjct: 733 CAQWGVPKIILKSNSLILVNSLNESSKCLTDFDFILQDFRRLVNGFE 779

[Close]

BLAST of Lag0035026 vs. NCBI nr
Match: XP_030502854.1 (uncharacterized protein LOC115718027 [Cannabis sativa])

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-10
Identity = 62/228 (27.19%), Postives = 93/228 (40.79%), Query Frame = 0


Query: 2   MWNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHCIFVN 61
           +W LCIP K+K F+W+    NLPT + L  +H+    +C +C  + ET  HAL  C    
Sbjct: 541 LWGLCIPPKVKNFLWRAATNNLPTCVNLVFRHVEVPTVCPVCKAQPETTSHALIFC---- 600

Query: 62  DDAAAVSKRVG-------GIVGATKLPIVWCCVTARQ----------------------- 121
           + A A  ++VG       G    + L +++   TA Q                       
Sbjct: 601 NIALACWRKVGVTFVFDPGGQFRSWLELIFTSATAEQIATVAMKAQDKNSLSSLCLNNKV 660

Query: 122 ---------EFASQTIFVDAAVQEGDEIFDFGAAVMDLRGGLQAALQGFKSVASSVLIVE 181
                    E  +  + VDAA+ E +E + FG    D  G    A  G      SV ++E
Sbjct: 661 DGGERWIKPETNTIKLNVDAAIFEKEEQYGFGIVARDHFGNCLEARAGCFGGVYSVAVIE 720

Query: 182 AQAIIEGLRLAQRLNVQRVIIKSDSLSCVHMINGDHPIAIEVKTIIQD 191
           A  I E L   +  N   V++++DSL  V  I     +      +IQD
Sbjct: 721 ALGIKEALSWIKTKNWDHVVVETDSLVTVQAIRSSQIMGSTFGLVIQD 764

[Close]

BLAST of Lag0035026 vs. NCBI nr
Match: KAG6693248.1 (hypothetical protein I3842_10G159900, partial [Carya illinoinensis])

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-10
Identity = 65/265 (24.53%), Postives = 97/265 (36.60%), Query Frame = 0


Query: 2   MWNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHCIFVN 61
           +W+L +P KIK F W+  HE LPT   L  KH+   ++C  C   +E   HALF+C  V 
Sbjct: 428 LWHLKLPKKIKIFAWRACHEKLPTFQKLKLKHVLENDICAFCSSCVEDAAHALFYCNDVR 487

Query: 62  DDAAAVSKRVGGIVG--------------------ATKLPIVW----------------- 121
                    +G IV                      T L + W                 
Sbjct: 488 QVWMDYCPELGEIVSDLSFWDLANLARDRGSHDVLTTFLVVAWRLWNRRNKFIYEDVSLN 547

Query: 122 ------CCVTARQEFASQTIF------------------------VDAAVQEGDEIFDFG 181
                   +  +QE+    +F                        VD A          G
Sbjct: 548 INTAVNNALPLKQEYTKVQVFHGFDKRINHVVYWHPPPIGCLKLNVDGATFSDSFSAGVG 607

Query: 182 AAVMDLRGGLQAALQGFKSVASSVLIVEAQAIIEGLRLAQRLNVQRVIIKSDSLSCVHMI 200
             + D  G +  A    +   SS + +EA A++ GL+L  +  V ++I++SDSL  V+ +
Sbjct: 608 VILRDHNGDVVVAASKVEREVSSAVFIEAIALLRGLQLCVQWGVPKIILESDSLILVNCL 667

[Close]

BLAST of Lag0035026 vs. NCBI nr
Match: KAG6693249.1 (hypothetical protein I3842_10G159900 [Carya illinoinensis])

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-10
Identity = 65/265 (24.53%), Postives = 97/265 (36.60%), Query Frame = 0


Query: 2   MWNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHCIFVN 61
           +W+L +P KIK F W+  HE LPT   L  KH+   ++C  C   +E   HALF+C  V 
Sbjct: 424 LWHLKLPKKIKIFAWRACHEKLPTFQKLKLKHVLENDICAFCSSCVEDAAHALFYCNDVR 483

Query: 62  DDAAAVSKRVGGIVG--------------------ATKLPIVW----------------- 121
                    +G IV                      T L + W                 
Sbjct: 484 QVWMDYCPELGEIVSDLSFWDLANLARDRGSHDVLTTFLVVAWRLWNRRNKFIYEDVSLN 543

Query: 122 ------CCVTARQEFASQTIF------------------------VDAAVQEGDEIFDFG 181
                   +  +QE+    +F                        VD A          G
Sbjct: 544 INTAVNNALPLKQEYTKVQVFHGFDKRINHVVYWHPPPIGCLKLNVDGATFSDSFSAGVG 603

Query: 182 AAVMDLRGGLQAALQGFKSVASSVLIVEAQAIIEGLRLAQRLNVQRVIIKSDSLSCVHMI 200
             + D  G +  A    +   SS + +EA A++ GL+L  +  V ++I++SDSL  V+ +
Sbjct: 604 VILRDHNGDVVVAASKVEREVSSAVFIEAIALLRGLQLCVQWGVPKIILESDSLILVNCL 663

[Close]

BLAST of Lag0035026 vs. NCBI nr
Match: CAB4309574.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 72.8 bits (177), Expect = 4.5e-09
Identity = 59/216 (27.31%), Postives = 100/216 (46.30%), Query Frame = 0


Query: 2    MWNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHC---- 61
            +W L IP+KIK+F+W+C  + LP    L ++ I  T++C+ C++K+E+V HA++ C    
Sbjct: 1192 IWALKIPNKIKFFLWRCVWDLLPCGQTLFKRKITPTSICHSCHRKVESVLHAIWGCEVAK 1251

Query: 62   -IFVNDDAAAV------SKRVGGIVGATKLPIVWCCVTARQEFASQT----------IFV 121
             ++ N    AV      +K       A  LP +           SQ           I+V
Sbjct: 1252 EVWRNSVWGAVQLLHRMTKFAQEFSDANNLPHMSHGRQPSSRVLSQVWRPPVAGIYKIYV 1311

Query: 122  DAAVQEGDEIFDFGAAVMDLRGGLQAALQGFKSVASSVLIVEAQAIIEGLRLAQRLNVQR 181
            D A++ GD +   G  V + +G   AA   +   +      E  A IEGLR A  +    
Sbjct: 1312 DGAIKSGDYVRGVGVVVRNEKGEFMAACVRWLQASYGARQTELMAAIEGLRFAIDMGFID 1371

Query: 182  VIIKSDSLSCVHMI------NGDH-PIAIEVKTIIQ 190
             I++ D+   ++ I      NG + P+  EV ++++
Sbjct: 1372 AILEMDAQDYINSILSTEECNGIYAPLIEEVNSLLK 1407

[Close]

BLAST of Lag0035026 vs. ExPASy TrEMBL
Match: A0A2N9HY54 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45174 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.6e-10
Identity = 52/191 (27.23%), Postives = 86/191 (45.03%), Query Frame = 0


Query: 2    MWNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHCIFVN 61
            +W+L +P K+K F+W+  HE LP    L R+ I     C+ C    ET  HAL+ C F  
Sbjct: 1995 IWSLPVPLKVKNFMWRACHEALPVKTNLFRRQIPLDTTCDECLSHPETSFHALWTCPFAQ 2054

Query: 62   D--DAAAVSKRVGGIVGATKLPIVWCCVTARQEFASQTIFVDAAVQEGDEIFDFGAAVMD 121
            +   A      +     ++ + + W C      F +     D A+         G  + +
Sbjct: 2055 EVWSAEPHFLTLHTANASSFIDLSWWCPPLTGIFKAN---FDGAIFPDKATAGIGVVICN 2114

Query: 122  LRGGLQAALQGFKSVASSVLIVEAQAIIEGLRLAQRLNVQRVIIKSDSLSCVHMINGDHP 181
             +G   A +    ++ +SV +VEA+A  E ++LA  L ++RVI + DS   +H +    P
Sbjct: 2115 DQGVPIATISRKIALPASVEVVEARAANEAIQLAIHLGIERVIFEGDSSIIIHALQNQDP 2174

Query: 182  IAIEVKTIIQD 191
                  T I+D
Sbjct: 2175 CLAHFGTFIED 2182

[Close]

BLAST of Lag0035026 vs. ExPASy TrEMBL
Match: A0A6J5XES2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS30849 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-09
Identity = 59/216 (27.31%), Postives = 100/216 (46.30%), Query Frame = 0


Query: 2    MWNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHC---- 61
            +W L IP+KIK+F+W+C  + LP    L ++ I  T++C+ C++K+E+V HA++ C    
Sbjct: 1192 IWALKIPNKIKFFLWRCVWDLLPCGQTLFKRKITPTSICHSCHRKVESVLHAIWGCEVAK 1251

Query: 62   -IFVNDDAAAV------SKRVGGIVGATKLPIVWCCVTARQEFASQT----------IFV 121
             ++ N    AV      +K       A  LP +           SQ           I+V
Sbjct: 1252 EVWRNSVWGAVQLLHRMTKFAQEFSDANNLPHMSHGRQPSSRVLSQVWRPPVAGIYKIYV 1311

Query: 122  DAAVQEGDEIFDFGAAVMDLRGGLQAALQGFKSVASSVLIVEAQAIIEGLRLAQRLNVQR 181
            D A++ GD +   G  V + +G   AA   +   +      E  A IEGLR A  +    
Sbjct: 1312 DGAIKSGDYVRGVGVVVRNEKGEFMAACVRWLQASYGARQTELMAAIEGLRFAIDMGFID 1371

Query: 182  VIIKSDSLSCVHMI------NGDH-PIAIEVKTIIQ 190
             I++ D+   ++ I      NG + P+  EV ++++
Sbjct: 1372 AILEMDAQDYINSILSTEECNGIYAPLIEEVNSLLK 1407

[Close]

BLAST of Lag0035026 vs. ExPASy TrEMBL
Match: A0A803PAK3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.7e-09
Identity = 54/204 (26.47%), Postives = 90/204 (44.12%), Query Frame = 0


Query: 3    WNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHC----- 62
            W L +PSKI+ F+W+  H+ LP    L  +HIA ++ C LC +  ET+ HALF+C     
Sbjct: 1222 WGLKLPSKIRIFLWRAIHDCLPVADILHTRHIADSSQCTLCNRANETIFHALFYCKRPKK 1281

Query: 63   ---IFVNDDAAAVSKRVGGIVGATKLPIVWCCVTARQEFASQTIFVDAAVQEGDEIFDFG 122
               +     A + +   G     TK    W             +  DAA+   +    FG
Sbjct: 1282 YHDVHGRQPATSSAPAAGHNTAVTK-DSDW----LNPPSGCLKLNTDAAINTMENKSGFG 1341

Query: 123  AAVMDLRGGLQAALQGFKSVASSVLIVEAQAIIEGLRLAQRLNVQRVIIKSDSLSCVHMI 182
            A + D  G + AA+        +  I EA A++  L+  + L +    I+++SLS V  +
Sbjct: 1342 AVLRDCSGQIIAAMSTPFCGCFTPKITEALALMHALQWIKDLQLPLHYIETNSLSVVKGL 1401

Query: 183  NGDHPIAIEVKTIIQDILALNDTF 199
            +    +  +   ++ +I  L   F
Sbjct: 1402 HPSRELVSDFHCLLHNISILVSNF 1420

[Close]

BLAST of Lag0035026 vs. ExPASy TrEMBL
Match: A0A2H5Q8Y3 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_207130 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.9e-09
Identity = 61/235 (25.96%), Postives = 102/235 (43.40%), Query Frame = 0


Query: 1   MMWNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHC--- 60
           ++W+L +P KI+ F+W+     LP+   L ++ I     C LC   IE V HAL  C   
Sbjct: 161 IIWSLALPKKIRIFVWRAAKNLLPSDENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAA 220

Query: 61  -------IFVNDDAAAVSKRVGGIVGATK-----------LPIVWCCVTARQEFA----- 120
                  +F ND  AA  + +  ++   K             ++W    AR ++      
Sbjct: 221 KKVWRLSLFDNDIQAAPGQDILSLLHGVKRMRSNADVDLFAAMLWAKWNARNQWLFKGKR 280

Query: 121 --SQTIFVDA-AVQE--------GDEIFDFGAAVMDLRGGLQAALQGFKSVASSVLIVEA 180
              Q++   A AV E         D +   GA + D  G + A          SV   EA
Sbjct: 281 ENPQSVVAKAEAVMEAYKRVQPSADNLAGLGAVIRDENGQVTATAIKVSKFHGSVAYAEA 340

Query: 181 QAIIEGLRLAQRLNVQRVIIKSDSLSCVHMINGDHPIAIEVKTIIQDILALNDTF 199
           +A+  GL++A+  +V+ VI++SDS   V ++N       E+  ++ +I  L ++F
Sbjct: 341 EAMEWGLQVAKDAHVKDVIMESDSQEVVSLVNNRQGSRSEIYWVVLEIQKLKESF 395

[Close]

BLAST of Lag0035026 vs. ExPASy TrEMBL
Match: A0A2N9FSI8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17763 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.4e-09
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 3   WNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHCIFVND 62
           W L IP KIK+FIW+ FHE+LPT   L R+ I  T  C +C +++ET  HAL+ C    +
Sbjct: 768 WKLSIPGKIKHFIWRAFHESLPTSHNLFRRKIIPTPFCKVCDQEVETTSHALWTCPMARN 827

Query: 63  DAAAVSKRVGGIVG 77
             A V  R  G +G
Sbjct: 828 TWALVPGRSSGRLG 841

[Close]

BLAST of Lag0035026 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-05
Identity = 20/58 (34.48%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 2   MWNLCIPSKIKYFIWKCFHENLPTMLALPRKHIATTNMCNLCYKKIETVDHALFHCIF 60
           +WNL I  K+K+F+W+   + L T   L  + +     C  C+++ E+++HALF C F
Sbjct: 162 IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPF 219

The following BLAST results are available for this feature:

BLAST of Lag0035026 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_042950031.1	1.4e-13	27.75	uncharacterized protein LOC122282138 [Carya illinoinensis]	[more]
XP_030502854.1	2.4e-10	27.19	uncharacterized protein LOC115718027 [Cannabis sativa]	[more]
KAG6693248.1	2.4e-10	24.53	hypothetical protein I3842_10G159900, partial [Carya illinoinensis]	[more]
KAG6693249.1	2.4e-10	24.53	hypothetical protein I3842_10G159900 [Carya illinoinensis]	[more]
CAB4309574.1	4.5e-09	27.31	unnamed protein product [Prunus armeniaca]	[more]

BLAST of Lag0035026 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0035026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9HY54	2.6e-10	27.23	Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45174 PE=4 SV=1	[more]
A0A6J5XES2	2.2e-09	27.31	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS30849 PE=...	[more]
A0A803PAK3	3.7e-09	26.47	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A2H5Q8Y3	4.9e-09	25.96	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_207130 PE=4 SV=1	[more]
A0A2N9FSI8	6.4e-09	44.59	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]

BLAST of Lag0035026 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09510.1	1.4e-05	34.48	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 1..60 e-value: 6.5E-13 score: 49.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 95..233 e-value: 1.4E-8 score: 36.8
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 100..199 e-value: 2.4E-13 score: 50.0
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 98..198 e-value: 3.2776E-12 score: 59.6352
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 97..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0035026.1	Lag0035026.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity