Lag0034924 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0034924
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNA-binding protein Y14-like
Locationchr3: 12436919 .. 12447663 (-)
RNA-Seq ExpressionLag0034924
SyntenyLag0034924
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGCGCCGATGTTGAGGCTGTCGACTTCGAGCCCGAGGAAGACGACCTCATGGACGAGGATGGAGCTGCCGAAGCCGATGCCTCCCCGCGAGCTCCTTTTCCTAAGCTCAAATCTGCCATTACCGGCGGCGCATCTTCCTCGCCGGCCGGTGGTCCGAAGAAGACCAAGGGTCGTGGTTTCCGAGAAGAATCTGATCGCAACACCCGCCTTGCTGGGTCGGACTTCGATTCCCTCAAGTCTGCTGACGGCCCTGGCCCCCAACGATGTTAGTTTTGCCCCTTTCTCTTTCTTCATCTATTCCCTTTCTTCTTCTTAATTACCTAGTTCGACAGGTTGAGTTTTGCCATTTTTTCTCTATGCTGGTTTCTTTTTTCCATTTGTTATAGCTAGGGTTATGAAATTTTGGATGCTTATTTACTTGGTAGGTGGCGGATTTAGATGTATTGGCCTGTGCGTTCTACCGAAGGTTGTTTTTCTTGAATTTTCGGGATTAATGAGTTGAGAGTAAGCAAATCTTTTTCTTGAGCTTGAAGGGATTTTGCTTACTGTTAATGTCGGCTGGTTTTGCCGTCTTGTTTCAACAATGTAACAGATCTTTGCTGAAATTTGATGTGGGAAATAGTCATAGAGAAAAAGGTTTAATGTCTTGATGTGGAAAATTATCATGGAGCATCGACTTTCAAGAGAGTTAAAAGAATGAGCCTTTCGTTGCCTTATCCTCAAAAACGGTGCACTCTTTGCTAAGCGGCTGTCGAGTCTTAAGATCATTTTTTCATCCATTTGCCACCTCCCTTCTCCTGGTGTAATTTCCTCTTTTCTTCTTACGGGTGTATCAACCATTAGCACACGGACATGAAGTAAACTCTTCACTCTATCATGACTTTTTTGGGACCAGAAATGGAACTTTTCATTGATAAATGAAAGGAGACTATGGCTCAAGGATAGAAACTCCACAAGGGAGGGAAACCAAGAACCTAATGGATGGATACACAAGGAACAATAAAGCAACTAAAAAAAAAAAAAAAACCAAAAGGAAACTACCACAAGATGAAACTAAAGACCAAGCGAATGTAAAGGAAATAACCCAAGGAAAAACTTGCAACAGACGAGTCTTAGAAGCCAAAAATAACTCAGAAGGCTGCCTCCAAACTCACAAGGGAGCATAAATGAGGACAAAAAGTAGAATCTGAACCATCGAAACCTGCATCTCTTATACCACCATGCAGAGCAAACCAAAACCAACCAGAGAACAAGCTTTATTGGAGCCCATCTTAGTTCAGCTTGATTAGAAGTTGGTTTGATGACTAAAATAAAGCCATTTCTTCATTCTCTTATGACTAACTATTCCTTGGAGGGATCATTCAACATCAGCCCTTTATAACCAAGGATGGGCTTGTGCCGAATGGTCTCAGTTGGTTTACTTGCTCTCCCTCCTTCCTTTTGTCTAAATCCCATTGGTTCCATGCCAATAAATGTTGACCTTCAGTATACCAATTCTCCTATTTTAAGTTGGAAAAGGGGAAACATTACTGGATCGGTTGGGTGTTTTAGACCCCTACTCACTCCTAGCTTGTATCATATATGATCTCTCAAATATTGCATCTTGTTCAGTTATAGATGTTTGGAGTTTTCAATTTGTGAGCTTGAACATTGTAACTAGGGACTTTCTTCATGAGGTTGAAACTCACATGGATGAAAGGAACTTTACCCTCATAATTAGAATTTGCCTCCTAATCAGAAAGAAGATTCTAAAATGTGGACACTGCATAGTTTGGGGTTTTATCGTGCAAATCTCTTCTCTCGAAGCTTTCGTGTCTATTTATTGTATTCTAAAAGGTTGGTCCTCTGAGATCTGGCATGCTAGAGTTCCTAATAGGATTCAAGTTTTTCCTGTGGTCCCTTGTCATCAACTATCAATATTAATGATAGGATTCAATGGAGGAATCCTCGAATCTTCCCCTATCCTCAACAGTGTATTACCATTAGGAATGGTGCAGAGGATAAGCCATCTCTTTTCTTTCACCTTTTGCCTATGATTGTTGGATGTTGTCTTCCTGGAAATGTTGCTTACATGGGTGTCTGCACATGTCTTTTGTGGTCTTCCTCTTGGAAGTCTACAATGATCTGCTTTTTGGTGATGAAATGGTAGTTCTTTGGTGAATGCTTGTATTGCTCTTGTTTGGCAGTTATGCTTGAAAAGATGTGATAGATTTTTTTAATGATACTCTAAAACTTGGGAAATTTTTTTGTTTTGGTTCATTTTGTAGCTTTCCTCTGGAGCTCTTTCAATCGAACATTTTAACTATTCTCATTGCTCTCTCTCTTAAAGATTTGAACCGGGAAGCTCTTTGTAATTCCTTGATTTGGGCTTGGGGGATATCTATACCCTCCCCTTTTGTGCACTTTCCCTGGTTATTTAGATAAAGTTTTTGTCACCGAACAGAAAAAAAGGTGGCTCAGGTCAGGGACTTCAGTCATTTCAAGAAAAAAAATTATAAACATTTTATCCTCTTGGATTTATGAGTAAACAAATGATTCGATGTGTCCAAATTTCCATATTGTGCCAAACAAAAGCCAAGTTTGTCAATTTTTTGCATATAATGTTATGAGTCATGAGCTTAAAACTATCATTCATTTCTTACAGAACAAGAGATCAAGACTATCCTAACACTGATTTAATAGCTGCAGTACATGGTAGTTGCATAATTTATGCATTTGCTTCTGCGGGAAGGTGGAGGAACAGTGACTTCTTACTTTTGCAATTTAATCTTTTCTTTAAAAAACCCTTTCAACTTTACACTCCATCAGTAGACTGATTGGGAAAATCTAGTACGACTTATCCTGGATCAAAGCCTGCAAAATTTTACCTGCTATGCAGTATTGCAGGTTTTAAGGCTCTTTCAGATGGACAGGTACACCCTGATTGATGGTGCCTGTCCCACATTGCTCGGCTTTCTGAGCATGTCCTTGGTACTCTGTTGTCAGTGAGAAATGTTTAATTATATGATATAAATAGTTATAGAAATAGTTCATGTGGAGAGCAATAGATCCTTTAGCTATTACACCTTGAAATCAATTTCTAATTCTAGCTACTGTGTATAGCTATTGAAGGATGGATCATTCTGGTAACTGGTGTACATGAAGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTCGACCGTCGTACTGGGTTTGTCAAGGTACATTTGCTTACTATTTTATTTTTTTTCCTATAGTAACTGTAATTTATATATTTTATCTCTTTTCTATTAAAGAGAAGTAGAAATATGCATATATGGCGTTTGGTTGTTCTATACTTAAAAACATCTAATAACTAGGTAATTTTGAAAGGAATAGAAATAGAAAACTTAAATTTTGCTAATGATCGTATGGTTTGTAAGAAGAATGTAGTAGTGTAGATTCTATTTTTATATTTGATGTTTTTAAAATCTGCATATTCTCCCTTTTCTCTGCACCCGTCTTGAAAGTACAATAAATTGTTTTAATGTTAAATAAGGTTTGCCAAATAGTTCATCACCCTATCTGGCGTACCTTTCTTTTGTAATAATTGTTTTTTTAAGTCTATCAATTGGGGCAATTGTTTTCAAGCTCCATTTGAGTTTATATCATCTATCTTGATAGAATTAAAGGGGTTAATTAAAGGAGGAGCCCAAAATGCCAAGTTGAACATAACTCAAGTGGTTAAGTATTTGTACTCGTCTATTATGGTGCATAAGTTCGAACCACCCCCACCCTATTCTTTGCAATGTAATATTAAAAAATTAAAGAGTACAAAAGGTTGGAGGTTAAAGTGACGTCCTCTAAATAAGATTTTGTACAACAGTAAACCAGCTTCAATGCAGTAAATACATTATACTGGGGGTACCAAAAGCTTGGAAAATAAAATGTCCACCAAAGATTTTACTGGACAGTAAACCAGCTACATTTTTTTTGGGATAAAAACCGAGCTTTCAATGAGAAAAAATTGAAAGAATACAAGGAGATCCAAAAAACCAAGTTCCAAAGAATACAAGGAGATCCAAAAAACCAAGTTCCAAAGAACATGGTTGCCAGAAAACCAGTAGAAAAGGAACAGAGTTGTCCAAGGTTTTGTTCGTTAGCAAAAAAGAGGGGAAAAGGAACAAAAAGATGGGAAAGCGGATGAAAAATACCAGAATGAAGAAGGTTAGGTTACGAGGAGATCCACTTGTAATTTGTTGGAATCAGAATTTGAAGATTGTGTGCAAGTGGGTTTGAAAGATACTCGACTCGATGAAGGTTGGATTTTTGGGGAGAGATCTCGACCATTGATGATTTTGTGGCAAGAGGTGAAGTTGTGGAGGGGGTGACGCTTCAACCGTTGCAAAGATTAGGAGAAGGCGAATAGTTGTGACAAAAATTGAGAAAAAAAGATATGAAAGATTGAACCCTGGCCGACAACAAAAGCATGTATGGCCAGAGATGAAAATTTAGTAAAAGCGCCAATGTCGTTTTGATGAAGAGATGATGGTGAGGTGGGTTAGTCACGTGAAAGGTCGGGAAGGAAAAAAAAATTGGAAGTAAATGGGACCATGGGCTCAAATATAACTCTTTTTGAGTGGGCTGTGTTTAAATAAATGGCATGAGGGCCCATTTACTTTCCAAGTTTGGAAAGGAGGTAGATGGATTTTGGGCTAGATTGTCTTTATTTTAAATCCCAATAATTGACCTATTTTGGCAAGATCCTATCCACGCGAAGAGAAATTCTTGCGGTTGTCGTGTACGTTGCAAACCGTTGTTGCTTACGCTGTCACGACCGACCATCTTTGCTAATGCCGTCGACCACTGGCCATCGCACTTGGCTGTCGAAACACTAGGTTTTCATAATGCTAAGAAAAAAGAGAAATGAGAGAGAAGGCTGAGATATATTTTGATCGTTATCCCATTTTGGAATTTTTTTGTGTAACCACACCTTGAGGAGAAGTTGTGTTTTAGGTGCGGGTAATGATAGGAATGTCATTAGGGTGGAATTAGAAATATTAGTAATTGTATATTAGAAATTATTTAAGAATGTTCGGGTATTTGGTTAGAAATAAAGGGAGTGTGAAAGGAGAAAGTTAGACATTGATTTAGTTGGTTTTGGACTTGAGTGATCTCAAGAGAGGGAGGGTCCAAGTACCTCGAAACATTTGGTTTATCTTGTAGTTTGATTATCTTTTACATTGCAATATATGTCAGGTTCTATCATATATTCTAGCAAAAGAGAGAACACGCAACCTAAAAACTTTAGTGATGAGGGTCCTAAGCCTAACTGGGAGGATAAAAAAATAAAGGGCCTCCGGTCTAAGTTGATGAGCAAGCGAGTGTTATAAAAGGAATGATGATGATGTAAACAGTAAAAAAAAAATAAAGGGCTTAGAGGGCATGGGTTCAATCCTTGACAACCAAATGTAGTAGGGTCAGGCGGTTGTCCCGTGAGATTAGTCGAGGTGCGTGTAAGCTGACCCGGACACTCACAAATATTAAAAAAAAAAAAATAAAGCACTCCTAGAGGAGGCTGTAAACTCTACACTTTCACAAATAAAAATATCAAAAGAAGACGATTTATCTAAGAATAGCCTGCTATTTCTTTCTCCAAATCATCCAGAGAAGTGCTCTGCTAGCACTATTCTATGAAATCTTTGCTTTTTTCTTAAACCACCAACCTGACAGCACCAACATCAAACCATCTTCTACATTTCTATGGGATCACCAAGCCAAATAAAAAAAATTGCAAATAAACATCCACCGCTGTACGTGAGTTGGCAATGAAGGAAAAAGTGATTGCTTAATTCTGAATTTTTGTTGCAGAGAGGACACATTGGGAGAAAGAGCTATAAATGGGTGTCTTCTTTGCACTTTAACCATTGTATTTTAAACTTTGATGAGCTAAAGGCCAAATGAAAAATTTTAGTTTCTTGGGCATGTTTCCTTCCCAAATTGTCTTCGACAGTAGCTTGTTAAGATAAAGTGTATTTGCTTGGAGTAAGAAAGTTGCTCATTTGCTAGTAAAAGACCTTGTGTTGTCTGGAATCCGCTTCATTCTGTCTTCCTCTCCATTTGGTCTGATTCCTTCAAGAATGCCTATTAAATTTTCCCATTCTTCCAACTCTCTATCAAGAAGCCGTCTTCTAAGATTTAGATTCCAAATGTTGAGAATCTTAAAAGAAAGCAACCTAGTGAAGTTCCTAGGATGAAGCAAGTGGTTCATAGAATTGACTTTCATATCCATAATTCATCAAGATGAGGAAAAGACAATTTGGGAAGGAAACATGCCCAAAGGAGGTAGGCTGACCCTTATTCGTTCTGTTTTAAGTGGTATCCCTATTTATTTCTTTTCCCTCTTTAAAGCCCCTTGTTCGGTTTGTAAAGTTATTGAGAAGTTGATGAGGGACTTTTTATGGGAAGGGGTGGATGAGGGTAAGAGTACGCATCTAGTGCGTTGGGATCTTGTGGGGCATTCCTTAAGGCAGGGGGTTAGAGATAGGTAACTTGAGGATACGCAACAAGGCTTTACTGGCAAAATGGCTTTGGAGGTTCTATTTGATTCCAACACCCTATGGCATAGGATTATTGTTAGTAAACACGGACCCCACCCTTCCGAATGGGTAACATGGGGGATCAAAGGCACTTCCAGAAACCCTTGGAGAGAAATTTCGCGTGAACTCCCTTCTTTGGCCTCTTTTATTCATTGCTCGGTGGGGAATGGAGAGGACACTTATTTTTGGGAGGACAGATGGGTGGGGGATAGACCCCTTTGCGTTACCTTTCCTCGGCTCTATCATCTCTCTTCTATGAAAAATCATTTCGTGGCCGAGGTTCTGATTCCTCAGGGAGCTCTCTTTCTTATTGCTTTGGCTTTGAGCGTCCGTTTTCTGATCGTGAAACAACGGACCTCGTGACTCTCCTTTCTTTGATTGGGGAAATCACTTTTAGTACCACTAGGAAAGACATTCGAGTCTGGAGTCCCGATCCTTCCCTCGGGTTTTCTTGCCGATCCTTCTTCCGTTGCCTTTTGGACCCTGTTTCCTCTGAGCCGTCCATTTTCTCTTTATTGTGGAAGGTGAAAGTTCCAAAAAAGGTGCAATTTTTCATTTGGCAGGTGATCCATGGAAGAGTTGATACTCTTGATCGACTGTCCAGAAAGATTCCTAGTTTGTTTGGGCCTTTTTGTTGCCTTTTTTGTCGGATGGCAGAGGAAGACCTCAATCATATGTTATGGAACTGCGCTTTTGCTAGGACAGTGTGGGTTGAGTTCTTTGGCTCGTTCGGGTTGCAGTTTGCCAGACACAGATGCCTCAGAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCTGGGATTTGTGCTATTATTTGGGGATTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGGATAGAGAGGGACCCTATTGAGGTTTGGTCCCTAGTTAAATATAATGTTTCTCTTTGGGCGTCGGTGACGCGTTTATTTTGTAATTATTCCTTAGGTCTCATCATTTTGGATTGGAGTCCCTTCATTTGAAGGGATTCCTCTTTCTCGGGCTTGTTTTTTGTTTGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGCATGGTCCTTTATCAAAAAAAAAATAATTCATCAAGATGGATATAAGCAAACAGGGACACTATTTTTATCAAATAATTGCTCGCATAGATGGCCCATTCTAGAGTCAAACATGACCACTATCTTCCATCTGAATCAATTGCGTGGATCAACTTCCATGATAAAGTTGACTGAAGGGTGTAAGATTCACATGATGACGTCCACAGCTAGTGCCATGAACTTGATAAATAATCTCTTCCACTATTTTTTCTTAAAAAGATCATAAACAAAGAATGACGTGCAAAGGGGGGGCCTTGGCCGACAAAAAAACCATGGGGCAGTGGGACAAATTTTCCTTTTTAAAGGGGATAAATCTTACAAAATCCCTCCAATCCTAGTGTAGTTACCAAAGAACTTATGTGATGGTTGAGCACTCCTATTTGAGGCAATGAACAGTACAACATCATGAAAAAAATTCTGAAAAGTTTGGCTTATGTGTAAAAATCCTAGCCATCCTTTCCTTCAAAGAGCCATAAAGGAGCGCTAGAGGCGTTAATCATGGCATCCCTTCCTCCAAAGAAACTACAAAAAAAACTACAAAGGGATAAGCATCCCTTCCTCCAAAGAAACTACAAAAAAGCCTTCCATTGAAGGTTAATCATGGCAGCTGAGTAATTACAAAAAAATCCTATCTTGGGCACTCCAATTAGAGGCCGAAAGCTGTTAAGCATCACAAAAAATATCAAAAAGCAAGAACTTATCTGTGAACGCGTTTCTTTCCTTCCGCAAGTGCCAAATGATAGCTCTAGAGGAATTTCGCCATAGGACTCTAGCTTTATCCTTTAAATCAACCTCCTGCCAGCACCTCACTCAGCCAAAATTAACCACGCATTTAGGCTTACAGCCCTCCTGCCCAAAAGCTCAAACAAACTGATTCCAAACCTTATCAGCAAACTCACAGTACAACATCACAACTTGAACGAACCTCAGGGAATCACTCTTCCACCATTTCTTTTAACAAACCCTATTTTATAAGCTAGATAATCCCAGCCAACCATTACGTTGGGCTTTGGCATTTTTCTTTGTTTCTCGTTGTTCATATATCCTTCAATCTTTTTAACAAGAAATCAAACTTTTCATTGATGAAATGAAAAGAGATTAATACTCAAGTGATACAAAACTCCAAAGGGGAGAAAAAGCTAAAAGCATAAAGTGAAGCAAAAGGAAGCATAAAGTTACAAAAATCATTGCTAGTAACCCTTGAATATTGATGAAAGAGAGCACCAATGAGAAGATCTGATCTTGATAAGCTCGAAACAATCTGATGAACAAAGATATTTATCCTAAAAGATTCTTTGGTCGTGCTTGAACCAAACGTCGGAGAGTAACGTTAGAGGCATTGATCCAAAGAAGCTTTACCTTGGAAGAGATACAGAGTTCTAAAGCCCCATTTGGTAACCATTTGGTTTTTGGTTTTTGAAAATCATGCTTATTTTCTCATAATTTCCTTGTAATGATTTTCATCTTTGTTAAGGACACATTTGAATTCTTAGCCAAATTCCAAAACAAAAACAAAGTTTTTGAAAACTACATCTTTTAGCTTTCAAAACTTGATTTGATTTTTGTAAACATGGAGAGGAGGTAGATAACAAAACAAAGAAATTTATAGGTGAGTGGAGGTAGTGTTTATAAGCTTAATTTCCAAAAACTAAAATCAAGAAAAGCAAATGGTTATTAAACAGGGTCTAAGTAATTGAAAGTAATTGAAAGACCTTTGAATAAATATCTCCCCTAAAAACCCAATTTATGTTGAAAATTGAGAATAATGCAAACCGGCAATGATTTGAGAAAGAACATCGAAAGATGTGAACTTGGTCTTCAAAAGCTTGCATATAAGGATGAAACAAAAGGACCAACCAAAGAAGACAAAGACGTCTTAACAAACCTAGGGAAGGAAATTACAAAAAATGCTTCTCAATTTATTACGAAAGATTTAAAATTATAACAATTCACCTGTAGGCCAGGTGACAAACTTTTGTATAGCCCTTCTCTTTTGTACTTTCATATTTCTCACTGATCGTTGGTTTCTTATCCCCTGAACAAAGTATAAGTAGCGAGGTGTACTGCTCTACTTGGGATATATATATATATATATATTTATAATGTCATCATTCCCTTGTTATGTGATTGCCGTACCCAATCAGCCTTAGATTTTAGTCAAATTAATACTATGTTTCATTACAGATGTAGTCATGATATGAAGCTATTGCAACATGCAATATCGTTTTAGCACACATTCATGTATATGTTATATTTGTTGATTTTTGTGCGGATATGGAAATATCTCCTTTCTATTCCATCAACTAGGGAAATTATTGTATATTACAATAATTTGCTTTGCCATAGTTGTTTTGTTGAAGAAACACGAGCATTAAACCTTGAAACCTGGATTATTTTGGTGATAGATGTTTTTAACTTTTTATAGTAACATATTGCCTGTTTCAAAAAGAGAAAAGGTAACATATTGCATGTATATTAACAATAGTCTGCTTTGCCGTAGCTATTTTGCTGGAGATACCTGAGCCTTACACTTTAAGATCCAGATTATTTAAGTGACAACCGTCTGTTTAGGAGCTGTAAATAGATATTTTAAGTTCCAATATTATACGTTGAGTTGATTGATGAAGACCACCATTTGGGTTTCCATCATTGTTATCTATACCCAACTCAGAAATTTACCCATTTTCTGTTGTGCCAATGTGCTGATATTTTTTTTTTATTTTCGTTTCATCAAGGGATATGCACTGATCGAATACGAGAACTTTGAGGAAGCAGAGAAAGCAATATCTGCCATGGATGGATCTGAACTCCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACACAAGGTATGCTTCTCCAAGATCCGTTCAAGATTATCAAATGTTTGTATTATAGGAAATTCACAAACCATGTATGTATTATTTTTCTACTTTAATTGCTGCAGGCCTACTCGGGAACGACGTTCGAGGAGCCCTAGGAGGAGATATTGA

mRNA sequence

ATGGCGAGCGCCGATGTTGAGGCTGTCGACTTCGAGCCCGAGGAAGACGACCTCATGGACGAGGATGGAGCTGCCGAAGCCGATGCCTCCCCGCGAGCTCCTTTTCCTAAGCTCAAATCTGCCATTACCGGCGGCGCATCTTCCTCGCCGGCCGGTGGTCCGAAGAAGACCAAGGGTCGTGGTTTCCGAGAAGAATCTGATCGCAACACCCGCCTTGCTGGGTCGGACTTCGATTCCCTCAAGTCTGCTGACGGCCCTGGCCCCCAACGATCTATTGAAGGATGGATCATTCTGGTAACTGGTGTACATGAAGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTCGACCGTCGTACTGGGTTTGTCAAGGGATATGCACTGATCGAATACGAGAACTTTGAGGAAGCAGAGAAAGCAATATCTGCCATGGATGGATCTGAACTCCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACACAAGGCCTACTCGGGAACGACGTTCGAGGAGCCCTAGGAGGAGATATTGA

Coding sequence (CDS)

ATGGCGAGCGCCGATGTTGAGGCTGTCGACTTCGAGCCCGAGGAAGACGACCTCATGGACGAGGATGGAGCTGCCGAAGCCGATGCCTCCCCGCGAGCTCCTTTTCCTAAGCTCAAATCTGCCATTACCGGCGGCGCATCTTCCTCGCCGGCCGGTGGTCCGAAGAAGACCAAGGGTCGTGGTTTCCGAGAAGAATCTGATCGCAACACCCGCCTTGCTGGGTCGGACTTCGATTCCCTCAAGTCTGCTGACGGCCCTGGCCCCCAACGATCTATTGAAGGATGGATCATTCTGGTAACTGGTGTACATGAAGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTCGACCGTCGTACTGGGTTTGTCAAGGGATATGCACTGATCGAATACGAGAACTTTGAGGAAGCAGAGAAAGCAATATCTGCCATGGATGGATCTGAACTCCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACACAAGGCCTACTCGGGAACGACGTTCGAGGAGCCCTAGGAGGAGATATTGA

Protein sequence

MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRKNTRPTRERRSRSPRRRY
Homology
[Close]
BLAST of Lag0034924 vs. NCBI nr
Match: XP_022961208.1 (RNA-binding protein Y14-like [Cucurbita moschata] >XP_023516370.1 RNA-binding protein Y14-like [Cucurbita pepo subsp. pepo] >KAG6590187.1 RNA-binding protein Y14, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023840.1 RNA-binding protein Y14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.1 bits (967), Expect = 9.3e-101
Identity = 194/197 (98.48%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSS AGGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120
           GFREESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFREESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180
           I+NLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPTRERRSRSPRRRY 198
           NTRPTRERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 197

[Close]
BLAST of Lag0034924 vs. NCBI nr
Match: XP_022988215.1 (RNA-binding protein Y14A-like [Cucurbita maxima])

HSP 1 Score: 373.2 bits (957), Expect = 1.3e-99
Identity = 192/197 (97.46%), Postives = 194/197 (98.48%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSS AGGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPLAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120
           GFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFRQESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180
           I+NLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPTRERRSRSPRRRY 198
           NTRPTRERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 197

[Close]
BLAST of Lag0034924 vs. NCBI nr
Match: XP_038880227.1 (RNA-binding protein Y14A [Benincasa hispida])

HSP 1 Score: 372.5 bits (955), Expect = 2.3e-99
Identity = 191/197 (96.95%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSS AGGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120
           GFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPTRERRSRSPRRRY 198
           NTRP RERRSRSPRRRY
Sbjct: 181 NTRPARERRSRSPRRRY 197

[Close]
BLAST of Lag0034924 vs. NCBI nr
Match: XP_004139049.1 (RNA-binding protein Y14 [Cucumis sativus] >XP_008450386.1 PREDICTED: RNA-binding protein 8A-B [Cucumis melo] >KGN66511.1 hypothetical protein Csa_007313 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 3.9e-99
Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSS +GGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR 60

Query: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120
           GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPTRERRSRSPRRRY 198
           N RP RERRSRSPRRRY
Sbjct: 181 NARPARERRSRSPRRRY 197

[Close]
BLAST of Lag0034924 vs. NCBI nr
Match: XP_022154366.1 (RNA-binding protein Y14A [Momordica charantia])

HSP 1 Score: 368.6 bits (945), Expect = 3.3e-98
Identity = 192/197 (97.46%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSS A GPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKKTKGR 60

Query: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120
           GFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYE+FEEAE+AISAMDGSELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAERAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPTRERRSRSPRRRY 198
           NTRPTRERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 196

[Close]
BLAST of Lag0034924 vs. ExPASy Swiss-Prot
Match: B7FAL5 (RNA-binding protein Y14A OS=Oryza sativa subsp. japonica OX=39947 GN=Y14A PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.3e-65
Identity = 138/205 (67.32%), Postives = 164/205 (80.00%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAG--GPKKTK 60
           + +ADVEAVDF+P++DDLMDED    AD +P AP P+L+S I GG      G  G +KTK
Sbjct: 4   VTNADVEAVDFDPDDDDLMDEDA---ADPTP-APAPRLRSTIAGGGGGGGGGDDGQRKTK 63

Query: 61  GRGFREE-SDRNTRLAG----SDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQN 120
           GRGFR++ + R++RLAG    SDFDSL S  GPGP RSIEGWI+LVTGVHEEAQEDDL N
Sbjct: 64  GRGFRDDAAPRDSRLAGAGRASDFDSLGSDGGPGPVRSIEGWIVLVTGVHEEAQEDDLHN 123

Query: 121 AFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFS 180
            F +FG++KNLHLNLDRRTGFVKGYALIEYE FEEA+ AI A+DG+ELLTQII+VDWAFS
Sbjct: 124 IFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAFS 183

Query: 181 HGPIRRKNTRPTRERRSRS-PRRRY 198
           +GP++R+N R    RRSRS PRRRY
Sbjct: 184 NGPVKRRNIRKRSPRRSRSPPRRRY 204

[Close]
BLAST of Lag0034924 vs. ExPASy Swiss-Prot
Match: F4I9J7 (RNA-binding protein Y14 OS=Arabidopsis thaliana OX=3702 GN=Y14 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.5e-65
Identity = 140/206 (67.96%), Postives = 161/206 (78.16%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSPAGGPKKTK 60
           MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTK
Sbjct: 1   MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGES----AKKTK 60

Query: 61  GRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG 120
           GRGFREE  SDR  RL+  DF+SL S   PGPQRS+EGWIILV+GVHEE QE+D+ NAFG
Sbjct: 61  GRGFREEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFG 120

Query: 121 EFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGP 180
           +FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+G+ELLTQ ++VDWAFS GP
Sbjct: 121 DFGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGP 180

Query: 181 -----IRRKNTRPTRERRSRSPRRRY 198
                 RRKN+R  R +RSRSPRRRY
Sbjct: 181 SGGESYRRKNSRYGRSQRSRSPRRRY 202

[Close]
BLAST of Lag0034924 vs. ExPASy Swiss-Prot
Match: Q6ATR0 (RNA-binding protein Y14B OS=Oryza sativa subsp. japonica OX=39947 GN=Y14B PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-39
Identity = 99/203 (48.77%), Postives = 130/203 (64.04%), Query Frame = 0 

Query: 2   ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTK 61
           A+ DVE VD+   E EE+D MDED           P P + S            G  +++
Sbjct: 4   AAEDVEFVDYDRDEEEEEDAMDEDDRGGGRGGRALPVPHIVSQ-----------GVMRSR 63

Query: 62  GRGFREESDRNTRLAGSD---FDSLKSADGP--GPQRSIEGWIILVTGVHEEAQEDDLQN 121
           GR       R+T +  S+   FDSL  A  P  GPQRSIEGWI+LV+GV E+A+EDDL N
Sbjct: 64  GRLL----GRSTSVLASNRDRFDSLADAGNPGHGPQRSIEGWILLVSGVKEDAEEDDLYN 123

Query: 122 AFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFS 181
            F +FG +K+LHLNL+RRTG+ KGYAL+EYE+FEEA+ AI AM+G++LLT+ + VDWAFS
Sbjct: 124 TFSDFGHVKDLHLNLERRTGYAKGYALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFS 183

Query: 182 HGPIRRKNTRPTRERRSRSPRRR 197
            GPI++  +     RRSR+P RR
Sbjct: 184 RGPIQKLTSTRPLHRRSRTPPRR 191

[Close]
BLAST of Lag0034924 vs. ExPASy Swiss-Prot
Match: Q6PH90 (RNA-binding protein 8A-B OS=Xenopus laevis OX=8355 GN=rbm8a-b PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.2e-39
Identity = 82/143 (57.34%), Postives = 105/143 (73.43%), Query Frame = 0 

Query: 55  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQN 114
           KK KGRGF  +    TR+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ +
Sbjct: 33  KKRKGRGFGADEGTRTRIR-EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHD 92

Query: 115 AFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFS 174
            FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE ++EA  A+  ++G +L+ Q ++VDW F 
Sbjct: 93  KFGEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEALAAMEGLNGQDLMGQPVSVDWGFV 152

Query: 175 HGPIRRKNTRPTRERRSRSPRRR 197
            GP   K  R +  RRSRSP RR
Sbjct: 153 RGP--PKGKRRSGRRRSRSPERR 172

[Close]
BLAST of Lag0034924 vs. ExPASy Swiss-Prot
Match: Q28BZ1 (RNA-binding protein 8A OS=Xenopus tropicalis OX=8364 GN=rbm8a PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.8e-38
Identity = 82/143 (57.34%), Postives = 104/143 (72.73%), Query Frame = 0 

Query: 55  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQN 114
           KK KGRGF  +     R+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ +
Sbjct: 33  KKRKGRGFGADEGTRARIR-EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHD 92

Query: 115 AFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFS 174
            FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE ++EA  A+  ++G +L+ Q I+VDW F 
Sbjct: 93  KFGEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEALAAMEGLNGQDLMGQPISVDWGFV 152

Query: 175 HGPIRRKNTRPTRERRSRSPRRR 197
            GP   K  R +  RRSRSP RR
Sbjct: 153 RGP--PKGKRRSGRRRSRSPERR 172

[Close]
BLAST of Lag0034924 vs. ExPASy TrEMBL
Match: A0A6J1HB67 (RNA-binding protein Y14-like OS=Cucurbita moschata OX=3662 GN=LOC111461789 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.5e-101
Identity = 194/197 (98.48%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSS AGGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120
           GFREESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFREESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180
           I+NLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPTRERRSRSPRRRY 198
           NTRPTRERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 197

[Close]
BLAST of Lag0034924 vs. ExPASy TrEMBL
Match: A0A6J1JIZ0 (RNA-binding protein Y14A-like OS=Cucurbita maxima OX=3661 GN=LOC111485519 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.5e-100
Identity = 192/197 (97.46%), Postives = 194/197 (98.48%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSS AGGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPLAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120
           GFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFRQESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180
           I+NLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPTRERRSRSPRRRY 198
           NTRPTRERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 197

[Close]
BLAST of Lag0034924 vs. ExPASy TrEMBL
Match: A0A0A0M2V3 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G616290 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSS +GGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR 60

Query: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120
           GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPTRERRSRSPRRRY 198
           N RP RERRSRSPRRRY
Sbjct: 181 NARPARERRSRSPRRRY 197

[Close]
BLAST of Lag0034924 vs. ExPASy TrEMBL
Match: A0A1S3BNH9 (RNA-binding protein 8A-B OS=Cucumis melo OX=3656 GN=LOC103492008 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSS +GGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR 60

Query: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120
           GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPTRERRSRSPRRRY 198
           N RP RERRSRSPRRRY
Sbjct: 181 NARPARERRSRSPRRRY 197

[Close]
BLAST of Lag0034924 vs. ExPASy TrEMBL
Match: A0A6J1DNH7 (RNA-binding protein Y14A OS=Momordica charantia OX=3673 GN=LOC111021647 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98
Identity = 192/197 (97.46%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSPAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSS A GPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKKTKGR 60

Query: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120
           GFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
Sbjct: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYE+FEEAE+AISAMDGSELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAERAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPTRERRSRSPRRRY 198
           NTRPTRERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 196

[Close]
BLAST of Lag0034924 vs. TAIR 10
Match: AT1G51510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 248.4 bits (633), Expect = 4.7e-66
Identity = 140/206 (67.96%), Postives = 161/206 (78.16%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSPAGGPKKTK 60
           MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTK
Sbjct: 1   MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGES----AKKTK 60

Query: 61  GRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG 120
           GRGFREE  SDR  RL+  DF+SL S   PGPQRS+EGWIILV+GVHEE QE+D+ NAFG
Sbjct: 61  GRGFREEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFG 120

Query: 121 EFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGP 180
           +FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+G+ELLTQ ++VDWAFS GP
Sbjct: 121 DFGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGP 180

Query: 181 -----IRRKNTRPTRERRSRSPRRRY 198
                 RRKN+R  R +RSRSPRRRY
Sbjct: 181 SGGESYRRKNSRYGRSQRSRSPRRRY 202

[Close]
BLAST of Lag0034924 vs. TAIR 10
Match: AT3G11400.1 (eukaryotic translation initiation factor 3G1 )

HSP 1 Score: 58.5 bits (140), Expect = 6.8e-09
Identity = 29/99 (29.29%), Postives = 57/99 (57.58%), Query Frame = 0 

Query: 73  AGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRT 132
           AG+D    +SA G   +R  +   + VT + E+ +E DL   F  FG +  +++ +D++T
Sbjct: 195 AGAD----RSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKT 254

Query: 133 GFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWA 172
           G  +G+  + + + E+A++AI+ ++G      I+ V+WA
Sbjct: 255 GVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWA 289

[Close]
BLAST of Lag0034924 vs. TAIR 10
Match: AT3G11400.2 (eukaryotic translation initiation factor 3G1 )

HSP 1 Score: 58.5 bits (140), Expect = 6.8e-09
Identity = 29/99 (29.29%), Postives = 57/99 (57.58%), Query Frame = 0 

Query: 73  AGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRT 132
           AG+D    +SA G   +R  +   + VT + E+ +E DL   F  FG +  +++ +D++T
Sbjct: 222 AGAD----RSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKT 281

Query: 133 GFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWA 172
           G  +G+  + + + E+A++AI+ ++G      I+ V+WA
Sbjct: 282 GVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWA 316

[Close]
BLAST of Lag0034924 vs. TAIR 10
Match: AT5G64200.1 (ortholog of human splicing factor SC35 )

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = 0 

Query: 87  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYENF 146
           GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  
Sbjct: 8   GPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYK 67

Query: 147 EEAEKAISAMDGSELLTQIINVDWAFSHGPIRRKNTR--------PTRERRSRSPRR 196
           +EA KA+  +DG  +  + I V +A  +GP   K ++         +R  RSRSPRR
Sbjct: 68  DEAHKAVERLDGRVVDGREITVQFA-KYGPNAEKISKGRVVEPPPKSRRSRSRSPRR 123

[Close]
BLAST of Lag0034924 vs. TAIR 10
Match: AT5G64200.2 (ortholog of human splicing factor SC35 )

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = 0 

Query: 87  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYENF 146
           GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  
Sbjct: 8   GPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYK 67

Query: 147 EEAEKAISAMDGSELLTQIINVDWAFSHGPIRRKNTR--------PTRERRSRSPRR 196
           +EA KA+  +DG  +  + I V +A  +GP   K ++         +R  RSRSPRR
Sbjct: 68  DEAHKAVERLDGRVVDGREITVQFA-KYGPNAEKISKGRVVEPPPKSRRSRSRSPRR 123

The following BLAST results are available for this feature:
BLAST of Lag0034924 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961208.19.3e-10198.48RNA-binding protein Y14-like [Cucurbita moschata] >XP_023516370.1 RNA-binding pr... [more]
XP_022988215.11.3e-9997.46RNA-binding protein Y14A-like [Cucurbita maxima][more]
XP_038880227.12.3e-9996.95RNA-binding protein Y14A [Benincasa hispida][more]
XP_004139049.13.9e-9996.95RNA-binding protein Y14 [Cucumis sativus] >XP_008450386.1 PREDICTED: RNA-binding... [more]
XP_022154366.13.3e-9897.46RNA-binding protein Y14A [Momordica charantia][more]
BLAST of Lag0034924 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B7FAL52.3e-6567.32RNA-binding protein Y14A OS=Oryza sativa subsp. japonica OX=39947 GN=Y14A PE=1 S... [more]
F4I9J76.5e-6567.96RNA-binding protein Y14 OS=Arabidopsis thaliana OX=3702 GN=Y14 PE=1 SV=1[more]
Q6ATR01.2e-3948.77RNA-binding protein Y14B OS=Oryza sativa subsp. japonica OX=39947 GN=Y14B PE=1 S... [more]
Q6PH906.2e-3957.34RNA-binding protein 8A-B OS=Xenopus laevis OX=8355 GN=rbm8a-b PE=2 SV=1[more]
Q28BZ11.8e-3857.34RNA-binding protein 8A OS=Xenopus tropicalis OX=8364 GN=rbm8a PE=2 SV=1[more]
BLAST of Lag0034924 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HB674.5e-10198.48RNA-binding protein Y14-like OS=Cucurbita moschata OX=3662 GN=LOC111461789 PE=4 ... [more]
A0A6J1JIZ06.5e-10097.46RNA-binding protein Y14A-like OS=Cucurbita maxima OX=3661 GN=LOC111485519 PE=4 S... [more]
A0A0A0M2V31.9e-9996.95RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G616290 PE=4 SV... [more]
A0A1S3BNH91.9e-9996.95RNA-binding protein 8A-B OS=Cucumis melo OX=3656 GN=LOC103492008 PE=4 SV=1[more]
A0A6J1DNH71.6e-9897.46RNA-binding protein Y14A OS=Momordica charantia OX=3673 GN=LOC111021647 PE=4 SV=... [more]
BLAST of Lag0034924 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G51510.14.7e-6667.96RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G11400.16.8e-0929.29eukaryotic translation initiation factor 3G1 [more]
AT3G11400.26.8e-0929.29eukaryotic translation initiation factor 3G1 [more]
AT5G64200.11.2e-0831.62ortholog of human splicing factor SC35 [more]
AT5G64200.21.2e-0831.62ortholog of human splicing factor SC35 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008111RNA-binding motif protein 8PRINTSPR01738RNABINDINGM8coord: 51..63
score: 50.77
coord: 86..100
score: 79.33
coord: 160..172
score: 55.38
coord: 142..158
score: 44.12
IPR008111RNA-binding motif protein 8PANTHERPTHR45894RNA-BINDING PROTEIN 8Acoord: 2..197
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 96..169
e-value: 2.2E-19
score: 80.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 97..161
e-value: 9.5E-16
score: 57.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 95..173
score: 15.834971
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 45..190
e-value: 7.5E-30
score: 105.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..197
NoneNo IPR availablePANTHERPTHR45894:SF6RNA-BINDING PROTEIN Y14A-LIKEcoord: 2..197
IPR033744RBM8, RNA recognition motifCDDcd12324RRM_RBM8coord: 89..176
e-value: 8.8976E-61
score: 182.417
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 88..196

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0034924.1Lag0034924.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010628 positive regulation of gene expression
biological_process GO:0008380 RNA splicing
biological_process GO:0006396 RNA processing
cellular_component GO:0005737 cytoplasm
cellular_component GO:0035145 exon-exon junction complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding