Lag0034913 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0034913
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionAcetyl-CoA acetyltransferase
Locationchr3: 12317078 .. 12319882 (+)
RNA-Seq ExpressionLag0034913
SyntenyLag0034913
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTCAGGTTCGATTTCTCTTTTTCAATTCCTTGGTTGTTAAAGTTAATAATTTTGTTTTTGTGAAGCACTCATAGGATTTTTTCACTTATACATTCTTATTCAGGTCAACAATTTGGGTCTCTCCCTGGGCGAATTGTTTTTTCTTGGTATGATTTCCTTTTATTCAGGTCAACAACATGGGTATCTCACTGTCTTCTAACTTAGATGTTGCATCTATGGTGAATATGCTAGCTAATTGAAAGAGTAGCCATACCTATTCTTTCTTATCTTTTGACCTCACAAATTAAAATTAGTACTGTATTCTCCATCCTTCCAGAACTTTTTGGTTATGATTCTCGATTTTAATTTCAGGAGGTTCTATACTTGGGGTGAAGTTTCTAGATCTCCATAGTTTATCTCTATCTTGGGTGTTTCAGAGGTTTGTAGGCCAACCTTTGTTATTTTTTCTAAACCATTCTCTAAATGCATTTTTCGTCATTTTCAAAGTTTAACTTGTTGGGTGAAATCTCGTTTGTCCTAAACTTGCCTCTCCCTATAAGTTTACGTTCTTGTTAATTGTTCTAAAACTAGTAGCGATTTGAATTCTGTAACCAGAAATTGTTGTCATTGGTCTGAACTTAGTAGGTGTTCTCTAAATGCATTTTTCATCCTTTTCAAAGTTGAACTTTTTGGGTGAAATCTCATGTGTCCTAAACTTGTCTCTCCATATAAGTTTACGTTATTGTTAATTGTTCTAAAACTAGTAGGGATACAAATTCTGTGACCAGAAATTGTTGTCATCTGTCTGAACTTAGTAGGTGGGCTGAATTTAGGGATGGTGGGATATTTTCTAAAGTATTTTCTATTTAAGACCGTTAAAAATGTCTTTCTTGAAAAGATCAGGTTGTATAACTTCTGACCTCATTCTTATTCCTTTCCTAAGCATTGTCCTCTATCATCTTGAGGACAACAAAAATTATGTAAAAGTGTGGAGATCTTTATCTAGTTTAGTGGGAGTTAGTTTGAATGTGGAAGGTTGCTGATTTAGCCTCTTAAGATATGGCTCTTTTGGAAAAATGGTTGCGAGATTTTCCCACGAGAGTCTAATGCTCCGTGGAACAAGATTGTGGCAAACATCATTCTGAAACACCCCCAAATCTTATCATGTACTGAGTTGTTGACTATTCCACATCTTTGTTTCCATGAAATACTAGACAAAGGGAGGTTTTGATGTTTTTTTGAACTGCACATGTTTCTTCTTACCTACTCATAGGAGCATAATAGCTAGTTATAAGTTTAGTTTCACTTGCTTTCCATTGTAATTTTTAGCTCTTTTTGATTCTTGATGCATTCAATTTTAGAACCATTAAGATTAATAAGCAGTATCTAGTCGAATGAGTTGCAAATTGTGATTATGGGAATGTGAAAGATATAACCGAATGGAGCAATATTGTTCAATTTTAGTTTGATTTTACTGGTGTTGTTTGTTTATTTCGAATGAAAAAGATCTTTTTGTATATCCTTTCTATTCTTTCAGTCCTTTTCAATGAAAACATGATTTCCAATTAAAAAAGAAGAAGGCATTGGATTAATTGAATGACTCATCCAGAAAATTTAAATGACCTTGAATGTTTGGCCTAGATTTTTTTTTTCACTCAATTGGGTTTGAGCAAAGTTCTGTATTTAGTCCCCATTTCTTAAATAAACTAGTTATTCTCATAGGATTGTTTAACATTTTTTTTCTCAAATATGATCATAATTAGTTCTCTTGGTGTTATGTCTTTGTGAAGCAACACCTTATTGGTTGTAGGTAATACACTAGTCTGGGTTAGAAATTGTTTCTTCTAACTTCTGAAGTGCAAGTTTCTGTGTACAACTACTGTGGTTCTTCAAAAACTTTGATACCATTTTTCTAAGAGTCTTGAGTCTTGTTGTTCATCTTGCCAAAAGGGGTTGCAGGTTTAACATTGAACTTTGAACTTAGAGGCTTTGTATGACTTCATCTTTCTTCTTTTATTGTGTGTATTTAGATTTGCCACTTATTACTTTTATTGTGTGCATTTACAACACTTGGTTAATTTTGTTTTAGCATGTGCTTCAGCTAACAAATTTGGGTGAACTGGTAGTTGTTTTGAGTTTCTAGGATCTTGATTCCATAGTTTTCTCTTGTAAATCTTTTCTGGAATTCTTAGTTTCCTCCCATGTTGACCGACCCCCTTGCTAAGTTGGGAAAGGGAAAACCAGAAGAAAACCAAGTTCTTTAATTTGCTTGTTGCTCATGGAGGATCAACATTATGAATGTTATTTTGGTTCCCAGTTATGAGCTTTTGTCTTGTTTTATATAGATACATAGAAAAAAATCCAATTCGTTTGTGATTTCTTATTTTTGTGCATTTGCTTGTTGAATACAGGGACAAAGTTAATGTTCATGGGGGAGTTGTATATCTTTGGGACACCCACTGGGCTGTAGTGGAGCTTAGATTTTGGTCACATTTTTGGGGGTAATTTATGTCACTCCGGTTGTATTGGAGCTCAAATCTTGGTTACATTGTTAGAAATGATATTTGGTTCTCTTTCTCTCTTCAATATTTTTCATCATGTTTCCTCAAGTAACTATGACCTTTGAGAGGCTGCGACTGCTGCTGATAGGAGAAGGAGTATGCTTGAGGAATATTCTCTGTTGTTCTCTACTTATGGTTACATTATTACAGAAGAAGCATCTTTGATGCAGGTACTGAGACAGAAAAATGGCAAGTATGGGGTTGGTGCTGTCTGCAATGGTGGTGGAGGGGCATCTGCTCTTGTGATTGAACTAATGTAA

mRNA sequence

ATGCTTTCAGGAGGTTCTATACTTGGGGTGAAGTTTCTAGATCTCCATAGTTTATCTCTATCTTGGGTGTTTCAGAGGGACAAAGTTAATGTTCATGGGGGAGTTGTATATCTTTGGGACACCCACTGGGCTGTAGTGGAGCTTAGATTTTGGTCACATTTTTGGGGGAGAAGGAGTATGCTTGAGGAATATTCTCTGTTGTTCTCTACTTATGGTTACATTATTACAGAAGAAGCATCTTTGATGCAGGTACTGAGACAGAAAAATGGCAAGTATGGGGTTGGTGCTGTCTGCAATGGTGGTGGAGGGGCATCTGCTCTTGTGATTGAACTAATGTAA

Coding sequence (CDS)

ATGCTTTCAGGAGGTTCTATACTTGGGGTGAAGTTTCTAGATCTCCATAGTTTATCTCTATCTTGGGTGTTTCAGAGGGACAAAGTTAATGTTCATGGGGGAGTTGTATATCTTTGGGACACCCACTGGGCTGTAGTGGAGCTTAGATTTTGGTCACATTTTTGGGGGAGAAGGAGTATGCTTGAGGAATATTCTCTGTTGTTCTCTACTTATGGTTACATTATTACAGAAGAAGCATCTTTGATGCAGGTACTGAGACAGAAAAATGGCAAGTATGGGGTTGGTGCTGTCTGCAATGGTGGTGGAGGGGCATCTGCTCTTGTGATTGAACTAATGTAA

Protein sequence

MLSGGSILGVKFLDLHSLSLSWVFQRDKVNVHGGVVYLWDTHWAVVELRFWSHFWGRRSMLEEYSLLFSTYGYIITEEASLMQVLRQKNGKYGVGAVCNGGGGASALVIELM
Homology
[Close]
BLAST of Lag0034913 vs. NCBI nr
Match: KAG6406961.1 (hypothetical protein SASPL_129941 [Salvia splendens])

HSP 1 Score: 65.1 bits (157), Expect = 4.5e-07
Identity = 41/89 (46.07%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 27  DKVNVHGGVVYLWDTHWAVVELRFWSHFWGRR---SMLEEYSLLFSTYGYIITEEASLMQ 86
           ++VNVHGG V L                 G R   ++L    +L S     I  + +L Q
Sbjct: 346 ERVNVHGGAVSLGHPLGCS----------GARILVTLLGGIKILCSFKSIGIDVQIALSQ 405

Query: 87  VLRQKNGKYGVGAVCNGGGGASALVIELM 113
           VL+QKNGKYGVG VCNGGGGASALV+EL+
Sbjct: 406 VLKQKNGKYGVGGVCNGGGGASALVLELI 424

[Close]
BLAST of Lag0034913 vs. NCBI nr
Match: XP_011654773.1 (acetyl-CoA acetyltransferase, cytosolic 1 [Cucumis sativus] >KGN64993.1 hypothetical protein Csa_022719 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-06
Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = 0 

Query: 80  SLMQVLRQKNGKYGVGAVCNGGGGASALVIELM 113
           +L+ VLRQKNGKYGVGAVCNGGGGASALV+ELM
Sbjct: 372 TLLGVLRQKNGKYGVGAVCNGGGGASALVVELM 404

[Close]
BLAST of Lag0034913 vs. NCBI nr
Match: XP_023519996.1 (acetyl-CoA acetyltransferase, cytosolic 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06
Identity = 40/86 (46.51%), Postives = 47/86 (54.65%), Query Frame = 0 

Query: 27  DKVNVHGGVVYLWDTHWAVVELRFWSHFWGRRSMLEEYSLLFSTYGYIITEEASLMQVLR 86
           D+VNVHGG V L                         + L  S    ++T    L+ VLR
Sbjct: 346 DRVNVHGGAVSL------------------------GHPLGCSGARILVT----LLGVLR 403

Query: 87  QKNGKYGVGAVCNGGGGASALVIELM 113
           Q+NGKYGVGAVCNGGGGASALV+ELM
Sbjct: 406 QRNGKYGVGAVCNGGGGASALVVELM 403

[Close]
BLAST of Lag0034913 vs. NCBI nr
Match: XP_022973138.1 (acetyl-CoA acetyltransferase, cytosolic 1-like [Cucurbita maxima] >XP_022973139.1 acetyl-CoA acetyltransferase, cytosolic 1-like [Cucurbita maxima])

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06
Identity = 40/86 (46.51%), Postives = 47/86 (54.65%), Query Frame = 0 

Query: 27  DKVNVHGGVVYLWDTHWAVVELRFWSHFWGRRSMLEEYSLLFSTYGYIITEEASLMQVLR 86
           D+VNVHGG V L                         + L  S    ++T    L+ VLR
Sbjct: 346 DRVNVHGGAVSL------------------------GHPLGCSGARILVT----LLGVLR 403

Query: 87  QKNGKYGVGAVCNGGGGASALVIELM 113
           Q+NGKYGVGAVCNGGGGASALV+ELM
Sbjct: 406 QRNGKYGVGAVCNGGGGASALVVELM 403

[Close]
BLAST of Lag0034913 vs. NCBI nr
Match: XP_022927422.1 (acetyl-CoA acetyltransferase, cytosolic 1-like [Cucurbita moschata] >KAG6583668.1 putative acetyl-CoA acetyltransferase, cytosolic 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06
Identity = 40/86 (46.51%), Postives = 47/86 (54.65%), Query Frame = 0 

Query: 27  DKVNVHGGVVYLWDTHWAVVELRFWSHFWGRRSMLEEYSLLFSTYGYIITEEASLMQVLR 86
           D+VNVHGG V L                         + L  S    ++T    L+ VLR
Sbjct: 346 DRVNVHGGAVSL------------------------GHPLGCSGARILVT----LLGVLR 403

Query: 87  QKNGKYGVGAVCNGGGGASALVIELM 113
           Q+NGKYGVGAVCNGGGGASALV+ELM
Sbjct: 406 QRNGKYGVGAVCNGGGGASALVVELM 403

[Close]
BLAST of Lag0034913 vs. ExPASy Swiss-Prot
Match: Q8S4Y1 (Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana OX=3702 GN=AAT1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.5e-07
Identity = 23/33 (69.70%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 80  SLMQVLRQKNGKYGVGAVCNGGGGASALVIELM 113
           +L+ +L+++NGKYGVG VCNGGGGASALV+EL+
Sbjct: 371 TLLGILKKRNGKYGVGGVCNGGGGASALVLELL 403

[Close]
BLAST of Lag0034913 vs. ExPASy Swiss-Prot
Match: Q9FIK7 (Probable acetyl-CoA acetyltransferase, cytosolic 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47720 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.0e-06
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0 

Query: 80  SLMQVLRQKNGKYGVGAVCNGGGGASALVIELM 113
           +L+ VLR K GKYGV ++CNGGGGASALV+E M
Sbjct: 373 TLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405

[Close]
BLAST of Lag0034913 vs. ExPASy Swiss-Prot
Match: P41338 (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ERG10 PE=1 SV=3)

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04
Identity = 19/31 (61.29%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 80  SLMQVLRQKNGKYGVGAVCNGGGGASALVIE 111
           +L+ +L+Q+ GK GV A+CNGGGGAS++VIE
Sbjct: 366 TLLSILQQEGGKIGVAAICNGGGGASSIVIE 396

[Close]
BLAST of Lag0034913 vs. ExPASy Swiss-Prot
Match: Q12598 (Acetyl-CoA acetyltransferase IA OS=Candida tropicalis OX=5482 GN=PACTA PE=1 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-04
Identity = 20/31 (64.52%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 80  SLMQVLRQKNGKYGVGAVCNGGGGASALVIE 111
           +L+ VL Q+ G++GV  VCNGGGGASA+VIE
Sbjct: 365 TLLSVLTQEGGRFGVAGVCNGGGGASAVVIE 395

[Close]
BLAST of Lag0034913 vs. ExPASy Swiss-Prot
Match: P10551 (Acetyl-CoA acetyltransferase OS=Saccharomyces pastorianus (strain ATCC 76670 / Carlsberg bottom yeast no.2 / CBS 1503 / CLIB 180 / NBRC 10610 / NRRL Y-1525) OX=1429090 GN=ERG10 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-04
Identity = 19/31 (61.29%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 80  SLMQVLRQKNGKYGVGAVCNGGGGASALVIE 111
           +L+ +L+Q+ GK GV A+CNGGGGAS++VIE
Sbjct: 366 TLLSILQQEGGKIGVAAICNGGGGASSVVIE 396

The following BLAST results are available for this feature:
BLAST of Lag0034913 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6406961.14.5e-0746.07hypothetical protein SASPL_129941 [Salvia splendens][more]
XP_011654773.11.7e-0687.88acetyl-CoA acetyltransferase, cytosolic 1 [Cucumis sativus] >KGN64993.1 hypothet... [more]
XP_023519996.12.9e-0646.51acetyl-CoA acetyltransferase, cytosolic 1-like [Cucurbita pepo subsp. pepo][more]
XP_022973138.12.9e-0646.51acetyl-CoA acetyltransferase, cytosolic 1-like [Cucurbita maxima] >XP_022973139.... [more]
XP_022927422.12.9e-0646.51acetyl-CoA acetyltransferase, cytosolic 1-like [Cucurbita moschata] >KAG6583668.... [more]
BLAST of Lag0034913 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8S4Y13.5e-0769.70Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana OX=3702 GN=AAT... [more]
Q9FIK73.0e-0669.70Probable acetyl-CoA acetyltransferase, cytosolic 2 OS=Arabidopsis thaliana OX=37... [more]
P413381.3e-0461.29Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S... [more]
Q125981.6e-0464.52Acetyl-CoA acetyltransferase IA OS=Candida tropicalis OX=5482 GN=PACTA PE=1 SV=3[more]
P105511.6e-0461.29Acetyl-CoA acetyltransferase OS=Saccharomyces pastorianus (strain ATCC 76670 / C... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020617Thiolase, C-terminalPFAMPF02803Thiolase_Ccoord: 80..110
e-value: 3.0E-5
score: 23.6
IPR020610Thiolase, active sitePROSITEPS00099THIOLASE_3coord: 93..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0034913.1Lag0034913.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups