Lag0034883 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0034883
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr3: 11974792 .. 11975388 (+)
RNA-Seq Expression	Lag0034883
Synteny	Lag0034883

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATGTAAGGATCAAATGGCTATAGCGCTGGGCGTTAAACATGTGAGTAAGATTGGCAGATACTTGGGGTTGGACATTGAATTTGGTGTATCGAAGAAAGCGATGTTTGATAATATTAAGCACAGAGTCGAAACGAGGGTTAAAGGTTGGGCCGAACAAATGTTGTCCAACGCCGACAAAGAGGTCTTGTTGAAGGCAGTCGCTTTAGCATTACCAATTTATGCCATGAACTGCTTTAAGATACCAATATCAATTTGTAAGGAGATAAACAACAAACTTGCTCAATTCTGGTGGCAGAAGAGGAAAGACAAAAGAGGCATCCATTGTGGGGCTTGGAAGGAGTTAACGAAGCATAAAAGTGAGGGAGGATTGAGTATGCGTGATCTCCATTGTTTTAATTTAGCCCTATTGGCAAAGCAAGGGTGGAGGATCTTAACCCAACCGAACACGTTGCTGGCCAGAATCTACAAAGCACGGTATTTTAAACATGGGGGGTTTTTAGAAGCTGAAGTCAAAGGAAGAGTGTCTTGGGGATGGATGAGTAGTATGGCGGGTCGTGTTGATGAAGGGGTTTCGATGGAGAGTGGGAGCTGA

mRNA sequence

ATGGAATGTAAGGATCAAATGGCTATAGCGCTGGGCGTTAAACATGTGAGTAAGATTGGCAGATACTTGGGGTTGGACATTGAATTTGGTGTATCGAAGAAAGCGATGTTTGATAATATTAAGCACAGAGTCGAAACGAGGGTTAAAGGTTGGGCCGAACAAATGTTGTCCAACGCCGACAAAGAGGTCTTGTTGAAGGCAGTCGCTTTAGCATTACCAATTTATGCCATGAACTGCTTTAAGATACCAATATCAATTTGTAAGGAGATAAACAACAAACTTGCTCAATTCTGGTGGCAGAAGAGGAAAGACAAAAGAGGCATCCATTGTGGGGCTTGGAAGGAGTTAACGAAGCATAAAAGTGAGGGAGGATTGAGTATGCGTGATCTCCATTGTTTTAATTTAGCCCTATTGGCAAAGCAAGGGTGGAGGATCTTAACCCAACCGAACACGTTGCTGGCCAGAATCTACAAAGCACGGTATTTTAAACATGGGGGGTTTTTAGAAGCTGAAGTCAAAGGAAGAGTGTCTTGGGGATGGATGAGTAGTATGGCGGGTCGTGTTGATGAAGGGGTTTCGATGGAGAGTGGGAGCTGA

Coding sequence (CDS)

ATGGAATGTAAGGATCAAATGGCTATAGCGCTGGGCGTTAAACATGTGAGTAAGATTGGCAGATACTTGGGGTTGGACATTGAATTTGGTGTATCGAAGAAAGCGATGTTTGATAATATTAAGCACAGAGTCGAAACGAGGGTTAAAGGTTGGGCCGAACAAATGTTGTCCAACGCCGACAAAGAGGTCTTGTTGAAGGCAGTCGCTTTAGCATTACCAATTTATGCCATGAACTGCTTTAAGATACCAATATCAATTTGTAAGGAGATAAACAACAAACTTGCTCAATTCTGGTGGCAGAAGAGGAAAGACAAAAGAGGCATCCATTGTGGGGCTTGGAAGGAGTTAACGAAGCATAAAAGTGAGGGAGGATTGAGTATGCGTGATCTCCATTGTTTTAATTTAGCCCTATTGGCAAAGCAAGGGTGGAGGATCTTAACCCAACCGAACACGTTGCTGGCCAGAATCTACAAAGCACGGTATTTTAAACATGGGGGGTTTTTAGAAGCTGAAGTCAAAGGAAGAGTGTCTTGGGGATGGATGAGTAGTATGGCGGGTCGTGTTGATGAAGGGGTTTCGATGGAGAGTGGGAGCTGA

Protein sequence

MECKDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGRVDEGVSMESGS

Homology

[Close]

BLAST of Lag0034883 vs. NCBI nr
Match: CAB4273082.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 215.3 bits (547), Expect = 4.7e-52
Identity = 94/184 (51.09%), Postives = 135/184 (73.37%), Query Frame = 0


Query: 4   KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEV 63
           K Q+A  LGV+     G+YLGL+ +FG SK+ +F+ ++ R+ +++ GWAEQ LS+A KEV
Sbjct: 661 KGQLAHILGVRQSGDFGKYLGLNADFGTSKRGVFEMVRKRIASKLLGWAEQYLSSAGKEV 720

Query: 64  LLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEG 123
           L+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+ +KD+RGIH  +W++L + K  G
Sbjct: 721 LIKAVAMAMPNYSMSCFKLPVSLCKEIERDIANFWWKGQKDRRGIHWVSWQKLCQFKKAG 780

Query: 124 GLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSS 183
           G+  RDL CFNLA+LAK GWRIL  PN+LLAR+ + +Y+ H  F+ A    +VSWGW   
Sbjct: 781 GMGFRDLLCFNLAMLAKIGWRILRNPNSLLARLLQEKYYVHSDFMHAVCGRKVSWGWKGI 840

Query: 184 MAGR 188
           + GR
Sbjct: 841 LQGR 844

[Close]

BLAST of Lag0034883 vs. NCBI nr
Match: CAB4279811.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-51
Identity = 93/184 (50.54%), Postives = 133/184 (72.28%), Query Frame = 0


Query: 4   KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEV 63
           K Q+A  LGV+H    G+YLGL+ +FGVSK+ +F+ ++ R+ +++ GWAEQ LS+A KEV
Sbjct: 621 KGQLAHILGVRHSGDFGKYLGLNADFGVSKRGVFEMVRKRIASKLMGWAEQYLSSAGKEV 680

Query: 64  LLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEG 123
           L+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+  KD+RGIH  +W++L + K  G
Sbjct: 681 LIKAVAMAMPNYSMSCFKLPVSLCKEIERDIANFWWKGHKDRRGIHWVSWQKLCQFKKAG 740

Query: 124 GLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSS 183
           G+  RDL CFNLA+L K GWRIL  PN+LLAR+ + +Y+    F+      +VSWGW   
Sbjct: 741 GMGFRDLLCFNLAMLTKIGWRILRNPNSLLARLLQEKYYVQSDFMHVVCGRKVSWGWKGI 800

Query: 184 MAGR 188
           + GR
Sbjct: 801 LQGR 804

[Close]

BLAST of Lag0034883 vs. NCBI nr
Match: CAB4310240.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-51
Identity = 93/184 (50.54%), Postives = 133/184 (72.28%), Query Frame = 0


Query: 4   KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEV 63
           K Q+A  LGV+H    G+YLGL+ +FGVSK+ +F+ ++ R+ +++ GWAEQ LS+A KEV
Sbjct: 683 KGQLAHILGVRHSGDFGKYLGLNADFGVSKRGVFEMVRKRIASKLMGWAEQYLSSAGKEV 742

Query: 64  LLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEG 123
           L+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+  KD+RGIH  +W++L + K  G
Sbjct: 743 LIKAVAMAMPNYSMSCFKLPVSLCKEIERDIANFWWKGHKDRRGIHWVSWQKLCQFKKAG 802

Query: 124 GLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSS 183
           G+  RDL CFNLA+L K GWRIL  PN+LLAR+ + +Y+    F+      +VSWGW   
Sbjct: 803 GMGFRDLLCFNLAMLTKIGWRILRNPNSLLARLLQEKYYVQSDFMHVVCGRKVSWGWKGI 862

Query: 184 MAGR 188
           + GR
Sbjct: 863 LQGR 866

[Close]

BLAST of Lag0034883 vs. NCBI nr
Match: CAB4274760.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-45
Identity = 88/182 (48.35%), Postives = 123/182 (67.58%), Query Frame = 0


Query: 6   QMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLL 65
           QM   L VK     G+YLG+  +FG SK+ +F+ ++ +++ ++ GWAEQ LS A KEVL+
Sbjct: 645 QMEQILQVKGRKDFGKYLGIMADFGASKRKVFEEVRRKLDGKLHGWAEQFLSPAGKEVLI 704

Query: 66  KAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEGGL 125
           KAVA+A+P Y M+CFK+P+++CKEI   +A+FWW+   DK GIH  +W +L++ K  GGL
Sbjct: 705 KAVAMAMPCYTMSCFKLPVTLCKEIEAAMARFWWKSHSDKNGIHWASWTKLSQLKKAGGL 764

Query: 126 SMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMA 185
             RDL CFN+ALLAK GWRIL  P++LLA +   +YF    FL A  +   SWGW   + 
Sbjct: 765 GFRDLQCFNMALLAKIGWRILHNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGILQ 824

Query: 186 GR 188
           GR
Sbjct: 825 GR 826

[Close]

BLAST of Lag0034883 vs. NCBI nr
Match: KAG7586949.1 (Reverse transcriptase domain [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 193.4 bits (490), Expect = 1.9e-45
Identity = 94/190 (49.47%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 11   LGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVAL 70
            LG+ HV   G+YLGL  +FG  K  MF+ I  RV+ R +GW+ + LS A KE+L+K++A+
Sbjct: 1049 LGIVHVGGGGKYLGLPEQFGRKKVEMFEYIVKRVKERTEGWSTKFLSPAGKEILIKSIAM 1108

Query: 71   ALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEGGLSMRDL 130
            ALP+Y+MNCF +P +IC EI + L  FWW K K KR I   AW+ +T  K EGGL  +DL
Sbjct: 1109 ALPVYSMNCFMLPHTICDEIQSVLTTFWWGKEKGKRKIPWVAWERMTLPKKEGGLGFKDL 1168

Query: 131  HCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR--V 190
            H FN ALLAKQ WRI+T P++LLAR+YK  Y  H  FL+A    RVS+GW S   G+  +
Sbjct: 1169 HNFNRALLAKQAWRIMTNPHSLLARLYKGMYHPHHSFLQAGTGNRVSFGWRSIQQGKELL 1228

Query: 191  DEGVSMESGS 199
             +G+ +  G+
Sbjct: 1229 QQGLRVRIGN 1238

[Close]

BLAST of Lag0034883 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.0e-26
Identity = 55/119 (46.22%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 70  LALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHK-SEGGLSMR 129
           +ALP+YAM+CF++   +CK++ + + +FWW   ++KR I   AW++L K K  +GGL  R
Sbjct: 1   MALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 60

Query: 130 DLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR 188
           DL  FN ALLAKQ +RI+ QP+TLL+R+ ++RYF H   +E  V  R S+ W S + GR
Sbjct: 61  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGR 119

[Close]

BLAST of Lag0034883 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 52/160 (32.50%), Postives = 79/160 (49.38%), Query Frame = 0


Query: 34  KAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNK 93
           K  F  I  RV +R+ GW E+ LS A +  L KAV  ++P+++M+   +P SI   ++  
Sbjct: 10  KDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQL 69

Query: 94  LAQFWWQKRKDKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLL 153
              F W    +K+  H   W ++   K EGGL +R     N AL++K GWR+L + N+L 
Sbjct: 70  SRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLW 129

Query: 154 ARIYKARYFKHGGFLEAE----VKGRVSWGWMSSMAGRVD 190
             + + +Y  H G +        KG  S  W S   G  D
Sbjct: 130 TLVLQKKY--HVGEIRDSRWLIPKGSWSSTWRSIAIGLRD 167

[Close]

BLAST of Lag0034883 vs. ExPASy TrEMBL
Match: A0A6J5UAY2 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20161 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.3e-52
Identity = 94/184 (51.09%), Postives = 135/184 (73.37%), Query Frame = 0


Query: 4   KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEV 63
           K Q+A  LGV+     G+YLGL+ +FG SK+ +F+ ++ R+ +++ GWAEQ LS+A KEV
Sbjct: 661 KGQLAHILGVRQSGDFGKYLGLNADFGTSKRGVFEMVRKRIASKLLGWAEQYLSSAGKEV 720

Query: 64  LLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEG 123
           L+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+ +KD+RGIH  +W++L + K  G
Sbjct: 721 LIKAVAMAMPNYSMSCFKLPVSLCKEIERDIANFWWKGQKDRRGIHWVSWQKLCQFKKAG 780

Query: 124 GLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSS 183
           G+  RDL CFNLA+LAK GWRIL  PN+LLAR+ + +Y+ H  F+ A    +VSWGW   
Sbjct: 781 GMGFRDLLCFNLAMLAKIGWRILRNPNSLLARLLQEKYYVHSDFMHAVCGRKVSWGWKGI 840

Query: 184 MAGR 188
           + GR
Sbjct: 841 LQGR 844

[Close]

BLAST of Lag0034883 vs. ExPASy TrEMBL
Match: A0A6J5X8F1 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS32035 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.6e-52
Identity = 93/184 (50.54%), Postives = 133/184 (72.28%), Query Frame = 0


Query: 4   KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEV 63
           K Q+A  LGV+H    G+YLGL+ +FGVSK+ +F+ ++ R+ +++ GWAEQ LS+A KEV
Sbjct: 683 KGQLAHILGVRHSGDFGKYLGLNADFGVSKRGVFEMVRKRIASKLMGWAEQYLSSAGKEV 742

Query: 64  LLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEG 123
           L+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+  KD+RGIH  +W++L + K  G
Sbjct: 743 LIKAVAMAMPNYSMSCFKLPVSLCKEIERDIANFWWKGHKDRRGIHWVSWQKLCQFKKAG 802

Query: 124 GLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSS 183
           G+  RDL CFNLA+L K GWRIL  PN+LLAR+ + +Y+    F+      +VSWGW   
Sbjct: 803 GMGFRDLLCFNLAMLTKIGWRILRNPNSLLARLLQEKYYVQSDFMHVVCGRKVSWGWKGI 862

Query: 184 MAGR 188
           + GR
Sbjct: 863 LQGR 866

[Close]

BLAST of Lag0034883 vs. ExPASy TrEMBL
Match: A0A6J5UV01 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS32434 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.6e-52
Identity = 93/184 (50.54%), Postives = 133/184 (72.28%), Query Frame = 0


Query: 4   KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEV 63
           K Q+A  LGV+H    G+YLGL+ +FGVSK+ +F+ ++ R+ +++ GWAEQ LS+A KEV
Sbjct: 621 KGQLAHILGVRHSGDFGKYLGLNADFGVSKRGVFEMVRKRIASKLMGWAEQYLSSAGKEV 680

Query: 64  LLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEG 123
           L+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+  KD+RGIH  +W++L + K  G
Sbjct: 681 LIKAVAMAMPNYSMSCFKLPVSLCKEIERDIANFWWKGHKDRRGIHWVSWQKLCQFKKAG 740

Query: 124 GLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSS 183
           G+  RDL CFNLA+L K GWRIL  PN+LLAR+ + +Y+    F+      +VSWGW   
Sbjct: 741 GMGFRDLLCFNLAMLTKIGWRILRNPNSLLARLLQEKYYVQSDFMHVVCGRKVSWGWKGI 800

Query: 184 MAGR 188
           + GR
Sbjct: 801 LQGR 804

[Close]

BLAST of Lag0034883 vs. ExPASy TrEMBL
Match: A0A6J5UE59 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23353 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 7.1e-46
Identity = 88/182 (48.35%), Postives = 123/182 (67.58%), Query Frame = 0


Query: 6   QMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLL 65
           QM   L VK     G+YLG+  +FG SK+ +F+ ++ +++ ++ GWAEQ LS A KEVL+
Sbjct: 645 QMEQILQVKGRKDFGKYLGIMADFGASKRKVFEEVRRKLDGKLHGWAEQFLSPAGKEVLI 704

Query: 66  KAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEGGL 125
           KAVA+A+P Y M+CFK+P+++CKEI   +A+FWW+   DK GIH  +W +L++ K  GGL
Sbjct: 705 KAVAMAMPCYTMSCFKLPVTLCKEIEAAMARFWWKSHSDKNGIHWASWTKLSQLKKAGGL 764

Query: 126 SMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMA 185
             RDL CFN+ALLAK GWRIL  P++LLA +   +YF    FL A  +   SWGW   + 
Sbjct: 765 GFRDLQCFNMALLAKIGWRILHNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGILQ 824

Query: 186 GR 188
           GR
Sbjct: 825 GR 826

[Close]

BLAST of Lag0034883 vs. ExPASy TrEMBL
Match: A0A6J5U034 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS15037 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.1e-45
Identity = 83/184 (45.11%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 4   KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEV 63
           + Q+   L V+     GRYLGL  +FG SK+ +F+ +++++  ++ GW+EQ LS A KEV
Sbjct: 156 RKQVGEILQVQQKDGFGRYLGLSADFGASKQRVFEEVRNKINAKLMGWSEQYLSQAGKEV 215

Query: 64  LLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEG 123
           L+KAVA+A+P YAM+CF++PI++CKEI  ++ ++WW+  K+ +GIH   W+ L+  K  G
Sbjct: 216 LIKAVAMAMPNYAMSCFQLPINLCKEIEREIIRYWWKGHKEHKGIHWVGWQRLSMLKEAG 275

Query: 124 GLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSS 183
           G+  RDL CFNLA+LAK GWRI+  P++LLA  Y+ +YF+   F+ A      SWGW   
Sbjct: 276 GIGFRDLRCFNLAMLAKIGWRIIKNPDSLLATTYRDKYFRSSDFMSAGGGRGTSWGWKGI 335

Query: 184 MAGR 188
           + GR
Sbjct: 336 LQGR 339

[Close]

BLAST of Lag0034883 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-27
Identity = 51/118 (43.22%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 70  LALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEGGLSMRD 129
           +ALP Y M CF +P ++CK+I + LA FWW+ +++ +G+H  AW  L+ +K+EGG+  +D
Sbjct: 1   MALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKD 60

Query: 130 LHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR 188
           +  FNLALL KQ WR+L++P +L+A+++K+RYF     L A +  R S+ W S  A +
Sbjct: 61  IEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQ 118

[Close]

BLAST of Lag0034883 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 119.0 bits (297), Expect = 4.3e-27
Identity = 55/119 (46.22%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 70  LALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHK-SEGGLSMR 129
           +ALP+YAM+CF++   +CK++ + + +FWW   ++KR I   AW++L K K  +GGL  R
Sbjct: 1   MALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 60

Query: 130 DLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR 188
           DL  FN ALLAKQ +RI+ QP+TLL+R+ ++RYF H   +E  V  R S+ W S + GR
Sbjct: 61  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGR 119

The following BLAST results are available for this feature:

BLAST of Lag0034883 vs. NCBI nr


Match Name	E-value	Identity	Description
CAB4273082.1	4.7e-52	51.09	unnamed protein product [Prunus armeniaca]	[more]
CAB4279811.1	1.4e-51	50.54	unnamed protein product [Prunus armeniaca]	[more]
CAB4310240.1	1.4e-51	50.54	unnamed protein product [Prunus armeniaca]	[more]
CAB4274760.1	1.5e-45	48.35	unnamed protein product [Prunus armeniaca]	[more]
KAG7586949.1	1.9e-45	49.47	Reverse transcriptase domain [Arabidopsis thaliana x Arabidopsis arenosa]	[more]

BLAST of Lag0034883 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	6.0e-26	46.22	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0C2F6	1.9e-16	32.50	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Lag0034883 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J5UAY2	2.3e-52	51.09	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5X8F1	6.6e-52	50.54	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5UV01	6.6e-52	50.54	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5UE59	7.1e-46	48.35	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5U034	2.1e-45	45.11	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]

BLAST of Lag0034883 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	2.5e-27	43.22	Ribonuclease H-like superfamily protein	[more]
ATMG00310.1	4.3e-27	46.22	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116:SF41	SUBFAMILY NOT NAMED	coord: 3..187
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 3..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0034883.1	Lag0034883.1	mRNA