Lag0034872 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0034872
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	cytochrome c-type biogenesis protein CcmE
Location	chr3: 11889406 .. 11890185 (+)
RNA-Seq Expression	Lag0034872
Synteny	Lag0034872

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACAAATCTCGCTCTCCGACTCAGATCACACCTCCTCTTGCGCTCCTCAGCTCGTTTCCGCTCCACTTTTCATCAAATTCAATCTTCCCCCATCCCCAAATCTTCCCTTCTTATCTCCTCTGCACTTGCCGATCTTCGTCGGCTTCCTGATCATACCGTCTTCAGTCTCTCTGGATTTCGCTTCCTCTCAACTGCACGCCGGAATCTGACCCGTTCGAAGCAGGTCGACATCGGAGCTCGGGCCAGGCAGCTCCAGACGCGGCGGCTCTGGACCTACGCTCTGACCTTCAGCTGCATCGCGGGCTTCATCGTCATTGTCCTCAGTAATTTTCAAGAGCATCTGATGTTCTACGTGACGCCCACCGATGCGCTCGAGAAATACTCTGCGAACACCTCGAAGAACAAGTTTCGTCTCGGTGGTCTGGTTCTTGAAGGCAGTGTGATGCATCCGGCATCGTCTTCTCAAATGGAGTTCGTGATAACGGATTTGATCACCGATATATTAGTTCGCCATCAGGGGTCGTTGCCGGATTTGTTTAGAGAAGGGCATTCGGTCGTGGTGGAAGGTTTTGTGAAGCCATTTACCGATGAGATAAGGAACGAGGTCTCTACAAAAAGTGTCTCGGGAAAAGCGAGGAGTGGGGAGTATTATTTTTCGGCTACAGAGGTTTTGGCAAAGCATGATGAGAAGTATATGCCGGCGGAGGTTGCGGCGGCAATCGAGAAGAACAAGAAGAAGATCGAGGAAGGAGAATTGGGGGTGAACCACGCTTGA

mRNA sequence

ATGGCAACAAATCTCGCTCTCCGACTCAGATCACACCTCCTCTTGCGCTCCTCAGCTCGTTTCCGCTCCACTTTTCATCAAATTCAATCTTCCCCCATCCCCAAATCTTCCCTTCTTATCTCCTCTGCACTTGCCGATCTTCGTCGGCTTCCTGATCATACCGTCTTCAGTCTCTCTGGATTTCGCTTCCTCTCAACTGCACGCCGGAATCTGACCCGTTCGAAGCAGGTCGACATCGGAGCTCGGGCCAGGCAGCTCCAGACGCGGCGGCTCTGGACCTACGCTCTGACCTTCAGCTGCATCGCGGGCTTCATCGTCATTGTCCTCAGTAATTTTCAAGAGCATCTGATGTTCTACGTGACGCCCACCGATGCGCTCGAGAAATACTCTGCGAACACCTCGAAGAACAAGTTTCGTCTCGGTGGTCTGGTTCTTGAAGGCAGTGTGATGCATCCGGCATCGTCTTCTCAAATGGAGTTCGTGATAACGGATTTGATCACCGATATATTAGTTCGCCATCAGGGGTCGTTGCCGGATTTGTTTAGAGAAGGGCATTCGGTCGTGGTGGAAGGTTTTGTGAAGCCATTTACCGATGAGATAAGGAACGAGGTCTCTACAAAAAGTGTCTCGGGAAAAGCGAGGAGTGGGGAGTATTATTTTTCGGCTACAGAGGTTTTGGCAAAGCATGATGAGAAGTATATGCCGGCGGAGGTTGCGGCGGCAATCGAGAAGAACAAGAAGAAGATCGAGGAAGGAGAATTGGGGGTGAACCACGCTTGA

Coding sequence (CDS)

ATGGCAACAAATCTCGCTCTCCGACTCAGATCACACCTCCTCTTGCGCTCCTCAGCTCGTTTCCGCTCCACTTTTCATCAAATTCAATCTTCCCCCATCCCCAAATCTTCCCTTCTTATCTCCTCTGCACTTGCCGATCTTCGTCGGCTTCCTGATCATACCGTCTTCAGTCTCTCTGGATTTCGCTTCCTCTCAACTGCACGCCGGAATCTGACCCGTTCGAAGCAGGTCGACATCGGAGCTCGGGCCAGGCAGCTCCAGACGCGGCGGCTCTGGACCTACGCTCTGACCTTCAGCTGCATCGCGGGCTTCATCGTCATTGTCCTCAGTAATTTTCAAGAGCATCTGATGTTCTACGTGACGCCCACCGATGCGCTCGAGAAATACTCTGCGAACACCTCGAAGAACAAGTTTCGTCTCGGTGGTCTGGTTCTTGAAGGCAGTGTGATGCATCCGGCATCGTCTTCTCAAATGGAGTTCGTGATAACGGATTTGATCACCGATATATTAGTTCGCCATCAGGGGTCGTTGCCGGATTTGTTTAGAGAAGGGCATTCGGTCGTGGTGGAAGGTTTTGTGAAGCCATTTACCGATGAGATAAGGAACGAGGTCTCTACAAAAAGTGTCTCGGGAAAAGCGAGGAGTGGGGAGTATTATTTTTCGGCTACAGAGGTTTTGGCAAAGCATGATGAGAAGTATATGCCGGCGGAGGTTGCGGCGGCAATCGAGAAGAACAAGAAGAAGATCGAGGAAGGAGAATTGGGGGTGAACCACGCTTGA

Protein sequence

MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSGFRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYVTPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDLFREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKKKIEEGELGVNHA

Homology

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BLAST of Lag0034872 vs. NCBI nr
Match: XP_038880283.1 (cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Benincasa hispida] >XP_038880284.1 cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Benincasa hispida] >XP_038880285.1 cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Benincasa hispida] >XP_038880286.1 cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Benincasa hispida])

HSP 1 Score: 455.7 bits (1171), Expect = 2.7e-124
Identity = 238/259 (91.89%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MATNLALRLRS LLL+SSARFRS FH IQ   +PKSS LISSAL+DLRR P+  +F+LSG
Sbjct: 1   MATNLALRLRSRLLLQSSARFRSNFHHIQPPHLPKSSPLISSALSDLRRFPNDPIFNLSG 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRF STARRNLTR KQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEKYSAN SKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKNKKKI EGELG+NHA
Sbjct: 241 AIEKNKKKIAEGELGLNHA 259

[Close]

BLAST of Lag0034872 vs. NCBI nr
Match: XP_022960773.1 (uncharacterized protein LOC111461474 [Cucurbita moschata] >KAG6590209.1 Cytochrome c-type biogenesis protein CcmE-like, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 449.5 bits (1155), Expect = 1.9e-122
Identity = 233/259 (89.96%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MA+NLA RLRSHLLLRSS RF  T + IQSS IPKS  LISSAL+DLRRLP  TVF+LSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSAIPKSPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRFLSTARRN TR KQVDIGARARQLQTRRLWTYALTFSCIAGFIVI+L+NF+EHL+FYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIILNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEKYSAN SKNKFRLGGLVLEGSVMHPASSSQMEFVITDL+TDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTD+IRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDDIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKNKKKIEEGELGVNHA
Sbjct: 241 AIEKNKKKIEEGELGVNHA 259

[Close]

BLAST of Lag0034872 vs. NCBI nr
Match: XP_023515457.1 (uncharacterized protein LOC111779609 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 448.0 bits (1151), Expect = 5.6e-122
Identity = 232/259 (89.58%), Postives = 243/259 (93.82%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MA+NLA RLRSHLLLRSS RF  T + IQSS IPKS  LI+SAL+DLRRLP  TVF+LSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSAIPKSPPLIASALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRFLSTARRN TR KQVDIGARARQLQTRRLWTYALTFSCIAGFIVI+L+NF+EHL+FYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIILNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEKYSAN SKNKFRLGGLVLEGSVMHPASSSQMEFVITDL+TDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKNKKKIEEGELG NHA
Sbjct: 241 AIEKNKKKIEEGELGANHA 259

[Close]

BLAST of Lag0034872 vs. NCBI nr
Match: XP_022988189.1 (uncharacterized protein LOC111485504 [Cucurbita maxima])

HSP 1 Score: 447.2 bits (1149), Expect = 9.6e-122
Identity = 233/259 (89.96%), Postives = 242/259 (93.44%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MA+NLA RLRSHLLLRSS RF  T + IQSS IPK   LISSAL+DLRRLP  TVF+LSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRFLSTARRN TR KQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVL+NF+EHL+FYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEKYSAN SKNKFRLGGLVLEGSVMHPASSSQMEFVITDL+TDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKNKKKIEEGELG NHA
Sbjct: 241 AIEKNKKKIEEGELGANHA 259

[Close]

BLAST of Lag0034872 vs. NCBI nr
Match: XP_004139025.1 (cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Cucumis sativus] >KGN66477.1 hypothetical protein Csa_007598 [Cucumis sativus])

HSP 1 Score: 445.3 bits (1144), Expect = 3.7e-121
Identity = 229/259 (88.42%), Postives = 246/259 (94.98%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MATNLALRLRS LLL+SS+RFR+TFHQ QS  IPKSS LI+SAL+DLRR+P++ +F+LSG
Sbjct: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRF STARRNLTR K VDIGARARQLQTRRLWTYALTFSCIAGF+VIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEK+SAN SKNKFRLGGLVLEGSV HPASSSQMEFVITDLITD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KPFTDEIRNE+STKSVSGKARS +YYFSA EVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKN+KKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

[Close]

BLAST of Lag0034872 vs. ExPASy Swiss-Prot
Match: Q96326 (Cytochrome c-type biogenesis protein CcmE homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CCME PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 8.0e-79
Identity = 164/250 (65.60%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MA  L  R RS  +LRS  R        +S P P    L ++A  D  RL      SL+ 
Sbjct: 1   MAARLLFR-RSSQILRSIQRNPQISSSFESPPCPIFHSL-TTASPDPSRLS-----SLTF 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
            R LS ARR  TR K++DIGA+ARQ+Q RRLWTYALTFSCIAGF+VIVL+ FQ+ L+FY+
Sbjct: 61  LRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYL 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TP+DA+EK++ N +KNKFRLGGLVLEGSV  PA+S +MEFVITDLITDILVR++GSLPDL
Sbjct: 121 TPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KP+TDE+R EVSTK +S KAR+ + +FSATEVLAKHDEKYMP EVAA
Sbjct: 181 FREGHSVVVEGFIKPYTDEVRKEVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEVAA 240

Query: 241 AIEKNKKKIE 251
           AIEKNKK IE
Sbjct: 241 AIEKNKKIIE 243

[Close]

BLAST of Lag0034872 vs. ExPASy Swiss-Prot
Match: Q2RYF4 (Cytochrome c-type biogenesis protein CcmE OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=ccmE PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.5e-19
Identity = 61/159 (38.36%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 89  RRLWTYALTFSCIAGFIVIVLSNFQEHLMFYVTPTDALEKYSANTSKNKFRLGGLVLEGS 148
           RRL+   L    +     + L+ FQ++L+F+ +PTD  EK        +FR+GGLV EGS
Sbjct: 6   RRLYFVVLGMLALFAAAGLTLTAFQDNLVFFYSPTDLQEK--GVDQGRRFRVGGLVEEGS 65

Query: 149 VMHPASSSQMEFVITDLITDILVRHQGSLPDLFREGHSVVVEGFVKPFTDEIRNEVSTKS 208
           V+    +  + F++TDL+  + VR+ G LPDLFREG  VV EG                 
Sbjct: 66  VVRDGET--VRFIVTDLMNTVTVRYTGMLPDLFREGQGVVAEG----------------- 125

Query: 209 VSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKK 248
               A  G   F A  VLAKHDE YMP EVA +++ + K
Sbjct: 126 ----AMDGAGTFVAASVLAKHDENYMPPEVAESLKASGK 139

[Close]

BLAST of Lag0034872 vs. ExPASy Swiss-Prot
Match: Q5P3K6 (Cytochrome c-type biogenesis protein CcmE OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=ccmE PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.6e-18
Identity = 57/161 (35.40%), Postives = 85/161 (52.80%), Query Frame = 0


Query: 87  QTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYVTPTDALEKYSANTSKNKFRLGGLVLE 146
           +++RL   A   + + G + +VL+ FQ++L+F+ TPT+  E          FR+GG+V  
Sbjct: 4   RSKRLLLVAGAVALLVGAVALVLNAFQQNLVFFHTPTEVAE--GKAPVGRAFRIGGMVET 63

Query: 147 GSVMHPASSSQMEFVITDLITDILVRHQGSLPDLFREGHSVVVEGFVKPFTDEIRNEVST 206
           GS+   A    ++F ITD    I V ++GSLPDLF EG   VV+G + P           
Sbjct: 64  GSIRRAADGVTVQFAITDTAKVIPVSYKGSLPDLFSEGKGAVVQGTLGP----------- 123

Query: 207 KSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKK 248
                     +  F A+EVLAKHDE YMP E   A+++ +K
Sbjct: 124 ----------DGQFQASEVLAKHDENYMPPEAQHAVDQAQK 141

[Close]

BLAST of Lag0034872 vs. ExPASy Swiss-Prot
Match: A1KCJ1 (Cytochrome c-type biogenesis protein CcmE OS=Azoarcus sp. (strain BH72) OX=418699 GN=ccmE PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-17
Identity = 62/161 (38.51%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 87  QTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYVTPTDALEKYSANTSKNKFRLGGLVLE 146
           + +RL       + +     +VLS FQ++L+F+ TP++  E   A   K  FR+GG+V  
Sbjct: 4   RNKRLMLVGGGIALLVAAAALVLSAFQQNLVFFHTPSEVAEG-KAPVGKT-FRVGGMVET 63

Query: 147 GSVMHPASSSQMEFVITDLITDILVRHQGSLPDLFREGHSVVVEGFVKPFTDEIRNEVST 206
           GS+   A    + FVITD    I V ++GSLPDLF+EG   VV+G              T
Sbjct: 64  GSIQRDADGVTVRFVITDTAKVIPVSYRGSLPDLFKEGKGAVVQG--------------T 123

Query: 207 KSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKK 248
               G+       F ATEVLAKHDE YMP E A A+E+  K
Sbjct: 124 LGADGQ-------FRATEVLAKHDENYMPPEAAHALEQAHK 141

[Close]

BLAST of Lag0034872 vs. ExPASy Swiss-Prot
Match: A1WWS3 (Cytochrome c-type biogenesis protein CcmE OS=Halorhodospira halophila (strain DSM 244 / SL1) OX=349124 GN=ccmE PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-17
Identity = 55/159 (34.59%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 96  LTFSCIAGFIV---IVLSNFQEHLMFYVTPTDALEKYSANTSKNKFRLGGLVLEGSVMHP 155
           L    +AG  V   +VL+ F++++ F++TP++ + K  ++  +  FR+GGLV +GSV   
Sbjct: 10  LVLGVVAGVSVATALVLNAFRDNMTFFITPSEVMAK--SDMPERHFRIGGLVEDGSVERD 69

Query: 156 ASSSQMEFVITDLITDILVRHQGSLPDLFREGHSVVVEGFVKPFTDEIRNEVSTKSVSGK 215
           + S+Q+ F +TD    + V  +G LPDLFREG  VVVEG            +++  V   
Sbjct: 70  SDSTQVRFRVTDTEASVPVDFEGILPDLFREGQGVVVEG-----------RITSNGV--- 129

Query: 216 ARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKKKIEE 252
                  F A  V+A+HDE YMPAE   A+++ +  ++E
Sbjct: 130 -------FKADNVMARHDEDYMPAEAQEALDRVEHSVDE 145

[Close]

BLAST of Lag0034872 vs. ExPASy TrEMBL
Match: A0A6J1H9Y7 (uncharacterized protein LOC111461474 OS=Cucurbita moschata OX=3662 GN=LOC111461474 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 9.4e-123
Identity = 233/259 (89.96%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MA+NLA RLRSHLLLRSS RF  T + IQSS IPKS  LISSAL+DLRRLP  TVF+LSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSAIPKSPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRFLSTARRN TR KQVDIGARARQLQTRRLWTYALTFSCIAGFIVI+L+NF+EHL+FYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIILNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEKYSAN SKNKFRLGGLVLEGSVMHPASSSQMEFVITDL+TDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTD+IRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDDIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKNKKKIEEGELGVNHA
Sbjct: 241 AIEKNKKKIEEGELGVNHA 259

[Close]

BLAST of Lag0034872 vs. ExPASy TrEMBL
Match: A0A6J1JKW0 (uncharacterized protein LOC111485504 OS=Cucurbita maxima OX=3661 GN=LOC111485504 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.7e-122
Identity = 233/259 (89.96%), Postives = 242/259 (93.44%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MA+NLA RLRSHLLLRSS RF  T + IQSS IPK   LISSAL+DLRRLP  TVF+LSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRFLSTARRN TR KQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVL+NF+EHL+FYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEKYSAN SKNKFRLGGLVLEGSVMHPASSSQMEFVITDL+TDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKNKKKIEEGELG NHA
Sbjct: 241 AIEKNKKKIEEGELGANHA 259

[Close]

BLAST of Lag0034872 vs. ExPASy TrEMBL
Match: A0A0A0M028 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613490 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.8e-121
Identity = 229/259 (88.42%), Postives = 246/259 (94.98%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MATNLALRLRS LLL+SS+RFR+TFHQ QS  IPKSS LI+SAL+DLRR+P++ +F+LSG
Sbjct: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRF STARRNLTR K VDIGARARQLQTRRLWTYALTFSCIAGF+VIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEK+SAN SKNKFRLGGLVLEGSV HPASSSQMEFVITDLITD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KPFTDEIRNE+STKSVSGKARS +YYFSA EVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKN+KKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

[Close]

BLAST of Lag0034872 vs. ExPASy TrEMBL
Match: A0A5A7V022 (Cytochrome c-type biogenesis protein CcmE OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold601G00020 PE=3 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120
Identity = 228/259 (88.03%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MATNLA RLRS LLL+SS+RFR+TFHQIQS  IPKSS LISSAL+DLRR+PD+ +F+LSG
Sbjct: 1   MATNLAFRLRSRLLLQSSSRFRTTFHQIQSPHIPKSSPLISSALSDLRRIPDNPIFNLSG 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRF STARRNLTR K VDIGARARQLQTRRLWTYALTFSCIAGF+VIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEK+SAN +KNKFRLGGLVLEGSV HPASSSQMEFVITDLITD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPAKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KPFTDEIRNE+STKSVS KARS +YYFSA EVLAKHDEKYMPAEV A
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSEKARSEKYYFSAIEVLAKHDEKYMPAEVGA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKN+KKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

[Close]

BLAST of Lag0034872 vs. ExPASy TrEMBL
Match: A0A6J1DIL0 (uncharacterized protein LOC111021418 OS=Momordica charantia OX=3673 GN=LOC111021418 PE=3 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120
Identity = 235/259 (90.73%), Postives = 241/259 (93.05%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MATNLALRLRS LLLRS+ RF+STF  I + PI KSS LIS  L+D RRLPD  VFS SG
Sbjct: 1   MATNLALRLRSQLLLRST-RFQSTFRHIPAPPISKSSSLISPPLSDFRRLPDVPVFSFSG 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRFLSTARRNLTR KQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV
Sbjct: 61  FRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEKYSAN SKNKFRLGGLVLEGSV+HPASS QMEFVITDLITDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSPQMEFVITDLITDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGFVKPFTDEIR EVSTKSVSGKARSG+YYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFVKPFTDEIRKEVSTKSVSGKARSGDYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKNKKKIEEGELGVNHA
Sbjct: 241 AIEKNKKKIEEGELGVNHA 258

[Close]

BLAST of Lag0034872 vs. TAIR 10
Match: AT3G51790.1 (transmembrane protein G1P-related 1 )

HSP 1 Score: 295.0 bits (754), Expect = 5.7e-80
Identity = 164/250 (65.60%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 1   MATNLALRLRSHLLLRSSARFRSTFHQIQSSPIPKSSLLISSALADLRRLPDHTVFSLSG 60
           MA  L  R RS  +LRS  R        +S P P    L ++A  D  RL      SL+ 
Sbjct: 1   MAARLLFR-RSSQILRSIQRNPQISSSFESPPCPIFHSL-TTASPDPSRLS-----SLTF 60

Query: 61  FRFLSTARRNLTRSKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
            R LS ARR  TR K++DIGA+ARQ+Q RRLWTYALTFSCIAGF+VIVL+ FQ+ L+FY+
Sbjct: 61  LRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYL 120

Query: 121 TPTDALEKYSANTSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TP+DA+EK++ N +KNKFRLGGLVLEGSV  PA+S +MEFVITDLITDILVR++GSLPDL
Sbjct: 121 TPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KP+TDE+R EVSTK +S KAR+ + +FSATEVLAKHDEKYMP EVAA
Sbjct: 181 FREGHSVVVEGFIKPYTDEVRKEVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEVAA 240

Query: 241 AIEKNKKKIE 251
           AIEKNKK IE
Sbjct: 241 AIEKNKKIIE 243

The following BLAST results are available for this feature:

BLAST of Lag0034872 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880283.1	2.7e-124	91.89	cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Benincasa hisp...	[more]
XP_022960773.1	1.9e-122	89.96	uncharacterized protein LOC111461474 [Cucurbita moschata] >KAG6590209.1 Cytochro...	[more]
XP_023515457.1	5.6e-122	89.58	uncharacterized protein LOC111779609 [Cucurbita pepo subsp. pepo]	[more]
XP_022988189.1	9.6e-122	89.96	uncharacterized protein LOC111485504 [Cucurbita maxima]	[more]
XP_004139025.1	3.7e-121	88.42	cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Cucumis sativu...	[more]

BLAST of Lag0034872 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96326	8.0e-79	65.60	Cytochrome c-type biogenesis protein CcmE homolog, mitochondrial OS=Arabidopsis ...	[more]
Q2RYF4	5.5e-19	38.36	Cytochrome c-type biogenesis protein CcmE OS=Rhodospirillum rubrum (strain ATCC ...	[more]
Q5P3K6	4.6e-18	35.40	Cytochrome c-type biogenesis protein CcmE OS=Aromatoleum aromaticum (strain EbN1...	[more]
A1KCJ1	1.0e-17	38.51	Cytochrome c-type biogenesis protein CcmE OS=Azoarcus sp. (strain BH72) OX=41869...	[more]
A1WWS3	1.0e-17	34.59	Cytochrome c-type biogenesis protein CcmE OS=Halorhodospira halophila (strain DS...	[more]

BLAST of Lag0034872 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9Y7	9.4e-123	89.96	uncharacterized protein LOC111461474 OS=Cucurbita moschata OX=3662 GN=LOC1114614...	[more]
A0A6J1JKW0	4.7e-122	89.96	uncharacterized protein LOC111485504 OS=Cucurbita maxima OX=3661 GN=LOC111485504...	[more]
A0A0A0M028	1.8e-121	88.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613490 PE=3 SV=1	[more]
A0A5A7V022	1.1e-120	88.03	Cytochrome c-type biogenesis protein CcmE OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1DIL0	1.1e-120	90.73	uncharacterized protein LOC111021418 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Lag0034872 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51790.1	5.7e-80	65.60	transmembrane protein G1P-related 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004329	CcmE/CycJ protein	PFAM	PF03100	CcmE	coord: 87..235 e-value: 2.9E-43 score: 146.9
IPR004329	CcmE/CycJ protein	PANTHER	PTHR34128	CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL	coord: 1..253
IPR004329	CcmE/CycJ protein	HAMAP	MF_01959	CcmE	coord: 84..246 score: 24.573397
None	No IPR available	GENE3D	2.40.50.140		coord: 112..242 e-value: 1.8E-29 score: 104.1
IPR036127	CcmE-like superfamily	SUPERFAMILY	82093	Heme chaperone CcmE	coord: 112..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0034872.1	Lag0034872.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0017003	protein-heme linkage
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0020037	heme binding