Lag0034724 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0034724
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protochlorophyllide-dependent translocon component 52, chloroplastic
Location	chr3: 10195465 .. 10197856 (-)
RNA-Seq Expression	Lag0034724
Synteny	Lag0034724

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTTCTGAAACTCTCTTCTGCTCCACTGCACTTCACTTCCAAACTGAACAAATCCCAATTTCCGAAGCCATGTATGCAGATTACTCATCTATTGCCGTCGTCGTCTTCTTCATCGATCAACAGACACAGTCGAAGATTCAAGCTCTTTGCGAGCATATCATCCTCCATTTCGACGGAAGAATCTGCGAATTCGTTCGAGGTTGAGGCCGAGAGTGAACGGCGAGAGGAGAGATTTGATTGGTATGCGCAGTGGTATCCGATTATGCCGATTTGTGACCTCGACAAGAGAGTGCCGCATGGGAAAACGGTGATGGGGATCGATGTGGTGGTGTGGTGGGATAAGAATGAGAGTGCCTGGAAGGTGTTTGAGGACTTGTGTCCTCATAGATTGGCTCCGTTGTCTGAAGGTAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGTTGGTGTTTTAATGGCTCCGGCGATTGTAAGTTCATCCCTCAGGCCCCCTCCGACGGCCCTCCGGTAATAATTCTACTGTCTTCTTCATGTGAATTGTGAACTTACGTTTATGCCTTTGTTGTGTATTGCTCTGCTTAAATTAGAGACTGAACTTTATGGTTGTATCTATTTAATCTTGAACTTAGTTTTGATTACATCTTGGAATTTGGATTGTGATTCTGTTTTGTCTCTAATGGTGACTTGACATGATTATTGGACAAGCATTAGTTGGTTTGACATGATTTAGTAAATAAACAAGAATGTCAATATAACAAATAACAAATTAACTTTAGTTGCCAGATTTGATACGATGTAATAAGCAAAAGAGTTTTCGTAAGCTGCTTGCTGCCACTTTATTTTGTTCAGTTGTCGACTGCCTTTTGCTACATGGAGCTCTGGATGTTGGTTCAATAGATATCTCATGCCATTATTTAAATTTAGTTAACAGTGTTAATGATAGAGATTACGCAGAATTAAACATTTCAAAGTTTAGAAAACTTTTTAAAGTTAGACACAACACTAAATTTATAATTTACTCATTACTTACTGCTTTTGAGCGAACTCAAATCAACACTGGTGAATCTTGTCATCTCATCGTTTTTTGTTCTGTGATAATATGGTTGGGTACCACTTTGGAGAAACCGTGCTTACTAAGAATCATGATTTATTTGGATGACAAATCAGAAGAATTTTTCTCAATGGATACATTTCTTATTGGATAATCAAACGCAATTTTTCTTGAATGCCGAAAGTTGTATGCATAATGTTCTTAGACTAGCTGTGAGTTAGGACTAAATTGATAAGCTTTTGACGTATTTTCATTGGTAATCTCATCCTTTTTCTCAAGATTCTTCCTGGTGTGGCATTTTCTTGGTTAATATTTTCCATTACTTCTCTGTGACGAACTTATGGGGAAAACTTTTGTAAAACTGACTAAATGATTTAACTTATTCAGAATTGAATTTTACTTTCTATTTCTGTCATTAGTGTGTGTTATTCTATTGGTGAACATTGTTCAGAATCTGATGACATAACGATTGAAAGTGCCATTGTATTCAGAAGTTACCAAGACAGTCGTACTCTAAGATAATTAAAAGATTAAGTATTGCGGTCATATTAGCCAAACTTTAAATATTTGAACAAGATATAATTTCTTCCGGTGATATATTACAGGTTCACACATCCAAGAGGGCATGTGTTGCTGTTTATCCTAGCATCGTGCAGAATGACATGTTATGGTTTTGGCCAAATAGTGATCCACGGTACAAGGATATTTTAGTGAAGAAAAAATCCCCTTACGTCCCCGAATTGGACGATCCGTCTTATACCAAGTTGATCAGTAACAGAGATCTTCCATATGGGTATGGAGAGACAAATTGTCACTTTTTAGCTGTTTGCATTCTATTTAATATTGGTCTGCGTCAGTCTAGTTGTAGATCTGAGTGACATAACAAAACTGTGCTGCTCTTTTTCTTTCTTTCTTTCTTTTTTCCCCTTTTCAATCCCCACTGATAGAAGATTGATTGTAAGATGAGGAAATCTTATTTAACAGAAAGATCATGACCTTATCCTTCCAAGAATGGTGAAGGAGGGTTAGCTACTTACCTACTTCATGATTAAATACAGCTAGGTGAATCTCATTCTAAAAGACTGATTACTAGCTAAGTCATAGTAGAACCAAAGAGGGTGAATTGTGCAGGTTAACAATAACATTGATGATAGAGAATATTCTTATGCAAAAAAAAAAGACTATAGAGAATACCTCTCTTTTTACTCAATTACTCTGTCTTTTTGCACTTTCAGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCACATGTCCCATATGCCCATTATGGGATAATGGGAATGCAACAGCCCAAGAACAGATGA

mRNA sequence

ATGGACGTTCTGAAACTCTCTTCTGCTCCACTGCACTTCACTTCCAAACTGAACAAATCCCAATTTCCGAAGCCATGTATGCAGATTACTCATCTATTGCCGTCGTCGTCTTCTTCATCGATCAACAGACACAGTCGAAGATTCAAGCTCTTTGCGAGCATATCATCCTCCATTTCGACGGAAGAATCTGCGAATTCGTTCGAGGTTGAGGCCGAGAGTGAACGGCGAGAGGAGAGATTTGATTGGTATGCGCAGTGGTATCCGATTATGCCGATTTGTGACCTCGACAAGAGAGTGCCGCATGGGAAAACGGTGATGGGGATCGATGTGGTGGTGTGGTGGGATAAGAATGAGAGTGCCTGGAAGGTGTTTGAGGACTTGTGTCCTCATAGATTGGCTCCGTTGTCTGAAGGTAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGTTGGTGTTTTAATGGCTCCGGCGATTGTAAGTTCATCCCTCAGGCCCCCTCCGACGGCCCTCCGGTTCACACATCCAAGAGGGCATGTGTTGCTGTTTATCCTAGCATCGTGCAGAATGACATGTTATGGTTTTGGCCAAATAGTGATCCACGGTACAAGGATATTTTAGTGAAGAAAAAATCCCCTTACGTCCCCGAATTGGACGATCCGTCTTATACCAAGTTGATCAGTAACAGAGATCTTCCATATGGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCACATGTCCCATATGCCCATTATGGGATAATGGGAATGCAACAGCCCAAGAACAGATGA

Coding sequence (CDS)

ATGGACGTTCTGAAACTCTCTTCTGCTCCACTGCACTTCACTTCCAAACTGAACAAATCCCAATTTCCGAAGCCATGTATGCAGATTACTCATCTATTGCCGTCGTCGTCTTCTTCATCGATCAACAGACACAGTCGAAGATTCAAGCTCTTTGCGAGCATATCATCCTCCATTTCGACGGAAGAATCTGCGAATTCGTTCGAGGTTGAGGCCGAGAGTGAACGGCGAGAGGAGAGATTTGATTGGTATGCGCAGTGGTATCCGATTATGCCGATTTGTGACCTCGACAAGAGAGTGCCGCATGGGAAAACGGTGATGGGGATCGATGTGGTGGTGTGGTGGGATAAGAATGAGAGTGCCTGGAAGGTGTTTGAGGACTTGTGTCCTCATAGATTGGCTCCGTTGTCTGAAGGTAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGTTGGTGTTTTAATGGCTCCGGCGATTGTAAGTTCATCCCTCAGGCCCCCTCCGACGGCCCTCCGGTTCACACATCCAAGAGGGCATGTGTTGCTGTTTATCCTAGCATCGTGCAGAATGACATGTTATGGTTTTGGCCAAATAGTGATCCACGGTACAAGGATATTTTAGTGAAGAAAAAATCCCCTTACGTCCCCGAATTGGACGATCCGTCTTATACCAAGTTGATCAGTAACAGAGATCTTCCATATGGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCACATGTCCCATATGCCCATTATGGGATAATGGGAATGCAACAGCCCAAGAACAGATGA

Protein sequence

MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSISTEESANSFEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTSKRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMGMQQPKNR

Homology

[Close]

BLAST of Lag0034724 vs. NCBI nr
Match: XP_038879674.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 515.8 bits (1327), Expect = 2.3e-142
Identity = 240/266 (90.23%), Postives = 250/266 (93.98%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSIST 60
           MDVLKLSS+P HFT+ LNK QFP  C+QI  L  SSSSSSIN+HSRRFKL A  SS+IST
Sbjct: 1   MDVLKLSSSPFHFTAILNKPQFPNQCLQIP-LFSSSSSSSINKHSRRFKLCAITSSAIST 60

Query: 61  EESANSFEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA 120
           EESAN FEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA
Sbjct: 61  EESANPFEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA 120

Query: 121 WKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTSKRA 180
           WKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHTSKRA
Sbjct: 121 WKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRA 180

Query: 181 CVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGYEVL 240
           CVAVYPSIVQN+MLWFWPNSDP+YKDILVKKK PY+PELDDPS+TKLISNRDLPYGYEVL
Sbjct: 181 CVAVYPSIVQNEMLWFWPNSDPQYKDILVKKKPPYIPELDDPSFTKLISNRDLPYGYEVL 240

Query: 241 TENLMDPAHVPYAHYGIMGMQQPKNR 267
           TENLMDPAHVPYAHYGIMG QQPKNR
Sbjct: 241 TENLMDPAHVPYAHYGIMGRQQPKNR 265

[Close]

BLAST of Lag0034724 vs. NCBI nr
Match: XP_022933573.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita moschata])

HSP 1 Score: 503.8 bits (1296), Expect = 8.9e-139
Identity = 238/269 (88.48%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSIST 60
           MDVLK SS PLHFT+KL KS+F K C+Q+ +LLPS  SSSI+RHSRRFKL AS+SS+IST
Sbjct: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQV-NLLPSLPSSSISRHSRRFKLRASVSSTIST 60

Query: 61  E--ESANSFEVEAESERRE-ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120
           E  E A+ FEVEAE+ERRE ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN
Sbjct: 61  EEFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120

Query: 121 ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTS 180
           ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHTS
Sbjct: 121 ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTS 180

Query: 181 KRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGY 240
           KRACVAVYPSIVQND+LWFWPNSDP+YKDILVKKK PY+PELDDPSYTKLISNRDLPYGY
Sbjct: 181 KRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGY 240

Query: 241 EVLTENLMDPAHVPYAHYGIMGMQQPKNR 267
           EVLTENLMDPAHVPYAHYGIMG QQP NR
Sbjct: 241 EVLTENLMDPAHVPYAHYGIMGRQQPNNR 268

[Close]

BLAST of Lag0034724 vs. NCBI nr
Match: KAG6588133.1 (Protochlorophyllide-dependent translocon component 52, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 503.8 bits (1296), Expect = 8.9e-139
Identity = 238/269 (88.48%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSIST 60
           MDVLK SS PLHFT+KL KS+F K C+Q+ +LLPS  SSSI+RHSRRFKL AS+SS+IST
Sbjct: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQV-NLLPSLPSSSISRHSRRFKLRASVSSTIST 60

Query: 61  E--ESANSFEVEAESERRE-ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120
           E  E A+ FEVEAE+ERRE ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN
Sbjct: 61  EEFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120

Query: 121 ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTS 180
           ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHTS
Sbjct: 121 ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTS 180

Query: 181 KRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGY 240
           KRACVAVYPSIVQND+LWFWPNSDP+YKDILVKKK PY+PELDDPSYTKLISNRDLPYGY
Sbjct: 181 KRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGY 240

Query: 241 EVLTENLMDPAHVPYAHYGIMGMQQPKNR 267
           EVLTENLMDPAHVPYAHYGIMG QQP NR
Sbjct: 241 EVLTENLMDPAHVPYAHYGIMGRQQPNNR 268

[Close]

BLAST of Lag0034724 vs. NCBI nr
Match: XP_008451029.1 (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 502.3 bits (1292), Expect = 2.6e-138
Identity = 231/266 (86.84%), Postives = 247/266 (92.86%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSIST 60
           MD+LKLSS+PLHFT K +K QFP  C++I  L PSSSSSSINR + RFKL A  SS+IST
Sbjct: 1   MDLLKLSSSPLHFTPKFDKPQFPNQCLRIP-LFPSSSSSSINRRNPRFKLCAITSSAIST 60

Query: 61  EESANSFEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA 120
           +ESAN F+VEAESE  EERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA
Sbjct: 61  QESANPFQVEAESESGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA 120

Query: 121 WKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTSKRA 180
           WKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHTSKRA
Sbjct: 121 WKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRA 180

Query: 181 CVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGYEVL 240
           CVAVYPSIVQND+LWFWPNSDP+YKDI+VKKK PY+PELDDPS+TKLISNRDLPYGYE+L
Sbjct: 181 CVAVYPSIVQNDVLWFWPNSDPQYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYGYEIL 240

Query: 241 TENLMDPAHVPYAHYGIMGMQQPKNR 267
           TENLMDPAHVPYAHYGIMG QQPKNR
Sbjct: 241 TENLMDPAHVPYAHYGIMGRQQPKNR 265

[Close]

BLAST of Lag0034724 vs. NCBI nr
Match: XP_023531366.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.9 bits (1291), Expect = 3.4e-138
Identity = 237/269 (88.10%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSIST 60
           MDVLK SS PLHFT+KLNKS+F K C+Q+ +LLPS  SSSI+R+SRRFKL AS+SS+IST
Sbjct: 1   MDVLKFSSVPLHFTAKLNKSRFLKQCLQV-NLLPSLPSSSISRYSRRFKLRASVSSTIST 60

Query: 61  E--ESANSFEVEAESERR-EERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120
           E  E A+ FEVEAESERR +ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN
Sbjct: 61  EEFEFASPFEVEAESERRVDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120

Query: 121 ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTS 180
           ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHTS
Sbjct: 121 ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTS 180

Query: 181 KRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGY 240
           KRACVAVYPSIVQND+LWFWPNSDP+YKDILVKK  PY+PELDDPSYTKLISNRDLPYGY
Sbjct: 181 KRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKNPPYIPELDDPSYTKLISNRDLPYGY 240

Query: 241 EVLTENLMDPAHVPYAHYGIMGMQQPKNR 267
           EVLTENLMDPAHVPYAHYGIMG QQP NR
Sbjct: 241 EVLTENLMDPAHVPYAHYGIMGRQQPNNR 268

[Close]

BLAST of Lag0034724 vs. ExPASy Swiss-Prot
Match: Q8W496 (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 5.9e-101
Identity = 163/235 (69.36%), Postives = 189/235 (80.43%), Query Frame = 0


Query: 33  LPSSSSSSINRHSRRFKLFASISSSISTEESANS-FEVEAESERREERFDWYAQWYPIMP 92
           LP S +S I R S RF    S   S S   S NS  E EA  E   ++FDWYA WYP+MP
Sbjct: 31  LPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPVMP 90

Query: 93  ICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYH 152
           ICDLDK+VPHGK VMGID+VVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCVYH
Sbjct: 91  ICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCVYH 150

Query: 153 GWCFNGSGDCKFIPQAPSDGPPVHTSKRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKK 212
           GWCFNGSGDCK IPQAP DGPPVHT K+ACVAVYPS VQ++++WFWPNSDP+YK+I+   
Sbjct: 151 GWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETN 210

Query: 213 KSPYVPELDDPSYTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMGMQQPKNR 267
           K PY+PEL+DPS+TKL+ NRD+PYGY+VL ENLMDPAHVPYAHYG+M   +PK +
Sbjct: 211 KPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGK 265

[Close]

BLAST of Lag0034724 vs. ExPASy Swiss-Prot
Match: Q9FYC2 (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.9e-47
Identity = 105/268 (39.18%), Postives = 146/268 (54.48%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPK-PCMQITHLLP-----SSSSSSINRHSRRFKLFASI 60
           M V+ LSS     ++ + KSQ  K P +  T   P     S S S +  +  R     S+
Sbjct: 1   MSVVLLSST----SATITKSQSKKIPFLSPTTKFPLKVSISPSRSKLFHNPLRVAAPPSV 60

Query: 61  SSSISTEESANSFEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWW 120
            +S STEE     E   + E     F W   WYP+  + DLD  VP    ++G D+V+W+
Sbjct: 61  PTSDSTEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWF 120

Query: 121 DKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPV 180
           D+N+  W  F+DLCPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA + GP  
Sbjct: 121 DRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEA 180

Query: 181 HT--SKRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVP-ELDDPSYTKLISNR 240
               S RAC   +P++V   +L+ WP  D    D     + P +P + D P ++ +   R
Sbjct: 181 RAVKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQR 240

Query: 241 DLPYGYEVLTENLMDPAHVPYAHYGIMG 260
           DL YGY+ L EN+ DP+H+ +AH+ + G
Sbjct: 241 DLFYGYDTLMENVSDPSHIDFAHHKVTG 262

[Close]

BLAST of Lag0034724 vs. ExPASy Swiss-Prot
Match: Q0DV66 (Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAO PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.3e-44
Identity = 95/252 (37.70%), Postives = 137/252 (54.37%), Query Frame = 0


Query: 14  TSKLNKSQFPKPCMQITHLLPSSSSSS---INRHSRRFKLFASISSSISTEESANSFEVE 73
           T+ L  S  P P  +    LP+ S+S    + R     +L  +   S+  E      E E
Sbjct: 7   TASLLLSPRPLPASRRVPSLPALSASGRLRLRRARADTRLRVAAPPSVPGEADQAPGETE 66

Query: 74  AESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPH 133
             +   +E+F W   WYP+  + DLD  VP    ++  D+V+W D     W   +D CPH
Sbjct: 67  PSTSSADEKFVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCPH 126

Query: 134 RLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHT--SKRACVAVYPSI 193
           RLAPLSEGRID+ G LQC YHGW F+GSG C  IPQA  +GP      S +AC   +P++
Sbjct: 127 RLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPTL 186

Query: 194 VQNDMLWFWPNSDPRYKDILVKKKSPYVP-ELDDPSYTKLISNRDLPYGYEVLTENLMDP 253
           V   +L+ WP+ +   K      K P +P E +DP+++ +   RDL YGY+ L EN+ DP
Sbjct: 187 VSQGLLFVWPDENGWEK--ATATKPPMLPKEFEDPAFSTVTIQRDLYYGYDTLMENVSDP 246

Query: 254 AHVPYAHYGIMG 260
           +H+ +AH+ + G
Sbjct: 247 SHIEFAHHKVTG 256

[Close]

BLAST of Lag0034724 vs. ExPASy Swiss-Prot
Match: O49931 (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.4e-32
Identity = 76/193 (39.38%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 66  SFEVEAESERREERFDWYAQWYPIMPICDLDKRVPH----GKTVMGIDVVVWWDKNESAW 125
           S E E + ER    +DW  +WYP+     L K VPH    G  V   ++V++ D N+  +
Sbjct: 83  SSEQERKGEREVADYDWTEEWYPLY----LTKNVPHDAPLGLKVYDKNIVLFRDGNDQ-F 142

Query: 126 KVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTSKRAC 185
           + +ED CPHRLA LSEG++   GRL+C+YHGW F G G C  IPQ P+D       K AC
Sbjct: 143 QCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPKSAC 202

Query: 186 VAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGYEVLT 245
           V  Y       +LW W +     K      K P+      P +  + +  +LPY + +L 
Sbjct: 203 VKTYEVRDSQGVLWVWMSR----KTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILL 262

Query: 246 ENLMDPAHVPYAH 255
           ENLMDPAHVP +H
Sbjct: 263 ENLMDPAHVPISH 262

[Close]

BLAST of Lag0034724 vs. ExPASy Swiss-Prot
Match: Q9SK50 (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-30
Identity = 71/195 (36.41%), Postives = 102/195 (52.31%), Query Frame = 0


Query: 62  ESANSFEVEAESERREE--RFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNES 121
           E      +  E E+R E   +DW  +WYP+    ++ +  P G TV    +V++ D  E 
Sbjct: 62  EGGGDVLLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEG 121

Query: 122 AWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTSKR 181
             + +ED CPHRLA LSEG++   GRL+C+YHGW F G G C  IPQ P+        K 
Sbjct: 122 TLRCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAS---AKIPKA 181

Query: 182 ACVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGYEV 241
           ACV  Y       ++W W ++    K     +K P+      P +  + +  +LPY + +
Sbjct: 182 ACVKTYEVKDSQGVVWVWMST----KTPPNPEKLPWFENFARPGFFDISTTHELPYDHSI 241

Query: 242 LTENLMDPAHVPYAH 255
           L ENLMDPAHVP +H
Sbjct: 242 LLENLMDPAHVPISH 247

[Close]

BLAST of Lag0034724 vs. ExPASy TrEMBL
Match: A0A6J1F557 (protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111440957 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.3e-139
Identity = 238/269 (88.48%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSIST 60
           MDVLK SS PLHFT+KL KS+F K C+Q+ +LLPS  SSSI+RHSRRFKL AS+SS+IST
Sbjct: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQV-NLLPSLPSSSISRHSRRFKLRASVSSTIST 60

Query: 61  E--ESANSFEVEAESERRE-ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120
           E  E A+ FEVEAE+ERRE ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN
Sbjct: 61  EEFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120

Query: 121 ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTS 180
           ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHTS
Sbjct: 121 ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTS 180

Query: 181 KRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGY 240
           KRACVAVYPSIVQND+LWFWPNSDP+YKDILVKKK PY+PELDDPSYTKLISNRDLPYGY
Sbjct: 181 KRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGY 240

Query: 241 EVLTENLMDPAHVPYAHYGIMGMQQPKNR 267
           EVLTENLMDPAHVPYAHYGIMG QQP NR
Sbjct: 241 EVLTENLMDPAHVPYAHYGIMGRQQPNNR 268

[Close]

BLAST of Lag0034724 vs. ExPASy TrEMBL
Match: A0A1S3BQM5 (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492435 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 231/266 (86.84%), Postives = 247/266 (92.86%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSIST 60
           MD+LKLSS+PLHFT K +K QFP  C++I  L PSSSSSSINR + RFKL A  SS+IST
Sbjct: 1   MDLLKLSSSPLHFTPKFDKPQFPNQCLRIP-LFPSSSSSSINRRNPRFKLCAITSSAIST 60

Query: 61  EESANSFEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA 120
           +ESAN F+VEAESE  EERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA
Sbjct: 61  QESANPFQVEAESESGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA 120

Query: 121 WKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTSKRA 180
           WKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHTSKRA
Sbjct: 121 WKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRA 180

Query: 181 CVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGYEVL 240
           CVAVYPSIVQND+LWFWPNSDP+YKDI+VKKK PY+PELDDPS+TKLISNRDLPYGYE+L
Sbjct: 181 CVAVYPSIVQNDVLWFWPNSDPQYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYGYEIL 240

Query: 241 TENLMDPAHVPYAHYGIMGMQQPKNR 267
           TENLMDPAHVPYAHYGIMG QQPKNR
Sbjct: 241 TENLMDPAHVPYAHYGIMGRQQPKNR 265

[Close]

BLAST of Lag0034724 vs. ExPASy TrEMBL
Match: A0A6J1HR92 (protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466721 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136
Identity = 233/269 (86.62%), Postives = 248/269 (92.19%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSIST 60
           MDVLK SS PLHFT+KLNKS+F K C+Q+ +LLPS  SS I+RHSRRF L AS+SS+IST
Sbjct: 1   MDVLKFSSVPLHFTAKLNKSRFLKQCLQV-NLLPSLPSSLISRHSRRFNLRASVSSTIST 60

Query: 61  E--ESANSFEVEAESERRE-ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120
           E  E A+ FE EAE+ERRE ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN
Sbjct: 61  EEFEYASPFEDEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120

Query: 121 ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTS 180
           ESAWKVFED CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHTS
Sbjct: 121 ESAWKVFEDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTS 180

Query: 181 KRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGY 240
           KRACVAVYPSIVQND+LWFWPNSDP+YKDILVKKK PY+PELDDPSYTKL SNRDLPYGY
Sbjct: 181 KRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLTSNRDLPYGY 240

Query: 241 EVLTENLMDPAHVPYAHYGIMGMQQPKNR 267
           E+LTENLMDPAHVPYAHYGIMGM+QP NR
Sbjct: 241 EILTENLMDPAHVPYAHYGIMGMRQPNNR 268

[Close]

BLAST of Lag0034724 vs. ExPASy TrEMBL
Match: A0A5D3CEJ7 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00840 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135
Identity = 232/287 (80.84%), Postives = 248/287 (86.41%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSIST 60
           MD+LKLSS+PLHFTSK +K QFP  C++I  L PSSSSSSINR + RFKL A  SS+IST
Sbjct: 1   MDLLKLSSSPLHFTSKFDKPQFPNQCLRIP-LFPSSSSSSINRRNPRFKLCAITSSAIST 60

Query: 61  EESANSFEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA 120
           +ESAN F+VEAESE  EERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA
Sbjct: 61  QESANPFQVEAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA 120

Query: 121 WKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTSKRA 180
           WKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHTSKRA
Sbjct: 121 WKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRA 180

Query: 181 CVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYG---- 240
           CVAVYPSIVQND+LWFWPNSDP+YKDI+VKKK PY+PELDDPS+TKLISNRDLPYG    
Sbjct: 181 CVAVYPSIVQNDVLWFWPNSDPQYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYGRSSA 240

Query: 241 -----------------YEVLTENLMDPAHVPYAHYGIMGMQQPKNR 267
                            YE+LTENLMDPAHVPYAHYGIMG QQPKNR
Sbjct: 241 RDDISVYSTTQSFCTFRYEILTENLMDPAHVPYAHYGIMGRQQPKNR 286

[Close]

BLAST of Lag0034724 vs. ExPASy TrEMBL
Match: A0A0A0LZA2 (Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600140 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.4e-135
Identity = 228/266 (85.71%), Postives = 244/266 (91.73%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPKPCMQITHLLPSSSSSSINRHSRRFKLFASISSSIST 60
           MDVLKLSS+PLHFTSK NK QFP  C+QI  L PSSSSSSINR +  F L A  SS+IST
Sbjct: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIP-LFPSSSSSSINRRNPIFNLCAITSSTIST 60

Query: 61  EESANSFEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA 120
           +ESAN F+V+AESE  EERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA
Sbjct: 61  QESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESA 120

Query: 121 WKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTSKRA 180
           WKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHTSKRA
Sbjct: 121 WKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRA 180

Query: 181 CVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGYEVL 240
           CVAV+PSIVQND+LWFWPNSDP+YKDI+ KKK PY+PELDDPS+TKLISNRDLPYGYE+L
Sbjct: 181 CVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEIL 240

Query: 241 TENLMDPAHVPYAHYGIMGMQQPKNR 267
           TENLMDPAHVPYAHYGIMG + PKNR
Sbjct: 241 TENLMDPAHVPYAHYGIMG-RLPKNR 264

[Close]

BLAST of Lag0034724 vs. TAIR 10
Match: AT4G25650.1 (ACD1-like )

HSP 1 Score: 368.6 bits (945), Expect = 4.2e-102
Identity = 163/235 (69.36%), Postives = 189/235 (80.43%), Query Frame = 0


Query: 33  LPSSSSSSINRHSRRFKLFASISSSISTEESANS-FEVEAESERREERFDWYAQWYPIMP 92
           LP S +S I R S RF    S   S S   S NS  E EA  E   ++FDWYA WYP+MP
Sbjct: 31  LPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPVMP 90

Query: 93  ICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYH 152
           ICDLDK+VPHGK VMGID+VVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCVYH
Sbjct: 91  ICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCVYH 150

Query: 153 GWCFNGSGDCKFIPQAPSDGPPVHTSKRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKK 212
           GWCFNGSGDCK IPQAP DGPPVHT K+ACVAVYPS VQ++++WFWPNSDP+YK+I+   
Sbjct: 151 GWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETN 210

Query: 213 KSPYVPELDDPSYTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMGMQQPKNR 267
           K PY+PEL+DPS+TKL+ NRD+PYGY+VL ENLMDPAHVPYAHYG+M   +PK +
Sbjct: 211 KPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKEK 265

[Close]

BLAST of Lag0034724 vs. TAIR 10
Match: AT4G25650.2 (ACD1-like )

HSP 1 Score: 368.6 bits (945), Expect = 4.2e-102
Identity = 163/235 (69.36%), Postives = 189/235 (80.43%), Query Frame = 0


Query: 33  LPSSSSSSINRHSRRFKLFASISSSISTEESANS-FEVEAESERREERFDWYAQWYPIMP 92
           LP S +S I R S RF    S   S S   S NS  E EA  E   ++FDWYA WYP+MP
Sbjct: 31  LPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPVMP 90

Query: 93  ICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYH 152
           ICDLDK+VPHGK VMGID+VVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCVYH
Sbjct: 91  ICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCVYH 150

Query: 153 GWCFNGSGDCKFIPQAPSDGPPVHTSKRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKK 212
           GWCFNGSGDCK IPQAP DGPPVHT K+ACVAVYPS VQ++++WFWPNSDP+YK+I+   
Sbjct: 151 GWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETN 210

Query: 213 KSPYVPELDDPSYTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMGMQQPKNR 267
           K PY+PEL+DPS+TKL+ NRD+PYGY+VL ENLMDPAHVPYAHYG+M   +PK +
Sbjct: 211 KPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGK 265

[Close]

BLAST of Lag0034724 vs. TAIR 10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 190.3 bits (482), Expect = 2.0e-48
Identity = 105/268 (39.18%), Postives = 146/268 (54.48%), Query Frame = 0


Query: 1   MDVLKLSSAPLHFTSKLNKSQFPK-PCMQITHLLP-----SSSSSSINRHSRRFKLFASI 60
           M V+ LSS     ++ + KSQ  K P +  T   P     S S S +  +  R     S+
Sbjct: 1   MSVVLLSST----SATITKSQSKKIPFLSPTTKFPLKVSISPSRSKLFHNPLRVAAPPSV 60

Query: 61  SSSISTEESANSFEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWW 120
            +S STEE     E   + E     F W   WYP+  + DLD  VP    ++G D+V+W+
Sbjct: 61  PTSDSTEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWF 120

Query: 121 DKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPV 180
           D+N+  W  F+DLCPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA + GP  
Sbjct: 121 DRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEA 180

Query: 181 HT--SKRACVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVP-ELDDPSYTKLISNR 240
               S RAC   +P++V   +L+ WP  D    D     + P +P + D P ++ +   R
Sbjct: 181 RAVKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQR 240

Query: 241 DLPYGYEVLTENLMDPAHVPYAHYGIMG 260
           DL YGY+ L EN+ DP+H+ +AH+ + G
Sbjct: 241 DLFYGYDTLMENVSDPSHIDFAHHKVTG 262

[Close]

BLAST of Lag0034724 vs. TAIR 10
Match: AT2G24820.1 (translocon at the inner envelope membrane of chloroplasts 55-II )

HSP 1 Score: 135.2 bits (339), Expect = 7.7e-32
Identity = 71/195 (36.41%), Postives = 102/195 (52.31%), Query Frame = 0


Query: 62  ESANSFEVEAESERREE--RFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNES 121
           E      +  E E+R E   +DW  +WYP+    ++ +  P G TV    +V++ D  E 
Sbjct: 62  EGGGDVLLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEG 121

Query: 122 AWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTSKR 181
             + +ED CPHRLA LSEG++   GRL+C+YHGW F G G C  IPQ P+        K 
Sbjct: 122 TLRCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAS---AKIPKA 181

Query: 182 ACVAVYPSIVQNDMLWFWPNSDPRYKDILVKKKSPYVPELDDPSYTKLISNRDLPYGYEV 241
           ACV  Y       ++W W ++    K     +K P+      P +  + +  +LPY + +
Sbjct: 182 ACVKTYEVKDSQGVVWVWMST----KTPPNPEKLPWFENFARPGFFDISTTHELPYDHSI 241

Query: 242 LTENLMDPAHVPYAH 255
           L ENLMDPAHVP +H
Sbjct: 242 LLENLMDPAHVPISH 247

[Close]

BLAST of Lag0034724 vs. TAIR 10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 88.6 bits (218), Expect = 8.3e-18
Identity = 52/183 (28.42%), Postives = 80/183 (43.72%), Query Frame = 0


Query: 86  WYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVF----------EDLCPHRLAPL 145
           WYP+    DL             D +V  +  E  W +F           + C HR  PL
Sbjct: 221 WYPVAFTADLKH-----------DTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPL 280

Query: 146 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHTSKRACVAVYPSIVQNDMLW 205
             G +++ GR+QC YHGW ++  G+CK +P             +  +   P + Q  M+W
Sbjct: 281 DLGTVNE-GRIQCPYHGWEYSTDGECKKMPST--------KLLKVKIKSLPCLEQEGMIW 340

Query: 206 FWPNSDPRYKDILVKKKSPYVPELDDPS----YTKLISNRDLPYGYEVLTENLMDPAHVP 255
            WP  +P          +P +P L  PS    + +L+   DLP  + +L +NL+D AH P
Sbjct: 341 IWPGDEP---------PAPILPSLQPPSGFLIHAELV--MDLPVEHGLLLDNLLDLAHAP 372

The following BLAST results are available for this feature:

BLAST of Lag0034724 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879674.1	2.3e-142	90.23	protochlorophyllide-dependent translocon component 52, chloroplastic-like [Benin...	[more]
XP_022933573.1	8.9e-139	88.48	protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ...	[more]
KAG6588133.1	8.9e-139	88.48	Protochlorophyllide-dependent translocon component 52, chloroplastic, partial [C...	[more]
XP_008451029.1	2.6e-138	86.84	PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-...	[more]
XP_023531366.1	3.4e-138	88.10	protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ...	[more]

BLAST of Lag0034724 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W496	5.9e-101	69.36	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop...	[more]
Q9FYC2	2.9e-47	39.18	Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P...	[more]
Q0DV66	1.3e-44	37.70	Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
O49931	4.4e-32	39.38	Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1	[more]
Q9SK50	1.1e-30	36.41	Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1	[more]

BLAST of Lag0034724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F557	4.3e-139	88.48	protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbit...	[more]
A0A1S3BQM5	1.3e-138	86.84	protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc...	[more]
A0A6J1HR92	1.5e-136	86.62	protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbit...	[more]
A0A5D3CEJ7	2.2e-135	80.84	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A0A0LZA2	6.4e-135	85.71	Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600140 PE=4...	[more]

BLAST of Lag0034724 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25650.1	4.2e-102	69.36	ACD1-like	[more]
AT4G25650.2	4.2e-102	69.36	ACD1-like	[more]
AT3G44880.1	2.0e-48	39.18	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]
AT2G24820.1	7.7e-32	36.41	translocon at the inner envelope membrane of chloroplasts 55-II	[more]
AT1G44446.1	8.3e-18	28.42	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 81..219 e-value: 1.9E-36 score: 126.6
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 69..202
None	No IPR available	GENE3D	3.90.380.10		coord: 221..265 e-value: 5.4E-6 score: 28.3
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 28..260
None	No IPR available	CDD	cd03480	Rieske_RO_Alpha_PaO	coord: 80..207 e-value: 1.00643E-83 score: 244.924
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 192..262
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 85..168 e-value: 2.5E-18 score: 65.8
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 86..196 score: 27.953999

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0034724.1	Lag0034724.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0046872	metal ion binding