Lag0034687 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0034687
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H
Locationchr3: 9798311 .. 9802261 (+)
RNA-Seq ExpressionLag0034687
SyntenyLag0034687
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAATGGGTTATATCTTTGCGTTGATATGGAGGATGTTCACGCTTTTGACTCCAATCGCCCGTCAAAGCTTCGATCTGCTCCTGCCGATTTCTTGAGTATGGTGAATATATTGGATCTAATTGTTGATTGTTGGTTGTTAGGGTTTATGAGGACTTTTTAATTTTTAATTTTTTTTTATTATTTCTCTATTTTGTTGTAGCAAAGGTTTGAATGAATCTGAAGACGAAGGTGGCTGCTTCTGCGATTCCTCGTTAAATACTCCGTATGGATTTCTAAATACCGGGTATGAATTTTTAAATACCCAGTATGAATTTTGAAACTTCTCCATAATTAGTTTTGTCAATTTTAGTTTTTTTAGATAAATTCTCACTAGCATAGTTATTTCATATGGAGTATGAAATTCGTTTATTCATAATTCTAACACATACATTATAATACTGTACCGATATATACCACTTACAAGCACGTATGAAATTCATTTATTCATAATTATAACACATACATTATAATTCTAAACCAATATATACCACTTACAAACGGTTATGAAATTCATTTATTCATAATTATAACACATACATGATAATTCTGAACCAATATATACTACTTACAAACGGGTATGAAATTCATTTTTTCATAAGTCGATTATATATACCACTTATAAACAGGTATATAAAATTCGTTCATATCCAAAAGAAAAAAAATACAAATATTGGTTGGAACAATTTATATATTATCGAATGAAAAATATAATAGAATCATATACATCCACACAACGAGAAAAACAAACTGTTACAATCTATTACGCAAATTGCTAAATAAAGGAGACATAATTTGACCGGAACGAAGAAAAAAAATTGTGAAAATTAACCATGACAAATTGAAAAGGAAAAAGAATTTTGAAAAAAAAAAACCCTTATTGTGTCGACAAGCTGAAAATGGTTTAGGAAACCTATAAATAAAAAATCTACAATAATAAATTGCAGATTTGATTTTTTACTATGTATAAAATTGTCTACGATTCAGCTTAATATTTTCCTTAAATTTTAGGGAAATCTGGAACGTAATTCAAGGAAAAGAACGAAAAATATATTTTATTCAATAAATTATATATTCTATTATATTATTAAATTTATTTTATTTCATTTATTCAATGAAAGGACATTTTGGTAACAAAATTAACTCGTATAAAAACCTACTAATAATAATTTTGATCATTAAGGACATTTGCCTTTATGGACATGTCCTCATGGTGTTTTGAATAATATGATATCACGCACGTTTTCTAATTTTTACACACCTGTTTAATTTAACAAAAAAGACATTTTTTATACCAATTTTAAAGTTCGAGAACTTTCTATTTTGTTCCACACTAGCTACCATTTCAATTTTCACTATTTATTTTAAAGAACAAGATATTTTTTAAAACCAACTTTAAAGTCCAATGATATTTTTTTAAAATAAATTTCGACGTTGATAAATTATTATGGCTTCACTTGATAACCATTTGGTTTTTGGTTTTCGGTTTTTGAAAATTATGCTTATAAAGCTACTTTTACCTCCAAGTTTTTATTTATATTTTTTTATTTACCTTCGTCCCATATTTTAAAAAAACCAGGTCAATTTTTGAAACTAGAAAAAAAAAAAAAAAAAAAAAACTTGCTTTTGTTTTTGGAATTTGACTTGGAATTCAAGAGTGTCCTCCACAAAGATGAAAACAAGAAAATTGAAGAAAAATAGGCATAATTTTAAAAAACGAAAAACCAAATAGTTATTAGACTGGTCTAAACTTTTTTATTTTTAAGGTTGGCTTAAAATTTACCCTAAATATAATGAGTTTTGTATAATTTAGGGAAAAATACATAGATAGCCCAAATTAGGCCCATATATTTCATAAATGTTCAAACTTACCATTTTTTACAAAAATGGCCTAATGACCCAAATATTTTTCATAAAAATCATGGCCCTTTTACGATTCAGCCCTTATACATTCCCACTAACGATTAAAAAATAAAAAAAACCAAAAAAGGAAATACAAATCGTTTCCTTCCATTTTCAATTTCAAACTGTCGGTGGGAGAGAGTGAACGGAAAAGGAAAGCAATCGGGGAGGCGAAAAAAACCACGATTTTGGCTTCAGTTCAACTCACAATTTTTGCTTCATTTTTCCGAAGACTTTGCGAAGAAGAAGGCACAGAAATTTCAGGAAGAAGATGGGCCGCTGTTTGGAGAAACCCTCTGGTATATTTCGAACTACGGAGGTATATTCTTTAGGGGTTTTTTCCTCTTGTTTACATTCAAATAATTTGGTATATTTCTTCGAAATACATAGTACATGCGTGACATTCCCATGGTTTTTTAGGGTTTTTTCACGTCCACTGTGCCTTAAGCGTCGACACTCTATTGTTTCGAAGTGTCCTTAGTTCTTCACTGTTGGAAAATGTCTAGGGTTTAATCTTCTTCAACAATGTTAAATACATTTCATTAAAGATTGTTGAAACTAAAAACATTCATGATTATAAGCTGTATTCCACATGCATTCTGTTTGAAGCTGTATCAGAGAAAAGTTTCATTATGATCCTCTGTTTTAGTCATAATCTGGTATATTTATTCGAAAGCCATATGACATTTACACTGTTATTAACGATATAAACCATATGACATATAAACTGTTACTTGGTATATATGAAATAGGGGATTGCAACATAATAACTCAATTCTAAACTACCCTGACTATTAAAAATAAAATAGTTTATTACATATATACAACAGAATATGACACATTGCCCATCGATATATTAACTATTGATATGGCTTTGTATCATCATTCATACAAGTTAATTACATAAAAACTGCCTAGTTTTTGCATGATACAATGCTGAAACTCAGTAAAAGTCATCCCATCATTCAATAACAGCTGTGATACTTTGTAGTCCACATAATTCTCACCATCATTCCAATGATCATCGTGCATCATTTGAACATTTACGCTACCTTAAAAATATATATAAGGAATAAACCACATAATATGTATCAGACACACATGTTACATATGAAACATAAGTATTCTGACATATGATATATATTTTGTTATGCTTTGCAATATATAATATTTAAAATATGATATGTACATAAATATATAAGATATAACATGTTCTATAAACCCGAACACAATATAATCAGAATAACAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATCAGTTCGTTTAAAGAATTGGCCCGAGCGTTTGTTACGCAATTCCTCGGGGCCCGGAGCCAACCGAAGCCTCAAATCAACTCGCTGACAGTAAAACAGGGGCGTCGAGAAAGTTTGAAGGATTATATTAATAGATTTTGTAACGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTGCCTTGACCGCTATGATTTCAGGTCTGCAGGATGAAAGACTGCTCAGCTCGATCAGCAAGATCAGTCCTCGGCCAATGGCCGAGGCCGACCAGAGACCAAGGAGCCACAGGGTTGTGGTGAACCAAAAAGCCAGATTCGAGAGGTATACACCACTAACAGCTTCGCTTGAACAGGTCTTGGCTGCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAAGTTGAGATTAGACCCTGACAGGAGGAATAGAAACAAATACTGCATGTTCCGCGGAGACCACGGTCACGCAATCCAGGAATGCATACAATTGAGGGATGAGATAGAAGCCCTAATCCGAGAAGGTTACCTCAAGGGGTTCGTGGGGAACGACAGAGCAGCGCATGGCGAGCAAAAGATGTCGAAGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGGAAGGTTCAAGCAACGGCCTCGAGAGTTGGCTGA

mRNA sequence

ATGGTAAATGGGTTATATCTTTGCGTTGATATGGAGGATGTTCACGCTTTTGACTCCAATCGCCCGTCAAAGCTTCGATCTGCTCCTGCCGATTTCTTGAGTATGGTGAATATATTGGATCTAATTGTTGATTGTTGCAAAGGTTTGAATGAATCTGAAGACGAAGGTGGCTGCTTCTGCGATTCCTCGTTAAATACTCCGTATGGATTTCTAAATACCGGACTTTGCGAAGAAGAAGGCACAGAAATTTCAGGAAGAAGATGGGCCGCTGTTTGGAGAAACCCTCTGGTATATTTCGAACTACGGAGTTCGTTTAAAGAATTGGCCCGAGCGTTTGTTACGCAATTCCTCGGGGCCCGGAGCCAACCGAAGCCTCAAATCAACTCGCTGACAGTAAAACAGGGGCGTCGAGAAAGTTTGAAGGATTATATTAATAGATTTTGTAACGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTGCCTTGACCGCTATGATTTCAGGTCTGCAGGATGAAAGACTGCTCAGCTCGATCAGCAAGATCAGTCCTCGGCCAATGGCCGAGGCCGACCAGAGACCAAGGAGCCACAGGGTTGTGGTGAACCAAAAAGCCAGATTCGAGAGGTATACACCACTAACAGCTTCGCTTGAACAGGTCTTGGCTGCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAAGTTGAGATTAGACCCTGACAGGAGGAATAGAAACAAATACTGCATGTTCCGCGGAGACCACGGTCACGCAATCCAGGAATGCATACAATTGAGGGATGAGATAGAAGCCCTAATCCGAGAAGGTTACCTCAAGGGGTTCGTGGGGAACGACAGAGCAGCGCATGGCGAGCAAAAGATGTCGAAGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGGAAGGTTCAAGCAACGGCCTCGAGAGTTGGCTGA

Coding sequence (CDS)

ATGGTAAATGGGTTATATCTTTGCGTTGATATGGAGGATGTTCACGCTTTTGACTCCAATCGCCCGTCAAAGCTTCGATCTGCTCCTGCCGATTTCTTGAGTATGGTGAATATATTGGATCTAATTGTTGATTGTTGCAAAGGTTTGAATGAATCTGAAGACGAAGGTGGCTGCTTCTGCGATTCCTCGTTAAATACTCCGTATGGATTTCTAAATACCGGACTTTGCGAAGAAGAAGGCACAGAAATTTCAGGAAGAAGATGGGCCGCTGTTTGGAGAAACCCTCTGGTATATTTCGAACTACGGAGTTCGTTTAAAGAATTGGCCCGAGCGTTTGTTACGCAATTCCTCGGGGCCCGGAGCCAACCGAAGCCTCAAATCAACTCGCTGACAGTAAAACAGGGGCGTCGAGAAAGTTTGAAGGATTATATTAATAGATTTTGTAACGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTGCCTTGACCGCTATGATTTCAGGTCTGCAGGATGAAAGACTGCTCAGCTCGATCAGCAAGATCAGTCCTCGGCCAATGGCCGAGGCCGACCAGAGACCAAGGAGCCACAGGGTTGTGGTGAACCAAAAAGCCAGATTCGAGAGGTATACACCACTAACAGCTTCGCTTGAACAGGTCTTGGCTGCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAAGTTGAGATTAGACCCTGACAGGAGGAATAGAAACAAATACTGCATGTTCCGCGGAGACCACGGTCACGCAATCCAGGAATGCATACAATTGAGGGATGAGATAGAAGCCCTAATCCGAGAAGGTTACCTCAAGGGGTTCGTGGGGAACGACAGAGCAGCGCATGGCGAGCAAAAGATGTCGAAGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGGAAGGTTCAAGCAACGGCCTCGAGAGTTGGCTGA

Protein sequence

MVNGLYLCVDMEDVHAFDSNRPSKLRSAPADFLSMVNILDLIVDCCKGLNESEDEGGCFCDSSLNTPYGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAEADQRPRSHRVVVNQKARFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDRAAHGEQKMSKECYFMALRNIDRKVQATASRVG
Homology
BLAST of Lag0034687 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 164.1 bits (414), Expect = 2.0e-36
Identity = 102/268 (38.06%), Postives = 140/268 (52.24%), Query Frame = 0

Query: 68  YGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQI 127
           YG      C    T ++G   A +W   L    + SSFK LARAFVTQF+G R + +P  
Sbjct: 221 YGVSEAVRCRVFSTTLNGS--ARIWFRQLKRGSI-SSFKSLARAFVTQFVGGRCRSRPVA 280

Query: 128 NSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPM 187
             LT+KQ   ESL+DY+ RF  E LQVEG  D V+L A +SG++DE L  S  K +P   
Sbjct: 281 YLLTIKQRTTESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTF 340

Query: 188 AEADQRPRSH------------------------------------RVVVNQK---ARFE 247
           +EA  R + +                                    R   +QK    +FE
Sbjct: 341 SEALSRAQRYMSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFE 400

Query: 248 RYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDE 296
           +YTP T  +EQVL  I+D  LLK PE+++    +R++ +YC+F  DHGHA Q+C  L++E
Sbjct: 401 KYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEE 460

BLAST of Lag0034687 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-31
Identity = 87/233 (37.34%), Postives = 125/233 (53.65%), Query Frame = 0

Query: 103 SSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVA 162
           SSFK LARAFVTQF+G R + +P    LT+KQ   ESL DY+ RF  E LQ+E   D V+
Sbjct: 37  SSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNKEKLQIESLTDVVS 96

Query: 163 LTAMISGLQDERLLSSISKISPRPMAE--------------------------------A 222
           L A +SG++DE L  S  K +P   +E                                +
Sbjct: 97  LLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKREPDGKRTDQKRERS 156

Query: 223 DQRPRSHRVVVNQKA-------RFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRR 282
             +P+  R     ++       +FE+YTP T  LEQVL  I+D  LLK PE++++   +R
Sbjct: 157 GDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKVPSTKR 216

Query: 283 NRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDRAA-HGEQKMS 296
           ++ +YC+F  DH HA Q+   L++E+E LIR GYL+ +V   +A  +GE + S
Sbjct: 217 SKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKATQNGESEKS 269

BLAST of Lag0034687 vs. NCBI nr
Match: XP_030955724.1 (uncharacterized protein LOC115977839 [Quercus lobata])

HSP 1 Score: 145.6 bits (366), Expect = 7.4e-31
Identity = 87/239 (36.40%), Postives = 127/239 (53.14%), Query Frame = 0

Query: 75  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQ 134
           +C    T + G   A VW + +    + SSF+EL++ FV  F+G +   +   + LT++Q
Sbjct: 80  MCRAFPTTLKGP--ARVWFSKIPPSSV-SSFEELSKLFVNNFIGGQRHKRSSSSLLTIEQ 139

Query: 135 GRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAEAD--- 194
           G  ESL+ +I RF  E L V+  DD + L A  +G+  +  +  + +  P+ MAE     
Sbjct: 140 GENESLRSFITRFNREALSVDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELKRKR 199

Query: 195 -QRPRSHRVVVNQKA-----------------------RFERYTPLTASLEQVLAAIQDT 254
            +R  +H V  +++A                       R + YTPL A L QVL  I+D 
Sbjct: 200 AERMEAHPVRHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPLNQVLMQIKDD 259

Query: 255 NLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDR 287
             LK PEK++ DP++RN+NKYC F  DHGH   EC  L+ +IE LIR+G LK FVG DR
Sbjct: 260 PSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDR 315

BLAST of Lag0034687 vs. NCBI nr
Match: XP_024042801.1 (uncharacterized protein LOC112099618 [Citrus clementina])

HSP 1 Score: 142.1 bits (357), Expect = 8.1e-30
Identity = 93/265 (35.09%), Postives = 136/265 (51.32%), Query Frame = 0

Query: 84  SGRRWAAVWRNPLVYFELR----SSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRES 143
           + RRW         Y +LR    SSF +L++  V QF+GAR Q  P    L VKQG+ ES
Sbjct: 45  AARRW---------YRKLRPGSISSFAQLSQILVNQFVGARDQQFPPTYFLLVKQGKDES 104

Query: 144 LKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAE---------- 203
           LKD I RF  EV++VE + D VALT ++ GLQ  +   S++K   R   E          
Sbjct: 105 LKDCITRFNKEVVRVENYSDAVALTTIMVGLQPGKFHYSLAKNPARTFTELLSRAQKYSN 164

Query: 204 ------------------ADQRPRSHRVVVNQ--------------KARFERYTPLTASL 263
                             A++R      + N+              ++RF RYTPL    
Sbjct: 165 VDELTNAKRGANSDSPRVAEKRKIKEEQIKNKEKTSRLEKKGPKILQSRFPRYTPLNLPE 224

Query: 264 EQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGY 296
           EQVL  I++ +LL++P+ +++ P+RR+R+KYC +  DH H I++C  L++EI++LI+ GY
Sbjct: 225 EQVLMQIRNLDLLRKPKDIKIAPNRRDRSKYCRYHRDHRHNIEDCFDLKEEIKSLIQRGY 284

BLAST of Lag0034687 vs. NCBI nr
Match: XP_030970531.1 (uncharacterized protein LOC115990904 [Quercus lobata])

HSP 1 Score: 142.1 bits (357), Expect = 8.1e-30
Identity = 88/256 (34.38%), Postives = 129/256 (50.39%), Query Frame = 0

Query: 75  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQ 134
           +C    T + G   A VW + +    + SSF+EL++ FV  F+G +   +   + LT++Q
Sbjct: 11  MCRAFPTTLKGP--ARVWFSKIPPNSM-SSFEELSKLFVNNFIGGQRHKRSLSSLLTIEQ 70

Query: 135 GRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAE----- 194
           G  ESL+ +I RF  E L V+  DD + L A  +G+  +  +  + +  P+ MAE     
Sbjct: 71  GENESLRLFITRFNREALSVDEADDKLLLAAFHNGVNSDLFIHKLYEKEPQSMAELAHST 130

Query: 195 -----------ADQRPRSHRVVVN----------------------------QKARFERY 254
                      A +R RS R+  N                               R ++Y
Sbjct: 131 QNFMNAEDAIIAKKRKRSERMDTNPSRHHEQGTRPKKGRTEERRDRESKKPSPSVRNQQY 190

Query: 255 TPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIE 287
           TPL A LEQVL  I+D   LK P+K++ DP++RNRNKYC F  DHGH   EC  L+ +IE
Sbjct: 191 TPLNAPLEQVLMQIKDDPSLKWPKKMKRDPNKRNRNKYCRFHRDHGHDTDECFDLKQQIE 250

BLAST of Lag0034687 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 9.7e-37
Identity = 102/268 (38.06%), Postives = 140/268 (52.24%), Query Frame = 0

Query: 68  YGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQI 127
           YG      C    T ++G   A +W   L    + SSFK LARAFVTQF+G R + +P  
Sbjct: 221 YGVSEAVRCRVFSTTLNGS--ARIWFRQLKRGSI-SSFKSLARAFVTQFVGGRCRSRPVA 280

Query: 128 NSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPM 187
             LT+KQ   ESL+DY+ RF  E LQVEG  D V+L A +SG++DE L  S  K +P   
Sbjct: 281 YLLTIKQRTTESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTF 340

Query: 188 AEADQRPRSH------------------------------------RVVVNQK---ARFE 247
           +EA  R + +                                    R   +QK    +FE
Sbjct: 341 SEALSRAQRYMSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFE 400

Query: 248 RYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDE 296
           +YTP T  +EQVL  I+D  LLK PE+++    +R++ +YC+F  DHGHA Q+C  L++E
Sbjct: 401 KYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEE 460

BLAST of Lag0034687 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-31
Identity = 87/233 (37.34%), Postives = 125/233 (53.65%), Query Frame = 0

Query: 103 SSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVA 162
           SSFK LARAFVTQF+G R + +P    LT+KQ   ESL DY+ RF  E LQ+E   D V+
Sbjct: 37  SSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNKEKLQIESLTDVVS 96

Query: 163 LTAMISGLQDERLLSSISKISPRPMAE--------------------------------A 222
           L A +SG++DE L  S  K +P   +E                                +
Sbjct: 97  LLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKREPDGKRTDQKRERS 156

Query: 223 DQRPRSHRVVVNQKA-------RFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRR 282
             +P+  R     ++       +FE+YTP T  LEQVL  I+D  LLK PE++++   +R
Sbjct: 157 GDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKVPSTKR 216

Query: 283 NRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDRAA-HGEQKMS 296
           ++ +YC+F  DH HA Q+   L++E+E LIR GYL+ +V   +A  +GE + S
Sbjct: 217 SKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKATQNGESEKS 269

BLAST of Lag0034687 vs. ExPASy TrEMBL
Match: A0A2N9FPT8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16636 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.0e-29
Identity = 79/212 (37.26%), Postives = 119/212 (56.13%), Query Frame = 0

Query: 75  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQ 134
           +C    T + G   A +W   L+   +  SF +L+ +F   F+G +   +P  + L V+Q
Sbjct: 34  MCRAFPTTLKGP--ARIWFKKLIPGSV-GSFAQLSHSFFNHFIGGQRCGRPTTHLLNVRQ 93

Query: 135 GRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAEADQRP 194
              E+L+ Y+ RF  E L V+G DD V LTA ISGLQ    L S+ K  P  M+E  +R 
Sbjct: 94  REGETLRSYLTRFNKETLLVDGADDKVVLTAFISGLQSGDFLFSVYKDPPTSMSEMMKRE 153

Query: 195 RSHRVVVNQKARFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGD 254
             +R   N+  RF  +TPL A ++++   I+D   L+ P KL  +PD+R ++KYC F  D
Sbjct: 154 DRNRRGSNE--RFNHFTPLNAPVDRIFMQIKDDPALRWPGKLLTNPDKRAKDKYCRFHRD 213

Query: 255 HGHAIQECIQLRDEIEALIREGYLKGFVGNDR 287
           HGH   +C  L+ +IE LI++G L+ FV  D+
Sbjct: 214 HGHNTDDCYDLKRQIEELIKQGKLQRFVERDQ 240

BLAST of Lag0034687 vs. ExPASy TrEMBL
Match: A0A2N9IUL6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55593 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.3e-29
Identity = 81/229 (35.37%), Postives = 125/229 (54.59%), Query Frame = 0

Query: 68  YGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQI 127
           +G  +  +C    T + G   A  W N L    +  +F +L+RAF+  F+G R   +P  
Sbjct: 197 HGVSDEIMCRTFPTNLRGS--ARTWFNQLETSSI-DTFAQLSRAFIDNFIGGRRSARPAN 256

Query: 128 NSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPM 187
             L ++Q   ESL+ Y+ RF  E +Q++  ++ VALTA  +GL     L  + K  P+ M
Sbjct: 257 YLLNIRQREGESLRSYVQRFNKEAVQIDEPNEYVALTAFNAGLLKGDFLFQLCKDPPKSM 316

Query: 188 AEADQR------PRSHRVVVNQKARFER----YTPLTASLEQVLAAIQDTNLLKRPEKLR 247
           +E   +      P++ R   +   R E     +TPL  S++QVL  IQD   ++ P KLR
Sbjct: 317 SELMNKSSKQDYPKTERKNTSLSNRREERPSSFTPLNMSIDQVLLQIQDNPDIRWPGKLR 376

Query: 248 LDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDR 287
            DP++R++N YC F  DHGH  ++C  L+++IEALIR+G L  FV  D+
Sbjct: 377 SDPEKRSKNLYCRFHRDHGHTTEDCFALKEQIEALIRQGKLGKFVRQDK 422

BLAST of Lag0034687 vs. ExPASy TrEMBL
Match: A0A2N9HHE1 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41589 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.3e-29
Identity = 79/214 (36.92%), Postives = 117/214 (54.67%), Query Frame = 0

Query: 75  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQ 134
           +C    T + G   A +W   L+   +  SF +L+ +F   F+G +   +P  + L V+Q
Sbjct: 34  MCRAFPTTLKGP--ARIWFKKLIPGSV-GSFAQLSHSFFNHFIGGQRCGRPTTHLLNVRQ 93

Query: 135 GRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAEA--DQ 194
              E+L+ Y+ RF  E L V+G DD V LTA ISGLQ    L S+ K  P  M+E     
Sbjct: 94  REGETLRSYLTRFNKETLLVDGADDKVVLTAFISGLQSGDFLFSVYKDPPTSMSEMMNQG 153

Query: 195 RPRSHRVVVNQKARFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFR 254
           + R  R       RF  +TPL A ++++   I+D   L+ P KL  +PDRR ++KYC F 
Sbjct: 154 KKREDRNRRGSNERFNHFTPLNAPVDRIFMQIKDDPALRWPGKLLTNPDRRAKDKYCRFH 213

Query: 255 GDHGHAIQECIQLRDEIEALIREGYLKGFVGNDR 287
            DHGH  ++C  L+ +IE LI++G L+ FV  D+
Sbjct: 214 RDHGHNTEDCYDLKRQIEELIKQGKLQRFVERDQ 244

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158830.12.0e-3638.06uncharacterized protein LOC111025293 [Momordica charantia][more]
XP_022159368.13.3e-3137.34uncharacterized protein LOC111025785 [Momordica charantia][more]
XP_030955724.17.4e-3136.40uncharacterized protein LOC115977839 [Quercus lobata][more]
XP_024042801.18.1e-3035.09uncharacterized protein LOC112099618 [Citrus clementina][more]
XP_030970531.18.1e-3034.38uncharacterized protein LOC115990904 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DWY09.7e-3738.06uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DYL61.6e-3137.34uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A2N9FPT82.0e-2937.26Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9IUL63.3e-2935.37Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55593 PE=4 SV=1[more]
A0A2N9HHE13.3e-2936.92Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41589 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0034687.1Lag0034687.1mRNA