Lag0034458 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGGAGATGTAGAAAAAATGGTTGCGATCGGTCTAGTCTGGGGCAGCACTAACGCTCTGATGCGCCGTGGCGCTCTTCTGTGGGACCAAGCTCTCAAATCTTCTTCCAATTCAACCCACACTTCCACCAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCAATTTGGCAGTACACAGTCCCCTTTTTGCTTAATCTCACTGCCTCAGCTACCTTCTTCGCCATTCTAAGTGACGCCCCAATATCACTCGCCGTTCCGGTCACCAACGCCACGACTTTTGCTGCCACCGCCGTGTTCGGAATGCTCCTTGGCGAAGATACTCGTGTCGGGTACGCTCTGTTTGGTACCGCTCTGATTGGTTTGGGCGTATGGCTCTGCATTAACTAA ATGATCGGAGATGTAGAAAAAATGGTTGCGATCGGTCTAGTCTGGGGCAGCACTAACGCTCTGATGCGCCGTGGCGCTCTTCTGTGGGACCAAGCTCTCAAATCTTCTTCCAATTCAACCCACACTTCCACCAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCAATTTGGCAGTACACAGTCCCCTTTTTGCTTAATCTCACTGCCTCAGCTACCTTCTTCGCCATTCTAAGTGACGCCCCAATATCACTCGCCGTTCCGGTCACCAACGCCACGACTTTTGCTGCCACCGCCGTGTTCGGAATGCTCCTTGGCGAAGATACTCGTGTCGGGTACGCTCTGTTTGGTACCGCTCTGATTGGTTTGGGCGTATGGCTCTGCATTAACTAA ATGATCGGAGATGTAGAAAAAATGGTTGCGATCGGTCTAGTCTGGGGCAGCACTAACGCTCTGATGCGCCGTGGCGCTCTTCTGTGGGACCAAGCTCTCAAATCTTCTTCCAATTCAACCCACACTTCCACCAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCAATTTGGCAGTACACAGTCCCCTTTTTGCTTAATCTCACTGCCTCAGCTACCTTCTTCGCCATTCTAAGTGACGCCCCAATATCACTCGCCGTTCCGGTCACCAACGCCACGACTTTTGCTGCCACCGCCGTGTTCGGAATGCTCCTTGGCGAAGATACTCGTGTCGGGTACGCTCTGTTTGGTACCGCTCTGATTGGTTTGGGCGTATGGCTCTGCATTAACTAA MIGDVEKMVAIGLVWGSTNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIGLGVWLCIN Homology
BLAST of Lag0034458 vs. NCBI nr
Match: XP_022961299.1 (transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961300.1 transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961301.1 transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961303.1 transmembrane protein 234 homolog [Cucurbita moschata]) HSP 1 Score: 240.4 bits (612), Expect = 9.1e-60 Identity = 124/132 (93.94%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Lag0034458 vs. NCBI nr
Match: XP_023516356.1 (transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59 Identity = 123/132 (93.18%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Lag0034458 vs. NCBI nr
Match: KAG7023602.1 (Transmembrane protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 237.7 bits (605), Expect = 5.9e-59 Identity = 123/132 (93.18%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of Lag0034458 vs. NCBI nr
Match: XP_022987899.1 (transmembrane protein 234 homolog [Cucurbita maxima] >XP_022987900.1 transmembrane protein 234 homolog [Cucurbita maxima]) HSP 1 Score: 237.3 bits (604), Expect = 7.7e-59 Identity = 122/132 (92.42%), Postives = 128/132 (96.97%), Query Frame = 0
BLAST of Lag0034458 vs. NCBI nr
Match: XP_038879672.1 (transmembrane protein 234 homolog [Benincasa hispida]) HSP 1 Score: 235.7 bits (600), Expect = 2.2e-58 Identity = 125/132 (94.70%), Postives = 128/132 (96.97%), Query Frame = 0
BLAST of Lag0034458 vs. ExPASy Swiss-Prot
Match: Q54ZG7 (Transmembrane protein 234 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277575 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10 Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of Lag0034458 vs. ExPASy Swiss-Prot
Match: A0NGI1 (Transmembrane protein 234 homolog OS=Anopheles gambiae OX=7165 GN=AGAP012180 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 7.1e-07 Identity = 41/130 (31.54%), Postives = 72/130 (55.38%), Query Frame = 0
BLAST of Lag0034458 vs. ExPASy Swiss-Prot
Match: Q8R1E7 (Transmembrane protein 234 OS=Mus musculus OX=10090 GN=Tmem234 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 3.5e-06 Identity = 37/129 (28.68%), Postives = 59/129 (45.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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