Lag0034427 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0034427
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionATP-dependent RNA helicase DDX11-like protein
Locationchr3: 7295494 .. 7302592 (-)
RNA-Seq ExpressionLag0034427
SyntenyLag0034427
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCAAATGCATTTTTTGGGTTGAAGAGCTGTGGTTCTGGCTCTGCACCTAAAACTGATGGAGTCCACGTCTGTATGTGTATGATGGGGGTTTAAAGAGGACAGGGGTAGCCGGACCTTTTTCCCTTTTGGTTCTTATATCATATATCAAACAAAACTAAACATTATTGATGAATCATCATCAATATCTATGTGTCAGCGGATCATTAATCGCTCCCTTCTTCTTCATTCCTGTTTTTTCGATTCCACCAACCACCTCATTCATTTTTCCTTTTTTCTTTTTTCCTTCAAATCTTATGTGTTTCTTTCCATTTTCTTTACTGATAATCACGCAACTTACCAAACACAAAATTGCAATTAAACTTTTCAACAAAAAAACAACTTCTTTTACCCATGTGTCCCTGTAGATAAACCTTTATTCAAATTGCATCTTAAATTTGGTTAACTGTTAGCTATCTTTACTTTTCATTTCAAAATGTGTTACTATTTTTACCTTCCATTTGAATAAACAATTTTTTTACCTTTTGATATATATATATATTTAAGAATTGTTAAAAAAGATATTTTCATGTGAGTACAATGAACTAGAAGACACATGTTTTTGCCACAAAATTGATAGGTCATCAATTAAAAAACAATACATTAGAGTTGTTCTTCTTTTTGTTAAAATCTGTGACTTCAACTTAATTTTGTGTCAAACATGATTTTTGTTGAAATTAATGAATTTTTAATTTTTTTTAAACATTTTTTTGTGTGTTAAAAGAACACGAGTGAATTAATAGAAATTGAGAATAAGTTGAAAATTGCATCATTTTCTAAGTCTAGAGTTCTATTTGATGAAATAAAAAATTTAGAGTGAAAATCAATATTACCTAAAGAAGTTTAGGGTAAAAATTGATGTTAAACTTTTAGTGTTGTATTCACTTAGTCTATATTGTTGAGGATCCCATGTTGAGGATCCCACATTGAAAAGATTGGTGGAGACCTCACAATATATAAGCTACAAGGGTCACTCCACTCATTGTCAATTAGTTTTGAGATGAAACCCCATGTATTTGATATGATATCAGAGGCCATTAAACCCAAACGGGTATTTGGGATTCGAACCAAGAATGGTGAACCCATACTTAGAAAAGTTTTTAATAAGTGTTCTTGAACTTTAACGAAAACTTGGTACTAAATTAGTTTACTCCACTACATGTCATCATCAAATTGATAGACAAACTGAAATAGTTAATAGGACAATGACCCTTATGCTTAGGGCTATAATATAGATAAAAATATCAATACTTGAAAGGACTGTCTATCATTCATATAATTTGCATACAATAGAGTTGTCCATATAGTGTCACTAAATGTACTCCATTTGAGATTGTTTATAGTTTTAATCTTTTATCACCTATTGACTTGTTACATTTGCCTTCTAATGAGGTTGTGAATCTTCAAGTTGACAAAAACGTGACCATCACAATAGAGCTACATAAAGAGGTTAAAGAAAGAATTGAAATGCAAAATACCAAAGTAGGTGCAAGGATCAACCAATAGTGAAAACCTATGATATTCAAGGAAGGAGATTAGGGTTGGGTCCACCTTCGAAAGGAAAGATTTTTACACCAACAAGATTCCAAGCTAAACCTAAGGGGGAGATGGACCCTTCCAAGTATTGAAAAAAAGTCAAAGATAATGCCTATCAAATAGACCTAGAAGGTAAGTATAATGTGAGCTACTTGTAATGTTTCTGACTTGACTTCTTGCAATGCACGTGAAGAATTTGATTCGAGGACGAATCCTTCAAAAGAGGGATCAGAAGATGATATGAACCAGGACATCATTGTTTTATCTCCAATACCAATCACATGCTCAAGGGCCAATCAACTACATACAATTGGCTTTTAATTCCCACACATAAATATTGGTGAACTCAATTAAGGAAGCTCAAGGAAGGAAAATTGAATATTATGTCAAATGTTGCTACAAGATGAAAATAGAGCTCTATGTTAGAAATTTTTAGGTGCTTATATGTTTGGGTCATTGTTATGTCTTTAATTAGGTTTATTATTTATTTTAACTAAATATGCTCAAGGGTAGATTGGTCTTTTAGCTAAATAGCTAAACAGACTAGCTTTGAAGGAGGAATTAGGTGTTGTGTTTTTGAATGAAATCTTCGGTGTTCTTGATGACTGAGCCTCATCATCCACCTTGCAATCCTTGTAATCTGAAGTTGCATGTATGAAAATTCAGGTAGATCTCTGATCAACTTGCTTGTTATGTGTTCAAATCTTGAGTCACGAACTAGTTACCTCTTGGTCTTCAATCACAAGGTAACCTTCTTCTCTAATTCTATTTTGGAGTTGTGTTAATTAGATTAGAAATTTTAGTATATAATTGTGAATTAGGGGTTGATATATGGAAAGGATTTGTAGTTTTCAAATTATATAGAAAATATAATCGTGGGAAGAAATTGAAATAGTGGTTGCAGAAATTGAAGGTTTGGAAACCCGTGAAGGAAATGGGTTGTTTGGTGGCATTGGAAGAACAAAAAAACAAGTGGTCCATATATATATATATAAGAGAGGTTAGGTCAAAGAAAAAAGGAAAAGGAGAAAACTGAGAGAGTGTTTGTTTTTGTTTATGGATTGGGGAGTTGGAGTTGGAGAGATGTGGCCTTCACACTCTCTGTCGCCCCAATCACTCTTCCACTTACATTCTACTTTTTGGCCCACACAGATACAACCCCTCTACCTCTCCCTCTACCTTGCCTTTGGCCCAATTTCTCTTTTTCAATTTTTCAAATACCTATTGTCTTTGTTTTCCTAAACTATATAATTATTTTGATTTCAATCAATCCGTTTGATTTTTACAATTTCAGCTCTAATCTACTTCAAAATTGTATTTTCATTTTAAATCCCTAAAGTCTACTCTTCTTTTCATTTCACCTTCGAGTTTCGAAAAATTATTTCATATATATAGTCGTCACATTGTAGCTGTCATCCTCTAAACCTTTGGATGCATGATGATTTAAAACTATGATTTTTGGTTTCTCCTTCCTACATTCAACAGTATAAAACCATTAACCATGCATTGCACCAACTCTTTAAATAACTTTTAATGGGGGATTCATTCAACATACATTAGTACTATAGTGAAATTAAAGGTAGTATATTAGAGATATCATGTATTGATGAATATACAATGACTCAATTAGTTAAGACTAGAGGTGAGAGGTTTGAATCTCTCTTTCCACATGTGGTGAGCTCTAAAAAAAAAGTGAGTTAGTTGAGAATTATCTTTAGATTTATTTCTCCTTTATATAATTTACTTGTGATAACCATTTGATCTTTTGGTTTTTAAAAATTAAGTTTATAACACCGATCTATAATTTTCTTTGTTTTGTTATTGACCTTTTTCCATGTTTTCAAAAACCAAGTTAAGTTCTTGAAAACTTATTTTTATTTTTTAAATTTGGCTAGAATTATTAATAATTCTAATGTTTCCTAAAAAAGGATGAAAACAATTATAAGAAAATTGAGAGAAACAAACATAATTTTAAAAAATCAAAAACCAAAAACCAAATGGTTATGTTGGAGTCTTAAAATTCTAAATCTTCATTTAATAATGATGGTTTATACTTGATTTATTCTATTATTTTTTGTTCAAGTTAAAAAAATATGTTTATATAATAGTTAAAATTTACTATAGTGAATCACATTAAATTAAAAAAAAAAAAGGTCCTTATTATATAACAATCAATTTCTCACCTTTAAGATTTAGATTTTTTTAAAAAGATTATTTAGAATTTTAAAGTTATATAAGGTGAGAAAATGGGTGTTTTAGATTCTATATACATATAAGATGGCTTTGGGTCCTTTTATTTGACTAGAATTTTTAAAGATAGACCTATCCTTTTCTGAATAGATTTTTTAATTAAAAAAAAAATTGAACCTTTAAGATTCAATTTGCAAGGACATATGTTTTCGTGATTGATTTTCTTAAGCAATGGGTTTAATTTTAATGGTTTTTTTTTAATAACTACAATATAATATATAGTCAAGATAGGTAGGGGTATCTTCAACCATGCAATTTTATTGCGTGATTAACGGGATTGTTTTGTTTTGTCCCAAATCCCAAAGCAGTACACACAAAACTATTGAAAAGTATACTCTTTAAAAAAAAAAAAAAAAACCATTGAAAAGTATCAACTTGCTTTCATACTTTATTAGGAATCATGATTCAACTTGTAAATTTCAACTCATGATCTATTTAGCTTGGTGGCCTTTTGGATGCATCATATGAAATGATGGTAATAAACCCTATAATTTAAGTTTGTAATTACACACTTAAATAGACACATGTATAACATTCGATAATCATTTAGAATAATCTATATTGGTGGGAGTCAACATTGTGGAGAACGAACTTTACATTTTGGTAGAAAATATCGAGGAAAGATATTAATGGAACATCATACAAGACTTTCTACTGACCTCTAGACAATGCAATGGCGTAACTAGTTGTCCGTGGAAGACTCATCAAGTGGGGGTCTCTCCCTAGTGTTGATTGTGTTTGTGCAAGAAATGCCCTTGTTATTTTCATTTTCTTGTTTTGTTTGGTTGAGTTTGTTTTGACATTTATTTGTACACAAAGAAAGATAAAAGAAAAAAAACACTTAATAATAATTGAATAATGGTTCAATATCTATGGATTCTTTATAATAACTGTTATGGGTAAATATGGACCACACCATAATCCAAAGAGTAAGCAAGACAATACAATACTAGTCCAAGGAGACAACCAGGAAGCGGGCCCTGAAGGAGGAACGGGCTAGAGGGTCGGGCCAAGGCCAGAAAGATCAGACCTTGGTTCGAGCATTATGGTCGCCCTTGGCCCAAGGCCGAGGCTCTTACCATTTGTCCATTTGCACGGGCCGAGCCCTTATGCCCCCATTCGGTCTTTGTCGCCCCGGTCCATCCCGGTTCCACACGTTTCAGCCCTAAATCGCCTCTGAACGCCAAGAAAACCCTAAGGAAAGACACATGTATAAATGGAGCTTCCCACACCCAGAAAAGGGGTTCGAAAAATCTATCTACCAAAATATTTTTTACTGTTGATCTGACTTAGGCATCGGAGTGCAGGTGGCCTACACCACATCGGTGTGCAGCGGTTCTTGCTGGTCTTGCAGGTCACGTCTTCTCCAGCTTCTACAAATTCACCGTTAGTGTCACATGAAGGTCAGGTGAGTTTTCTATCCGAATTTTGGTATCAACAATAACAAATAGTAGAGACCAATAACATTATACTTGTATGTTGGTCAACTAATATGTAGTAAATAAATAATACTTATACTAAACACATCTCATTTAAGTGTTGTTTTGGTTTTTAGAACCCTAATTTGTAATAACATCAGAAAGAAAACAAGCCCTAAAAGTTGGGTTTTGAAATTTAGAAATATTAAAAAGAAAAAGAAGACTAATTTTTAAGGAACCACCCGCTCCTTTGCTCCTCCTAAAAAGGCTAAATACACCAACCAGAGGCAGCTTTAGACACAGAAACAAACCTTTTAGATTAAATATTCCCTTTATGGATTTCTTGAAATTAGGAACCAAAAACCAAACAAGAGTACACAACCAAAATCAAATGGAGCGTGTCATCTATCTATTATCAAAAACGGAAAAACACTTTTTCAAAAAAAAACAAAAAAACCAAAGTGATAATACCCAACAAAAATTTTCAAAAAGAAAATTCTACTCCAAGGTTGGACCAAAACAGAAAAAAAAAAAAAAAAAATCATCCCTAAACTTATCACGGTGTACCAATTTTCACCATAAATTTTGAATTACATCAAATTAGATCTTAATTTAGCTAAATGTTACAATTTCTACTCTCTATTCACTTTTCGCTCATGAATAATTTTAACAAAAAAAAAAAAAAAAGCAACAATGTAAATATTTATGCAAACTCACTAATTGCAATAATATCAATAATAATAATGATAATAATATCAAGTTTGCTCCAACTTAAGTTTGATGGATGTTAAGTTTGTCGAAATTCATAAATTTTAACCATAATTTAGCTCTAATTTAGTTTTCTTGGAAATTTTATAAATTTTGTATCATTTTGAAAGCATATTTTATTAATTTTCAAACGAAAATTTATTCGAAGGTAAAATTTGCAATAACTTTCAAGTTTAAAGTTAAAATTGCTAATTCTTTTTTAAAATTGATATAAAAAAAAAAAAGGAACAAAAAATAGTAATCCATCGACGTCGGCTCCTCCGACTTTGTTTACTAGATAAAGAAATCTTGAACGAGTGATCATAATTACCAACTCCAAACCCCTTCATATTTATTACACACATTGTCTTCTTCTTCTCTTCTCTCTTCACACCAAATAAAACAAATCAAAACTCACTCACTCCAAAACCCCAATGTTGCTACGATCCTCCATTTCCACCACCAAAAAATTCTTCAAAAAAACCTTATGTAACTTCAAATCTTTCTTCTCCAACAGCTACCACCGCCTGCCCAAGGCGGCGCCGCCCTTCGCCGCCGGCCCCGACATGGACAAAGACTCAACCTTTCACTTCATTTCATCCCAAAAAGAGGTCAAAAATGGAAGCTTTATGAAGAACAGCAATGCTATGGCTAATTCAGTCCATTTCTCGAAGACAATCGACGAGACCCAGATGGAAAGAGTCGAGAAAAATCAACAGAGCATCAGAATTCGAGCGACCCATCAAAGGAAAACGCAAGAAAATTGCGAATCGAGCTCGAAGAGTTCTAGTTTGAATCAGTACGACGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATTAAAGAGTTGGAAAAACTAGACGCGAGAAATGTGGATCATACTTTGGATATTGAAGAGGTTCTTCATTACTACTCTCGTCTCACTTGTCCAACATATCTTGAAATCGTGGACAGATTCTTCATGGAGATTTTTGCTGAATTTTGTTCTAACAATTCTTCTTCTCAACAAAATTGCACTGTGAAATCCAGGCGAATTGGGTCGGAATCGGTGGGCTTAGAGAGAAGATCAAAATCTCGTTTGGGAAATTTGGAGCCCTTCGTCCTCTGA

mRNA sequence

ATGAAGGCAAATGCATTTTTTGGGTTGAAGAGCTGTGGTTCTGGCTCTGCACCTAAAACTGATGGAGTCCACGTCTGTAGATCTCTGATCAACTTGCTTGTTATGTGTTCAAATCTTGAGTCACGAACTAGTTACCTCTTGGTCTTCAATCACAAGTCCAAGGAGACAACCAGGAAGCGGGCCCTGAAGGAGGAACGGGCTAGAGGGTCGGGCCAAGGCCAGAAAGATCAGACCTTGGTTCGAGCATTATGGTCGCCCTTGGCCCAAGGCCGAGGCTCTTACCATTTGTCCATTTGCACGGGCCGAGCCCTTATGCCCCCATTCGGTCTTTGTCGCCCCGGTCCATCCCGGCATCGGAGTGCAGGTGGCCTACACCACATCGGTGTGCAGCGGTTCTTGCTGGTCTTGCAGGTCACGTCTTCTCCAGCTTCTACAAATTCACCCTACCACCGCCTGCCCAAGGCGGCGCCGCCCTTCGCCGCCGGCCCCGACATGGACAAAGACTCAACCTTTCACTTCATTTCATCCCAAAAAGAGGTCAAAAATGGAAGCTTTATGAAGAACAGCAATGCTATGGCTAATTCAGTCCATTTCTCGAAGACAATCGACGAGACCCAGATGGAAAGAGTCGAGAAAAATCAACAGAGCATCAGAATTCGAGCGACCCATCAAAGGAAAACGCAAGAAAATTGCGAATCGAGCTCGAAGAGTTCTAGTTTGAATCAGTACGACGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATTAAAGAGTTGGAAAAACTAGACGCGAGAAATGTGGATCATACTTTGGATATTGAAGAGGTTCTTCATTACTACTCTCGTCTCACTTGTCCAACATATCTTGAAATCGTGGACAGATTCTTCATGGAGATTTTTGCTGAATTTTGTTCTAACAATTCTTCTTCTCAACAAAATTGCACTGTGAAATCCAGGCGAATTGGGTCGGAATCGGTGGGCTTAGAGAGAAGATCAAAATCTCGTTTGGGAAATTTGGAGCCCTTCGTCCTCTGA

Coding sequence (CDS)

ATGAAGGCAAATGCATTTTTTGGGTTGAAGAGCTGTGGTTCTGGCTCTGCACCTAAAACTGATGGAGTCCACGTCTGTAGATCTCTGATCAACTTGCTTGTTATGTGTTCAAATCTTGAGTCACGAACTAGTTACCTCTTGGTCTTCAATCACAAGTCCAAGGAGACAACCAGGAAGCGGGCCCTGAAGGAGGAACGGGCTAGAGGGTCGGGCCAAGGCCAGAAAGATCAGACCTTGGTTCGAGCATTATGGTCGCCCTTGGCCCAAGGCCGAGGCTCTTACCATTTGTCCATTTGCACGGGCCGAGCCCTTATGCCCCCATTCGGTCTTTGTCGCCCCGGTCCATCCCGGCATCGGAGTGCAGGTGGCCTACACCACATCGGTGTGCAGCGGTTCTTGCTGGTCTTGCAGGTCACGTCTTCTCCAGCTTCTACAAATTCACCCTACCACCGCCTGCCCAAGGCGGCGCCGCCCTTCGCCGCCGGCCCCGACATGGACAAAGACTCAACCTTTCACTTCATTTCATCCCAAAAAGAGGTCAAAAATGGAAGCTTTATGAAGAACAGCAATGCTATGGCTAATTCAGTCCATTTCTCGAAGACAATCGACGAGACCCAGATGGAAAGAGTCGAGAAAAATCAACAGAGCATCAGAATTCGAGCGACCCATCAAAGGAAAACGCAAGAAAATTGCGAATCGAGCTCGAAGAGTTCTAGTTTGAATCAGTACGACGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATTAAAGAGTTGGAAAAACTAGACGCGAGAAATGTGGATCATACTTTGGATATTGAAGAGGTTCTTCATTACTACTCTCGTCTCACTTGTCCAACATATCTTGAAATCGTGGACAGATTCTTCATGGAGATTTTTGCTGAATTTTGTTCTAACAATTCTTCTTCTCAACAAAATTGCACTGTGAAATCCAGGCGAATTGGGTCGGAATCGGTGGGCTTAGAGAGAAGATCAAAATCTCGTTTGGGAAATTTGGAGCCCTTCGTCCTCTGA

Protein sequence

MKANAFFGLKSCGSGSAPKTDGVHVCRSLINLLVMCSNLESRTSYLLVFNHKSKETTRKRALKEERARGSGQGQKDQTLVRALWSPLAQGRGSYHLSICTGRALMPPFGLCRPGPSRHRSAGGLHHIGVQRFLLVLQVTSSPASTNSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSKSSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSESVGLERRSKSRLGNLEPFVL
Homology
[Close]
BLAST of Lag0034427 vs. NCBI nr
Match: XP_022973644.1 (uncharacterized protein LOC111472233 [Cucurbita maxima])

HSP 1 Score: 228.4 bits (581), Expect = 9.3e-56
Identity = 128/204 (62.75%), Postives = 153/204 (75.00%), Query Frame = 0 

Query: 110 LCRPGPSRHRSAGGLHHIGVQRFLLVLQVTSSPASTNSPYHRLPKAAPPFAAGPDMDKDS 169
           L R  P ++ S   L  I   +      + +  +  ++ YHRLPKAAPPF AGP+M KD 
Sbjct: 28  LHRHSPKQNPSMFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKD- 87

Query: 170 TFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQE 229
                    EV+NGSF K++    N+VHFSKTID+TQM+RVEKN+QSI+I ATHQRK+QE
Sbjct: 88  ---------EVQNGSFTKSNG--NNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQE 147

Query: 230 NCESSSK-SSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYL 289
           N ES SK S  L +YDERR+CLVAKKIKELEKLDARNVDH+LDIEE+LHYYSRLTCPTYL
Sbjct: 148 NRESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYL 207

Query: 290 EIVDRFFMEIFAEFCSNNSSSQQN 313
           EIVD FFM++FAEFCSN+SSSQ N
Sbjct: 208 EIVDTFFMDMFAEFCSNSSSSQHN 219

[Close]
BLAST of Lag0034427 vs. NCBI nr
Match: KAG6587958.1 (hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021847.1 hypothetical protein SDJN02_15575, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.8 bits (569), Expect = 2.3e-54
Identity = 123/169 (72.78%), Postives = 142/169 (84.02%), Query Frame = 0 

Query: 146 NSPYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDE 205
           ++ YHRLPKA  PPF AGP+M KD          +V+NGSF K++    N+VHFSKTID+
Sbjct: 26  SNTYHRLPKAPPPPFTAGPEMAKD----------DVQNGSFTKSNG--NNAVHFSKTIDK 85

Query: 206 TQMERVEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQYDERRMCLVAKKIKELEKLDA 265
           TQM+RVEKN+QSI+I ATHQRKTQEN ES SK SS L +YDERR+CLVAKKIKELEKLDA
Sbjct: 86  TQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCLVAKKIKELEKLDA 145

Query: 266 RNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN 313
           RNVDH+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN+SSSQQN
Sbjct: 146 RNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQN 182

[Close]
BLAST of Lag0034427 vs. NCBI nr
Match: XP_022933508.1 (uncharacterized protein LOC111440909 [Cucurbita moschata])

HSP 1 Score: 222.2 bits (565), Expect = 6.7e-54
Identity = 123/169 (72.78%), Postives = 141/169 (83.43%), Query Frame = 0 

Query: 146 NSPYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDE 205
           ++ YHRLPKA  PPF AGP+M KD          EV+NGSF K++    N+VHFSKTID+
Sbjct: 26  SNTYHRLPKAPPPPFTAGPEMAKD----------EVQNGSFTKSNG--NNAVHFSKTIDK 85

Query: 206 TQMERVEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQYDERRMCLVAKKIKELEKLDA 265
           TQM+RVEKN+QSI+I ATHQRKTQEN ES SK SS L +YDERR+CLVAKKIKELEKLDA
Sbjct: 86  TQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCLVAKKIKELEKLDA 145

Query: 266 RNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN 313
           RNV H+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN+SSSQQN
Sbjct: 146 RNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQN 182

[Close]
BLAST of Lag0034427 vs. NCBI nr
Match: XP_023515883.1 (uncharacterized protein LOC111779922 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.2 bits (544), Expect = 1.8e-51
Identity = 126/195 (64.62%), Postives = 144/195 (73.85%), Query Frame = 0 

Query: 146 NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDET 205
           ++ Y RLPKAAPPF+ G +MDKDS              SFMKNSN   N+VHFSKTIDET
Sbjct: 26  SNTYQRLPKAAPPFSIGHEMDKDS--------------SFMKNSN--GNAVHFSKTIDET 85

Query: 206 QMERVEKNQQSIRIRATHQRKTQENCESSSKSSSLNQYDERRMCLVAKKIKELEKLDARN 265
           QM++VEKN+ SI+I  THQRKTQEN         L +YDERRMC VAKK+KELEKLDAR+
Sbjct: 86  QMKKVEKNEDSIKIGVTHQRKTQEN---------LKEYDERRMCSVAKKMKELEKLDARD 145

Query: 266 VDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSE-S 325
           VDH LDIEE+LHYYSRL+CPTYLEIVD+FFM+IFAEFC+N SS Q N       IG E S
Sbjct: 146 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQIN------PIGHESS 188

Query: 326 VGLERRSKSRLGNLE 340
            GL RR KSRLGN+E
Sbjct: 206 AGLVRR-KSRLGNVE 188

[Close]
BLAST of Lag0034427 vs. NCBI nr
Match: XP_022145016.1 (uncharacterized protein LOC111014544 [Momordica charantia])

HSP 1 Score: 213.0 bits (541), Expect = 4.0e-51
Identity = 124/191 (64.92%), Postives = 146/191 (76.44%), Query Frame = 0 

Query: 146 NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDET 205
           ++ YHRLPK  PPFAAGP M+KDSTF FISSQKEV++G FMKN+   +N++HF   ++ET
Sbjct: 26  STSYHRLPKTPPPFAAGPRMEKDSTFQFISSQKEVQSGGFMKNN---SNALHFPNKMEET 85

Query: 206 QME--RVEKNQQSI-RIRATHQRKTQENCESSSKSSSLNQYDERRMCLVAKKIKELEKLD 265
           QME   V+K+  S+  I ATHQRK QEN +  S S  +   DERRMCLVAKKIKELEKLD
Sbjct: 86  QMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYI--IDERRMCLVAKKIKELEKLD 145

Query: 266 ARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGS 325
           +RNVDH LDIEE+LHYYSRLTCP YLEIVD+FF EIFAEF S NSSSQ   T+K R I  
Sbjct: 146 SRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF-SANSSSQPCHTIKPRLIRP 205

Query: 326 ESVGLERRSKS 334
           +SVGL +R  S
Sbjct: 206 QSVGLVKRRTS 210

[Close]
BLAST of Lag0034427 vs. ExPASy TrEMBL
Match: A0A6J1IF62 (uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 4.5e-56
Identity = 128/204 (62.75%), Postives = 153/204 (75.00%), Query Frame = 0 

Query: 110 LCRPGPSRHRSAGGLHHIGVQRFLLVLQVTSSPASTNSPYHRLPKAAPPFAAGPDMDKDS 169
           L R  P ++ S   L  I   +      + +  +  ++ YHRLPKAAPPF AGP+M KD 
Sbjct: 28  LHRHSPKQNPSMFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKD- 87

Query: 170 TFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQE 229
                    EV+NGSF K++    N+VHFSKTID+TQM+RVEKN+QSI+I ATHQRK+QE
Sbjct: 88  ---------EVQNGSFTKSNG--NNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQE 147

Query: 230 NCESSSK-SSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYL 289
           N ES SK S  L +YDERR+CLVAKKIKELEKLDARNVDH+LDIEE+LHYYSRLTCPTYL
Sbjct: 148 NRESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYL 207

Query: 290 EIVDRFFMEIFAEFCSNNSSSQQN 313
           EIVD FFM++FAEFCSN+SSSQ N
Sbjct: 208 EIVDTFFMDMFAEFCSNSSSSQHN 219

[Close]
BLAST of Lag0034427 vs. ExPASy TrEMBL
Match: A0A6J1F4Y2 (uncharacterized protein LOC111440909 OS=Cucurbita moschata OX=3662 GN=LOC111440909 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.2e-54
Identity = 123/169 (72.78%), Postives = 141/169 (83.43%), Query Frame = 0 

Query: 146 NSPYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDE 205
           ++ YHRLPKA  PPF AGP+M KD          EV+NGSF K++    N+VHFSKTID+
Sbjct: 26  SNTYHRLPKAPPPPFTAGPEMAKD----------EVQNGSFTKSNG--NNAVHFSKTIDK 85

Query: 206 TQMERVEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQYDERRMCLVAKKIKELEKLDA 265
           TQM+RVEKN+QSI+I ATHQRKTQEN ES SK SS L +YDERR+CLVAKKIKELEKLDA
Sbjct: 86  TQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCLVAKKIKELEKLDA 145

Query: 266 RNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN 313
           RNV H+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN+SSSQQN
Sbjct: 146 RNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQN 182

[Close]
BLAST of Lag0034427 vs. ExPASy TrEMBL
Match: A0A6J1CV44 (uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014544 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.0e-51
Identity = 124/191 (64.92%), Postives = 146/191 (76.44%), Query Frame = 0 

Query: 146 NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDET 205
           ++ YHRLPK  PPFAAGP M+KDSTF FISSQKEV++G FMKN+   +N++HF   ++ET
Sbjct: 26  STSYHRLPKTPPPFAAGPRMEKDSTFQFISSQKEVQSGGFMKNN---SNALHFPNKMEET 85

Query: 206 QME--RVEKNQQSI-RIRATHQRKTQENCESSSKSSSLNQYDERRMCLVAKKIKELEKLD 265
           QME   V+K+  S+  I ATHQRK QEN +  S S  +   DERRMCLVAKKIKELEKLD
Sbjct: 86  QMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYI--IDERRMCLVAKKIKELEKLD 145

Query: 266 ARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGS 325
           +RNVDH LDIEE+LHYYSRLTCP YLEIVD+FF EIFAEF S NSSSQ   T+K R I  
Sbjct: 146 SRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF-SANSSSQPCHTIKPRLIRP 205

Query: 326 ESVGLERRSKS 334
           +SVGL +R  S
Sbjct: 206 QSVGLVKRRTS 210

[Close]
BLAST of Lag0034427 vs. ExPASy TrEMBL
Match: A0A6J1H9I9 (uncharacterized protein LOC111461329 OS=Cucurbita moschata OX=3662 GN=LOC111461329 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.4e-51
Identity = 124/195 (63.59%), Postives = 144/195 (73.85%), Query Frame = 0 

Query: 146 NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDET 205
           ++ Y RLPKA PPF+ G +MDKDS              SFMKNSN   N+V FSKT+DET
Sbjct: 26  SNTYQRLPKAPPPFSIGHEMDKDS--------------SFMKNSN--GNAVRFSKTMDET 85

Query: 206 QMERVEKNQQSIRIRATHQRKTQENCESSSKSSSLNQYDERRMCLVAKKIKELEKLDARN 265
           QM++VEKN+ SI+I  THQRKTQEN         L +YDERRMCLVAKK+KELEKLDAR+
Sbjct: 86  QMKKVEKNEDSIKIGVTHQRKTQEN---------LKEYDERRMCLVAKKMKELEKLDARD 145

Query: 266 VDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSE-S 325
           VDH LDIEE+LHYYSRL+CPTYLEIVD+FFM+IFAEFC+N+SS Q N       IG E S
Sbjct: 146 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTN------PIGKESS 188

Query: 326 VGLERRSKSRLGNLE 340
           VGL RR KSRLG +E
Sbjct: 206 VGLVRR-KSRLGKVE 188

[Close]
BLAST of Lag0034427 vs. ExPASy TrEMBL
Match: A0A6J1JFL9 (uncharacterized protein LOC111485292 OS=Cucurbita maxima OX=3661 GN=LOC111485292 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45
Identity = 120/195 (61.54%), Postives = 137/195 (70.26%), Query Frame = 0 

Query: 146 NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDET 205
           ++ Y RLPK          MDKDS              SFMKNSN   N+VHFSKTI ET
Sbjct: 26  SNTYQRLPK----------MDKDS--------------SFMKNSN--GNAVHFSKTIRET 85

Query: 206 QMERVEKNQQSIRIRATHQRKTQENCESSSKSSSLNQYDERRMCLVAKKIKELEKLDARN 265
           QM++VEKN+ SI+I ATHQRKTQEN         L  YDERRMCLVAKK+KELEKLDAR+
Sbjct: 86  QMKKVEKNEDSIKIGATHQRKTQEN---------LKVYDERRMCLVAKKMKELEKLDARD 145

Query: 266 VDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSE-S 325
           VDH LDIEE+LHYYSRL+CPTYL+IVD+FFM+IFAEFC+N SS Q N       IG + S
Sbjct: 146 VDHALDIEEILHYYSRLSCPTYLQIVDKFFMDIFAEFCANPSSQQTN------PIGHQSS 178

Query: 326 VGLERRSKSRLGNLE 340
           VGL RR KSRLGN+E
Sbjct: 206 VGLVRR-KSRLGNVE 178

[Close]
BLAST of Lag0034427 vs. TAIR 10
Match: AT3G16070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15260.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-09
Identity = 28/82 (34.15%), Postives = 49/82 (59.76%), Query Frame = 0 

Query: 219 IRATHQRKTQENCESSSKSSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHY 278
           ++  H+ + QE      K+ + + Y  R    + KKI E+   +  +++  LD+EE LHY
Sbjct: 69  LKLEHKVQEQEQYHQVKKTEACSSYSSRDCDTMEKKINEMYMTETVDIEQALDVEEALHY 128

Query: 279 YSRLTCPTYLEIVDRFFMEIFA 301
           YSR++ P YL IVD+FF ++++
Sbjct: 129 YSRISSPVYLNIVDKFFTDLYS 150

[Close]
BLAST of Lag0034427 vs. TAIR 10
Match: AT1G15260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-08
Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 0 

Query: 222 THQRKTQENCESSSKSSSLNQYD-ERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYS 281
           THQ+      +   K  +    D ++R   +A+K+K+L  +D R+VDH LD+ E L  YS
Sbjct: 76  THQKSLNNQHKKKPKKVAEPFEDAKKRGDALAQKMKDLNMVDLRDVDHALDVREALRCYS 135

Query: 282 RLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN 313
            +  P YL+IVD FF +++ EF    +S++ N
Sbjct: 136 SIRSPVYLDIVDNFFTDMYYEFSDPRTSAKIN 167

[Close]
BLAST of Lag0034427 vs. TAIR 10
Match: AT3G24535.1 (unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 24/66 (36.36%), Postives = 42/66 (63.64%), Query Frame = 0 

Query: 243 YDERRMCLVAKKIKELEKLDARNV----DHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEI 302
           + + ++ LV  K+KE+EK+   ++     +  D+ E LH YSRL    YL++V+ FFME+
Sbjct: 94  FSQPKVNLVRTKLKEMEKMMNDDIISDEYYVSDVIEFLHCYSRLRYTAYLDVVENFFMEV 153

Query: 303 FAEFCS 305
           +++F S
Sbjct: 154 YSDFFS 159

The following BLAST results are available for this feature:
BLAST of Lag0034427 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022973644.19.3e-5662.75uncharacterized protein LOC111472233 [Cucurbita maxima][more]
KAG6587958.12.3e-5472.78hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022933508.16.7e-5472.78uncharacterized protein LOC111440909 [Cucurbita moschata][more]
XP_023515883.11.8e-5164.62uncharacterized protein LOC111779922 [Cucurbita pepo subsp. pepo][more]
XP_022145016.14.0e-5164.92uncharacterized protein LOC111014544 [Momordica charantia][more]
BLAST of Lag0034427 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0034427 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IF624.5e-5662.75uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233... [more]
A0A6J1F4Y23.2e-5472.78uncharacterized protein LOC111440909 OS=Cucurbita moschata OX=3662 GN=LOC1114409... [more]
A0A6J1CV442.0e-5164.92uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1H9I94.4e-5163.59uncharacterized protein LOC111461329 OS=Cucurbita moschata OX=3662 GN=LOC1114613... [more]
A0A6J1JFL91.6e-4561.54uncharacterized protein LOC111485292 OS=Cucurbita maxima OX=3661 GN=LOC111485292... [more]
BLAST of Lag0034427 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G16070.11.8e-0934.15unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G15260.12.6e-0835.87unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G24535.12.1e-0536.36unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..239
NoneNo IPR availablePANTHERPTHR35461BNAANNG14610D PROTEINcoord: 147..318
NoneNo IPR availablePANTHERPTHR35461:SF3BNAANNG14610D PROTEINcoord: 147..318

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0034427.1Lag0034427.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane