Lag0034395 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0034395
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionChromo domain-containing protein
Locationchr3: 6955032 .. 6962503 (+)
RNA-Seq ExpressionLag0034395
SyntenyLag0034395
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTGTAACTCAAGATGGGTTCGATGGTTGCCTTGGGCGGAGTTTAGTTACAATACGTCTTACCATTCAGGTCTGAAGACAAGCCCTTTTGAGGTTGTTTACGGGCGTCCTCCTCCATCAATCTTGCCGTATGTGAGTAATGGGTCTTGTGTTTCTGAAGTGGACAAACAACTCAAGGAGAGGGATGCGATGTTGTCGGTGATTAGAGAGAGGTTAGCTTATGCACAACAGTACATGCGTACTTATGCGAATGAGAAGCGCAAACATGTGGAGTTGGATGTAGGGGATTGGGCTTACTTGAAACTTCGCCCATATAGACAAGGAACCTTGGCCAGGCACTTTAATGCTAAACTCGCCCAAGGTTTGTGGGACCATTCCGGGTGGAGGCTAGGGTGGGGAACGTGGCTTACCGGTTGACGTTACCGGATAATGCCAAGATACATCCTGTGTTTCATGTTCTCAGCTTTGCAAGGCGCTCGGGAACACTCTTCCAGTAACTCCGTTTCCTCCAATATGTCTCCGGACTTCGTCTTCAAGTTGGAGCCAGAGTTGTTAGGCATTCGGCAGTCCATTGATGATGCGACCAAGTTAGAGGTGTTGATCAGATGGGAAGACATGGAGTGGCAGAGGCCACATGGGAGGATGCAGTGTGGGTCAATAACCAGTTCCCGAGCTTCCATCTTGAGGACAAATGGTTCTTTGGGGGCCGGGTAGTGATAGGCCTCCTATTAAGTACGTGTATTCTAGAAGGCGTAAGAGGGATGTACCGGTTGATGGTTAATGGTTAGTCCGTTTGGTAGTTGTAGTTGGTGGTTAAGGTAGTTGGAGGTAGTAGGTTATATAGGTAGAAGCTGGGTGAGGGGGGTACCTTTTGTCTAGTGTGTTGTAGTGGGAAAGGGGGGAGAGGTTGGGGAAGCTCTCGAATACTTCCCTGGGTGTACTACTTGTTGATAAATAAAGTACTCTGTTCTTATCAACTACTATCCTTACTATACCTCTATTAGTACTCTCACACAAACTTTGAGATAAAAAATTTCGGGGTTTGGATCAAGGGTGATGTTATATCATTGTTCATGAGGAATATTTAGTTTCTCAAATCATTTTCTCTAATCAAGGTTTCAAAAATTGATGAAAGCTTTGAAAAGCTTATTTTAGAATAAGATGACATAAACATTTAGGATCACTTTCACGTGGTCATCATAGTTAAGGATTTTTAATGGACACAAAATATGGCCAAATTTCGTCCATCAGTGTGTGATTTTTAGTTTTGCTCCTTCTTGAAAAAGGGGAAGAAAACCTCATAACTCTAAACGTAGCAATTGAGGGATTAATAATGGAGATTTGAGAATATTTTAGAAAATGACAAAGATGTTAATTCACCAATCAACCCAAAAACTTAAGTTGATCGGTTACAATAAATTGAATTATATCAATACTTTATCATAAGATATTAGGTGCTAGAAAGAAGTTGGATTGTATTGGTCAACGAGATGGATAAGGGATAATATTTTAGATTTATTGAGTTTTATTGTTCCTTTATTTAAGATAAAAGACAAAATTTCGGTTCTAATTTGACCTATCTCCATAATTTTATTTTATTCTAATGGGATTTTCAACTCAATATCCGTATTGGGCTTTGTAGGCCTACTTTCCCTCACACTTCCACATAAATAAGCCCAGCTATTTCTGTTTAAAATTAAAATAAAACTATTTTATTATAATTATTTAATATTTTAAAAGTAGCTGAATCTTCACGCCTCTTTGTTAACGGCTATTTTTTTTATTTACCATGCAGTTTCAATTTGACGCTCTAATGAAGTTGATGTGAGATTATATGGGGACCATGGGGTCATAATTTTACTCTGCCGATCCACCATAGTTTCAAGAACTCCAATAATTTATTTTCATGGAAAACTGTGTAAGTATCTTATTCTTAGTAATTGTGTTTGATCATTGTAGGGGCAATGAGTTTCAGCTTCCAATAAATTAATTTCTTTCCAGTTAACTATGAATTTTCAGCTAGGAATTCGATTTAACTTAAAAAAACCTGCTTCATGTTTTCAATTTTATATGGTAGTTGAAGGCGGTATTTGAAGTTGATTAGTTTCAATTTTACTGGAACAGGAAAATCTTTGTCCATGGACAAAGTGAAAGAGAGCAGTTGGTTGCTTGGGTGAAGGAGGTAAGCTTTTAACTCATAGCTATTGAATAAACTCATCTTCATGAACGTTCAAGTCTAAGCTAAAAATTTTGCTGGTTACCAGTCAGGTCTTCAGCTGCCATACATCTTGTCCATAAACTGTGTAGGCATTGCCTTTCGTCATCTTTCAACTGCAAGCACTGGAGCTCTGTGCTAGAGTACGTTTGATGATATTTTTACAATGGAAACAAGTTAAACTTTATAATAACTTCATATTTTTAATTCTAAAGAATGGTACTTAAATTTTTATGAATTTGTCTTGCAAAATTAGGTGCCTGCTCGATAATGATGTTGTTTCTAAAAGATCATGTTTGTCAACTAATAATCTTCTTTGATTTGCACTCAAAGTTTAAAATTTTAACTAAATTTTAGAAACAAAATTGTTAATAAACGGGCGTACACGTTAGATTTTCATTTATTATTGATTGATGACCAATCTTGGGAAAATTAACGGTCTATTTTGTAACTGGTTCAAACTTAGTTTATTGCTACATGACATCTGAATACAAGTTTGGCTTTAGAGCTCATGGAAAATGCGTTGCAGAAAGTTTCAGCGGTCTGGAGAGATATGAGAAAAGTTCTGTGTTTGCAGGTTAGTGTTTGTACATTCATTAATGTAACTTTGTCATAAAGCTGAGTTATATCATAGCTTACAAATGGTTAGGTATCCAGAAAACACCAAATACTAATATATTGAAATAACGAAAGGGAACTACAAAATAACGAAAGCCTTTCGAAAGGACTAATTCTCTACTAGGGGTGAGAAAAAAACCCGAAAACCGAGCCGACCGACCGAAACGACGTCGGTCGATCGGTTTTTGTATAGGATCGGTCAGGGTTGGTTTTCCTTGATGAAAAACCGACCAATTGGTCGGTTGGTGAGCCCAATAGAGCTCAAACCAAATGAACCGACCGATATTTTGTTAAATTAAAAAAAAATAGAATACTCGTTTTCCACCGTGAAGGCGTGAATTTAAAGAAAACCACAATGAGAGGGAACTACTATATAACGATAGCCTTTCAAAAGGACTAATTCTCTATCCCGAAAATCCCACAATGAGACAATACCCAAAATCTACCACACCCACTAAGGCTCCCTACTCTCGTATTTGTAACCAAGACCTCCTAACTAATTACCAAAACACACTCCTAACTAATTACTACATTTTCCATTCTACTATTCTACTGCTATCCCTACTATACCTCTATTAGTACTGTCACACTACTCCCCATTCAAAAGACGCCTTGTCCTCAAGGTTTGCTTACAAAACAATTACATTCTCAGTTTCTTTATGGATCTATGTTAGTACTCTCACACAAACTTTGAGATAAAAATTTTCGGGGTTTGGATCAAGGGTGATGTTATATCATTGTTCATGATGAATAGTTTGTCAAATCATTTTCTCGAATCAAGGTTTTGAAAATTGATGATACTAAGAATTCATGCTCCAGGATTTAAATAGAGATTACTTTGTCAAGATTACATATAGATGTTTTGACATTTCCTACACTTTATTGGATGGATTCACATCCATTGGTGGATGATTTTGAACTTTGCTAGTTTTAGGACTAGTCGAGGATAACCTCAAGACTCTAATGGGAGTAATGAAGGAGGTTTGAGTGTATTTTGAACAATATGAATTTCTAGAATAAAACATATTTGGACAATTGTTGCTCGAGAAAAGTTGGATTGTATTGGTCAAGAAGATAGATAATAACTATGGATTAAAGAAAAACTCGAATTTCAATTGGAAAGAAAAGTACTTTGTTACTACAATGGAATATTGGACATAAGAATGATACTAAGTTTTCATGGTCTTGGATTTGAAGAGAGATTACTTTATCAACTTTACATATAGATGTTTAGACATTTTCTCCACTTTAGTTGATGGAAGCAAAGACATTTAGAATTCACTTTCACGTGGCCGACTTATGTAAGGATTCACTTCCATTGGTGGATGATTTTTGAATTTGCTAGTTTTAGGACTAGTCGAGGGAAACCTCAAGATCTAATGCGAGCAATAAAGAGGTAAAAGAGGTTTGAGTGTTATGGAATTTGCTAGTTTTGGACCATATTTGCTCGAGAAAAGTTAGATTGCATTGGTCATCAAGTCGGATAAATGACAATATTTTTGATTTGTTGAGTCTTATGGATATTTTAGATGAGGACAATAACTTTGGATGAGAGAAAGGTACTTTTTTACTATAGGGGAATATTGGATAAGAAAATGATACTAAGAATTCATGCTTCTGGATTTAAATAGAGATTACTTTGTCAAGATTACATATATAGATTTTTTGACATTTCCTACACTTTTGTTGATGGATTCACATCCATTGGTGGATGATTTTGGACTTTGCTAGTTTTAGGACTAGTCGAGGACAACCTCAAGACTCTAATGGGAGTAATGAAGAGGTTAGTAAAGGAGGTTTGAGTGTATTTTGAAAAACAAGAATTTCCAGAATAAAACATATTCAGACAATTGTTGCTCGAGAAAATTTGGATTGTATTAGTCAAGAAGATGGATAATAACTTTGGATTAGAGAAAGAACTCGAATTTCAATTGGAAAGAATAGTACTTTGTTACTACAACGGAATATTGGACATAAGAATGATACTAAATATTCATGGTCTTGGATTGAAAGAGAGATTCATGGTCTTGGATTTAAAGAGAGATTACATTATCAAGATTTCATATAGATGTTTAGACATTTTCTAGACTTTAGATCATGGAAGCAAAGGCATTTAGAATTCACTTTCATGTGGCCGACGTATGTAAGGATTCACTTCCATTGGTGGATGATTTTGGAATTTGCTAGTTTTAAGACTAGTCGCAGGAAACCTCAAGATCTAAAGCAAGCAATTAAGAGGTTAGTAAAGGAGGTTTGAGTGTTATGGAATTTGCTAGTTTTGGACAATATTTGCTCGAGAAAAGTTGGATTGGATTGGTCATCGAGTTGGATAAAGGGCAATATTTTGGATTTATTGAGTCTTATGGATATTTTAGATGAGGATAATAACTTTGAATTAAAGAAGGAATACGAATTCAATTGGAGAGAAATGTACATTTTTACTATAGGGGGAATATTTGATAAAAAATGTGATACTAAGAATTCATGTTCCTGGATTTAAATAGAGATTACTTTGTCAAGATTACATATATAGATTTTTTTGACATTTCCTACACTTTTGTTGATGGATTTACATCCATTGGTGGTTGATTATGGACTTTGCTAGTTTTAGGACTAGTGGAGGAAAACCTCAAGACTCTAAGGGAGTAGTCGAGAGGTTACTAAAAGGAGGTTTGAATTTATTTTGAACAATATGAATTTCTAGAATAAAACATATCTGGACAATTATTGCTCGAGAAAAGTTAGATTATATTGGTCAAGAAGATGGATAATAACTTTGGATGTAAGAAAGAACTCGAATTTGAATTGGAAGGAAAAGTACTATGTTACTACAATGGAGTATTGGGCATATGAATGATACCATGTTTTCATGGTCTTTGATTTAAAGAGAGATTACTTTATGAAGATTACGTATAGATGTTTAGATATTTTCTACACTTTAGTTGATGGAAGCAAAGGCATTTAGAATTCACTTTCAAGTGGCCGACAAATGTAAGGATTCACTTCCATTGGTGGATGATTTTGGAGTTTGCTAGTTTTAGGACTAGTCGAGGGAAACCTCAAGATCTAAAGCGAGCAATGAAGAGGTTAGTAAAGGAGGTTTGAGTGTTATGGAATTTGCTAGTTTTGGACATTATTTGCTCGAGAAAAGTATGATTGCATTGGTCATCAAGTCGGATAAATGGCAATATTTTGGATTTGTTGTCTTATGGATATTTTTATGGGGATTTATGGGGATAATAACTTCGGATTAAAGAAGGAATAAGAATTCAATTGAAGAGAAAGGTACTTTGTTACTATAGGGGGATTATTGGATAAAAAAATGATACTAAGAATACATGCTCCTGGATTTAAATAGAGATTATTTTTTCAAGATTACATATTGATGTTTTGACATTTCCTACACTTTTGTTGATGGATTCACATCCATTGGATGATGATTTTGAACTTTGCTAGTTTTAGGACTAGTCGAGGATAACCTCAAGACTCTAATGGGAGCAATGAAGAGGTTAGTAAAGGAGGTTTGTGTGTATTTTGAACAATATGAATTTCTAGAATAAAACATATTTGGACAATTGTTGCTCGAGAAAAGTTGGATTCTATTGGTCAAGAAGATGGATAATAACTTTGTATTAAAGAAACAACTCGAATTTCAATTCGAAAGAAAAGTACTTAGTTACTGGAATGGAATATGAAGTACTAGAATTGGTGTTTGAGAAAAGTAGGATTATATTGGTTAAGAAGATGGATAAGGAGGATAATGTTCTGGATTTTTTGAGTTTTTAATGGATTTTGACATGACAATTTTAGGTATTGAATAAAAGAAGAGATTAAAATTTCATGGGCTTTGATTTGAGGAGGCATAACTTTGAAAGGATAAGAGAAATGTTTTGACATTTTCTACACTTTAGTTTATGTAAGCCTCAAGACATTTAGAATTCACTTTCGCGTGGAGGATTATTTTGGACTTTGATAGTTTCGAGACTCTAACGAGAGCAATCGAGAGGTTAGTAAAGGATGTTTGAGTGTATTTTGAACAATATGAAGTACTAGAGTAAAACATGTTTTGACAATTGTTGCTTGAGAAAGGTTGGATTGTATTGGTCAAGAAGTCGGATAACGAACAATTTTTTTCTATTTGTTGAGTGTTTTGGATATTTAAGATGAAGATAATAACTTTGGATTAAAGAGAGAACTCAAATTCAATTGGAGTGAAAAGTACTTTGTTACTACAATGGATTATTGGACGTAAGAATGATACTAAGTTTTCATGGTTCATGGTCTTGGATTTAAAGAGAGATAACTTTATCAGGTTTACATATGGATGTTTAGACATTTTCTAGACTTTAGTTGACGGAAGCAAAGGCATTTAGAATTCACTTTGACGTGGCCGACGTATGTAAGGATTCAATTCCATTGGTGGATGATTTTTGAATTTGCTAGGTTTAGGACTAGTCGAGGGAAACCTCAAGATGTAAAGCGAGCAATGAAGAGGTTAGTAAAAGGAGGTTTGACTGTTATGGAATTTTCTAGTTTTGGACAATATTTGCTCGAGAAAAGTTGGATTGTATTGGTCATCAAGTCGGATAAAGGGCAATATTCTGGATTTGTTGAGTCTTATGGATATTTTAGATGA

mRNA sequence

ATGCATTGTAACTCAAGATGGGTTCGATGGTTGCCTTGGGCGGAGTTTAGTTACAATACGTCTTACCATTCAGGTCTGAAGACAAGCCCTTTTGAGGTTGTTTACGGGCGTCCTCCTCCATCAATCTTGCCGTATGTGAGTAATGGGTCTTGTGTTTCTGAAGTGGACAAACAACTCAAGGAGAGGGATGCGATGTTGTCGGTGATTAGAGAGAGGTTAGCTTATGCACAACAGTACATGCGTACTTATGCGAATGAGAAGCGCAAACATGTGGAGTTGGATGTAGGGGATTGGGCTTACTTGAAACTTCGCCCATATAGACAAGGAACCTTGGCCAGGCACTTTAATGCTAAACTCGCCCAAGCTTTGCAAGGCGCTCGGGAACACTCTTCCAGTAACTCCGTTTCCTCCAATATGTCTCCGGACTTCGTCTTCAAGTTGGAGCCAGAGTTGTTAGGCATTCGGCAGTCCATTGATGATGCGACCAAGTTAGAGGTGTTGATCAGATGGGAAGACATGGAGTGGCAGAGGCCACATGGGAGGATGCAGTGTGGGTCAATAACCAGTTCCCGAGCTTCCATCTTGAGGACAAATGGTTCTTTGGGGGCCGGGAAAATCTTTGTCCATGGACAAAGTGAAAGAGAGCAGTTGGTTGCTTGGGTGAAGGAGGCATTGCCTTTCGTCATCTTTCAACTGCAAGCACTGGAGCTCTGTGCTAGATTTGGCTTTAGAGCTCATGGAAAATGCGTTGCAGAAAGTTTCAGCGGTCTGGAGAGATATGAGAAAAGTTCTGTGTTTGCAGGACTAGTCGAGGACAACCTCAAGACTCTAATGGGAGTAATGAAGAGATCATGGAAGCAAAGGCATTTAGAATTCACTTTCATGTGGCCGACGTATGTAAGGATTCACTTCCATTGGTGGATGATTTTGGAATTTGCTAGTTTTAAGACTAGTCGCAGGAAACCTCAAGATCTAAAGCAAGCAATTAAGAGGACTAGTGGAGGAAAACCTCAAGACTCTAAGGGAGTAGTCGAGAGGTTACTAAAAGGAGGACTAGTCGAGGATAACCTCAAGACTCTAATGGGAGCAATGAAGAGGTTTAGGACTAGTCGAGGGAAACCTCAAGATGTAAAGCGAGCAATGAAGAGGTTAGTAAAAGGAGGTTTGACTGTTATGGAATTTTCTAGTTTTGGACAATATTTGCTCGAGAAAAGTTGGATTGTATTGGTCATCAAGTCGGATAAAGGGCAATATTCTGGATTTGTTGAGTCTTATGGATATTTTAGATGA

Coding sequence (CDS)

ATGCATTGTAACTCAAGATGGGTTCGATGGTTGCCTTGGGCGGAGTTTAGTTACAATACGTCTTACCATTCAGGTCTGAAGACAAGCCCTTTTGAGGTTGTTTACGGGCGTCCTCCTCCATCAATCTTGCCGTATGTGAGTAATGGGTCTTGTGTTTCTGAAGTGGACAAACAACTCAAGGAGAGGGATGCGATGTTGTCGGTGATTAGAGAGAGGTTAGCTTATGCACAACAGTACATGCGTACTTATGCGAATGAGAAGCGCAAACATGTGGAGTTGGATGTAGGGGATTGGGCTTACTTGAAACTTCGCCCATATAGACAAGGAACCTTGGCCAGGCACTTTAATGCTAAACTCGCCCAAGCTTTGCAAGGCGCTCGGGAACACTCTTCCAGTAACTCCGTTTCCTCCAATATGTCTCCGGACTTCGTCTTCAAGTTGGAGCCAGAGTTGTTAGGCATTCGGCAGTCCATTGATGATGCGACCAAGTTAGAGGTGTTGATCAGATGGGAAGACATGGAGTGGCAGAGGCCACATGGGAGGATGCAGTGTGGGTCAATAACCAGTTCCCGAGCTTCCATCTTGAGGACAAATGGTTCTTTGGGGGCCGGGAAAATCTTTGTCCATGGACAAAGTGAAAGAGAGCAGTTGGTTGCTTGGGTGAAGGAGGCATTGCCTTTCGTCATCTTTCAACTGCAAGCACTGGAGCTCTGTGCTAGATTTGGCTTTAGAGCTCATGGAAAATGCGTTGCAGAAAGTTTCAGCGGTCTGGAGAGATATGAGAAAAGTTCTGTGTTTGCAGGACTAGTCGAGGACAACCTCAAGACTCTAATGGGAGTAATGAAGAGATCATGGAAGCAAAGGCATTTAGAATTCACTTTCATGTGGCCGACGTATGTAAGGATTCACTTCCATTGGTGGATGATTTTGGAATTTGCTAGTTTTAAGACTAGTCGCAGGAAACCTCAAGATCTAAAGCAAGCAATTAAGAGGACTAGTGGAGGAAAACCTCAAGACTCTAAGGGAGTAGTCGAGAGGTTACTAAAAGGAGGACTAGTCGAGGATAACCTCAAGACTCTAATGGGAGCAATGAAGAGGTTTAGGACTAGTCGAGGGAAACCTCAAGATGTAAAGCGAGCAATGAAGAGGTTAGTAAAAGGAGGTTTGACTGTTATGGAATTTTCTAGTTTTGGACAATATTTGCTCGAGAAAAGTTGGATTGTATTGGTCATCAAGTCGGATAAAGGGCAATATTCTGGATTTGTTGAGTCTTATGGATATTTTAGATGA

Protein sequence

MHCNSRWVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQLKERDAMLSVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKLAQALQGAREHSSSNSVSSNMSPDFVFKLEPELLGIRQSIDDATKLEVLIRWEDMEWQRPHGRMQCGSITSSRASILRTNGSLGAGKIFVHGQSEREQLVAWVKEALPFVIFQLQALELCARFGFRAHGKCVAESFSGLERYEKSSVFAGLVEDNLKTLMGVMKRSWKQRHLEFTFMWPTYVRIHFHWWMILEFASFKTSRRKPQDLKQAIKRTSGGKPQDSKGVVERLLKGGLVEDNLKTLMGAMKRFRTSRGKPQDVKRAMKRLVKGGLTVMEFSSFGQYLLEKSWIVLVIKSDKGQYSGFVESYGYFR
Homology
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BLAST of Lag0034395 vs. NCBI nr
Match: TYK05712.1 (nucleolar complex protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 1.9e-29
Identity = 76/174 (43.68%), Postives = 102/174 (58.62%), Query Frame = 0 

Query: 7   WVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQLKERDAML 66
           WV WLPWAE+ YNT+    L  SPF+ VYGR PPS+L Y   G+  S VD+QL+ERD  L
Sbjct: 278 WVEWLPWAEYWYNTTCQRALGVSPFQGVYGRKPPSLLSYRDGGTTNSTVDEQLRERDVAL 337

Query: 67  SVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKLAQALQGA 126
           + +RE L  AQQ M+ YA+ KR+HVE +VGD  +LK+RPYRQ TL R  N KL+    G 
Sbjct: 338 AALREHLLLAQQQMKQYADRKRRHVEFNVGDLVFLKIRPYRQLTLRRKCNEKLSPKYFGP 397

Query: 127 REHSSSNSVSSNMSP-------DFVFKLEPELLGIRQSIDDATKLEVLIRWEDM 174
            E        + + P       +F ++ +PE   +    + A   EVLI W+ +
Sbjct: 398 SELKKMLGNQTKIQPTIQCVNENFEWQTQPE-EAVEYQKNQAGSSEVLICWKGL 450

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BLAST of Lag0034395 vs. NCBI nr
Match: PON75651.1 (Ribonuclease H-like domain containing protein, partial [Trema orientale])

HSP 1 Score: 139.4 bits (350), Expect = 7.1e-29
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = 0 

Query: 7   WVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQLKERDAML 66
           W  WLPWAE+ YNTS+H+ +KT+PF  +YGR PP +LPY    + VS +DKQL+ERD ML
Sbjct: 2   WAHWLPWAEYWYNTSFHTSIKTTPFRFLYGRDPPQLLPYDKGATVVSSLDKQLQERDTML 61

Query: 67  SVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKLAQALQG 126
             ++ +L  AQQ M+T A++ R+ ++ +VGD  YLKLRPYRQ +LAR +N KL+    G
Sbjct: 62  EDLKIQLHRAQQRMKTTADKHRREIQFEVGDLVYLKLRPYRQRSLARRYNEKLSPRYYG 120

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BLAST of Lag0034395 vs. NCBI nr
Match: KAA0032312.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYJ99433.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-27
Identity = 70/182 (38.46%), Postives = 112/182 (61.54%), Query Frame = 0 

Query: 3   CNSR---WVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQL 62
           C+ R   WV WLPW E+ YNT+++  L TSPF+V+YGR PPS+L Y +  +  S +  QL
Sbjct: 155 CSERPKEWVSWLPWTEYWYNTTFNRSLGTSPFQVLYGRKPPSLLSYGNGTTTNSTLADQL 214

Query: 63  KERDAMLSVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKL 122
           KER  +L+ +RE+L    Q M+ YA++KR+HVE +VGDW  LK+RPYRQ +L +  N KL
Sbjct: 215 KERGTVLAALREQLLLTHQQMKQYADKKRRHVEFNVGDWVLLKIRPYRQLSLRKKRNQKL 274

Query: 123 AQALQGAREHSS---SNSVSSNMSPDFVFKLEPELLGIRQSIDDATKLEVLIRW--EDME 177
           +    G  E  +   + +   ++  DF+      +  +++ + D T ++  +++  E++E
Sbjct: 275 SPKYFGPYEIQAKVRTVAYKLDLPTDFLIHPVFHVSQLKRFVGDRTGIQPTLQFVNENLE 334

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BLAST of Lag0034395 vs. NCBI nr
Match: GEW16886.1 (hypothetical protein [Tanacetum cinerariifolium])

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-27
Identity = 72/167 (43.11%), Postives = 102/167 (61.08%), Query Frame = 0 

Query: 7   WVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQLKERDAML 66
           W +WLPWAE+ YNTSYHS ++T+PF+++YGR PP ++ Y    +   EVD+ L+ERD  L
Sbjct: 481 WAKWLPWAEYWYNTSYHSTIQTTPFKILYGRDPPRLISYDRGTALTFEVDRYLRERDRTL 540

Query: 67  SVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKLAQALQGA 126
           + +R +   AQQ M+  A+ KR+ V L+VGD  YLKLRPYRQ ++A+  N KLA    G 
Sbjct: 541 AELRSQFLRAQQIMKAQADRKRRDVSLEVGDRVYLKLRPYRQTSVAQRTNQKLAPRYYGP 600

Query: 127 REHSSSNSVSSNMSPDFVFKLEPELLGIRQSIDDATKLEVLIRWEDM 174
            E         NM P+       E++G R  +D+  K  VLI W+ +
Sbjct: 601 YE---------NMEPE-------EVIGSR-IVDEQRK--VLIAWKGL 628

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BLAST of Lag0034395 vs. NCBI nr
Match: KAD6119863.1 (hypothetical protein E3N88_11134 [Mikania micrantha])

HSP 1 Score: 134.4 bits (337), Expect = 2.3e-27
Identity = 70/181 (38.67%), Postives = 112/181 (61.88%), Query Frame = 0 

Query: 5   SRWVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQLKERDA 64
           ++W  +LPWAE+SYNT YH+   T+PF VVYGR PPS+LPYV+  +  +E++KQL +RD 
Sbjct: 647 TKWSAYLPWAEYSYNTGYHTATNTTPFSVVYGREPPSLLPYVTGETKNAELEKQLVDRDD 706

Query: 65  MLSVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKLAQALQ 124
           M+ ++R+ L  AQ  MR+ AN+KR+ +   VGD+ +LK++PYRQ TLA+    KL+    
Sbjct: 707 MIKLLRQNLQKAQDRMRSQANKKRRELTFQVGDYVFLKIQPYRQKTLAKRRYEKLSPRFF 766

Query: 125 GAR--EHSSSNSVSSNMSPDFVFKLEPELLGIRQSIDDATK--LEVLIRW-----EDMEW 177
           G    + +     +  ++ D+   L+P+ +   + + +A    LE+LI W     E+  W
Sbjct: 767 GPYRIKRAVVPPTALPVTKDWEIDLQPDSVITHRWVYEAGSPVLELLISWCNRPIEESTW 826

[Close]
BLAST of Lag0034395 vs. ExPASy TrEMBL
Match: A0A5D3C3C0 (Nucleolar complex protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001940 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.1e-30
Identity = 76/174 (43.68%), Postives = 102/174 (58.62%), Query Frame = 0 

Query: 7   WVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQLKERDAML 66
           WV WLPWAE+ YNT+    L  SPF+ VYGR PPS+L Y   G+  S VD+QL+ERD  L
Sbjct: 278 WVEWLPWAEYWYNTTCQRALGVSPFQGVYGRKPPSLLSYRDGGTTNSTVDEQLRERDVAL 337

Query: 67  SVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKLAQALQGA 126
           + +RE L  AQQ M+ YA+ KR+HVE +VGD  +LK+RPYRQ TL R  N KL+    G 
Sbjct: 338 AALREHLLLAQQQMKQYADRKRRHVEFNVGDLVFLKIRPYRQLTLRRKCNEKLSPKYFGP 397

Query: 127 REHSSSNSVSSNMSP-------DFVFKLEPELLGIRQSIDDATKLEVLIRWEDM 174
            E        + + P       +F ++ +PE   +    + A   EVLI W+ +
Sbjct: 398 SELKKMLGNQTKIQPTIQCVNENFEWQTQPE-EAVEYQKNQAGSSEVLICWKGL 450

[Close]
BLAST of Lag0034395 vs. ExPASy TrEMBL
Match: A0A2P5DQU9 (Ribonuclease H-like domain containing protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_245000 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.4e-29
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = 0 

Query: 7   WVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQLKERDAML 66
           W  WLPWAE+ YNTS+H+ +KT+PF  +YGR PP +LPY    + VS +DKQL+ERD ML
Sbjct: 2   WAHWLPWAEYWYNTSFHTSIKTTPFRFLYGRDPPQLLPYDKGATVVSSLDKQLQERDTML 61

Query: 67  SVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKLAQALQG 126
             ++ +L  AQQ M+T A++ R+ ++ +VGD  YLKLRPYRQ +LAR +N KL+    G
Sbjct: 62  EDLKIQLHRAQQRMKTTADKHRREIQFEVGDLVYLKLRPYRQRSLARRYNEKLSPRYYG 120

[Close]
BLAST of Lag0034395 vs. ExPASy TrEMBL
Match: A0A5B6YMA8 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_002383 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-28
Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 0 

Query: 7    WVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQLKERDAML 66
            WV+WLPW E++YNTSYHS +KT+PFEVVYG+PPP++L Y+   + V  VDK L ERDA L
Sbjct: 1102 WVKWLPWVEYTYNTSYHSSIKTTPFEVVYGQPPPTLLSYIPGTTVVDAVDKALIERDAFL 1161

Query: 67   SVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKLAQALQG 126
             ++R+RL  AQ  M+   ++  + VE  VG+W YL+L+PYRQ ++    N KL+    G
Sbjct: 1162 KIVRQRLLDAQGRMKQEYDKHHREVEFSVGEWVYLRLQPYRQLSVTARKNQKLSPKFYG 1220

[Close]
BLAST of Lag0034395 vs. ExPASy TrEMBL
Match: A0A5D3BJH1 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold316G00220 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.0e-28
Identity = 70/182 (38.46%), Postives = 112/182 (61.54%), Query Frame = 0 

Query: 3   CNSR---WVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQL 62
           C+ R   WV WLPW E+ YNT+++  L TSPF+V+YGR PPS+L Y +  +  S +  QL
Sbjct: 155 CSERPKEWVSWLPWTEYWYNTTFNRSLGTSPFQVLYGRKPPSLLSYGNGTTTNSTLADQL 214

Query: 63  KERDAMLSVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKL 122
           KER  +L+ +RE+L    Q M+ YA++KR+HVE +VGDW  LK+RPYRQ +L +  N KL
Sbjct: 215 KERGTVLAALREQLLLTHQQMKQYADKKRRHVEFNVGDWVLLKIRPYRQLSLRKKRNQKL 274

Query: 123 AQALQGAREHSS---SNSVSSNMSPDFVFKLEPELLGIRQSIDDATKLEVLIRW--EDME 177
           +    G  E  +   + +   ++  DF+      +  +++ + D T ++  +++  E++E
Sbjct: 275 SPKYFGPYEIQAKVRTVAYKLDLPTDFLIHPVFHVSQLKRFVGDRTGIQPTLQFVNENLE 334

[Close]
BLAST of Lag0034395 vs. ExPASy TrEMBL
Match: A0A5N6PCV8 (Reverse transcriptase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_11134 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-27
Identity = 70/181 (38.67%), Postives = 112/181 (61.88%), Query Frame = 0 

Query: 5   SRWVRWLPWAEFSYNTSYHSGLKTSPFEVVYGRPPPSILPYVSNGSCVSEVDKQLKERDA 64
           ++W  +LPWAE+SYNT YH+   T+PF VVYGR PPS+LPYV+  +  +E++KQL +RD 
Sbjct: 647 TKWSAYLPWAEYSYNTGYHTATNTTPFSVVYGREPPSLLPYVTGETKNAELEKQLVDRDD 706

Query: 65  MLSVIRERLAYAQQYMRTYANEKRKHVELDVGDWAYLKLRPYRQGTLARHFNAKLAQALQ 124
           M+ ++R+ L  AQ  MR+ AN+KR+ +   VGD+ +LK++PYRQ TLA+    KL+    
Sbjct: 707 MIKLLRQNLQKAQDRMRSQANKKRRELTFQVGDYVFLKIQPYRQKTLAKRRYEKLSPRFF 766

Query: 125 GAR--EHSSSNSVSSNMSPDFVFKLEPELLGIRQSIDDATK--LEVLIRW-----EDMEW 177
           G    + +     +  ++ D+   L+P+ +   + + +A    LE+LI W     E+  W
Sbjct: 767 GPYRIKRAVVPPTALPVTKDWEIDLQPDSVITHRWVYEAGSPVLELLISWCNRPIEESTW 826

The following BLAST results are available for this feature:
BLAST of Lag0034395 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK05712.11.9e-2943.68nucleolar complex protein 2-like protein [Cucumis melo var. makuwa][more]
PON75651.17.1e-2952.10Ribonuclease H-like domain containing protein, partial [Trema orientale][more]
KAA0032312.11.0e-2738.46Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYJ99433.1 Tran... [more]
GEW16886.11.3e-2743.11hypothetical protein [Tanacetum cinerariifolium][more]
KAD6119863.12.3e-2738.67hypothetical protein E3N88_11134 [Mikania micrantha][more]
BLAST of Lag0034395 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0034395 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C3C09.1e-3043.68Nucleolar complex protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A2P5DQU93.4e-2952.10Ribonuclease H-like domain containing protein (Fragment) OS=Trema orientale OX=6... [more]
A0A5B6YMA82.9e-2850.42Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_002383... [more]
A0A5D3BJH15.0e-2838.46Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5N6PCV81.1e-2738.67Reverse transcriptase domain-containing protein OS=Mikania micrantha OX=192012 G... [more]
BLAST of Lag0034395 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..79
e-value: 2.8E-9
score: 38.5
NoneNo IPR availablePANTHERPTHR46148:SF38PROTEIN NYNRIN-LIKEcoord: 4..122
NoneNo IPR availablePANTHERPTHR46148FAMILY NOT NAMEDcoord: 4..122

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0034395.1Lag0034395.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0034641 cellular nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
molecular_function GO:0003676 nucleic acid binding