Lag0034319 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0034319
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionmethyl-CpG-binding domain-containing protein 11-like
Locationchr3: 6288836 .. 6291084 (-)
RNA-Seq ExpressionLag0034319
SyntenyLag0034319
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAACTCATTGCACAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGCCGTATCCATAGTGTCACCAGGATAAGGCACCCAGTCTTATCCCTATACTATAAACCCTTTAGGTTGTTTCTTGAACAATGATCCCATATGTCGCTACATATAGTTCAAGACTCATATTACAACCTTGGATGTCTAGTTTATTGGATTAGGGTTATTATTAGGCAAAGACAAATATAAAATAACTAATAACAATTAATGGAAAAATATATCAATATTATTTCATTAATATCCGGTCAACGGTTACATTCACTATCTACGAGTTTTAGGGCATAAAACCCAACACGGTCGTGGTCGACCTTCGCTGATCGGCCTTCGCCGACTGACCCCCACCGACCTTCGTTGACCAGTTGCTACAGTTGACCTCTGACTACCAGATGCCACCATCGACCTCCGACTACCGGCTGCCACTATCGTCGTCGACCGAAACTTGTTCCTTTTTTTTCTTATTTTCAACAACTGCCACCACGCGTCGACGATTTTTCCAGCATTCGCCGCTGACTGTCTGCATTCGCTCAGTGGTCGAAGGTCAGTAGCGATGACCGATGATCAACGTTGGCGGGTGATCGGTAACAATGGTGGTAGTGATGAGGAAGAAGAAGAAGAAATAAAAAAATAATAGTAGAAAATTAATATATTTTTATATTATATGTACTAAATTTTATTTTAACTAAAAAAACAAGAAACAAGAATCGGTTATCAAACACATTTTGTGTTTCTGTTTCTTTTTTCAGAGAAACAAGGAACAAAAATAGTTATCAAACATGTTTCTGTTTCTACTTCTTAAAAAACAAGAAACAAGAAACAAGAAACCAGAAACCAGAAATAGGAAACGAGAACGTTATCAAACGGGGCCGTACTTGCCTGCTCCTCCTGGTTGGAAGAAAAAGGTTTCCTCCATTTCTTCCTGTTTTTAATCTTTCTGATTACCAGTGTGTTAGTTTTAGGATTGCCCATTTGCCCATTTTGTTGCGCTGTGAATTTGCAGGGCTTCTGTGTTAGAATTTAAAGCTCCACTACACTTGTATAGAGGTTAGGGCTAATGGACATCCTTGGAATTAAGCTCTGTTCAATTCTGGATTCATATGCTTTTGGGTTTTCTAGAAACTGTCTTTTTGTTCAATTGTTTTGAATTTAATGTTAGGTACTCATTAGCAAAAGTGGGTGTTGGTTCTGTCTCTGAATCTTCTTTATCATCATCTCTATTTTCCTAGTTTTGTTTATGTTTACTTTTTCTCTCTTTTGAGTGAATGGTTCTTTCTAATTGGGAGTGGGAGACCTTGTTACAATATGCAGCCTCCTAGTCTCTATGAAACTTTGATTGTTTCATCTAAAATGCCATGGAGAAGTTGTTCTTGATTGATGTTAATGAGATAAAATGAGGTGAAAAAATCTTAGTTTATGTGCAGTTTTTGCCCAAGTTAGATGGAATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGGGAGGAGATCCATAGCAAAAGGCAGATGGTTCAGTACCTGAAATCACACCCTGGTAATCCAGCATCTTCTCAGTTTTATTGGGGTACTGGTGAATCACCTAGAAGATCAGCTAGAATTAGTGAGAAGGCCAAGGCAGCTCCCACGCCTCAAATTGAATGGCCTAAGAAACGAACACGGAGACGAACGCTTTCGAAAAAGGATGTTGAAGAGGTAGTTGTTGTCCTAGCCGGTTCTGAGCAAGCAGGAGTTCACAAGCAAGAAGCCGATGAAGACGAGACCGATGTCGATGGCAAGCTAAAAGACATTGCTGAAACGGAGCAGGGAAGCATAAAAGGGAACAAGGAAATGGAGGGTCCTGAAGATGCAACAAAGGAAAATCAAAGTTTGGAGGGAACTAAAGGCGAAGAAAAGGTGCAACTTCAAGATGATGCAAGGGAAACCAATGAATCAGACGACAAGGAATCCATTTCTGGGGAAAGAGAATTTGACAATGCAAAGGAAGCCACTGATCCAGGGGATAAGGCAACCATTTCAGAAGAAACAACAGTTGAACTGCAAGGAAACGAACAAGATGAACTTAACCAAAGTTCTACAAAATCAGAAGGAATCAAGGTGGAAGAAGAAGTAGCAAAAGAGACCAAAGAGGAACATGATGAAAAGCTAGAAAGTTTACAGAATTGGGAGCACTAA

mRNA sequence

ATGCAAACTCATTGCACAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGCCATGCCACCATCGACCTCCGACTACCGGCTGCCACTATCGTCGTCGACCGAAACTTGTTCCTTTTTTTTCTTATTTTCAACAACTGCCACCACGCGTCGACGATTTTTCCAGCATTCGCCGCTGACTGTCTGCATTCGCTCAGTGGTCGAAGGGCTTCTGTGTTAGAATTTAAAGCTCCACTACACTTGTATAGAGATGGAATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGGGAGGAGATCCATAGCAAAAGGCAGATGGTTCAGTACCTGAAATCACACCCTGGTAATCCAGCATCTTCTCAGTTTTATTGGGGTACTGGTGAATCACCTAGAAGATCAGCTAGAATTAGTGAGAAGGCCAAGGCAGCTCCCACGCCTCAAATTGAATGGCCTAAGAAACGAACACGGAGACGAACGCTTTCGAAAAAGGATGTTGAAGAGGTAGTTGTTGTCCTAGCCGGTTCTGAGCAAGCAGGAGTTCACAAGCAAGAAGCCGATGAAGACGAGACCGATGTCGATGGCAAGCTAAAAGACATTGCTGAAACGGAGCAGGGAAGCATAAAAGGGAACAAGGAAATGGAGGGTCCTGAAGATGCAACAAAGGAAAATCAAAGTTTGGAGGGAACTAAAGGCGAAGAAAAGGTGCAACTTCAAGATGATGCAAGGGAAACCAATGAATCAGACGACAAGGAATCCATTTCTGGGGAAAGAGAATTTGACAATGCAAAGGAAGCCACTGATCCAGGGGATAAGGCAACCATTTCAGAAGAAACAACAGTTGAACTGCAAGGAAACGAACAAGATGAACTTAACCAAAGTTCTACAAAATCAGAAGGAATCAAGGTGGAAGAAGAAGTAGCAAAAGAGACCAAAGAGGAACATGATGAAAAGCTAGAAAGTTTACAGAATTGGGAGCACTAA

Coding sequence (CDS)

ATGCAAACTCATTGCACAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGCCATGCCACCATCGACCTCCGACTACCGGCTGCCACTATCGTCGTCGACCGAAACTTGTTCCTTTTTTTTCTTATTTTCAACAACTGCCACCACGCGTCGACGATTTTTCCAGCATTCGCCGCTGACTGTCTGCATTCGCTCAGTGGTCGAAGGGCTTCTGTGTTAGAATTTAAAGCTCCACTACACTTGTATAGAGATGGAATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGGGAGGAGATCCATAGCAAAAGGCAGATGGTTCAGTACCTGAAATCACACCCTGGTAATCCAGCATCTTCTCAGTTTTATTGGGGTACTGGTGAATCACCTAGAAGATCAGCTAGAATTAGTGAGAAGGCCAAGGCAGCTCCCACGCCTCAAATTGAATGGCCTAAGAAACGAACACGGAGACGAACGCTTTCGAAAAAGGATGTTGAAGAGGTAGTTGTTGTCCTAGCCGGTTCTGAGCAAGCAGGAGTTCACAAGCAAGAAGCCGATGAAGACGAGACCGATGTCGATGGCAAGCTAAAAGACATTGCTGAAACGGAGCAGGGAAGCATAAAAGGGAACAAGGAAATGGAGGGTCCTGAAGATGCAACAAAGGAAAATCAAAGTTTGGAGGGAACTAAAGGCGAAGAAAAGGTGCAACTTCAAGATGATGCAAGGGAAACCAATGAATCAGACGACAAGGAATCCATTTCTGGGGAAAGAGAATTTGACAATGCAAAGGAAGCCACTGATCCAGGGGATAAGGCAACCATTTCAGAAGAAACAACAGTTGAACTGCAAGGAAACGAACAAGATGAACTTAACCAAAGTTCTACAAAATCAGAAGGAATCAAGGTGGAAGAAGAAGTAGCAAAAGAGACCAAAGAGGAACATGATGAAAAGCTAGAAAGTTTACAGAATTGGGAGCACTAA

Protein sequence

MQTHCTGYPHSHVSYTNALDRSVCIKYKVGHATIDLRLPAATIVVDRNLFLFFLIFNNCHHASTIFPAFAADCLHSLSGRRASVLEFKAPLHLYRDGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAKAAPTPQIEWPKKRTRRRTLSKKDVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDIAETEQGSIKGNKEMEGPEDATKENQSLEGTKGEEKVQLQDDARETNESDDKESISGEREFDNAKEATDPGDKATISEETTVELQGNEQDELNQSSTKSEGIKVEEEVAKETKEEHDEKLESLQNWEH
Homology
BLAST of Lag0034319 vs. NCBI nr
Match: XP_022144823.1 (methyl-CpG-binding domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 263.1 bits (671), Expect = 3.4e-66
Identity = 165/282 (58.51%), Postives = 202/282 (71.63%), Query Frame = 0

Query: 96  DGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAK 155
           DGITKK EIIF+APTGEEI+ KRQ+ QYLKSHPGNPASS+F WGTGE+PR+SARISE+ K
Sbjct: 50  DGITKKKEIIFLAPTGEEINGKRQLHQYLKSHPGNPASSEFDWGTGETPRKSARISERVK 109

Query: 156 AAPTPQIEWPKKRTRRRTLSKKDVEEVVVVLAGSEQA-GVHKQEADEDETDV-DGK---- 215
           AAP P+IEWPKKRTR+  +SKKD +E  VVL GSE+A  VHKQ+AD+ E+ V DGK    
Sbjct: 110 AAPLPRIEWPKKRTRKLAVSKKDDKEADVVLDGSEEARAVHKQDADKYESGVTDGKGNQE 169

Query: 216 -----------------------------------LKDIAETEQGSIKGNKEMEGPEDAT 275
                                               ++ AE E GS +GNKE EG EDAT
Sbjct: 170 NRTLQDEDVETAPAPAPVLASSEPAEEGQQLDGEECENPAEIEWGSAEGNKETEGSEDAT 229

Query: 276 KENQSLEGTKGEEKVQLQDDARETNESDDKESISGEREFDNAKEATDPGDKATISEET-- 335
           K +++L+GTKGEEKVQLQDDA+ET ES+DKESI GE+EF+NAK+AT PGDKA I +ET  
Sbjct: 230 KGSRNLDGTKGEEKVQLQDDAKETIESEDKESILGEKEFENAKQATSPGDKAAICKETMV 289

BLAST of Lag0034319 vs. NCBI nr
Match: XP_038880161.1 (methyl-CpG-binding domain-containing protein 11-like isoform X2 [Benincasa hispida])

HSP 1 Score: 203.0 bits (515), Expect = 4.2e-48
Identity = 142/254 (55.91%), Postives = 158/254 (62.20%), Query Frame = 0

Query: 96  DGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAK 155
           DGITKKNEIIFIAPTGEEIHSKRQ+ QYLKSHPGNPASS+F WGTGE+PRRSARISEKAK
Sbjct: 34  DGITKKNEIIFIAPTGEEIHSKRQLDQYLKSHPGNPASSEFDWGTGETPRRSARISEKAK 93

Query: 156 AA-PTPQIEWPKKRTRRRTLSKK-DVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDI 215
           AA P+PQIE PKKRTR++ LS+K D +E  VV  G E+ GVHK    E+ET+VDGK+K I
Sbjct: 94  AAPPSPQIERPKKRTRKQPLSRKDDNKEADVVPDGFEEKGVHK----ENETEVDGKVKKI 153

Query: 216 ------------------------------------------AETEQGSIKGNKEMEGPE 275
                                                     AETEQ S       EG E
Sbjct: 154 YVEGNDENSKLKEENVKDETIPTPIEVAEEGRGIDGDECEKLAETEQAS-------EGSE 213

Query: 276 DATKENQSLEGTKGEEKVQLQDDARETNESDDKESISGEREFDNAKEATDPGDKATISEE 306
           +A KENQSLEGTKGEE+VQLQDDA        KESIS           T   DKA I EE
Sbjct: 214 NARKENQSLEGTKGEEEVQLQDDA--------KESIS-----------TCSKDKAAIPEE 257

BLAST of Lag0034319 vs. NCBI nr
Match: XP_038880160.1 (methyl-CpG-binding domain-containing protein 11-like isoform X1 [Benincasa hispida])

HSP 1 Score: 203.0 bits (515), Expect = 4.2e-48
Identity = 142/254 (55.91%), Postives = 158/254 (62.20%), Query Frame = 0

Query: 96  DGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAK 155
           DGITKKNEIIFIAPTGEEIHSKRQ+ QYLKSHPGNPASS+F WGTGE+PRRSARISEKAK
Sbjct: 70  DGITKKNEIIFIAPTGEEIHSKRQLDQYLKSHPGNPASSEFDWGTGETPRRSARISEKAK 129

Query: 156 AA-PTPQIEWPKKRTRRRTLSKK-DVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDI 215
           AA P+PQIE PKKRTR++ LS+K D +E  VV  G E+ GVHK    E+ET+VDGK+K I
Sbjct: 130 AAPPSPQIERPKKRTRKQPLSRKDDNKEADVVPDGFEEKGVHK----ENETEVDGKVKKI 189

Query: 216 ------------------------------------------AETEQGSIKGNKEMEGPE 275
                                                     AETEQ S       EG E
Sbjct: 190 YVEGNDENSKLKEENVKDETIPTPIEVAEEGRGIDGDECEKLAETEQAS-------EGSE 249

Query: 276 DATKENQSLEGTKGEEKVQLQDDARETNESDDKESISGEREFDNAKEATDPGDKATISEE 306
           +A KENQSLEGTKGEE+VQLQDDA        KESIS           T   DKA I EE
Sbjct: 250 NARKENQSLEGTKGEEEVQLQDDA--------KESIS-----------TCSKDKAAIPEE 293

BLAST of Lag0034319 vs. NCBI nr
Match: XP_004150031.1 (methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8653112.1 hypothetical protein Csa_019891 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 5.8e-42
Identity = 125/247 (50.61%), Postives = 147/247 (59.51%), Query Frame = 0

Query: 96  DGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAK 155
           DGITKKNEIIFIAPTGE IH+KRQ+ QYLKSHPGNPASS+F W TGE+PRRSARISEKAK
Sbjct: 34  DGITKKNEIIFIAPTGEAIHNKRQLDQYLKSHPGNPASSEFDWRTGETPRRSARISEKAK 93

Query: 156 AA-PTPQIEWPKKRTRRRTLSKK-DVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDI 215
           A  P+PQIE  KKRTR++ LSKK +V+E VVV  G E+ GVHK    EDET+VD ++K+I
Sbjct: 94  ATPPSPQIERRKKRTRKQALSKKVEVKETVVVPYGLEEVGVHK----EDETNVDSEVKEI 153

Query: 216 AETE-----------------------------------QGSIKGNKEMEGPEDATKENQ 275
            E E                                   +   K  +  EG EDA KENQ
Sbjct: 154 HEEEKYENRKLEDENGKAETTPTPAEMAEEGWRIDGDEWEKLAKTKQGSEGSEDARKENQ 213

Query: 276 SLEGTKGEEKVQLQDDARETNESDDKESISGEREFDNAKEATDPGDKATISEETTVELQG 306
           +LEGT GEEKVQLQ+DA+E                             +ISEE T E+Q 
Sbjct: 214 NLEGTNGEEKVQLQNDAKE-----------------------------SISEEITAEVQR 247

BLAST of Lag0034319 vs. NCBI nr
Match: XP_008443980.1 (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >XP_008443981.1 PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >KAA0050154.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa] >TYK06410.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 2.1e-36
Identity = 108/188 (57.45%), Postives = 125/188 (66.49%), Query Frame = 0

Query: 96  DGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAK 155
           DGITKKNEIIFIAPTGEEIH+KRQ+ QYLKSHPGN ASS+F WGTGE+PRRSARISEKAK
Sbjct: 34  DGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNLASSEFDWGTGETPRRSARISEKAK 93

Query: 156 AA-PTPQIEWPKKRTRRRTLSKK-DVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDI 215
           A  P+P IE PKKRTR++ L KK + +E VVV  G E+AGVHK    EDET+VD ++K+I
Sbjct: 94  ATPPSPHIERPKKRTRKQALLKKFEDKETVVVPDGFEEAGVHK----EDETNVDSEVKEI 153

Query: 216 -----------------AET--------EQGS----------IKGNKEMEGPEDATKENQ 247
                            AET        E+G            K  +  EG EDA KENQ
Sbjct: 154 QVEGKYENRKLEDEKLKAETTPTPAEMAEEGRQSDDDECKKLAKTKQGSEGSEDARKENQ 213

BLAST of Lag0034319 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20
Identity = 100/246 (40.65%), Postives = 133/246 (54.07%), Query Frame = 0

Query: 95  RDGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKA 154
           R G  +K EI+F+APTGEEI S++Q+ QYLK+HPGNP  S+F W TGE+PRRS+RIS+K 
Sbjct: 26  RAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEFEWTTGETPRRSSRISQKV 85

Query: 155 KA-APTPQIEWPKKRTRRRTLSKKDVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDI 214
           KA  PTP  E P  + RR +L+KKD +E       +E+A V K+  D D+   DGK    
Sbjct: 86  KATTPTPDKE-PLLKKRRSSLTKKDNKEAA---EKNEEAAV-KENMDVDK---DGK---- 145

Query: 215 AETEQGSIKGNKEMEG-PEDATKENQSLEGTKGE-EKVQLQDDARETNESDDKESISGER 274
             TE    +  KE EG  E A  E ++ EG K E EKV  + +  E  +    E    E+
Sbjct: 146 --TENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQTEIAEAEK 205

Query: 275 EFDNA------KEATDPGDKATISEETTVELQGNE-QDELNQSSTKSEGIK-VEEEVAKE 330
           E +        KEA    DK    E  T EL+      E  +  +K EG+K  E + A+E
Sbjct: 206 EKEGEKAEAENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDTEMKEAQE 257

BLAST of Lag0034319 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-19
Identity = 87/233 (37.34%), Postives = 129/233 (55.36%), Query Frame = 0

Query: 97  GITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAKA 156
           G  KK E++F+APTGEEI +++Q+ QYLKSHPGNPA ++F W T  +PRRSARISEK KA
Sbjct: 28  GSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKA 87

Query: 157 APTPQIEWPKKRTRRRT-LSKKDVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDIAE 216
            P+P  E PKKR R ++ +SKKD E       G +  G  ++ +   +T+++   + IAE
Sbjct: 88  TPSPDKEPPKKRGRTKSPVSKKDAE-------GEKSEGGGEENSHVKDTEMNPP-EGIAE 147

Query: 217 TEQGSIK-GNKEMEGPEDATKENQSLEGTKGEEKVQLQDDARETNESDDKESISGEREFD 276
            E  + K G+ E E   DA KEN   E T     VQ + ++ +    D  +  S  +E D
Sbjct: 148 NENVTDKNGSGETERVNDA-KENIVAEETPNAAPVQEEGESMKEKALDSVDDKS--KETD 207

Query: 277 NAKEATDPGDKATISEETTVELQGNEQD-ELNQSSTKSEGIKVEEEVAKETKE 327
             K+       +   E+ TVE    +++ E    + +  G+  E E  ++T E
Sbjct: 208 KEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAE 249

BLAST of Lag0034319 vs. ExPASy TrEMBL
Match: A0A6J1CUB2 (methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111014413 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.6e-66
Identity = 165/282 (58.51%), Postives = 202/282 (71.63%), Query Frame = 0

Query: 96  DGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAK 155
           DGITKK EIIF+APTGEEI+ KRQ+ QYLKSHPGNPASS+F WGTGE+PR+SARISE+ K
Sbjct: 50  DGITKKKEIIFLAPTGEEINGKRQLHQYLKSHPGNPASSEFDWGTGETPRKSARISERVK 109

Query: 156 AAPTPQIEWPKKRTRRRTLSKKDVEEVVVVLAGSEQA-GVHKQEADEDETDV-DGK---- 215
           AAP P+IEWPKKRTR+  +SKKD +E  VVL GSE+A  VHKQ+AD+ E+ V DGK    
Sbjct: 110 AAPLPRIEWPKKRTRKLAVSKKDDKEADVVLDGSEEARAVHKQDADKYESGVTDGKGNQE 169

Query: 216 -----------------------------------LKDIAETEQGSIKGNKEMEGPEDAT 275
                                               ++ AE E GS +GNKE EG EDAT
Sbjct: 170 NRTLQDEDVETAPAPAPVLASSEPAEEGQQLDGEECENPAEIEWGSAEGNKETEGSEDAT 229

Query: 276 KENQSLEGTKGEEKVQLQDDARETNESDDKESISGEREFDNAKEATDPGDKATISEET-- 335
           K +++L+GTKGEEKVQLQDDA+ET ES+DKESI GE+EF+NAK+AT PGDKA I +ET  
Sbjct: 230 KGSRNLDGTKGEEKVQLQDDAKETIESEDKESILGEKEFENAKQATSPGDKAAICKETMV 289

BLAST of Lag0034319 vs. ExPASy TrEMBL
Match: A0A1S3B9A2 (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103487437 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-36
Identity = 108/188 (57.45%), Postives = 125/188 (66.49%), Query Frame = 0

Query: 96  DGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAK 155
           DGITKKNEIIFIAPTGEEIH+KRQ+ QYLKSHPGN ASS+F WGTGE+PRRSARISEKAK
Sbjct: 34  DGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNLASSEFDWGTGETPRRSARISEKAK 93

Query: 156 AA-PTPQIEWPKKRTRRRTLSKK-DVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDI 215
           A  P+P IE PKKRTR++ L KK + +E VVV  G E+AGVHK    EDET+VD ++K+I
Sbjct: 94  ATPPSPHIERPKKRTRKQALLKKFEDKETVVVPDGFEEAGVHK----EDETNVDSEVKEI 153

Query: 216 -----------------AET--------EQGS----------IKGNKEMEGPEDATKENQ 247
                            AET        E+G            K  +  EG EDA KENQ
Sbjct: 154 QVEGKYENRKLEDEKLKAETTPTPAEMAEEGRQSDDDECKKLAKTKQGSEGSEDARKENQ 213

BLAST of Lag0034319 vs. ExPASy TrEMBL
Match: A0A5A7U4J5 (Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001110 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-36
Identity = 108/188 (57.45%), Postives = 125/188 (66.49%), Query Frame = 0

Query: 96  DGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAK 155
           DGITKKNEIIFIAPTGEEIH+KRQ+ QYLKSHPGN ASS+F WGTGE+PRRSARISEKAK
Sbjct: 34  DGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNLASSEFDWGTGETPRRSARISEKAK 93

Query: 156 AA-PTPQIEWPKKRTRRRTLSKK-DVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDI 215
           A  P+P IE PKKRTR++ L KK + +E VVV  G E+AGVHK    EDET+VD ++K+I
Sbjct: 94  ATPPSPHIERPKKRTRKQALLKKFEDKETVVVPDGFEEAGVHK----EDETNVDSEVKEI 153

Query: 216 -----------------AET--------EQGS----------IKGNKEMEGPEDATKENQ 247
                            AET        E+G            K  +  EG EDA KENQ
Sbjct: 154 QVEGKYENRKLEDEKLKAETTPTPAEMAEEGRQSDDDECKKLAKTKQGSEGSEDARKENQ 213

BLAST of Lag0034319 vs. ExPASy TrEMBL
Match: A5AE76 (MBD domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_001419 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.7e-28
Identity = 111/292 (38.01%), Postives = 156/292 (53.42%), Query Frame = 0

Query: 85  LEFKAPLHLYRDG----------------ITKKNEIIFIAPTGEEIHSKRQMVQYLKSHP 144
           + FK PL L   G                  KKNEIIF +PTGEEI+SKRQ+ QYLKSHP
Sbjct: 355 ISFKVPLRLDSSGKGMGEGLWEFMPKRGLTPKKNEIIFTSPTGEEINSKRQLEQYLKSHP 414

Query: 145 GNPASSQFYWGTGESPRRSARISEKAKAAPTPQIEWPKKRTRRRTLSKKDVEEVVVVLAG 204
           G PA  +F WGTGE+PRRSARISEKAKA P  ++E  KKR+R+ + SKKD +E   +   
Sbjct: 415 GGPAIQEFDWGTGETPRRSARISEKAKATPPRELEPAKKRSRKSSASKKDNKETETIPDE 474

Query: 205 SEQAGVHKQEADEDETDVDGKL-KDIAETEQGSIKGNKEMEGPEDATKENQSLEGTKGEE 264
           +E   VH QEA + E + + ++ KD+    +  I+   + E     T+E    EGT+ E+
Sbjct: 475 TETKEVHMQEAKKTEDNAEAEIQKDV--VNENLIETKDKAEDVNTKTEE-APXEGTQVEQ 534

Query: 265 KVQLQDDARETNES----------------DDKESISGEREFDNAKEATDPGDK------ 324
            V++ DDA E  ++                ++KES  G    +N  EA    DK      
Sbjct: 535 DVKIPDDAEEGKKNAEKEPGEKGGDSEVAQNEKESTEGTEVQENVDEALVKADKDDGPGE 594

Query: 325 -----ATISEETTVELQGNEQDELNQSSTKSEG-IKVEEEVAKETKEEHDEK 332
                A I++E   E++G E+++ N+S+ +SEG IK +E       E+H  K
Sbjct: 595 HDKPDAVIADEKKPEVEGVEKEKENRSALESEGEIKEKESANGNNVEQHSLK 643

BLAST of Lag0034319 vs. ExPASy TrEMBL
Match: A0A438C0I1 (Methyl-CpG-binding domain-containing protein 10 OS=Vitis vinifera OX=29760 GN=MBD10 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-27
Identity = 107/265 (40.38%), Postives = 152/265 (57.36%), Query Frame = 0

Query: 97  GIT-KKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAK 156
           G+T KKNEIIF +PTGEEI+SKRQ+ QYLKSHPG PA  +F WGTGE+PRRSARISEKAK
Sbjct: 28  GLTPKKNEIIFTSPTGEEINSKRQLEQYLKSHPGGPAIQEFDWGTGETPRRSARISEKAK 87

Query: 157 AAPTPQIEWPKKRTRRRTLSKKDVEEVVVVLAGSEQAGVHKQEADEDETDVDGKL-KDIA 216
           A P  ++E  KKR+R+ + SKKD +E   +   +E   VH QEA + E + + ++ KD+ 
Sbjct: 88  ATPPRELEPAKKRSRKSSASKKDNKETETIPDETETKEVHMQEAKKTEDNAEAEIQKDV- 147

Query: 217 ETEQGSIKGNKEMEGPEDATKENQSLEGTKGEEKVQLQDDARETNES------------- 276
              +  I+   + E     T+E    EGT+ E+ V++ DDA E  ++             
Sbjct: 148 -VNENLIETKDKAEDVNTKTEEAPP-EGTQVEQDVKIPDDAEEGKKNAEKEPGEKGGDSE 207

Query: 277 ---DDKESISGEREFDNAKEATDPGDK-----------ATISEETTVELQGNEQDELNQS 332
              ++KES  G    +N  EA    DK           A I++E   E++G E+++ N+S
Sbjct: 208 VAQNEKESTEGTEVQENVDEALVKADKDDGPGEHDKPDAVIADEKKPEVEGVEKEKENRS 267

BLAST of Lag0034319 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 )

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-21
Identity = 100/246 (40.65%), Postives = 133/246 (54.07%), Query Frame = 0

Query: 95  RDGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKA 154
           R G  +K EI+F+APTGEEI S++Q+ QYLK+HPGNP  S+F W TGE+PRRS+RIS+K 
Sbjct: 26  RAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEFEWTTGETPRRSSRISQKV 85

Query: 155 KA-APTPQIEWPKKRTRRRTLSKKDVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDI 214
           KA  PTP  E P  + RR +L+KKD +E       +E+A V K+  D D+   DGK    
Sbjct: 86  KATTPTPDKE-PLLKKRRSSLTKKDNKEAA---EKNEEAAV-KENMDVDK---DGK---- 145

Query: 215 AETEQGSIKGNKEMEG-PEDATKENQSLEGTKGE-EKVQLQDDARETNESDDKESISGER 274
             TE    +  KE EG  E A  E ++ EG K E EKV  + +  E  +    E    E+
Sbjct: 146 --TENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQTEIAEAEK 205

Query: 275 EFDNA------KEATDPGDKATISEETTVELQGNE-QDELNQSSTKSEGIK-VEEEVAKE 330
           E +        KEA    DK    E  T EL+      E  +  +K EG+K  E + A+E
Sbjct: 206 EKEGEKAEAENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDTEMKEAQE 257

BLAST of Lag0034319 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 )

HSP 1 Score: 99.0 bits (245), Expect = 7.9e-21
Identity = 87/233 (37.34%), Postives = 129/233 (55.36%), Query Frame = 0

Query: 97  GITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAKA 156
           G  KK E++F+APTGEEI +++Q+ QYLKSHPGNPA ++F W T  +PRRSARISEK KA
Sbjct: 28  GSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKA 87

Query: 157 APTPQIEWPKKRTRRRT-LSKKDVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDIAE 216
            P+P  E PKKR R ++ +SKKD E       G +  G  ++ +   +T+++   + IAE
Sbjct: 88  TPSPDKEPPKKRGRTKSPVSKKDAE-------GEKSEGGGEENSHVKDTEMNPP-EGIAE 147

Query: 217 TEQGSIK-GNKEMEGPEDATKENQSLEGTKGEEKVQLQDDARETNESDDKESISGEREFD 276
            E  + K G+ E E   DA KEN   E T     VQ + ++ +    D  +  S  +E D
Sbjct: 148 NENVTDKNGSGETERVNDA-KENIVAEETPNAAPVQEEGESMKEKALDSVDDKS--KETD 207

Query: 277 NAKEATDPGDKATISEETTVELQGNEQD-ELNQSSTKSEGIKVEEEVAKETKE 327
             K+       +   E+ TVE    +++ E    + +  G+  E E  ++T E
Sbjct: 208 KEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAE 249

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022144823.13.4e-6658.51methyl-CpG-binding domain-containing protein 11-like [Momordica charantia][more]
XP_038880161.14.2e-4855.91methyl-CpG-binding domain-containing protein 11-like isoform X2 [Benincasa hispi... [more]
XP_038880160.14.2e-4855.91methyl-CpG-binding domain-containing protein 11-like isoform X1 [Benincasa hispi... [more]
XP_004150031.15.8e-4250.61methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8653112.1 ... [more]
XP_008443980.12.1e-3657.45PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >... [more]
Match NameE-valueIdentityDescription
Q9XI361.7e-2040.65Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LW001.1e-1937.34Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1CUB21.6e-6658.51methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3... [more]
A0A1S3B9A21.0e-3657.45methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=... [more]
A0A5A7U4J51.0e-3657.45Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa... [more]
A5AE766.7e-2838.01MBD domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_001419 PE=4 S... [more]
A0A438C0I11.5e-2740.38Methyl-CpG-binding domain-containing protein 10 OS=Vitis vinifera OX=29760 GN=MB... [more]
Match NameE-valueIdentityDescription
AT1G15340.11.2e-2140.65methyl-CPG-binding domain 10 [more]
AT3G15790.17.9e-2137.34methyl-CPG-binding domain 11 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 321..340
NoneNo IPR availableGENE3D3.30.890.10coord: 93..177
e-value: 3.2E-6
score: 29.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..340
NoneNo IPR availablePANTHERPTHR33729:SF6METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKEcoord: 95..331
IPR001739Methyl-CpG DNA bindingPFAMPF01429MBDcoord: 100..140
e-value: 5.1E-6
score: 26.1
IPR039622Methyl-CpG-binding domain-containing protein 10/11PANTHERPTHR33729METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 95..331
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 99..160

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0034319.1Lag0034319.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding