Lag0034319 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAACTCATTGCACAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGCCGTATCCATAGTGTCACCAGGATAAGGCACCCAGTCTTATCCCTATACTATAAACCCTTTAGGTTGTTTCTTGAACAATGATCCCATATGTCGCTACATATAGTTCAAGACTCATATTACAACCTTGGATGTCTAGTTTATTGGATTAGGGTTATTATTAGGCAAAGACAAATATAAAATAACTAATAACAATTAATGGAAAAATATATCAATATTATTTCATTAATATCCGGTCAACGGTTACATTCACTATCTACGAGTTTTAGGGCATAAAACCCAACACGGTCGTGGTCGACCTTCGCTGATCGGCCTTCGCCGACTGACCCCCACCGACCTTCGTTGACCAGTTGCTACAGTTGACCTCTGACTACCAGATGCCACCATCGACCTCCGACTACCGGCTGCCACTATCGTCGTCGACCGAAACTTGTTCCTTTTTTTTCTTATTTTCAACAACTGCCACCACGCGTCGACGATTTTTCCAGCATTCGCCGCTGACTGTCTGCATTCGCTCAGTGGTCGAAGGTCAGTAGCGATGACCGATGATCAACGTTGGCGGGTGATCGGTAACAATGGTGGTAGTGATGAGGAAGAAGAAGAAGAAATAAAAAAATAATAGTAGAAAATTAATATATTTTTATATTATATGTACTAAATTTTATTTTAACTAAAAAAACAAGAAACAAGAATCGGTTATCAAACACATTTTGTGTTTCTGTTTCTTTTTTCAGAGAAACAAGGAACAAAAATAGTTATCAAACATGTTTCTGTTTCTACTTCTTAAAAAACAAGAAACAAGAAACAAGAAACCAGAAACCAGAAATAGGAAACGAGAACGTTATCAAACGGGGCCGTACTTGCCTGCTCCTCCTGGTTGGAAGAAAAAGGTTTCCTCCATTTCTTCCTGTTTTTAATCTTTCTGATTACCAGTGTGTTAGTTTTAGGATTGCCCATTTGCCCATTTTGTTGCGCTGTGAATTTGCAGGGCTTCTGTGTTAGAATTTAAAGCTCCACTACACTTGTATAGAGGTTAGGGCTAATGGACATCCTTGGAATTAAGCTCTGTTCAATTCTGGATTCATATGCTTTTGGGTTTTCTAGAAACTGTCTTTTTGTTCAATTGTTTTGAATTTAATGTTAGGTACTCATTAGCAAAAGTGGGTGTTGGTTCTGTCTCTGAATCTTCTTTATCATCATCTCTATTTTCCTAGTTTTGTTTATGTTTACTTTTTCTCTCTTTTGAGTGAATGGTTCTTTCTAATTGGGAGTGGGAGACCTTGTTACAATATGCAGCCTCCTAGTCTCTATGAAACTTTGATTGTTTCATCTAAAATGCCATGGAGAAGTTGTTCTTGATTGATGTTAATGAGATAAAATGAGGTGAAAAAATCTTAGTTTATGTGCAGTTTTTGCCCAAGTTAGATGGAATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGGGAGGAGATCCATAGCAAAAGGCAGATGGTTCAGTACCTGAAATCACACCCTGGTAATCCAGCATCTTCTCAGTTTTATTGGGGTACTGGTGAATCACCTAGAAGATCAGCTAGAATTAGTGAGAAGGCCAAGGCAGCTCCCACGCCTCAAATTGAATGGCCTAAGAAACGAACACGGAGACGAACGCTTTCGAAAAAGGATGTTGAAGAGGTAGTTGTTGTCCTAGCCGGTTCTGAGCAAGCAGGAGTTCACAAGCAAGAAGCCGATGAAGACGAGACCGATGTCGATGGCAAGCTAAAAGACATTGCTGAAACGGAGCAGGGAAGCATAAAAGGGAACAAGGAAATGGAGGGTCCTGAAGATGCAACAAAGGAAAATCAAAGTTTGGAGGGAACTAAAGGCGAAGAAAAGGTGCAACTTCAAGATGATGCAAGGGAAACCAATGAATCAGACGACAAGGAATCCATTTCTGGGGAAAGAGAATTTGACAATGCAAAGGAAGCCACTGATCCAGGGGATAAGGCAACCATTTCAGAAGAAACAACAGTTGAACTGCAAGGAAACGAACAAGATGAACTTAACCAAAGTTCTACAAAATCAGAAGGAATCAAGGTGGAAGAAGAAGTAGCAAAAGAGACCAAAGAGGAACATGATGAAAAGCTAGAAAGTTTACAGAATTGGGAGCACTAA ATGCAAACTCATTGCACAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGCCATGCCACCATCGACCTCCGACTACCGGCTGCCACTATCGTCGTCGACCGAAACTTGTTCCTTTTTTTTCTTATTTTCAACAACTGCCACCACGCGTCGACGATTTTTCCAGCATTCGCCGCTGACTGTCTGCATTCGCTCAGTGGTCGAAGGGCTTCTGTGTTAGAATTTAAAGCTCCACTACACTTGTATAGAGATGGAATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGGGAGGAGATCCATAGCAAAAGGCAGATGGTTCAGTACCTGAAATCACACCCTGGTAATCCAGCATCTTCTCAGTTTTATTGGGGTACTGGTGAATCACCTAGAAGATCAGCTAGAATTAGTGAGAAGGCCAAGGCAGCTCCCACGCCTCAAATTGAATGGCCTAAGAAACGAACACGGAGACGAACGCTTTCGAAAAAGGATGTTGAAGAGGTAGTTGTTGTCCTAGCCGGTTCTGAGCAAGCAGGAGTTCACAAGCAAGAAGCCGATGAAGACGAGACCGATGTCGATGGCAAGCTAAAAGACATTGCTGAAACGGAGCAGGGAAGCATAAAAGGGAACAAGGAAATGGAGGGTCCTGAAGATGCAACAAAGGAAAATCAAAGTTTGGAGGGAACTAAAGGCGAAGAAAAGGTGCAACTTCAAGATGATGCAAGGGAAACCAATGAATCAGACGACAAGGAATCCATTTCTGGGGAAAGAGAATTTGACAATGCAAAGGAAGCCACTGATCCAGGGGATAAGGCAACCATTTCAGAAGAAACAACAGTTGAACTGCAAGGAAACGAACAAGATGAACTTAACCAAAGTTCTACAAAATCAGAAGGAATCAAGGTGGAAGAAGAAGTAGCAAAAGAGACCAAAGAGGAACATGATGAAAAGCTAGAAAGTTTACAGAATTGGGAGCACTAA ATGCAAACTCATTGCACAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGCCATGCCACCATCGACCTCCGACTACCGGCTGCCACTATCGTCGTCGACCGAAACTTGTTCCTTTTTTTTCTTATTTTCAACAACTGCCACCACGCGTCGACGATTTTTCCAGCATTCGCCGCTGACTGTCTGCATTCGCTCAGTGGTCGAAGGGCTTCTGTGTTAGAATTTAAAGCTCCACTACACTTGTATAGAGATGGAATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGGGAGGAGATCCATAGCAAAAGGCAGATGGTTCAGTACCTGAAATCACACCCTGGTAATCCAGCATCTTCTCAGTTTTATTGGGGTACTGGTGAATCACCTAGAAGATCAGCTAGAATTAGTGAGAAGGCCAAGGCAGCTCCCACGCCTCAAATTGAATGGCCTAAGAAACGAACACGGAGACGAACGCTTTCGAAAAAGGATGTTGAAGAGGTAGTTGTTGTCCTAGCCGGTTCTGAGCAAGCAGGAGTTCACAAGCAAGAAGCCGATGAAGACGAGACCGATGTCGATGGCAAGCTAAAAGACATTGCTGAAACGGAGCAGGGAAGCATAAAAGGGAACAAGGAAATGGAGGGTCCTGAAGATGCAACAAAGGAAAATCAAAGTTTGGAGGGAACTAAAGGCGAAGAAAAGGTGCAACTTCAAGATGATGCAAGGGAAACCAATGAATCAGACGACAAGGAATCCATTTCTGGGGAAAGAGAATTTGACAATGCAAAGGAAGCCACTGATCCAGGGGATAAGGCAACCATTTCAGAAGAAACAACAGTTGAACTGCAAGGAAACGAACAAGATGAACTTAACCAAAGTTCTACAAAATCAGAAGGAATCAAGGTGGAAGAAGAAGTAGCAAAAGAGACCAAAGAGGAACATGATGAAAAGCTAGAAAGTTTACAGAATTGGGAGCACTAA MQTHCTGYPHSHVSYTNALDRSVCIKYKVGHATIDLRLPAATIVVDRNLFLFFLIFNNCHHASTIFPAFAADCLHSLSGRRASVLEFKAPLHLYRDGITKKNEIIFIAPTGEEIHSKRQMVQYLKSHPGNPASSQFYWGTGESPRRSARISEKAKAAPTPQIEWPKKRTRRRTLSKKDVEEVVVVLAGSEQAGVHKQEADEDETDVDGKLKDIAETEQGSIKGNKEMEGPEDATKENQSLEGTKGEEKVQLQDDARETNESDDKESISGEREFDNAKEATDPGDKATISEETTVELQGNEQDELNQSSTKSEGIKVEEEVAKETKEEHDEKLESLQNWEH Homology
BLAST of Lag0034319 vs. NCBI nr
Match: XP_022144823.1 (methyl-CpG-binding domain-containing protein 11-like [Momordica charantia]) HSP 1 Score: 263.1 bits (671), Expect = 3.4e-66 Identity = 165/282 (58.51%), Postives = 202/282 (71.63%), Query Frame = 0
BLAST of Lag0034319 vs. NCBI nr
Match: XP_038880161.1 (methyl-CpG-binding domain-containing protein 11-like isoform X2 [Benincasa hispida]) HSP 1 Score: 203.0 bits (515), Expect = 4.2e-48 Identity = 142/254 (55.91%), Postives = 158/254 (62.20%), Query Frame = 0
BLAST of Lag0034319 vs. NCBI nr
Match: XP_038880160.1 (methyl-CpG-binding domain-containing protein 11-like isoform X1 [Benincasa hispida]) HSP 1 Score: 203.0 bits (515), Expect = 4.2e-48 Identity = 142/254 (55.91%), Postives = 158/254 (62.20%), Query Frame = 0
BLAST of Lag0034319 vs. NCBI nr
Match: XP_004150031.1 (methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8653112.1 hypothetical protein Csa_019891 [Cucumis sativus]) HSP 1 Score: 182.6 bits (462), Expect = 5.8e-42 Identity = 125/247 (50.61%), Postives = 147/247 (59.51%), Query Frame = 0
BLAST of Lag0034319 vs. NCBI nr
Match: XP_008443980.1 (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >XP_008443981.1 PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >KAA0050154.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa] >TYK06410.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa]) HSP 1 Score: 164.1 bits (414), Expect = 2.1e-36 Identity = 108/188 (57.45%), Postives = 125/188 (66.49%), Query Frame = 0
BLAST of Lag0034319 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20 Identity = 100/246 (40.65%), Postives = 133/246 (54.07%), Query Frame = 0
BLAST of Lag0034319 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.1e-19 Identity = 87/233 (37.34%), Postives = 129/233 (55.36%), Query Frame = 0
BLAST of Lag0034319 vs. ExPASy TrEMBL
Match: A0A6J1CUB2 (methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111014413 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 1.6e-66 Identity = 165/282 (58.51%), Postives = 202/282 (71.63%), Query Frame = 0
BLAST of Lag0034319 vs. ExPASy TrEMBL
Match: A0A1S3B9A2 (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103487437 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.0e-36 Identity = 108/188 (57.45%), Postives = 125/188 (66.49%), Query Frame = 0
BLAST of Lag0034319 vs. ExPASy TrEMBL
Match: A0A5A7U4J5 (Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001110 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.0e-36 Identity = 108/188 (57.45%), Postives = 125/188 (66.49%), Query Frame = 0
BLAST of Lag0034319 vs. ExPASy TrEMBL
Match: A5AE76 (MBD domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_001419 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 6.7e-28 Identity = 111/292 (38.01%), Postives = 156/292 (53.42%), Query Frame = 0
BLAST of Lag0034319 vs. ExPASy TrEMBL
Match: A0A438C0I1 (Methyl-CpG-binding domain-containing protein 10 OS=Vitis vinifera OX=29760 GN=MBD10 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.5e-27 Identity = 107/265 (40.38%), Postives = 152/265 (57.36%), Query Frame = 0
BLAST of Lag0034319 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 ) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-21 Identity = 100/246 (40.65%), Postives = 133/246 (54.07%), Query Frame = 0
BLAST of Lag0034319 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 ) HSP 1 Score: 99.0 bits (245), Expect = 7.9e-21 Identity = 87/233 (37.34%), Postives = 129/233 (55.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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