Lag0034178 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAGAATTCCTTCCTGTGACAAGTTGAACCTCAAAAGGGACCTTTGGACTGCAGAGGAAGATGCAAGAATACTTGCATACGTATTGAAGCACGGGACGAGCAACTGGACCTCAACTCCAAAGAAAGCAGGTTAATACTTTAAACTTGTTATGATTTGGATGATTTTTATACATAGTTCTATTTGGAGTCTACATTGATGCTTATGGATTCTGTGTTTGAGATGTTTCATAGGACTAAGGAGACGTGGAAAGAGCTGCAGACTTAGATGGACCTTGAGGCCAGATTTTAAGCATCATAACTTCACATCCCAAGAGGAGGAATTGATTATCAGGCTTCATGAATGA ATGGCCAGAATTCCTTCCTGTGACAAGTTGAACCTCAAAAGGGACCTTTGGACTGCAGAGGAAGATGCAAGAATACTTGCATACGTATTGAAGCACGGGACGAGCAACTGGACCTCAACTCCAAAGAAAGCAGGACTAAGGAGACGTGGAAAGAGCTGCAGACTTAGATGGACCTTGAGGCCAGATTTTAAGCATCATAACTTCACATCCCAAGAGGAGGAATTGATTATCAGGCTTCATGAATGA ATGGCCAGAATTCCTTCCTGTGACAAGTTGAACCTCAAAAGGGACCTTTGGACTGCAGAGGAAGATGCAAGAATACTTGCATACGTATTGAAGCACGGGACGAGCAACTGGACCTCAACTCCAAAGAAAGCAGGACTAAGGAGACGTGGAAAGAGCTGCAGACTTAGATGGACCTTGAGGCCAGATTTTAAGCATCATAACTTCACATCCCAAGAGGAGGAATTGATTATCAGGCTTCATGAATGA MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWTLRPDFKHHNFTSQEEELIIRLHE Homology
BLAST of Lag0034178 vs. NCBI nr
Match: XP_011660334.2 (transcription factor MYB35 [Cucumis sativus] >KGN63635.1 hypothetical protein Csa_013697 [Cucumis sativus]) HSP 1 Score: 151.4 bits (381), Expect = 3.4e-33 Identity = 73/82 (89.02%), Postives = 74/82 (90.24%), Query Frame = 0
BLAST of Lag0034178 vs. NCBI nr
Match: KAA0057914.1 (transcription factor MYB35-like [Cucumis melo var. makuwa] >TYJ98602.1 transcription factor MYB35-like [Cucumis melo var. makuwa]) HSP 1 Score: 151.4 bits (381), Expect = 3.4e-33 Identity = 73/82 (89.02%), Postives = 74/82 (90.24%), Query Frame = 0
BLAST of Lag0034178 vs. NCBI nr
Match: XP_008453162.1 (PREDICTED: transcription factor MYB35-like [Cucumis melo]) HSP 1 Score: 151.4 bits (381), Expect = 3.4e-33 Identity = 73/82 (89.02%), Postives = 74/82 (90.24%), Query Frame = 0
BLAST of Lag0034178 vs. NCBI nr
Match: XP_022135353.1 (transcription factor MYB35-like [Momordica charantia]) HSP 1 Score: 149.1 bits (375), Expect = 1.7e-32 Identity = 70/82 (85.37%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of Lag0034178 vs. NCBI nr
Match: XP_022988389.1 (transcription factor MYB35-like [Cucurbita maxima]) HSP 1 Score: 147.9 bits (372), Expect = 3.8e-32 Identity = 71/82 (86.59%), Postives = 72/82 (87.80%), Query Frame = 0
BLAST of Lag0034178 vs. ExPASy Swiss-Prot
Match: Q9LSI7 (Transcription factor MYB35 OS=Arabidopsis thaliana OX=3702 GN=MYB35 PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.6e-25 Identity = 55/82 (67.07%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Lag0034178 vs. ExPASy Swiss-Prot
Match: Q7XQN1 (Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=2 SV=2) HSP 1 Score: 106.7 bits (265), Expect = 1.3e-22 Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of Lag0034178 vs. ExPASy Swiss-Prot
Match: Q9XHV0 (Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 4.8e-22 Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of Lag0034178 vs. ExPASy Swiss-Prot
Match: Q9LE63 (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 6.3e-22 Identity = 49/82 (59.76%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of Lag0034178 vs. ExPASy Swiss-Prot
Match: Q9LXF1 (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.2e-22 Identity = 49/82 (59.76%), Postives = 58/82 (70.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|