Lag0034150 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0034150
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr3: 4817945 .. 4819583 (+)
RNA-Seq Expression	Lag0034150
Synteny	Lag0034150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCAGGGTTGCTGTACTAGGCTGAATCGAGGCGACTCATGGGCACCAAGGACCGAACGAAAGGGAGAAGACTCGGCATGCGCAAGCGGGCCGAGGTCAAGCATGGGGTTGGGCCAAGGCCCAATTCCTCCGGCCTTGGCCCGACCCTCTGACCTATTTCTCCTTCGGTGTCTGTTTTCTGGTCGTGTCTTTGGGTTCGTGTCGTGCTGCCCTCATCTGCTCCTTAGATTTCGAAATGGTCTAGAATTACCCATAACAATCATGAACATGATCTTCGTTTAGTCACAAAGACAACATTTCGTATGCTATAAACTCAATTAATCTTCATGTTAATCACAATAGGTCAATATAGCCTATAGAATACCACTATTAAAAACGAGGCATTTACTTGATGAAAGGCTGGCCAAATGATCTCTACACGCGTATTTACTGCATGGCACTTTAAATGAAAAGTCAAAGAATAAGAGATGTTTGGATTTGGATTTGAAGAAGCCGATCTCACGAAGACACACATTATACGAAACACCCTTGAAATGGGCTACCGCTACCCAAAGAAATTAAAAATCTTTAAAGAGGGCAAGGGGACTATTCTATGTATAAAATTGATGTGAATGAATATGTGACATTAATTAGTAGTGGGCTGAGACATGTTGTTTGCGATAAGGTCAAATATTAAATTAAGACAAAGATGTGCATGCAATGTATAGGATCAGCATGGCCCAAGTTTACTCCAGTTTAACTCACTTCACCATTCCAAAACAATCAAGTTTCTTTTTTAATTTTTTATTTTTTATATTTCTTGGGCAGATGAAGATGAAAATTTAAACATCTAACTTTTAAGATAAATGTATAAGGTCGGTAAGTCAAAGATTTCGATTGTAATCGTACGTGTGCAAATAATACATTGGCTTAGCTTGCAAAGTCCCTATCAACCTTAATAACACACCACGCTAGAGCACAATTGGAAAATAAATCCTTTTTAAGATCATATGGGATTTATTTGTTTTATATGCATTATTTTTGGCTGATTTTTGCACTTTTTTTCCAATCGTCAACTCGTACACACTATAAACAATTAAAACGAAATCCAAGACTTTTTTTTTCCTTTGCTTCTCCAACAGTTTACTGGACATGGACCACAAAAACAAGGACAAAATTGAAACAGATTACGTTAAAAATATGTATAAAAGATTATAGTAATTTTAGTGTTTTTTTACATGTTAATTTATGTTATTAATTAGAATTAGGTTCATTTCATATTCAAGCTGTCATTATCTTGTAATAGTAAATCAGTAGTCTTGATTCTTTTTTAAGGGTAGATTAATCTCTTGTATCTCTGTGAGAGAAAAAATATATATATATAAGACTGATGCAGTAGATATATGATAGAATCGATGGTTAAGAATGTTGATGGAAAAATTTAGGCAGGAGGAACTCACGTGACCTTCACGTACCACCAACGATAAATTTGTTTGACAGGGGGAAGACGTGGCCTGCAAGACAGAAAAACCTGCATACCGGTGTGGTGCTTGCCACACTGCCTCCGATGCTTAAGTCAGAAAGCGGAAGGAGGAGAGAGCAAGAGAACGAGAGGGAGAGAGTGAAGAATAGAGTTCGGGGATCCTTTCTTCAATGA

mRNA sequence

ATGATTCAGGGTTGCTGTACTAGGCTGAATCGAGGCGACTCATGGGCACCAAGGACCGAACGAAAGGGAGAAGACTCGGCATGCGCAAGCGGGCCGAGGTCAAGCATGGGGTTGGGCCAAGGCCCAATTCCTCCGGCCTTGGCCCGACCCTCTGACCTATTTCTCCTTCGGTGTCTGTTTTCTGGTCGTGTCTTTGGGAGGAACTCACGTGACCTTCACGTACCACCAACGATAAATTTGTTTGACAGGGGGAAGACGTGGCCTGCAAGACAGAAAAACCTGCATACCGGTGTGGTGCTTGCCACACTGCCTCCGATGCTTAAGTCAGAAAGCGGAAGGAGGAGAGAGCAAGAGAACGAGAGGGAGAGAGTGAAGAATAGAGTTCGGGGATCCTTTCTTCAATGA

Coding sequence (CDS)

ATGATTCAGGGTTGCTGTACTAGGCTGAATCGAGGCGACTCATGGGCACCAAGGACCGAACGAAAGGGAGAAGACTCGGCATGCGCAAGCGGGCCGAGGTCAAGCATGGGGTTGGGCCAAGGCCCAATTCCTCCGGCCTTGGCCCGACCCTCTGACCTATTTCTCCTTCGGTGTCTGTTTTCTGGTCGTGTCTTTGGGAGGAACTCACGTGACCTTCACGTACCACCAACGATAAATTTGTTTGACAGGGGGAAGACGTGGCCTGCAAGACAGAAAAACCTGCATACCGGTGTGGTGCTTGCCACACTGCCTCCGATGCTTAAGTCAGAAAGCGGAAGGAGGAGAGAGCAAGAGAACGAGAGGGAGAGAGTGAAGAATAGAGTTCGGGGATCCTTTCTTCAATGA

Protein sequence

MIQGCCTRLNRGDSWAPRTERKGEDSACASGPRSSMGLGQGPIPPALARPSDLFLLRCLFSGRVFGRNSRDLHVPPTINLFDRGKTWPARQKNLHTGVVLATLPPMLKSESGRRREQENERERVKNRVRGSFLQ

Homology

The following BLAST results are available for this feature:

BLAST of Lag0034150 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0034150 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0034150.1	Lag0034150.1	mRNA