Lag0034067 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0034067
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDirigent protein
Locationchr3: 4119639 .. 4120190 (-)
RNA-Seq ExpressionLag0034067
SyntenyLag0034067
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTTCCAGCAAGATAATACTGATTTCCTTGGCGATTCTCGTAGCAGTTCATTCGATCGAGGCGTTAAACGCTAATGTAACTCGTATCCAGTTCTACATGCACGATATTGTGAGTGGTCCGAACGCCACCGCGATTCAAGTCGCCGGCCGGCGGACGAACTACACGGGTTTGGATCCTATCGCCGCCATGTTTGGGTCCGTTTTCGTGATGGATAACCCACTCACGGCGACGCCGGAGCTGAAATCGACGTTGATTGGGCGTGCTCAGGGGATTTATGCAATGTCGTCGCAGCAGAATGAGTTCAGCCTTCTGATGACGCTAACCTTCGCGATGACCAGCGGACCGTACAACGGCAGCTCGTTCAGCGTCGTTGGCCGCAATCCGATCATGAACGAAGTTCGGGAAATGCCGGTCGTCGGAGGGACGGGGGCTTTCCGGCTGGTTCGTGGGTATTGCTTAGCCAGGACATTCTCGTTTAGAGAAATGGATGCTGTGATTGGCTACAACGTCACATTGATTCACGATCTCTACAACTACTCCGATTGA

mRNA sequence

ATGGCCGCTTCCAGCAAGATAATACTGATTTCCTTGGCGATTCTCGTAGCAGTTCATTCGATCGAGGCGTTAAACGCTAATGTAACTCGTATCCAGTTCTACATGCACGATATTGTGAGTGGTCCGAACGCCACCGCGATTCAAGTCGCCGGCCGGCGGACGAACTACACGGGTTTGGATCCTATCGCCGCCATGTTTGGGTCCGTTTTCGTGATGGATAACCCACTCACGGCGACGCCGGAGCTGAAATCGACGTTGATTGGGCGTGCTCAGGGGATTTATGCAATGTCGTCGCAGCAGAATGAGTTCAGCCTTCTGATGACGCTAACCTTCGCGATGACCAGCGGACCGTACAACGGCAGCTCGTTCAGCGTCGTTGGCCGCAATCCGATCATGAACGAAGTTCGGGAAATGCCGGTCGTCGGAGGGACGGGGGCTTTCCGGCTGGTTCGTGGGTATTGCTTAGCCAGGACATTCTCGTTTAGAGAAATGGATGCTGTGATTGGCTACAACGTCACATTGATTCACGATCTCTACAACTACTCCGATTGA

Coding sequence (CDS)

ATGGCCGCTTCCAGCAAGATAATACTGATTTCCTTGGCGATTCTCGTAGCAGTTCATTCGATCGAGGCGTTAAACGCTAATGTAACTCGTATCCAGTTCTACATGCACGATATTGTGAGTGGTCCGAACGCCACCGCGATTCAAGTCGCCGGCCGGCGGACGAACTACACGGGTTTGGATCCTATCGCCGCCATGTTTGGGTCCGTTTTCGTGATGGATAACCCACTCACGGCGACGCCGGAGCTGAAATCGACGTTGATTGGGCGTGCTCAGGGGATTTATGCAATGTCGTCGCAGCAGAATGAGTTCAGCCTTCTGATGACGCTAACCTTCGCGATGACCAGCGGACCGTACAACGGCAGCTCGTTCAGCGTCGTTGGCCGCAATCCGATCATGAACGAAGTTCGGGAAATGCCGGTCGTCGGAGGGACGGGGGCTTTCCGGCTGGTTCGTGGGTATTGCTTAGCCAGGACATTCTCGTTTAGAGAAATGGATGCTGTGATTGGCTACAACGTCACATTGATTCACGATCTCTACAACTACTCCGATTGA

Protein sequence

MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLDPIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIHDLYNYSD
Homology
BLAST of Lag0034067 vs. NCBI nr
Match: XP_022135557.1 (dirigent protein 22-like [Momordica charantia])

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-85
Identity = 166/182 (91.21%), Postives = 172/182 (94.51%), Query Frame = 0

Query: 1   MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLD 60
           MA S K +LISLAILVA HSIEALN NVTRIQFYMHDIVSGPNATA+QVAGRRTNYTG D
Sbjct: 1   MAVSRKSLLISLAILVAAHSIEALNPNVTRIQFYMHDIVSGPNATAVQVAGRRTNYTGSD 60

Query: 61  PIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNG 120
           PIAAMFGSVF+MDNPLTATPEL STLIGRAQGIYAMSSQQNEFSLLMTLTFA+T G YNG
Sbjct: 61  PIAAMFGSVFMMDNPLTATPELNSTLIGRAQGIYAMSSQQNEFSLLMTLTFAITGGTYNG 120

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIHDLYN 180
           SSFSVVGRNPIM+EVREMPVVGGTGAFRL RGYCLARTFSFREMDAVIGYNVTLIHDLY+
Sbjct: 121 SSFSVVGRNPIMSEVREMPVVGGTGAFRLARGYCLARTFSFREMDAVIGYNVTLIHDLYD 180

Query: 181 YS 183
           YS
Sbjct: 181 YS 182

BLAST of Lag0034067 vs. NCBI nr
Match: KAA0058015.1 (dirigent protein 22-like [Cucumis melo var. makuwa] >TYJ98238.1 dirigent protein 22-like [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 161/182 (88.46%), Postives = 169/182 (92.86%), Query Frame = 0

Query: 1   MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLD 60
           MA SSKI++IS+AILVAV SIEAL+ NVTRIQFYMHDIVSGPN TAIQVAGR+TNYTG D
Sbjct: 1   MAVSSKILVISMAILVAVRSIEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYTGTD 60

Query: 61  PIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNG 120
           PIAAMFGSVF+MDNPLT TPEL STLIGRAQGIYAMSSQQNEFSLLMTLTF M  G YNG
Sbjct: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSSQQNEFSLLMTLTFGMIGGQYNG 120

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIHDLYN 180
           SSFSVVGRNPIMNEVREMPVVGGTG FRLVRGYCLART+SFR MDAVIGYNVTLIHDLY+
Sbjct: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTYSFRNMDAVIGYNVTLIHDLYD 180

Query: 181 YS 183
           YS
Sbjct: 181 YS 182

BLAST of Lag0034067 vs. NCBI nr
Match: XP_031742018.1 (dirigent protein 22-like [Cucumis sativus] >KGN63770.1 hypothetical protein Csa_013414 [Cucumis sativus])

HSP 1 Score: 313.5 bits (802), Expect = 1.2e-81
Identity = 160/182 (87.91%), Postives = 168/182 (92.31%), Query Frame = 0

Query: 1   MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLD 60
           MA SSKI++IS+AILVAV S EAL+ NVTRIQFYMHDIVSGPN TAIQVAGR+TNY G D
Sbjct: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60

Query: 61  PIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNG 120
           PIAAMFGSVF+MDNPLT TPEL STLIGRAQGIYAMS+QQNEFSLLMTLTF MT G YNG
Sbjct: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIHDLYN 180
           SSFSVVGRNPIMNEVREMPVVGGTG FRLVRGYCLARTFSFR MDAVIGYNVTLIHDLY+
Sbjct: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIHDLYD 180

Query: 181 YS 183
           YS
Sbjct: 181 YS 182

BLAST of Lag0034067 vs. NCBI nr
Match: XP_021286251.1 (dirigent protein 22-like [Herrania umbratica])

HSP 1 Score: 257.3 bits (656), Expect = 1.0e-64
Identity = 126/176 (71.59%), Postives = 153/176 (86.93%), Query Frame = 0

Query: 1   MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLD 60
           MA +SK +L+ +A++ AV++ +A+   VTR QFYMHDIV GP  TA++VAG R+N+TG D
Sbjct: 1   MAYASKFLLL-IALVAAVYNTDAVKQKVTRFQFYMHDIVGGPEPTAVRVAG-RSNFTGQD 60

Query: 61  PIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNG 120
           PIAA FGS+F+MDNPLT TP + STL+GRAQG+YAMSSQQ EFSLLMTLT+A TSGPYNG
Sbjct: 61  PIAATFGSIFMMDNPLTVTPNINSTLVGRAQGMYAMSSQQKEFSLLMTLTYAFTSGPYNG 120

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIH 177
           S+FSV+GRNP+MNEVREMPVVGGTG FRL RGYCLAR++S +EMDAVIGYNVTL+H
Sbjct: 121 STFSVLGRNPVMNEVREMPVVGGTGKFRLARGYCLARSYSMKEMDAVIGYNVTLLH 174

BLAST of Lag0034067 vs. NCBI nr
Match: EOY22152.1 (Disease resistance response protein, putative [Theobroma cacao])

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-63
Identity = 125/176 (71.02%), Postives = 151/176 (85.80%), Query Frame = 0

Query: 1   MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLD 60
           MA +SK +L+ +A++ A ++ +AL   VTRIQFYMHDIV GP  TA++VA  R+N+TG D
Sbjct: 1   MAYASKFLLL-IALVAAAYNTDALKQKVTRIQFYMHDIVGGPEPTAVRVAS-RSNFTGQD 60

Query: 61  PIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNG 120
           PIAA FGS+ +MDNPLT TP + STL+GRAQG+YAMSSQQ EFSLLMTLT+A TSGPYNG
Sbjct: 61  PIAATFGSIVMMDNPLTVTPNINSTLVGRAQGMYAMSSQQKEFSLLMTLTYAFTSGPYNG 120

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIH 177
           S+FSV+GRNP+MNEVREMPVVGGTG FRL RGYCLAR++S +EMDAVIGYNVTL+H
Sbjct: 121 STFSVLGRNPVMNEVREMPVVGGTGKFRLARGYCLARSYSMKEMDAVIGYNVTLLH 174

BLAST of Lag0034067 vs. ExPASy Swiss-Prot
Match: Q84TH6 (Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.9e-34
Identity = 73/151 (48.34%), Postives = 103/151 (68.21%), Query Frame = 0

Query: 28  VTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLDPIAAMFGSVFVMDNPLTATPELKSTLI 87
           VT +QFY HD +SG N TA++VA      T  +    +FG+VF++D+ LT T + KS L+
Sbjct: 42  VTNLQFYFHDTLSGKNPTAVKVA----QGTDTEKSPTLFGAVFMVDDALTETADPKSKLV 101

Query: 88  GRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSSFSVVGRNPIMNEVREMPVVGGTGAF 147
           GRAQG+Y  SS + E  L+M ++F    GPY  S+ S++G+N  MN +REMP+VGGTG F
Sbjct: 102 GRAQGLYG-SSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMF 161

Query: 148 RLVRGYCLART--FSFREMDAVIGYNVTLIH 177
           R+ RGY +ART  F  +  DA++GYNVT++H
Sbjct: 162 RMARGYAIARTNWFDPKTGDAIVGYNVTIMH 187

BLAST of Lag0034067 vs. ExPASy Swiss-Prot
Match: Q9FIG7 (Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-31
Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 0

Query: 29  TRIQFYMHDIVSGPNATAIQVA-GRRTNYTGLDPIAAMFGSVFVMDNPLTATPELKSTLI 88
           T + FY HD++SG   TA++VA  RRTN + ++     FG + + D+PLT  P+  S  +
Sbjct: 43  THLHFYFHDVISGDKPTAVKVAEARRTNSSNVN-----FGVIMIADDPLTEGPDPSSKEV 102

Query: 89  GRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSSFSVVGRNPIMNEVREMPVVGGTGAF 148
           GRAQG+YA+++ +N  S  M    A T+G +NGS+ ++ GRN I ++VREMP++GGTGAF
Sbjct: 103 GRAQGMYALTAMKN-ISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAF 162

Query: 149 RLVRGYCLARTFSFREMDAVIGYNVTLIH 177
           R  RGY  A+T+    +DAV+ YNV + H
Sbjct: 163 RFARGYAQAKTYKVVGLDAVVEYNVFIWH 185

BLAST of Lag0034067 vs. ExPASy Swiss-Prot
Match: Q67YM6 (Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.4e-31
Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = 0

Query: 28  VTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLDPIAAMFGSVFVMDNPLTATPELKSTLI 87
           +T + FY HDI+SG   T I+VA       G +  A +FG+V ++D P+T  PEL S  +
Sbjct: 50  LTHLHFYFHDIISGDKPTTIRVA----EAPGTNSSATVFGAVLIVDAPVTEGPELSSKEV 109

Query: 88  GRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSSFSVVGRNPIMNEVREMPVVGGTGAF 147
           GRAQG+YA S+    F   M   F  T G +NGS+ ++ GRNPI+ E RE+P++GGTG F
Sbjct: 110 GRAQGLYA-STDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDF 169

Query: 148 RLVRGYCLARTFSFREMDAVIGYNVTLIH 177
           R  RGY L +T+    +DAV+ YNV + H
Sbjct: 170 RFARGYALPKTYKVVNIDAVVEYNVFIWH 193

BLAST of Lag0034067 vs. ExPASy Swiss-Prot
Match: Q9SS03 (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.5e-31
Identity = 71/151 (47.02%), Postives = 98/151 (64.90%), Query Frame = 0

Query: 28  VTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLDPIAAMFGSVFVMDNPLTATPELKSTLI 87
           +T + FY HDIVSG   T++QVA   T  +     A  FG V V+D+ LT  PE+ S  +
Sbjct: 44  LTHLHFYFHDIVSGDKPTSVQVANGPTTNSS----ATGFGLVAVVDDKLTVGPEITSEEV 103

Query: 88  GRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSSFSVVGRNPIMNEVREMPVVGGTGAF 147
           GRAQG+YA S+ QN+  LLM      T G ++ S+ ++ GRNP++++VREMP++GGTGAF
Sbjct: 104 GRAQGMYA-SADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAF 163

Query: 148 RLVRGYCLART--FSFREMDAVIGYNVTLIH 177
           R  RGY LA+T  F+    DAV+ YNV + H
Sbjct: 164 RFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189

BLAST of Lag0034067 vs. ExPASy Swiss-Prot
Match: Q9C523 (Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.9e-30
Identity = 72/176 (40.91%), Postives = 112/176 (63.64%), Query Frame = 0

Query: 11  SLAILVAVHSIEALNAN--------VTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLDPI 70
           +LA+++   + E L +N        +T  + Y HDIV+G +++++ +      YTG    
Sbjct: 14  TLALVLISVTGETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTG---- 73

Query: 71  AAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSS 130
           A  FG + ++DNPLT TP+L S ++GRAQG YA +S++ E  LLM + FA+  G YNGS+
Sbjct: 74  ATGFGLMRMIDNPLTLTPKLSSKMVGRAQGFYAGTSKE-EIGLLMAMNFAILDGKYNGST 133

Query: 131 FSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLART--FSFREMDAVIGYNVTLIH 177
            +V+GRN + ++VREMPV+GG+G FR  RGY  A T  F+ +  +A++ YN  L+H
Sbjct: 134 ITVLGRNSVFDKVREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLH 184

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022135557.13.0e-8591.21dirigent protein 22-like [Momordica charantia][more]
KAA0058015.11.8e-8288.46dirigent protein 22-like [Cucumis melo var. makuwa] >TYJ98238.1 dirigent protein... [more]
XP_031742018.11.2e-8187.91dirigent protein 22-like [Cucumis sativus] >KGN63770.1 hypothetical protein Csa_... [more]
XP_021286251.11.0e-6471.59dirigent protein 22-like [Herrania umbratica][more]
EOY22152.11.4e-6371.02Disease resistance response protein, putative [Theobroma cacao][more]
Match NameE-valueIdentityDescription
Q84TH61.9e-3448.34Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1[more]
Q9FIG71.5e-3144.97Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1[more]
Q67YM64.4e-3144.97Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1[more]
Q9SS037.5e-3147.02Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1[more]
Q9C5232.9e-3040.91Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004265Dirigent proteinPFAMPF03018Dirigentcoord: 29..174
e-value: 1.6E-51
score: 174.0
IPR044859Allene oxide cyclase/Dirigent proteinGENE3D2.40.480.10coord: 14..180
e-value: 1.3E-15
score: 59.4
NoneNo IPR availablePANTHERPTHR21495:SF167DIRIGENT PROTEINcoord: 4..176
NoneNo IPR availablePANTHERPTHR21495NUCLEOPORIN-RELATEDcoord: 4..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0034067.1Lag0034067.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0048046 apoplast