Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTTCCAGCAAGATAATACTGATTTCCTTGGCGATTCTCGTAGCAGTTCATTCGATCGAGGCGTTAAACGCTAATGTAACTCGTATCCAGTTCTACATGCACGATATTGTGAGTGGTCCGAACGCCACCGCGATTCAAGTCGCCGGCCGGCGGACGAACTACACGGGTTTGGATCCTATCGCCGCCATGTTTGGGTCCGTTTTCGTGATGGATAACCCACTCACGGCGACGCCGGAGCTGAAATCGACGTTGATTGGGCGTGCTCAGGGGATTTATGCAATGTCGTCGCAGCAGAATGAGTTCAGCCTTCTGATGACGCTAACCTTCGCGATGACCAGCGGACCGTACAACGGCAGCTCGTTCAGCGTCGTTGGCCGCAATCCGATCATGAACGAAGTTCGGGAAATGCCGGTCGTCGGAGGGACGGGGGCTTTCCGGCTGGTTCGTGGGTATTGCTTAGCCAGGACATTCTCGTTTAGAGAAATGGATGCTGTGATTGGCTACAACGTCACATTGATTCACGATCTCTACAACTACTCCGATTGA
mRNA sequence
ATGGCCGCTTCCAGCAAGATAATACTGATTTCCTTGGCGATTCTCGTAGCAGTTCATTCGATCGAGGCGTTAAACGCTAATGTAACTCGTATCCAGTTCTACATGCACGATATTGTGAGTGGTCCGAACGCCACCGCGATTCAAGTCGCCGGCCGGCGGACGAACTACACGGGTTTGGATCCTATCGCCGCCATGTTTGGGTCCGTTTTCGTGATGGATAACCCACTCACGGCGACGCCGGAGCTGAAATCGACGTTGATTGGGCGTGCTCAGGGGATTTATGCAATGTCGTCGCAGCAGAATGAGTTCAGCCTTCTGATGACGCTAACCTTCGCGATGACCAGCGGACCGTACAACGGCAGCTCGTTCAGCGTCGTTGGCCGCAATCCGATCATGAACGAAGTTCGGGAAATGCCGGTCGTCGGAGGGACGGGGGCTTTCCGGCTGGTTCGTGGGTATTGCTTAGCCAGGACATTCTCGTTTAGAGAAATGGATGCTGTGATTGGCTACAACGTCACATTGATTCACGATCTCTACAACTACTCCGATTGA
Coding sequence (CDS)
ATGGCCGCTTCCAGCAAGATAATACTGATTTCCTTGGCGATTCTCGTAGCAGTTCATTCGATCGAGGCGTTAAACGCTAATGTAACTCGTATCCAGTTCTACATGCACGATATTGTGAGTGGTCCGAACGCCACCGCGATTCAAGTCGCCGGCCGGCGGACGAACTACACGGGTTTGGATCCTATCGCCGCCATGTTTGGGTCCGTTTTCGTGATGGATAACCCACTCACGGCGACGCCGGAGCTGAAATCGACGTTGATTGGGCGTGCTCAGGGGATTTATGCAATGTCGTCGCAGCAGAATGAGTTCAGCCTTCTGATGACGCTAACCTTCGCGATGACCAGCGGACCGTACAACGGCAGCTCGTTCAGCGTCGTTGGCCGCAATCCGATCATGAACGAAGTTCGGGAAATGCCGGTCGTCGGAGGGACGGGGGCTTTCCGGCTGGTTCGTGGGTATTGCTTAGCCAGGACATTCTCGTTTAGAGAAATGGATGCTGTGATTGGCTACAACGTCACATTGATTCACGATCTCTACAACTACTCCGATTGA
Protein sequence
MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLDPIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIHDLYNYSD
Homology
BLAST of Lag0034067 vs. NCBI nr
Match:
XP_022135557.1 (dirigent protein 22-like [Momordica charantia])
HSP 1 Score: 325.5 bits (833), Expect = 3.0e-85
Identity = 166/182 (91.21%), Postives = 172/182 (94.51%), Query Frame = 0
Query: 1 MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLD 60
MA S K +LISLAILVA HSIEALN NVTRIQFYMHDIVSGPNATA+QVAGRRTNYTG D
Sbjct: 1 MAVSRKSLLISLAILVAAHSIEALNPNVTRIQFYMHDIVSGPNATAVQVAGRRTNYTGSD 60
Query: 61 PIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNG 120
PIAAMFGSVF+MDNPLTATPEL STLIGRAQGIYAMSSQQNEFSLLMTLTFA+T G YNG
Sbjct: 61 PIAAMFGSVFMMDNPLTATPELNSTLIGRAQGIYAMSSQQNEFSLLMTLTFAITGGTYNG 120
Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIHDLYN 180
SSFSVVGRNPIM+EVREMPVVGGTGAFRL RGYCLARTFSFREMDAVIGYNVTLIHDLY+
Sbjct: 121 SSFSVVGRNPIMSEVREMPVVGGTGAFRLARGYCLARTFSFREMDAVIGYNVTLIHDLYD 180
Query: 181 YS 183
YS
Sbjct: 181 YS 182
BLAST of Lag0034067 vs. NCBI nr
Match:
KAA0058015.1 (dirigent protein 22-like [Cucumis melo var. makuwa] >TYJ98238.1 dirigent protein 22-like [Cucumis melo var. makuwa])
HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 161/182 (88.46%), Postives = 169/182 (92.86%), Query Frame = 0
Query: 1 MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLD 60
MA SSKI++IS+AILVAV SIEAL+ NVTRIQFYMHDIVSGPN TAIQVAGR+TNYTG D
Sbjct: 1 MAVSSKILVISMAILVAVRSIEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYTGTD 60
Query: 61 PIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNG 120
PIAAMFGSVF+MDNPLT TPEL STLIGRAQGIYAMSSQQNEFSLLMTLTF M G YNG
Sbjct: 61 PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSSQQNEFSLLMTLTFGMIGGQYNG 120
Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIHDLYN 180
SSFSVVGRNPIMNEVREMPVVGGTG FRLVRGYCLART+SFR MDAVIGYNVTLIHDLY+
Sbjct: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTYSFRNMDAVIGYNVTLIHDLYD 180
Query: 181 YS 183
YS
Sbjct: 181 YS 182
BLAST of Lag0034067 vs. NCBI nr
Match:
XP_031742018.1 (dirigent protein 22-like [Cucumis sativus] >KGN63770.1 hypothetical protein Csa_013414 [Cucumis sativus])
HSP 1 Score: 313.5 bits (802), Expect = 1.2e-81
Identity = 160/182 (87.91%), Postives = 168/182 (92.31%), Query Frame = 0
Query: 1 MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLD 60
MA SSKI++IS+AILVAV S EAL+ NVTRIQFYMHDIVSGPN TAIQVAGR+TNY G D
Sbjct: 1 MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60
Query: 61 PIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNG 120
PIAAMFGSVF+MDNPLT TPEL STLIGRAQGIYAMS+QQNEFSLLMTLTF MT G YNG
Sbjct: 61 PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120
Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIHDLYN 180
SSFSVVGRNPIMNEVREMPVVGGTG FRLVRGYCLARTFSFR MDAVIGYNVTLIHDLY+
Sbjct: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIHDLYD 180
Query: 181 YS 183
YS
Sbjct: 181 YS 182
BLAST of Lag0034067 vs. NCBI nr
Match:
XP_021286251.1 (dirigent protein 22-like [Herrania umbratica])
HSP 1 Score: 257.3 bits (656), Expect = 1.0e-64
Identity = 126/176 (71.59%), Postives = 153/176 (86.93%), Query Frame = 0
Query: 1 MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLD 60
MA +SK +L+ +A++ AV++ +A+ VTR QFYMHDIV GP TA++VAG R+N+TG D
Sbjct: 1 MAYASKFLLL-IALVAAVYNTDAVKQKVTRFQFYMHDIVGGPEPTAVRVAG-RSNFTGQD 60
Query: 61 PIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNG 120
PIAA FGS+F+MDNPLT TP + STL+GRAQG+YAMSSQQ EFSLLMTLT+A TSGPYNG
Sbjct: 61 PIAATFGSIFMMDNPLTVTPNINSTLVGRAQGMYAMSSQQKEFSLLMTLTYAFTSGPYNG 120
Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIH 177
S+FSV+GRNP+MNEVREMPVVGGTG FRL RGYCLAR++S +EMDAVIGYNVTL+H
Sbjct: 121 STFSVLGRNPVMNEVREMPVVGGTGKFRLARGYCLARSYSMKEMDAVIGYNVTLLH 174
BLAST of Lag0034067 vs. NCBI nr
Match:
EOY22152.1 (Disease resistance response protein, putative [Theobroma cacao])
HSP 1 Score: 253.4 bits (646), Expect = 1.4e-63
Identity = 125/176 (71.02%), Postives = 151/176 (85.80%), Query Frame = 0
Query: 1 MAASSKIILISLAILVAVHSIEALNANVTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLD 60
MA +SK +L+ +A++ A ++ +AL VTRIQFYMHDIV GP TA++VA R+N+TG D
Sbjct: 1 MAYASKFLLL-IALVAAAYNTDALKQKVTRIQFYMHDIVGGPEPTAVRVAS-RSNFTGQD 60
Query: 61 PIAAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNG 120
PIAA FGS+ +MDNPLT TP + STL+GRAQG+YAMSSQQ EFSLLMTLT+A TSGPYNG
Sbjct: 61 PIAATFGSIVMMDNPLTVTPNINSTLVGRAQGMYAMSSQQKEFSLLMTLTYAFTSGPYNG 120
Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLARTFSFREMDAVIGYNVTLIH 177
S+FSV+GRNP+MNEVREMPVVGGTG FRL RGYCLAR++S +EMDAVIGYNVTL+H
Sbjct: 121 STFSVLGRNPVMNEVREMPVVGGTGKFRLARGYCLARSYSMKEMDAVIGYNVTLLH 174
BLAST of Lag0034067 vs. ExPASy Swiss-Prot
Match:
Q84TH6 (Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 1.9e-34
Identity = 73/151 (48.34%), Postives = 103/151 (68.21%), Query Frame = 0
Query: 28 VTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLDPIAAMFGSVFVMDNPLTATPELKSTLI 87
VT +QFY HD +SG N TA++VA T + +FG+VF++D+ LT T + KS L+
Sbjct: 42 VTNLQFYFHDTLSGKNPTAVKVA----QGTDTEKSPTLFGAVFMVDDALTETADPKSKLV 101
Query: 88 GRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSSFSVVGRNPIMNEVREMPVVGGTGAF 147
GRAQG+Y SS + E L+M ++F GPY S+ S++G+N MN +REMP+VGGTG F
Sbjct: 102 GRAQGLYG-SSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMF 161
Query: 148 RLVRGYCLART--FSFREMDAVIGYNVTLIH 177
R+ RGY +ART F + DA++GYNVT++H
Sbjct: 162 RMARGYAIARTNWFDPKTGDAIVGYNVTIMH 187
BLAST of Lag0034067 vs. ExPASy Swiss-Prot
Match:
Q9FIG7 (Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 1.5e-31
Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 0
Query: 29 TRIQFYMHDIVSGPNATAIQVA-GRRTNYTGLDPIAAMFGSVFVMDNPLTATPELKSTLI 88
T + FY HD++SG TA++VA RRTN + ++ FG + + D+PLT P+ S +
Sbjct: 43 THLHFYFHDVISGDKPTAVKVAEARRTNSSNVN-----FGVIMIADDPLTEGPDPSSKEV 102
Query: 89 GRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSSFSVVGRNPIMNEVREMPVVGGTGAF 148
GRAQG+YA+++ +N S M A T+G +NGS+ ++ GRN I ++VREMP++GGTGAF
Sbjct: 103 GRAQGMYALTAMKN-ISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAF 162
Query: 149 RLVRGYCLARTFSFREMDAVIGYNVTLIH 177
R RGY A+T+ +DAV+ YNV + H
Sbjct: 163 RFARGYAQAKTYKVVGLDAVVEYNVFIWH 185
BLAST of Lag0034067 vs. ExPASy Swiss-Prot
Match:
Q67YM6 (Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1)
HSP 1 Score: 136.0 bits (341), Expect = 4.4e-31
Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = 0
Query: 28 VTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLDPIAAMFGSVFVMDNPLTATPELKSTLI 87
+T + FY HDI+SG T I+VA G + A +FG+V ++D P+T PEL S +
Sbjct: 50 LTHLHFYFHDIISGDKPTTIRVA----EAPGTNSSATVFGAVLIVDAPVTEGPELSSKEV 109
Query: 88 GRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSSFSVVGRNPIMNEVREMPVVGGTGAF 147
GRAQG+YA S+ F M F T G +NGS+ ++ GRNPI+ E RE+P++GGTG F
Sbjct: 110 GRAQGLYA-STDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDF 169
Query: 148 RLVRGYCLARTFSFREMDAVIGYNVTLIH 177
R RGY L +T+ +DAV+ YNV + H
Sbjct: 170 RFARGYALPKTYKVVNIDAVVEYNVFIWH 193
BLAST of Lag0034067 vs. ExPASy Swiss-Prot
Match:
Q9SS03 (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)
HSP 1 Score: 135.2 bits (339), Expect = 7.5e-31
Identity = 71/151 (47.02%), Postives = 98/151 (64.90%), Query Frame = 0
Query: 28 VTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLDPIAAMFGSVFVMDNPLTATPELKSTLI 87
+T + FY HDIVSG T++QVA T + A FG V V+D+ LT PE+ S +
Sbjct: 44 LTHLHFYFHDIVSGDKPTSVQVANGPTTNSS----ATGFGLVAVVDDKLTVGPEITSEEV 103
Query: 88 GRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSSFSVVGRNPIMNEVREMPVVGGTGAF 147
GRAQG+YA S+ QN+ LLM T G ++ S+ ++ GRNP++++VREMP++GGTGAF
Sbjct: 104 GRAQGMYA-SADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAF 163
Query: 148 RLVRGYCLART--FSFREMDAVIGYNVTLIH 177
R RGY LA+T F+ DAV+ YNV + H
Sbjct: 164 RFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189
BLAST of Lag0034067 vs. ExPASy Swiss-Prot
Match:
Q9C523 (Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1)
HSP 1 Score: 133.3 bits (334), Expect = 2.9e-30
Identity = 72/176 (40.91%), Postives = 112/176 (63.64%), Query Frame = 0
Query: 11 SLAILVAVHSIEALNAN--------VTRIQFYMHDIVSGPNATAIQVAGRRTNYTGLDPI 70
+LA+++ + E L +N +T + Y HDIV+G +++++ + YTG
Sbjct: 14 TLALVLISVTGETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTG---- 73
Query: 71 AAMFGSVFVMDNPLTATPELKSTLIGRAQGIYAMSSQQNEFSLLMTLTFAMTSGPYNGSS 130
A FG + ++DNPLT TP+L S ++GRAQG YA +S++ E LLM + FA+ G YNGS+
Sbjct: 74 ATGFGLMRMIDNPLTLTPKLSSKMVGRAQGFYAGTSKE-EIGLLMAMNFAILDGKYNGST 133
Query: 131 FSVVGRNPIMNEVREMPVVGGTGAFRLVRGYCLART--FSFREMDAVIGYNVTLIH 177
+V+GRN + ++VREMPV+GG+G FR RGY A T F+ + +A++ YN L+H
Sbjct: 134 ITVLGRNSVFDKVREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLH 184
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022135557.1 | 3.0e-85 | 91.21 | dirigent protein 22-like [Momordica charantia] | [more] |
KAA0058015.1 | 1.8e-82 | 88.46 | dirigent protein 22-like [Cucumis melo var. makuwa] >TYJ98238.1 dirigent protein... | [more] |
XP_031742018.1 | 1.2e-81 | 87.91 | dirigent protein 22-like [Cucumis sativus] >KGN63770.1 hypothetical protein Csa_... | [more] |
XP_021286251.1 | 1.0e-64 | 71.59 | dirigent protein 22-like [Herrania umbratica] | [more] |
EOY22152.1 | 1.4e-63 | 71.02 | Disease resistance response protein, putative [Theobroma cacao] | [more] |
Match Name | E-value | Identity | Description | |
Q84TH6 | 1.9e-34 | 48.34 | Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1 | [more] |
Q9FIG7 | 1.5e-31 | 44.97 | Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1 | [more] |
Q67YM6 | 4.4e-31 | 44.97 | Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1 | [more] |
Q9SS03 | 7.5e-31 | 47.02 | Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1 | [more] |
Q9C523 | 2.9e-30 | 40.91 | Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1 | [more] |