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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTCTTCTCCACGCCGGAACGTCCTCCGACTCCCTCACCCAACTCCGGCACGGCGGCCAAGGGCCCATCCACCGCCCTGCTCCGCTCCGTTACGGCTCTGGCCGCTCTCTGCGCCAAAACAGCCGCCCGAGTCACCAAGAAGCTCAAGTTGAAGCACAGTCACGATCACCCGAGTCACCCGAGTCAGCTGAGTCATCCGAGTCCGAGGTCGCCGTTGGCTCGGCCGAAGAAGATGCTGAAGACGATCAGCCAATCGGCGATGACTTTGGTTCACAAGAAAAAGACCGGCCGACGAGATGAAAGGGCGGAGGAGGAGGAGGAAGAAGATGAAGAAGAAGAAGAAGAGTGGGGCCACGGTGGAGTATGGCAGAGGGGGATCTTGATGGGCGACAAATGCCAGCCGTTGGATTTCCCGGGTGCAATTTACTACGATAGTAACGGCAACAAGATGAACGAGCCCCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCTCCTTAGAAAAACTCAAGCCTGA mRNA sequence ATGGTCTTCTCCACGCCGGAACGTCCTCCGACTCCCTCACCCAACTCCGGCACGGCGGCCAAGGGCCCATCCACCGCCCTGCTCCGCTCCGTTACGGCTCTGGCCGCTCTCTGCGCCAAAACAGCCGCCCGAGTCACCAAGAAGCTCAAGTTGAAGCACAGTCACGATCACCCGAGTCACCCGAGTCAGCTGAGTCATCCGAGTCCGAGGTCGCCGTTGGCTCGGCCGAAGAAGATGCTGAAGACGATCAGCCAATCGGCGATGACTTTGGTTCACAAGAAAAAGACCGGCCGACGAGATGAAAGGGCGGAGGAGGAGGAGGAAGAAGATGAAGAAGAAGAAGAAGAGTGGGGCCACGGTGGAGTATGGCAGAGGGGGATCTTGATGGGCGACAAATGCCAGCCGTTGGATTTCCCGGGTGCAATTTACTACGATAGTAACGGCAACAAGATGAACGAGCCCCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCTCCTTAGAAAAACTCAAGCCTGA Coding sequence (CDS) ATGGTCTTCTCCACGCCGGAACGTCCTCCGACTCCCTCACCCAACTCCGGCACGGCGGCCAAGGGCCCATCCACCGCCCTGCTCCGCTCCGTTACGGCTCTGGCCGCTCTCTGCGCCAAAACAGCCGCCCGAGTCACCAAGAAGCTCAAGTTGAAGCACAGTCACGATCACCCGAGTCACCCGAGTCAGCTGAGTCATCCGAGTCCGAGGTCGCCGTTGGCTCGGCCGAAGAAGATGCTGAAGACGATCAGCCAATCGGCGATGACTTTGGTTCACAAGAAAAAGACCGGCCGACGAGATGAAAGGGCGGAGGAGGAGGAGGAAGAAGATGAAGAAGAAGAAGAAGAGTGGGGCCACGGTGGAGTATGGCAGAGGGGGATCTTGATGGGCGACAAATGCCAGCCGTTGGATTTCCCGGGTGCAATTTACTACGATAGTAACGGCAACAAGATGAACGAGCCCCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCTCCTTAGAAAAACTCAAGCCTGA Protein sequence MVFSTPERPPTPSPNSGTAAKGPSTALLRSVTALAALCAKTAARVTKKLKLKHSHDHPSHPSQLSHPSPRSPLARPKKMLKTISQSAMTLVHKKKTGRRDERAEEEEEEDEEEEEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTQA
Homology
BLAST of Lag0034028 vs. NCBI nr
Match: KGN63795.1 (hypothetical protein Csa_013677 [Cucumis sativus]) HSP 1 Score: 238.0 bits (606), Expect = 6.0e-59 Identity = 132/173 (76.30%), Postives = 142/173 (82.08%), Query Frame = 0
Query: 1 MVFSTPERPPTPSPNSGTAAKGPSTALLRSVTALAALCAKTAARVTKKLKLKHSHDHPSH 60
M+FSTP+ PPT P+SG AK PST L SV ALAALCAK AA +TKKLK K S DHP
Sbjct: 1 MLFSTPDHPPT--PDSGRTAKTPSTGLRGSVAALAALCAKKAALLTKKLKFKPSQDHP-- 60
Query: 61 PSQLSHPSPRSPLARPKKMLKTISQSAMTLVHKKKTGRRDERAEEEEEEDEEEEEEWGHG 120
SHPSPRSPLARPKKMLKTISQSAM+LVHKK+TGR EEEE+EEEEE+WG G
Sbjct: 61 ----SHPSPRSPLARPKKMLKTISQSAMSLVHKKRTGR-----PVEEEEEEEEEEKWGQG 120
Query: 121 GVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTQ 174
GVWQRGILMGDKCQPLDF GAIYYDSNG KM+EPPLRSPRASPLPGYLLRK+Q
Sbjct: 121 GVWQRGILMGDKCQPLDFSGAIYYDSNGQKMDEPPLRSPRASPLPGYLLRKSQ 160
BLAST of Lag0034028 vs. NCBI nr
Match: TYK28394.1 (hypothetical protein E5676_scaffold629G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 237.7 bits (605), Expect = 7.8e-59 Identity = 132/173 (76.30%), Postives = 144/173 (83.24%), Query Frame = 0
Query: 1 MVFSTPERPPTPSPNSGTAAKGPSTALLRSVTALAALCAKTAARVTKKLKLKHSHDHPSH 60
M+FSTPE PPT P SG +A PST L RS+TALAALCAK AA +TKKLK K S D
Sbjct: 1 MLFSTPEHPPT--PGSGRSANTPSTGLRRSLTALAALCAKKAALLTKKLKSKPSQD---- 60
Query: 61 PSQLSHPSPRSPLARPKKMLKTISQSAMTLVHKKKTGRRDERAEEEEEEDEEEEEEWGHG 120
HPSPRSPLARPKKMLKTISQSAM LVHKK+TGR++E EEEEEE+ EEEE+WG G
Sbjct: 61 -----HPSPRSPLARPKKMLKTISQSAMNLVHKKRTGRQEEE-EEEEEEEVEEEEKWGQG 120
Query: 121 GVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTQ 174
GVWQRGILMGDKCQPLDF GAIYYDSNG+KM+EPPLRSPRASPLPGYLLRK+Q
Sbjct: 121 GVWQRGILMGDKCQPLDFSGAIYYDSNGHKMDEPPLRSPRASPLPGYLLRKSQ 161
BLAST of Lag0034028 vs. NCBI nr
Match: XP_038879173.1 (uncharacterized protein LOC120071149 [Benincasa hispida]) HSP 1 Score: 235.7 bits (600), Expect = 3.0e-58 Identity = 133/171 (77.78%), Postives = 139/171 (81.29%), Query Frame = 0
Query: 1 MVFSTPERPPTPSPNSGTAAKGPSTALLRSVTALAALCAKTAARVTKKLKLKHSHDHPSH 60
MVFSTPE P T +S TAAK PST L RSVTALA CAK AA VTKKLKLK SH HP
Sbjct: 1 MVFSTPETPHT--ADSDTAAKTPSTGLRRSVTALAVFCAKKAALVTKKLKLKPSHHHP-- 60
Query: 61 PSQLSHPSPRSPLARPKKMLKTISQSAMTLVHKKKTGRRDERAEEEEEEDEEEEEEWGHG 120
SHPSP+SPLA PKKMLKTISQSAM+LV KKKTGRR EEE++EEEEEWG G
Sbjct: 61 ----SHPSPKSPLACPKKMLKTISQSAMSLVQKKKTGRR-------EEEEDEEEEEWGQG 120
Query: 121 GVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRK 172
GVWQRGILMGDKCQPL+F GAIYYDSNGNKMNEPPLRSPRASPLPGYLLRK
Sbjct: 121 GVWQRGILMGDKCQPLEFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRK 156
BLAST of Lag0034028 vs. NCBI nr
Match: XP_023531310.1 (uncharacterized protein LOC111793589 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191.4 bits (485), Expect = 6.4e-45 Identity = 114/174 (65.52%), Postives = 120/174 (68.97%), Query Frame = 0
Query: 1 MVFSTPERPPTPSPNSGTAAKGPSTALLRSVTALAALCAKTAARVTKKLKLKHSHDHPSH 60
M STPERP P NS T T LLRSV L LCAK AA VTKKLK K
Sbjct: 1 MASSTPERP--PFTNSCTVPNSLPTGLLRSVKVLVVLCAKKAAHVTKKLKWK-------- 60
Query: 61 PSQLSHPSPRSPLARPKKMLKTISQSAMTLVHKKKTGRRDERAEEEEEEDEEEEEEWGHG 120
PSP + LARPK MLKT+S SAMTL KKKT RR R EEED+EEE+EWG
Sbjct: 61 ------PSPGATLARPKNMLKTVSLSAMTLFRKKKTSRRGVR---PEEEDDEEEKEWGRV 120
Query: 121 GVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTQA 175
GVWQRGILMGDKCQPLDFPG IYYDSNGNK+NE P RSPRASPLPGYLLRK +A
Sbjct: 121 GVWQRGILMGDKCQPLDFPGVIYYDSNGNKVNEAPFRSPRASPLPGYLLRKPEA 155
BLAST of Lag0034028 vs. NCBI nr
Match: XP_022973902.1 (uncharacterized protein LOC111472519 [Cucurbita maxima]) HSP 1 Score: 189.1 bits (479), Expect = 3.2e-44 Identity = 113/174 (64.94%), Postives = 119/174 (68.39%), Query Frame = 0
Query: 1 MVFSTPERPPTPSPNSGTAAKGPSTALLRSVTALAALCAKTAARVTKKLKLKHSHDHPSH 60
M TPERP P NS T T LLRSV L LCAK AA +TKKLK K
Sbjct: 1 MASPTPERP--PFANSCTVPNSLPTGLLRSVKVLVVLCAKKAAHITKKLKWK-------- 60
Query: 61 PSQLSHPSPRSPLARPKKMLKTISQSAMTLVHKKKTGRRDERAEEEEEEDEEEEEEWGHG 120
PSP + LARPK MLKTIS SAMTL KKKT RR R EEED+EEE+EWG
Sbjct: 61 ------PSPGATLARPKDMLKTISLSAMTLFRKKKTSRRGVR---PEEEDDEEEKEWGRV 120
Query: 121 GVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTQA 175
GVWQRGILMGDKCQPLDFPG IYYDSNGNK+NE P RSPRASPLPGYLLRK +A
Sbjct: 121 GVWQRGILMGDKCQPLDFPGVIYYDSNGNKVNEAPFRSPRASPLPGYLLRKPEA 155
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN63795.1 | 6.0e-59 | 76.30 | hypothetical protein Csa_013677 [Cucumis sativus] | [more] |
| TYK28394.1 | 7.8e-59 | 76.30 | hypothetical protein E5676_scaffold629G00220 [Cucumis melo var. makuwa] | [more] |
| XP_038879173.1 | 3.0e-58 | 77.78 | uncharacterized protein LOC120071149 [Benincasa hispida] | [more] |
| XP_023531310.1 | 6.4e-45 | 65.52 | uncharacterized protein LOC111793589 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022973902.1 | 3.2e-44 | 64.94 | uncharacterized protein LOC111472519 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 95..115 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..24 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 103..117 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 147..174 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 47..120 |
| None | No IPR available | PANTHER | PTHR33237:SF26 | OS06G0499100 PROTEIN | coord: 21..168 |
| None | No IPR available | PANTHER | PTHR33237 | F2P16.13 PROTEIN-RELATED | coord: 21..168 |
Relationships
The following mRNA feature(s) are a part of this gene:
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