Lag0033996 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033996
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	40S ribosomal protein S7
Location	chr3: 3565419 .. 3567144 (-)
RNA-Seq Expression	Lag0033996
Synteny	Lag0033996

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTACGGCGAGGAAGAAGATCCACAAGGATAATAATGTTGACCCCTCAGAATTTGAGGAAACTGTTGCTCAGGTGAACTTTTAAAATATCTGCTGATTGCCAACATTGTCAGCGTTCTTTTGTTTGTCTGAACTGATTATTCTTCGTTTCATTTTAGGCATTGTTTGATTTGGAAAACACCAACTCCGAGCTTAAAAGTGATCTGAAGGATCTTTACATTAATTCTGCAATGTAAGAAGGATGTATAGATAGTTTGCATGTTTTTTAGACTTTATGTTGTTTTCTTATTAATATAAATTTTCATTATTATATTGTAGTCAAGTTGATGTTGCTGGAAACCGCAAGGCAGTTGTGGTCTATGTCCCATACAGATTGAGGAAGGCCTTCCGCAAGATTCACCTGAGGCTTGTCAGAGAGCTTGAAAAGAAATTCAGTGGAAAGGTTAGGAGAGAGCTTTTTTATATTGCTCTGGTTGGTTTTATTCTGGTGACGACTTAATTATTATATCTAGTTAGCATAAATTGTGGTTGATTACACTGATTATATCTAGATAGTATCCTCGGCAGAAGTAATTTCTTAATCCAAGTCATAATCAGCGAGTTAAACTAGTTTGGTGTTGCATATATCTTTAGGGAATGATCAGAAAAAGTACTACCAGCGGAGTTTTACTTGTTTATGTCCTCTTTTCTTCCTCCATATGCACTCAATGTTCCTTGGGGGGGGGGGTGATGTAAGCCTCAAATTAAATGAAAGAAATGGATTAAAATCATAAAAACTGTGAATCATTATTCTTGAAGTTGATGATTATCATAATAATTATTAGTTATTGATTTAAACACCATTCTAATCATCTTAATTAGTATTGGTAATAGCATTGGCTCATTCTTTTATTTGTCTTGAACCTGTTTTAAGCCTTTGTGGTAAAGTTATCAACACTCGTCCCTTGGCAGGTAATAAATTAGTGGCCTTTTATATTTTTTGAAAACAAATTTATTGTATTCTTACAGCATTTTTACGGGGGTAGGGACTAACCTTAGAGCATTCTCTCAGAGGTTTTGGCCTCTCATGATTCAAATAAGACTGCAAAGTCTATATTGTGTCGTGCAAATTTATTGACTTCGCATTTTCGTATTCTTTTTGTTTATAAACCATAGTTGTTCTATGATAGGATGTTATTCTGATTGCTACTAGAAGGATTTTGAGGCCTCCGAAGAAAGGATCAGCTGCACAGAGGCCACGTAGCCGTACTCTCACTTCTGTGCATGAGGCAATGCTAGAGGATGTTGTATTGCCTGCTGAGATTGTTGGAAAGCGTACTAGATACAGAGTTGATGGATCAAAGATCATGAAGGTACATTCAGATTATTTTGGTACTTGAGATTCTTAACATGTTCCTAATCATGGAAAGGATTATAAACTGTTTGCTGATTAAATTTTGCATGTCTTATAGATGTATTGCTAAATTATTGATAAGATCAGTGTTATAATTGCTTTATTGCCAACCAAAGCCCCGTGATGATTAACATTCTGCCTAGACAAGTGATCGATATCTTGAAAAGGATCAATTTGTATTTAATGTCCCATCTTATTTAAATTTTTATAGGTCTTCTTGGATCCTAAAGAACGAAATAACACTGAGTACAAATTGGAGAGCTTTGCTGCTGTCTACAGGAAGCTTTCTGGGAAAGACGTTGTTTTTGAGTACCCAATTACTGAGGCTTGA

mRNA sequence

ATGTTTACGGCGAGGAAGAAGATCCACAAGGATAATAATGTTGACCCCTCAGAATTTGAGGAAACTGTTGCTCAGGCATTGTTTGATTTGGAAAACACCAACTCCGAGCTTAAAAGTGATCTGAAGGATCTTTACATTAATTCTGCAATTCAAGTTGATGTTGCTGGAAACCGCAAGGCAGTTGTGGTCTATGTCCCATACAGATTGAGGAAGGCCTTCCGCAAGATTCACCTGAGGCTTGTCAGAGAGCTTGAAAAGAAATTCAGTGGAAAGGATGTTATTCTGATTGCTACTAGAAGGATTTTGAGGCCTCCGAAGAAAGGATCAGCTGCACAGAGGCCACGTAGCCGTACTCTCACTTCTGTGCATGAGGCAATGCTAGAGGATGTTGTATTGCCTGCTGAGATTGTTGGAAAGCGTACTAGATACAGAGTTGATGGATCAAAGATCATGAAGGTCTTCTTGGATCCTAAAGAACGAAATAACACTGAGTACAAATTGGAGAGCTTTGCTGCTGTCTACAGGAAGCTTTCTGGGAAAGACGTTGTTTTTGAGTACCCAATTACTGAGGCTTGA

Coding sequence (CDS)

ATGTTTACGGCGAGGAAGAAGATCCACAAGGATAATAATGTTGACCCCTCAGAATTTGAGGAAACTGTTGCTCAGGCATTGTTTGATTTGGAAAACACCAACTCCGAGCTTAAAAGTGATCTGAAGGATCTTTACATTAATTCTGCAATTCAAGTTGATGTTGCTGGAAACCGCAAGGCAGTTGTGGTCTATGTCCCATACAGATTGAGGAAGGCCTTCCGCAAGATTCACCTGAGGCTTGTCAGAGAGCTTGAAAAGAAATTCAGTGGAAAGGATGTTATTCTGATTGCTACTAGAAGGATTTTGAGGCCTCCGAAGAAAGGATCAGCTGCACAGAGGCCACGTAGCCGTACTCTCACTTCTGTGCATGAGGCAATGCTAGAGGATGTTGTATTGCCTGCTGAGATTGTTGGAAAGCGTACTAGATACAGAGTTGATGGATCAAAGATCATGAAGGTCTTCTTGGATCCTAAAGAACGAAATAACACTGAGTACAAATTGGAGAGCTTTGCTGCTGTCTACAGGAAGCTTTCTGGGAAAGACGTTGTTTTTGAGTACCCAATTACTGAGGCTTGA

Protein sequence

MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKAVVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLTSVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGKDVVFEYPITEA

Homology

[Close]

BLAST of Lag0033996 vs. NCBI nr
Match: XP_008453418.1 (PREDICTED: 40S ribosomal protein S7-like [Cucumis melo] >XP_008453419.1 PREDICTED: 40S ribosomal protein S7-like [Cucumis melo] >KAA0058086.1 40S ribosomal protein S7-like [Cucumis melo var. makuwa] >TYK28439.1 40S ribosomal protein S7-like [Cucumis melo var. makuwa])

HSP 1 Score: 359.8 bits (922), Expect = 1.5e-95
Identity = 185/191 (96.86%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKA 60
           MFTARKKIHKDN+V+PSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDV+GNRKA
Sbjct: 1   MFTARKKIHKDNDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVSGNRKA 60

Query: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120
           VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPR+RTLT
Sbjct: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120

Query: 121 SVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180
           SVHEAMLEDVVLPAEIVGKR RY+VDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK
Sbjct: 121 SVHEAMLEDVVLPAEIVGKRVRYKVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180

Query: 181 DVVFEYPITEA 192
           DVVFEYPITEA
Sbjct: 181 DVVFEYPITEA 191

[Close]

BLAST of Lag0033996 vs. NCBI nr
Match: XP_022921818.1 (40S ribosomal protein S7-1-like [Cucurbita moschata] >XP_022988619.1 40S ribosomal protein S7-1-like [Cucurbita maxima] >XP_023516454.1 40S ribosomal protein S7-1-like [Cucurbita pepo subsp. pepo] >KAG6589609.1 40S ribosomal protein S7-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023300.1 40S ribosomal protein S7-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 359.0 bits (920), Expect = 2.5e-95
Identity = 185/191 (96.86%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKA 60
           MFTARKKIHKDN VDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDV+GNRKA
Sbjct: 1   MFTARKKIHKDNGVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVSGNRKA 60

Query: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120
           VVVYVPYRLRKAFRKI+LRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPR+RTLT
Sbjct: 61  VVVYVPYRLRKAFRKIYLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120

Query: 121 SVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180
           SVHEAMLED+VLPAEIVGKR RYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK
Sbjct: 121 SVHEAMLEDIVLPAEIVGKRIRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180

Query: 181 DVVFEYPITEA 192
           DVVFEYPITEA
Sbjct: 181 DVVFEYPITEA 191

[Close]

BLAST of Lag0033996 vs. NCBI nr
Match: XP_023006574.1 (40S ribosomal protein S7-like [Cucurbita maxima] >KAG7021618.1 40S ribosomal protein S7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.1 bits (915), Expect = 9.7e-95
Identity = 184/191 (96.34%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKA 60
           MFTARKKIHKDN+ DPSEFEE+VAQALFDLENTNSELKSDLKDLYINSAIQVDV+GNRKA
Sbjct: 1   MFTARKKIHKDNDADPSEFEESVAQALFDLENTNSELKSDLKDLYINSAIQVDVSGNRKA 60

Query: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120
           VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT
Sbjct: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120

Query: 121 SVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180
           SVHEAMLEDVVLPAEIVGKR RYRVDG+KIMKV LDPKERNNTEYKLESFAAVYRKLSGK
Sbjct: 121 SVHEAMLEDVVLPAEIVGKRVRYRVDGTKIMKVLLDPKERNNTEYKLESFAAVYRKLSGK 180

Query: 181 DVVFEYPITEA 192
           DVVFEYPITEA
Sbjct: 181 DVVFEYPITEA 191

[Close]

BLAST of Lag0033996 vs. NCBI nr
Match: XP_038893482.1 (40S ribosomal protein S7 [Benincasa hispida])

HSP 1 Score: 357.1 bits (915), Expect = 9.7e-95
Identity = 183/191 (95.81%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKA 60
           M+TARKKIHKDN+ +PSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDV+GNRKA
Sbjct: 1   MYTARKKIHKDNDAEPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVSGNRKA 60

Query: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120
           VVVYVPYRLRKA+RKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSA+QRPRSRTLT
Sbjct: 61  VVVYVPYRLRKAYRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSASQRPRSRTLT 120

Query: 121 SVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180
           SVHEAMLEDVVLPAEIVGKR RYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK
Sbjct: 121 SVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180

Query: 181 DVVFEYPITEA 192
           DVVFEYPITEA
Sbjct: 181 DVVFEYPITEA 191

[Close]

BLAST of Lag0033996 vs. NCBI nr
Match: XP_004137316.1 (40S ribosomal protein S7-1 [Cucumis sativus] >XP_011648920.1 40S ribosomal protein S7-1 [Cucumis sativus] >KGN63831.1 hypothetical protein Csa_013623 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 183/191 (95.81%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKA 60
           MFTARKKIHKDN V+PSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDV+GNRKA
Sbjct: 1   MFTARKKIHKDNGVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVSGNRKA 60

Query: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120
           VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSA QRPR+RTLT
Sbjct: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSATQRPRTRTLT 120

Query: 121 SVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180
           SVHEAMLEDVVLPAEIVGKR RY+VDGSKIMKVFLDPKERNNTEYKLESF+AVYRKLSGK
Sbjct: 121 SVHEAMLEDVVLPAEIVGKRVRYKVDGSKIMKVFLDPKERNNTEYKLESFSAVYRKLSGK 180

Query: 181 DVVFEYPITEA 192
           DVVFEYPITEA
Sbjct: 181 DVVFEYPITEA 191

[Close]

BLAST of Lag0033996 vs. ExPASy Swiss-Prot
Match: Q9C514 (40S ribosomal protein S7-1 OS=Arabidopsis thaliana OX=3702 GN=RPS7A PE=2 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 9.4e-85
Identity = 155/191 (81.15%), Postives = 181/191 (94.76%), Query Frame = 0


Query: 1   MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKA 60
           MF+A+ KIHK+  V+ SE +E VAQA FDLENTN ELKS+LKDLY+NSA+QVD++G RKA
Sbjct: 1   MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60

Query: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120
           +VV VPYRLRKA+RKIH+RLVRELEKKFSGKDVILIATRRI+RPPKKGSAA+RPR+RTLT
Sbjct: 61  IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120

Query: 121 SVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180
           SVHEA+L+DVVLPAEIVGKRTRYR+DG+KIMKVFLDPKERNNTEYK+E+F+AVY+KL+GK
Sbjct: 121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180

Query: 181 DVVFEYPITEA 192
           DVVFE+PITEA
Sbjct: 181 DVVFEFPITEA 191

[Close]

BLAST of Lag0033996 vs. ExPASy Swiss-Prot
Match: Q9XH45 (40S ribosomal protein S7 OS=Brassica oleracea OX=3712 GN=RPS7 PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 3.6e-84
Identity = 153/190 (80.53%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKA 60
           MF+A+ KIHKD  V P+EFEE VAQA FDLENTN ELKSDLKDLYIN A+ +D+AGNRKA
Sbjct: 1   MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKA 60

Query: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120
           VV+YVP+RLRKAFRKIH RLVRELEKKFSG DVI +ATRRI+RPPKKGSA QRPR+RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHSRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120

Query: 121 SVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180
           SVHEAMLEDV  PAEIVGKRTRYRVDG+KIMKV+L+PKERNNTEYKLE+   VYRKL+GK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGK 180

Query: 181 DVVFEYPITE 191
           DVVFEYP+ +
Sbjct: 181 DVVFEYPVAD 190

[Close]

BLAST of Lag0033996 vs. ExPASy Swiss-Prot
Match: Q9ZNS1 (40S ribosomal protein S7 OS=Avicennia marina OX=82927 GN=RPS7 PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-83
Identity = 152/190 (80.00%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 1   MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKA 60
           M+TA +KIHKD + +P+EFEE VAQALFD ENTN E+KSDLKDLYINSA+Q+DV+G +KA
Sbjct: 1   MYTALQKIHKDKDAEPTEFEENVAQALFDFENTNQEIKSDLKDLYINSALQIDVSGGKKA 60

Query: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120
           VV++VPYRLRK+FRKIH RLVRELEKKFSGK+V+LIATRRILRPPKKGSA QRPRSRTLT
Sbjct: 61  VVIHVPYRLRKSFRKIHPRLVRELEKKFSGKEVVLIATRRILRPPKKGSAVQRPRSRTLT 120

Query: 121 SVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180
           +VH+AMLED+V PAEIVGKR RYR+DGSKIMKVFLDPK +N+TE KLE+FA VYRKLSGK
Sbjct: 121 AVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFAGVYRKLSGK 180

Query: 181 DVVFEYPITE 191
           DVVFE+P+TE
Sbjct: 181 DVVFEFPLTE 190

[Close]

BLAST of Lag0033996 vs. ExPASy Swiss-Prot
Match: Q9M885 (40S ribosomal protein S7-2 OS=Arabidopsis thaliana OX=3702 GN=RPS7B PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 8.8e-83
Identity = 151/191 (79.06%), Postives = 172/191 (90.05%), Query Frame = 0


Query: 1   MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKA 60
           M++ + KIHKD  V P+EFEE V QALFDLENTN ELKS+LKDLYIN A+Q+D++GNRKA
Sbjct: 1   MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60

Query: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120
           VV+YVP+RLRKAFRKIHLRLVRELEKKFSGKDVI +ATRRI+RPPKKGSA QRPR+RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120

Query: 121 SVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180
           SVHEAMLEDV  PAEIVGKRTRYR+DG+KIMKVFLD K +N+TEYKLE+   VYRKL+GK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180

Query: 181 DVVFEYPITEA 192
           DVVFEYP+ EA
Sbjct: 181 DVVFEYPVIEA 191

[Close]

BLAST of Lag0033996 vs. ExPASy Swiss-Prot
Match: Q9XET4 (40S ribosomal protein S7 OS=Secale cereale OX=4550 GN=RPS7 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 5.7e-82
Identity = 147/190 (77.37%), Postives = 173/190 (91.05%), Query Frame = 0


Query: 1   MFTARKKIHKDNNVDPSEFEETVAQALFDLENTNSELKSDLKDLYINSAIQVDVAGNRKA 60
           M+TARKKI KD  ++PSEFE+TVAQA FDLEN N ELKSD+KDLYIN+A Q+DVAGNRKA
Sbjct: 1   MYTARKKIQKDKGLEPSEFEDTVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKA 60

Query: 61  VVVYVPYRLRKAFRKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRSRTLT 120
           VV++VPYRLRK FRKIH+RLVRELEKKFSGKDV+++ATRRI+RPPKKGSA  RPR+RTLT
Sbjct: 61  VVIHVPYRLRKNFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLT 120

Query: 121 SVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGK 180
           +VH+ +LEDVV PAEIVGKR RYR+DGSKI+K+FLDP ERNNTEYKL++F AVYR+L GK
Sbjct: 121 AVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFTAVYRRLCGK 180

Query: 181 DVVFEYPITE 191
           DVV+EYP+ E
Sbjct: 181 DVVYEYPVAE 190

The following BLAST results are available for this feature:

BLAST of Lag0033996 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453418.1	1.5e-95	96.86	PREDICTED: 40S ribosomal protein S7-like [Cucumis melo] >XP_008453419.1 PREDICTE...	[more]
XP_022921818.1	2.5e-95	96.86	40S ribosomal protein S7-1-like [Cucurbita moschata] >XP_022988619.1 40S ribosom...	[more]
XP_023006574.1	9.7e-95	96.34	40S ribosomal protein S7-like [Cucurbita maxima] >KAG7021618.1 40S ribosomal pro...	[more]
XP_038893482.1	9.7e-95	95.81	40S ribosomal protein S7 [Benincasa hispida]	[more]
XP_004137316.1	1.3e-94	95.81	40S ribosomal protein S7-1 [Cucumis sativus] >XP_011648920.1 40S ribosomal prote...	[more]

BLAST of Lag0033996 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C514	9.4e-85	81.15	40S ribosomal protein S7-1 OS=Arabidopsis thaliana OX=3702 GN=RPS7A PE=2 SV=1	[more]
Q9XH45	3.6e-84	80.53	40S ribosomal protein S7 OS=Brassica oleracea OX=3712 GN=RPS7 PE=2 SV=1	[more]
Q9ZNS1	1.4e-83	80.00	40S ribosomal protein S7 OS=Avicennia marina OX=82927 GN=RPS7 PE=2 SV=1	[more]
Q9M885	8.8e-83	79.06	40S ribosomal protein S7-2 OS=Arabidopsis thaliana OX=3702 GN=RPS7B PE=2 SV=1	[more]
Q9XET4	5.7e-82	77.37	40S ribosomal protein S7 OS=Secale cereale OX=4550 GN=RPS7 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000554	Ribosomal protein S7e	PFAM	PF01251	Ribosomal_S7e	coord: 7..187 e-value: 5.1E-81 score: 270.8
IPR000554	Ribosomal protein S7e	PANTHER	PTHR11278	40S RIBOSOMAL PROTEIN S7	coord: 2..191
IPR000554	Ribosomal protein S7e	PROSITE	PS00948	RIBOSOMAL_S7E	coord: 79..92
None	No IPR available	PANTHER	PTHR11278:SF19	40S RIBOSOMAL PROTEIN S7	coord: 2..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0033996.1	Lag0033996.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042274	ribosomal small subunit biogenesis
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome