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Lag0033956 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATTCGTTCGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCTCGTTTCGCCAGAGCCGAGTTCCGATTGGACTCTAAGCCGACGATCGGCGTCGAATTCGCTTACCGGAATATCAAGGTCGCCGATAAGCTCATCAAAGCACAAATCTGGGACACCGCCGGCCAAGAAAGGTCACTCTTCTTCTTCCTCTCTCTCTCTCTCTCTCTTTATTATCGTTTTTCTCGATCATCAGATAAGATCGCGAGAAGAAAGAGAAAAATCAATTGAAGGCGTTTTTTGGCTTCCTCTCTGGTTTTGAATTTCATGTCTAGGTTAATTTGAGTTCAAGAACATGGCTGGAGAAATTTAAGTTCGTATTTCAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTATTTTATTTTATAATTAACTTTCAAAACTAGGGCAGGTTAACTAGTAATTAACTTTTGTTTTTTTATAAATGGCGAATTTAGCACCACGGTATATTCTTGATCAAGACTCAAGAGTAAGAGGTTTGAAACTCTCGCTTCTAAAATATTAATTAACCAAAAAAAATTATTTTTAAAATTTAGTTTGTGTGGTAAGTGAAGTGTTATGTTGATCTATTATCTAATCATATATAGAGTTCAACCAGTTAGGATAGTAGATTTCGAACTTATGATTTTTTATCAATGATATATGACTTAAAACAATTAAGCTATACTAAATTAATGTCTAATCTATGTGTTTTGAAAATGACTATCAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATGTATTATATCATTAATAGAGATTGAGGATTTGAGCATGTAACTCAATGTCAAACATTTAATTTATTTACTAAGCTAGTTATATTTACTTTTAAATGATAATACTCTAAAAAAGGATGTAGTTGATTAGATTTGTTTAGTGAAATTGATGCATGTGATAGTATAGGGATAAATGGCTTATTTTCCTTTAAAAGTTGATTATTCCTACCAATATTTTTATAAATGATATTTTTGTTTTAAGTGAGTATTGGACCATCCTCCTAATTCACAATTTTATAGTACTTTGATGTAGATACTATAAATTTTAATTTCATAAATAATTATTTAATGTCGTTGAACTCCGTATGATGTTTAAAGGATATTGGCATGGCAACCCATCAATGAGAGTGGTAGTATAGACAATTTTTCAAATTCGAGATCATAAATATTCCTTTAGGACCTTTTAAGCCGGCCTAATAAAGATGAAACCTATTAGGTCAAAGTTTTATTATTTTTTAATTTTAATTATTATTACTATTTTGAGAAATATTATGTCAAAGTTTTGGATTAAAAGGAGAGAAAATTTTGATCTTTTTGGAGGGACCCCTAAACCTAAAAAGAGAAATTAAAATTGTCCTCTAGTGATTGATTGAAGGCAAATATGTCTCCAAATTAAACAAGATGTTCCAAAAAAAAAAAAATAAGGGGAAAAAAAAGTAAATGAATAGTGTCTCAAATTTAATATTATAATTATTACTAATTGGAACTTTAATCTAAGCTATTGATTAATCCAGCTTTTCCTACCAAATTTTATTCTCTCGAGTTATGAGCCAATCTTCTACATTAAATAACAAGTTTTGATCATGTCAAGTTATAATTTCAAATTATATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTTCACGAGAGAAAATGCTACCACTACTAATATTATTTTCATAATTCAAGCCTATGTTTTAGGTTTGTTTGATTTGGAATTTTATATTCAAGACATAAAGTTGAGAGCTTGTCCAAATTAGTGGTAGACTGTTTTCTTTTTCTCTTTTTATTTTGATTTTCCTATGATGTGAAATTTGTACTAATTGACCTACATTACATGCACAAACATTTTATTAAATAGATTATAAAACTTTAATTAGAGTTGTTCCATCAAATAAGAATTAGAACTTGTACACATTATATATATTGAAAGCATGCCTTCATTAAAACAAAATTGAACCATTTTTTTTTGTTCAGTTTTGTGAGTCTTACCGAAACTTAAATTTGTAGAAATTTTGATATTATTGAAATGAAGAATTTTACAGAATTTTTCATATTATTTTTCACAAGATGAGTTAACGAAAAAATGAATGAATAATAGAAATTAAACATTCCACTCAGACTGAGGTTCAATCGGATGATATATATATATATATATCGGTTATATATCGGTTTAGAAATGAATGGACTGTTCACCTGTTTTGTATATATTTTTAACTAATCCAATGAGGATTTGACACGTAAAAACTATAAGTAAAAATCTCTGGTAAAAAGACATTAAAGAAAAATCTCTGGTAAAAAGACATTAAAGAAAAATAATGCTCTATTATTTGTCCGCAAACAAAAGCCGTATGTTCCCTCCGAAAAGGCGACAAGTTTCTGAAGGGATTTTTTTTTTTTTTTTTTTTTTTTTCCTTAAAAAAAGTTTCTTTTCAAAAAAAAAAAAAAAAAAAAAATCTAAAGTGACTTTGTCGTCCTCAAAAAAGTTTTAATAATTTGAATTATAAATTGTATAAAATATTATCTATTGTCTTAATATTTTAATACCCAATTTGTTAATAATCTTTTCTTTTTTTTTTTTTGAAAAATTCTTTCATTGTTTTCTTTGTTGAATTTTCTATCTTTTCAAACGTATTTTTGATATCTTATAATGTTTTAAAAATATGTCTACAATTAAATAAACTTGAAAGCTACGTTCTTTATTTATATATATATATATATATATTTAAAAAAATGGGCTAGATTAGAAAACAAAGAAAAATAAGTTAGTTAATAAGCATATTATGTACTAAATTACTAAAAATCCCTAGCTAAGAGCTTAATTGATATGAGACACTATAGAAGATTATGTTAAAAACATGTGACTTTTTATTATGATGTGATATTAAATTTCTGAATTTAAAAATTTAAACTGAAAATCATGTTAAAATGTGGTTTTGGTACCTTAAGTTTATTTATATTTATAATTTCGCATTGTTTTTTTTTTAGAAAAAACTATTTTAATTTCCTATGATTTTGTATGTTTTAGATTCATCCATTGTTATTGAACAACTGAACAAAAATTGTCGTGTCATCTGCTATTTACGATCATTATTCTTAAAAAAAAATTGAAATAATTACATGGATGTCCCATTTTGAGAGGCTAAATTGAAAAATGTCATACATTTTCAAATAAGGATATATGCCCTTCTTACTTCATCATCCTAGCAAAATTACCATTTTACTCTCTATATGAAAACACACATTTAAGACATTAGTGAGAGTGAGTAAGAGATATTGGAGGGAGAAATTGGAGAGAGAGCGAGGTTAGAGTAGAGAGTAAAATGATAATTTTACTCTCTGAATCTGTGTGTAACTATTGTTTTGAAAGGGTGAGACATTTATCATTTCCGCCTATTTTAGAGGGTCATCGGTACAAAAATCTCAAAAAAATTCCCAACTTGAAAAGACGAAACCTATATTTGAATCTAAATTCAATAGTTACACACAGATTCAGAGCAATTACAAGTTCTTACTATCGAGGAGCACTAGGAGCACTACTTGTGTACGACATAAGTCGAGTGTCGACATTCGAGAATGTGAAGAAGTGGCTGCGTGAACTCAGAGATTTCGGAAATCCAGACATGGTCATCTTCCTAGTTGGAAACAAATCAGATTTGAGCCATTCTCGACAAGTAGAAGAGGAACAAGGGCAAGGTTTGGCAGAGTCTGAAAACTTATTTTTCTTGGAAACTTCAGCCATGAATAATGTGAATGTGGAAGAAGCATTTCTTGAAATGGTTCGTAGAATCCATGCCATTGCTTCCCAAAAGAGCTTGGATTTGCCTACAAATATTCAAAACCTTATTGCTTTCCCAAATGGAAAAGAGATTGTTAGTGTTCATGAAGTAACTCCAACCAAACCCGGTTCACATTGTTGCTCTTTATGA ATGGCGGATTCGTTCGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCTCGTTTCGCCAGAGCCGAGTTCCGATTGGACTCTAAGCCGACGATCGGCGTCGAATTCGCTTACCGGAATATCAAGGTCGCCGATAAGCTCATCAAAGCACAAATCTGGGACACCGCCGGCCAAGAAAGATTCAGAGCAATTACAAGTTCTTACTATCGAGGAGCACTAGGAGCACTACTTGTGTACGACATAAGTCGAGTGTCGACATTCGAGAATGTGAAGAAGTGGCTGCGTGAACTCAGAGATTTCGGAAATCCAGACATGGTCATCTTCCTAGTTGGAAACAAATCAGATTTGAGCCATTCTCGACAAGTAGAAGAGGAACAAGGGCAAGGTTTGGCAGAGTCTGAAAACTTATTTTTCTTGGAAACTTCAGCCATGAATAATGTGAATGTGGAAGAAGCATTTCTTGAAATGGTTCGTAGAATCCATGCCATTGCTTCCCAAAAGAGCTTGGATTTGCCTACAAATATTCAAAACCTTATTGCTTTCCCAAATGGAAAAGAGATTGTTAGTGTTCATGAAGTAACTCCAACCAAACCCGGTTCACATTGTTGCTCTTTATGA ATGGCGGATTCGTTCGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCTCGTTTCGCCAGAGCCGAGTTCCGATTGGACTCTAAGCCGACGATCGGCGTCGAATTCGCTTACCGGAATATCAAGGTCGCCGATAAGCTCATCAAAGCACAAATCTGGGACACCGCCGGCCAAGAAAGATTCAGAGCAATTACAAGTTCTTACTATCGAGGAGCACTAGGAGCACTACTTGTGTACGACATAAGTCGAGTGTCGACATTCGAGAATGTGAAGAAGTGGCTGCGTGAACTCAGAGATTTCGGAAATCCAGACATGGTCATCTTCCTAGTTGGAAACAAATCAGATTTGAGCCATTCTCGACAAGTAGAAGAGGAACAAGGGCAAGGTTTGGCAGAGTCTGAAAACTTATTTTTCTTGGAAACTTCAGCCATGAATAATGTGAATGTGGAAGAAGCATTTCTTGAAATGGTTCGTAGAATCCATGCCATTGCTTCCCAAAAGAGCTTGGATTTGCCTACAAATATTCAAAACCTTATTGCTTTCCCAAATGGAAAAGAGATTGTTAGTGTTCATGAAGTAACTCCAACCAAACCCGGTTCACATTGTTGCTCTTTATGA MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDISRVSTFENVKKWLRELRDFGNPDMVIFLVGNKSDLSHSRQVEEEQGQGLAESENLFFLETSAMNNVNVEEAFLEMVRRIHAIASQKSLDLPTNIQNLIAFPNGKEIVSVHEVTPTKPGSHCCSL Homology
BLAST of Lag0033956 vs. NCBI nr
Match: XP_023529393.1 (ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 395.6 bits (1015), Expect = 2.8e-106 Identity = 195/218 (89.45%), Postives = 207/218 (94.95%), Query Frame = 0
BLAST of Lag0033956 vs. NCBI nr
Match: XP_023003771.1 (ras-related protein RABA6a-like [Cucurbita maxima]) HSP 1 Score: 394.4 bits (1012), Expect = 6.2e-106 Identity = 193/218 (88.53%), Postives = 207/218 (94.95%), Query Frame = 0
BLAST of Lag0033956 vs. NCBI nr
Match: KAG7021646.1 (Ras-related protein RABA6b, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 388.3 bits (996), Expect = 4.5e-104 Identity = 194/218 (88.99%), Postives = 204/218 (93.58%), Query Frame = 0
BLAST of Lag0033956 vs. NCBI nr
Match: XP_022933916.1 (ras-related protein RABA6b-like [Cucurbita moschata] >KAG6587682.1 Ras-related protein RABA6b, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 386.0 bits (990), Expect = 2.2e-103 Identity = 193/218 (88.53%), Postives = 204/218 (93.58%), Query Frame = 0
BLAST of Lag0033956 vs. NCBI nr
Match: XP_022134689.1 (ras-related protein RABA6b [Momordica charantia]) HSP 1 Score: 381.7 bits (979), Expect = 4.2e-102 Identity = 184/218 (84.40%), Postives = 204/218 (93.58%), Query Frame = 0
BLAST of Lag0033956 vs. ExPASy Swiss-Prot
Match: Q9C9U7 (Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.2e-80 Identity = 153/228 (67.11%), Postives = 180/228 (78.95%), Query Frame = 0
BLAST of Lag0033956 vs. ExPASy Swiss-Prot
Match: Q0WQN4 (Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2) HSP 1 Score: 299.7 bits (766), Expect = 2.7e-80 Identity = 151/224 (67.41%), Postives = 178/224 (79.46%), Query Frame = 0
BLAST of Lag0033956 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 3.0e-63 Identity = 123/212 (58.02%), Postives = 160/212 (75.47%), Query Frame = 0
BLAST of Lag0033956 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 5.2e-63 Identity = 122/212 (57.55%), Postives = 161/212 (75.94%), Query Frame = 0
BLAST of Lag0033956 vs. ExPASy Swiss-Prot
Match: Q9FJH0 (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.2e-62 Identity = 124/214 (57.94%), Postives = 159/214 (74.30%), Query Frame = 0
BLAST of Lag0033956 vs. ExPASy TrEMBL
Match: A0A6J1KQ67 (ras-related protein RABA6a-like OS=Cucurbita maxima OX=3661 GN=LOC111497252 PE=4 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 3.0e-106 Identity = 193/218 (88.53%), Postives = 207/218 (94.95%), Query Frame = 0
BLAST of Lag0033956 vs. ExPASy TrEMBL
Match: A0A6J1F0C2 (ras-related protein RABA6b-like OS=Cucurbita moschata OX=3662 GN=LOC111441184 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103 Identity = 193/218 (88.53%), Postives = 204/218 (93.58%), Query Frame = 0
BLAST of Lag0033956 vs. ExPASy TrEMBL
Match: A0A6J1BZG6 (ras-related protein RABA6b OS=Momordica charantia OX=3673 GN=LOC111006897 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102 Identity = 184/218 (84.40%), Postives = 204/218 (93.58%), Query Frame = 0
BLAST of Lag0033956 vs. ExPASy TrEMBL
Match: A0A0A0LS89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97 Identity = 175/218 (80.28%), Postives = 199/218 (91.28%), Query Frame = 0
BLAST of Lag0033956 vs. ExPASy TrEMBL
Match: A0A1S3BWB9 (ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 1.3e-96 Identity = 175/217 (80.65%), Postives = 196/217 (90.32%), Query Frame = 0
BLAST of Lag0033956 vs. TAIR 10
Match: AT1G73640.1 (RAB GTPase homolog A6A ) HSP 1 Score: 300.8 bits (769), Expect = 8.7e-82 Identity = 153/228 (67.11%), Postives = 180/228 (78.95%), Query Frame = 0
BLAST of Lag0033956 vs. TAIR 10
Match: AT1G18200.1 (RAB GTPase homolog A6B ) HSP 1 Score: 299.7 bits (766), Expect = 1.9e-81 Identity = 151/224 (67.41%), Postives = 178/224 (79.46%), Query Frame = 0
BLAST of Lag0033956 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C ) HSP 1 Score: 243.0 bits (619), Expect = 2.2e-64 Identity = 123/212 (58.02%), Postives = 160/212 (75.47%), Query Frame = 0
BLAST of Lag0033956 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D ) HSP 1 Score: 242.3 bits (617), Expect = 3.7e-64 Identity = 122/212 (57.55%), Postives = 161/212 (75.94%), Query Frame = 0
BLAST of Lag0033956 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F ) HSP 1 Score: 241.1 bits (614), Expect = 8.2e-64 Identity = 124/214 (57.94%), Postives = 159/214 (74.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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