Lag0033926 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033926
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	tRNA pseudouridine synthase
Location	chr3: 2993005 .. 2998827 (-)
RNA-Seq Expression	Lag0033926
Synteny	Lag0033926

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGCCCTTTTTCATCTGCTTGACTGCAACAGCCATGTGGATTTACATTCTCGTCCCTGCTGCGACGGCGGCTGCAACTGCCAAATCCGGTCGTCCGCTCAGGCACGGCGGTGGTTATGATACCATTTCCGAGGGCCAGACTTGTATCACCATCAGGTTCCAGTTTCGGTTTTAAATTTCTGATGGAGAATCGAGCTCAGGAAAAGGACTATCTTCACTATAACCACACTGATCGCTGCAGAAATGCTAGATGGACTGCCAGGTTTTTCTTTCGTGCATTTACATTATCTATCGCTTTGTTTGATTTTGAAATTTTCATCGTGGTACTTCAAATCAAATTCTGTAGCTGCGAGAGCTTCGTATTTGGTTGTAGTAATTCAATCGGAATCCGAGAAGGTAGTCAATCAAGCTTTTGTTATTCTTTTGGCAGGGAAAGCTACCAACTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCATGCTGTTAATGGAAGGTTCTCACTGTCCTCGTTGTTTGGAACTGAGGTGAGTCTCCAATATCAACGCTTTCTTTAAACTTCTTTCCTCTTTCTTTAGAATTCTTTCGTTTTTGAAATGGAAGCAGTGGAACTGTGAACTAGGACTTTTTTTCCCTTCCTTTCCAGCATGTGAATTCCTCTCTCCTGTGATGCCAAGAGTGATCTTTATATATCTAATGCGGCTTTCATCATAATGCTGTATCTGTATCTGCGTTGGATAGTTTATAGCTACCTCTTGATATTGATTTCTATGGTTACTTTCTTTGGTTTCTTCCAATGCAGTCGTGAGAGTAGTTAAAAACAATTATGAATCCTGCTCCTGCAACCTAAAATAGTTGGAAAAATAGCGAGGATAATCTATTTCTTGTACGACTTCCTAAATCCTAAGGAATCGTATTTCTTTCTAATCAGGTTCTCTGGTTCTTAAAATAATGGCTGCCATTCTTATCAAAATAATAATAATAATAATAAAATAATGGCTGCCTTCTAAGACTGCCATTTGTTTTTTCGTTTTCTTGCTTATGTTCTAAATCTTGCTTGGGTTTGCAGTTCCAGAGATGATTTTCAATCAAATCCTTGCTATCAATTGTTGGGTTTAATCTGTTAATCACGTTCATGATTCTTAAAAAAGTCCTGTTTTACAAATTCCATTGGTTGATCACAATTAGGAAATATGAGGATGAAAATTTTGTTCTTTAAATATCTTCTGTACCAAACAAGAAGATATCATGGGTATTATTTATTTATTTATTGTATATAGTACTTTATCCACAGACAGTTCATGATCACGATGATGCTGGGATTCTACCGATTTACAATGCAGCAGAGTTAAACAGAGCTTCAGTTAAAGATGGGACTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCATTTGATGGTTGGCAAAAGCAGCCAGACTTGAATACTGTTCAGGGGTAAGCTTGTTTCAGGGAAGTGTAAACCGCATGCACACGTAATATACACACACAATTGGGAGATTTTGAAGCTAGTGATGTTCTTTTCATTATAAAGTCTTTTCAATTGAAGAATTGTTAAGTATTTGTAAGTTTTAGAAATGTTTGAGAAGTAGTTCTAGAGATACAATTGGGGAATAGTTTCTATGGACAATCGAGTTCTAGGGATACAACTCAAAATCCCATGCCTCCATTTCAAGTGAAACTTTCCTCTCGTGGTCAATGTCCACATTAGGTCAAACCAATCGACCTTGCTAATCTCACCTTTCCTGTACTTTTATCTCCTTCTTCCAGTATAGTAGAGCTTAAATCAATATTTTAATATATTTTGATGTATGAATAGTTTGATTGAATCTAGAGATGCAAAGCACTCCTGTATATTAGAGAATTATGTCTACTTGTATCGTTTGTCAGCTTGGTGGAAAGATCTCTTGGGAAATTTGTAGATGAGAAGAAAGCTCAGCAGCTGAAAGATAGATGCTTACCGATAGAAGGGTGTGCTGTGGTTGCTGGGCGGACTGACAAAGGGGTGACAGCTCTGCGACAAGTTTGCTCATTCTGTATGTTAGTATTTTTTAAAGATTTTTTTGTTGACATAATTTTTTGCTTGTTTACATATTTAATTCCACAACTCTGTTTTATTTTTCTTAGATTCTATCTCATTTAAAAATGAACTTTTATATTAGAAATTTAGAATAAATTTTCTCTTGTATATTATTTCTCGACATCTTTGATAGTTGTTGATGGATAGCCATTAATTGCTTGTCACATCCGTTTTGTATAAACTCTAATTTTTCTGTGCTTCACTAAAACAATCAAATAATCCGTGAGGGTATTTCAAAGGACTTGTTAAAAGCAAGTAGTATTAAAACAGGGAGTGGTGCAGTCCCCTGAACTAAGTCAAGGAATAGCGTTCCCATAAAAGTAGCCAGAGTAAGAAACTTTGTACCATGCACACTGTATCTGAATTCGGCCAATCTTTAGATGCATATAGCTTAGAAGATTTCACCAAGATACCCATCACTGATTATTAATTCAAGTAGTTCTGCTGCCATGGAACTTGGGAGTGCCTTTGTTTTTATCCTCTGCAGGATTCCTTATCTGATGCTATATGAAAGGGGAATAATATTGAAGTTTTTGTTTGGTTTATTTCCAATCTGGGACTCAATACTAATAATAGAATTCAAGCTGAACCATGCTTCCTTTGGTTTGAGCTCTTTAACATGAATTAATACATGTGAACTTGTTTAGAGAAATGCAATTACTACATATGAAGTATTTGAGTTATTGCTATTTCTTTCCTTCTTTAGTTTCAAGTTGTCCTTGGAGGGGAAAAATGTATCTCTTTCTGACTTCACCCACTCAATTATTATTATTATTATTTTCTATTTAGAGATTCAATATCCGACTAAACTCCCATCATTTGTAGATACTTGGCGCACAGATGTTAAACCTCAAGACATTGAAGATTCCATCAATAATGCAGCTCCTGGAAAACTTCGAGCCATATCTGTTTTTCAGGTAATATTAAGGTTTTTCATGGAAATGTGTCATTGGAAAGAACGTGGTGTCCCAGTGCTTAGCTTAATATTGTTGCAGAAATAAGCTGTTGTTTATTTACCCTTCAATTTTGCTTGTCTCTAATCTTTCAGATACATCATTTACTGCTGTAGGTGTCTCGTATCTTCCATCCAAACTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTAAATGATAAAGAGAACACGGAGCCAGATTTTGCAATTGGTGAAGACGAAGAAAACTGTAAAGAAGAAAAAAATTGTTATAAAATAGAAGTTTTAAATGGTGAACGCGAGGCTGACATTATGGATAATTTGGTCCTCACTCAGGATGATGAGGAGCTTGCATCAGCTGATAAGCCTCAAACATTTAGTATAAAAAAGGTTAACCAACTACTAAGGAAAATAGAAGGGAAGTTATTGTCGTACAAGATGTTTGCACGTGACACCAAAGCATCAAGAAACGAGTGAGAATCATGAATTGAATCGGATGTTGGCGTTTTTTTAGTTATTCTATCTTCTATTTTGAGTATCATTATTCATTCTTTTTGTTTTTGTTTCAATAATTTTCTGCTCATTAAAGACAATTGAGATTTTCGTTCTTATTCTGCTAGTCACTCTTTTGAATTCTTTTATAAGAATATGAAAATGGATGAATCCAATCTGTATGCTCTTTTGTGGGATCTGTGGGTAGAAAGGGACGACGGTTTTCTCTCTCTCATAAAAATAAGGAAAAGGAGGAGAGTTGGACAGTTGAAAAGTTTAAGCATCAACATGAAATTTTCTGGTCGAGCCTCAGTTTAATTATCCACCTAGTGTAATTGACTCTTCCTTGGAACAGTTCTTTTTGGTCTTTTATCTGGTGGTTCTGGTTCCCTTTTGTACTTCTCATCCTATCGAGTTCTTTTGAGAGCAAAAAGAAAAAATATTTGGTTGTAGATATGATCAGGATAGCTAGTCGGAAGACTGACTTAACAAAGTTGGTTATACAGTTCATCAGTTGAGAACTTTTTGTTTGTGTCATCATGAGATTAATGTGCTTGTAGATATGATCAGGATAGCCAGTCTGCAGACTGACTAAATATAGTTATACAGTTTTATCAGTCAAGAACGTTTTGGTTGTGTCAACATGAGAGTAATGTGGTTGCTTGTATAGGTTTCTTTTTCCCAAATGTTTTCTTATCAATGACAGGATGACGTTCAGAACTTTCTGACATGTACTAATGACACTAATGACGACTATTCTCCTTTTCAGAGGTCCACCAACGGAGTGTTTTGTATACCATGCCCGAGCAATGGAAGCTAGATTACCATGCTTGGTATTTTCCTTCTGTCGTCCTCTTCATGCTTTCGTCCTCCTCCTTTTCTTTGATTATGTTTTCCTTCTACACTTCTCCCCTTCTTGATATCTATTTGTGGAGTTGTAACTATGAAACAACATTCTATGCTCACTCACACTAAAAAAGGAAGAAACATGTTATTTGCATTATGTTTTCCACTGGTGCAGAATATAGATAACAGAAGAAGAATCTGTGGAAAAGTGAGTGTGAACCGAGGAGACAGAAGAAATTTGCTTTGACATTATGTCATCAACATGAAGTATTTTAAAGCAAACTAGTTCAAGCGTGTCCTCAATTCAAAGCAAATTAAAATTTTATTGACCACGGTTGCACTCTCTTTAGTCAATAGCTAAAATTGGATAATCTTAGACAAATTTTGTTGATTTCCAATTTCTCTATCTCTGAATTTGAACCTGAACTTGGGAACAATGTCAAGTTGTCGACTTTAAATAGAAAATGCTTACTTGTTTACTTGGACTAATCTGTGGAACCTACACTGCAACAGATGCTCAGGTTCAAATTATATTGAACCAGTATGAAGTTTATATTGCTTTAAAGAAATTATCGTGGTAGAGGTTAGGAAATATTATGTATGGTAGTATTTTGATGTAGGTAATGACGCAATGTCAAATTCGTAGTTTAGCAAATGTTAATTTACTTATTTCTCCGTCTAAGTCTTGTGATACATCATCTGCTAATGCTTCAAATTCTCGTTCAGGATAATGTATTGGGATTCTTTTTTAAATCTTTTTCTGTCTGTCCAGAAGTTCCTTATTTGTTTGTCCACGTCTTAACACTCCAATAAAACTAGTGACGTGCTTTTGAATGTAGCTACTCCGAATTTAGGGATCTGACCAAGTGGTGGTGTTATATTGGCAGGACCAAGGAGTAGGAAGAAGTGTTATGTGTGTTGAGCTGGTTGCTAATCGCTTCTTGCGGAAGGTATCATCTCCAGGGTGACCTATGCTAAAGATTGTATTGAACTGAGCGTAAAATTGGCCTATTTAGATCATAACCTTTTCTCCAACTGCTTGAACTTTAGAGTTAACATCTTATATGTCAGCAAGGGACTTTCCCTTCAGTTTTAGCAATGTGATACAACCACAAGGTTCTTTCACGTTTAGATGGCGCTAATTATTATGTTTTCTGTTGAATCCATGTTCTTTAGGGCAGTTCAACCAATTTTAAAGGAATCTAATCATTACCTTGCAGATGGTGCGGGTGCTTGTTGCGACAGCAATTAGAGAGGCAGCTGCTGGTGCTGGAGAGGATGCGTTACTAAAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCTCCTGCGCCTCCTGATGGCCTCAGTCTCGTTGATGTAGGTTATACAGATTTTGATCCACGAAATTGCTTCATTTTAAATGACTAA

mRNA sequence

ATGGATTTGCCCTTTTTCATCTGCTTGACTGCAACAGCCATGTGGATTTACATTCTCGTCCCTGCTGCGACGGCGGCTGCAACTGCCAAATCCGGTCGTCCGCTCAGGCACGGCGGTGGTTATGATACCATTTCCGAGGGCCAGACTTGTATCACCATCAGGGAAAGCTACCAACTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCATGCTGTTAATGGAAGGTTCTCACTGTCCTCGTTGTTTGGAACTGAGACAGTTCATGATCACGATGATGCTGGGATTCTACCGATTTACAATGCAGCAGAGTTAAACAGAGCTTCAGTTAAAGATGGGACTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCATTTGATGGTTGGCAAAAGCAGCCAGACTTGAATACTGTTCAGGGCTTGGTGGAAAGATCTCTTGGGAAATTTGTAGATGAGAAGAAAGCTCAGCAGCTGAAAGATAGATGCTTACCGATAGAAGGGTGTGCTGTGGTTGCTGGGCGGACTGACAAAGGGGTGACAGCTCTGCGACAAGTTTGCTCATTCTATACTTGGCGCACAGATGTTAAACCTCAAGACATTGAAGATTCCATCAATAATGCAGCTCCTGGAAAACTTCGAGCCATATCTGTTTTTCAGGTGTCTCGTATCTTCCATCCAAACTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTAAATGATAAAGAGAACACGGAGCCAGATTTTGCAATTGGTGAAGACGAAGAAAACTGTAAAGAAGAAAAAAATTGTTATAAAATAGAAGTTTTAAATGGTGAACGCGAGGCTGACATTATGGATAATTTGGTCCTCACTCAGGATGATGAGGAGCTTGCATCAGCTGATAAGCCTCAAACATTTAGTATAAAAAAGGTTAACCAACTACTAAGGAAAATAGAAGGGAAGTTATTGTCGTACAAGATGTTTGCACGTGACACCAAAGCATCAAGAAACGAAGGTCCACCAACGGAGTGTTTTGTATACCATGCCCGAGCAATGGAAGCTAGATTACCATGCTTGGACCAAGGAGTAGGAAGAAGTGTTATGTGTGTTGAGCTGGTTGCTAATCGCTTCTTGCGGAAGATGGTGCGGGTGCTTGTTGCGACAGCAATTAGAGAGGCAGCTGCTGGTGCTGGAGAGGATGCGTTACTAAAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCTCCTGCGCCTCCTGATGGCCTCAGTCTCGTTGATGTAGGTTATACAGATTTTGATCCACGAAATTGCTTCATTTTAAATGACTAA

Coding sequence (CDS)

ATGGATTTGCCCTTTTTCATCTGCTTGACTGCAACAGCCATGTGGATTTACATTCTCGTCCCTGCTGCGACGGCGGCTGCAACTGCCAAATCCGGTCGTCCGCTCAGGCACGGCGGTGGTTATGATACCATTTCCGAGGGCCAGACTTGTATCACCATCAGGGAAAGCTACCAACTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCATGCTGTTAATGGAAGGTTCTCACTGTCCTCGTTGTTTGGAACTGAGACAGTTCATGATCACGATGATGCTGGGATTCTACCGATTTACAATGCAGCAGAGTTAAACAGAGCTTCAGTTAAAGATGGGACTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCATTTGATGGTTGGCAAAAGCAGCCAGACTTGAATACTGTTCAGGGCTTGGTGGAAAGATCTCTTGGGAAATTTGTAGATGAGAAGAAAGCTCAGCAGCTGAAAGATAGATGCTTACCGATAGAAGGGTGTGCTGTGGTTGCTGGGCGGACTGACAAAGGGGTGACAGCTCTGCGACAAGTTTGCTCATTCTATACTTGGCGCACAGATGTTAAACCTCAAGACATTGAAGATTCCATCAATAATGCAGCTCCTGGAAAACTTCGAGCCATATCTGTTTTTCAGGTGTCTCGTATCTTCCATCCAAACTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTAAATGATAAAGAGAACACGGAGCCAGATTTTGCAATTGGTGAAGACGAAGAAAACTGTAAAGAAGAAAAAAATTGTTATAAAATAGAAGTTTTAAATGGTGAACGCGAGGCTGACATTATGGATAATTTGGTCCTCACTCAGGATGATGAGGAGCTTGCATCAGCTGATAAGCCTCAAACATTTAGTATAAAAAAGGTTAACCAACTACTAAGGAAAATAGAAGGGAAGTTATTGTCGTACAAGATGTTTGCACGTGACACCAAAGCATCAAGAAACGAAGGTCCACCAACGGAGTGTTTTGTATACCATGCCCGAGCAATGGAAGCTAGATTACCATGCTTGGACCAAGGAGTAGGAAGAAGTGTTATGTGTGTTGAGCTGGTTGCTAATCGCTTCTTGCGGAAGATGGTGCGGGTGCTTGTTGCGACAGCAATTAGAGAGGCAGCTGCTGGTGCTGGAGAGGATGCGTTACTAAAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCTCCTGCGCCTCCTGATGGCCTCAGTCTCGTTGATGTAGGTTATACAGATTTTGATCCACGAAATTGCTTCATTTTAAATGACTAA

Protein sequence

MDLPFFICLTATAMWIYILVPAATAAATAKSGRPLRHGGGYDTISEGQTCITIRESYQLMYGRPWQEVLDFYSHAVNGRFSLSSLFGTETVHDHDDAGILPIYNAAELNRASVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRRYLYIFPLNDKENTEPDFAIGEDEENCKEEKNCYKIEVLNGEREADIMDNLVLTQDDEELASADKPQTFSIKKVNQLLRKIEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTDFDPRNCFILND

Homology

[Close]

BLAST of Lag0033926 vs. NCBI nr
Match: KAG7021669.1 (truA, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 732.3 bits (1889), Expect = 2.6e-207
Identity = 378/488 (77.46%), Postives = 403/488 (82.58%), Query Frame = 0


Query: 1   MDLPFFICLTATAMWIYILVPAATAAATAKSGRPLRHGGGYDTISE-------------- 60
           M L  +ICLTAT+ WIYI+VPAA AAATAK  RPLR GG    I                
Sbjct: 1   MGLLSYICLTATSTWIYIIVPAAPAAATAKYSRPLRLGGAVVMIPNPRAILLSSSGAGFG 60

Query: 61  -GQTCI------------------------TIRESYQLMYGRPWQEVLDFYSHAVNGRFS 120
            G  C+                        T RESYQ MY RPWQEVLDFYSHAVNGR S
Sbjct: 61  FGIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLS 120

Query: 121 LSSLFGTETVHDHDDAGILPIYNAAELNRASVKDGTGRWARATFKIVLSYHGNSFDGWQK 180
           LSSL GTETV DHDD  I P+ N AEL+RA VKDGTGRWARATFKIVLSYHGNSFDGWQK
Sbjct: 121 LSSL-GTETVRDHDDTEIQPVCNTAELDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQK 180

Query: 181 QPDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTW 240
           QPDLNTVQG+VE+SLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTW
Sbjct: 181 QPDLNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTW 240

Query: 241 RTDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRRYLYIFPLNDKENTEPDF 300
           RTDVKPQDIE SINNAAPGKLR +SV QVSR+FHPNFSAKWRRYLYIFPL D E  EP+F
Sbjct: 241 RTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNF 300

Query: 301 AIGEDEENCKEEKNCYKIEVLNGEREADIMDNLVLTQDDEELASADKPQTFSIKKVNQLL 360
           AI ED EN +EE++  KIE L+GE + +I++NLVL+QDDEE A A+KPQTFSI +VNQLL
Sbjct: 301 AIWEDVENSREEEHRDKIEALHGECKDEILNNLVLSQDDEEPALANKPQTFSIMRVNQLL 360

Query: 361 RKIEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVAN 420
           RK+EGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVAN
Sbjct: 361 RKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVAN 420

Query: 421 RFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTDFDP 450
           RFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYT+FDP
Sbjct: 421 RFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDP 480

[Close]

BLAST of Lag0033926 vs. NCBI nr
Match: XP_023006334.1 (uncharacterized protein LOC111499102 isoform X1 [Cucurbita maxima])

HSP 1 Score: 730.3 bits (1884), Expect = 9.9e-207
Identity = 377/487 (77.41%), Postives = 403/487 (82.75%), Query Frame = 0


Query: 6   FICLTATAMWIYILVPAATAAATAKSGRPLRHGGGYDTISE------------------- 65
           +ICLTAT+ WIYI+VPAA AAATAK  RPLR GG    +                     
Sbjct: 6   YICLTATSTWIYIIVPAAPAAATAKYCRPLRLGGAVVMLPNPRARLLSPSGAGFGFGFGF 65

Query: 66  GQTCI------------------------TIRESYQLMYGRPWQEVLDFYSHAVNGRFSL 125
           G  C+                        T RESYQLMY RPWQEVLDFYSHAVNGR SL
Sbjct: 66  GIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSL 125

Query: 126 SSLFGTETVHDHDDAGILPIYNAAELNRASVKDGTGRWARATFKIVLSYHGNSFDGWQKQ 185
           SSL  TETV DHDD  I P+ N AELNRA VKDGTGRWARATFKIVLSYHGNSFDGWQKQ
Sbjct: 126 SSL-RTETVRDHDDTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQ 185

Query: 186 PDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR 245
           P+LNTVQG+VE+SLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR
Sbjct: 186 PELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR 245

Query: 246 TDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRRYLYIFPLNDKENTEPDFA 305
           TDVKPQDIE SINNAAPGKLR +SV QVSR+FHPNFSAKWRRYLYIFPL D EN EP+FA
Sbjct: 246 TDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFA 305

Query: 306 IGEDEENCKEEKNCYKIEVLNGEREADIMDNLVLTQDDEELASADKPQTFSIKKVNQLLR 365
           I ED EN +EE+   KIEVL+GE + +I++NL+L+QDDEE ASA+KPQTFSI +VNQLLR
Sbjct: 306 ILEDVENSREEEYRDKIEVLHGECKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLLR 365

Query: 366 KIEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR 425
           K+EGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR
Sbjct: 366 KLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR 425

Query: 426 FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTDFDPR 450
           FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYT+FDP+
Sbjct: 426 FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQ 485

[Close]

BLAST of Lag0033926 vs. NCBI nr
Match: KAG6587701.1 (hypothetical protein SDJN03_16266, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 712.6 bits (1838), Expect = 2.1e-201
Identity = 356/418 (85.17%), Postives = 378/418 (90.43%), Query Frame = 0


Query: 39  GGYDTISEGQTCI-------TIRESYQLMYGRPWQEVLDFYSHAVNGRFSLSSLFGTETV 98
           GGYDT S+G T I       T RESYQ MY RPWQEVLDFYSHAVNGR SLSSL GTETV
Sbjct: 64  GGYDTKSKGYTAIIIRNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSL-GTETV 123

Query: 99  HDHDDAGILPIYNAAELNRASVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGL 158
            DHDD  I P+ N AEL+RA VKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQG+
Sbjct: 124 RDHDDTEIQPVCNTAELDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGV 183

Query: 159 VERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIE 218
           VE+SLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIE
Sbjct: 184 VEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIE 243

Query: 219 DSINNAAPGKLRAISVFQVSRIFHPNFSAKWRRYLYIFPLNDKENTEPDFAIGEDEENCK 278
            SINNAAPGKLR +SV QVSR+FHPNFSAKWRRYLYIFPL D E  EP+FAI ED EN +
Sbjct: 244 GSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSR 303

Query: 279 EEKNCYKIEVLNGEREADIMDNLVLTQDDEELASADKPQTFSIKKVNQLLRKIEGKLLSY 338
           EE++  KIE L+GE + +I++NLVL+QDDEE A A+KPQTFSI +VNQLLRK+EGKLLSY
Sbjct: 304 EEEHRDKIEALHGECKDEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSY 363

Query: 339 KMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVL 398
           KMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVL
Sbjct: 364 KMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVL 423

Query: 399 VATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTDFDPRNCFILND 450
           VATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYT+FDP+NCFILND
Sbjct: 424 VATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 480

[Close]

BLAST of Lag0033926 vs. NCBI nr
Match: XP_038878348.1 (tRNA pseudouridine synthase A [Benincasa hispida])

HSP 1 Score: 707.6 bits (1825), Expect = 6.9e-200
Identity = 349/399 (87.47%), Postives = 369/399 (92.48%), Query Frame = 0


Query: 52  TIRESYQLMYGRPWQEVLDFYSHAVNGRFSLSSLFGTETVHDHDDAGILPIYNAAELNRA 111
           T RESYQLMYGRPWQEVLDFY HAVNGRFSLSSLFGTE  HDHDDA I  IYN AELNR 
Sbjct: 47  TARESYQLMYGRPWQEVLDFYFHAVNGRFSLSSLFGTEIGHDHDDAEIPLIYNTAELNRV 106

Query: 112 SVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDR 171
           SVKD TGRWARATFKIVLSYHGNSFDGWQKQP LNTVQGLVE+SLGKFVD+KKAQ LKD+
Sbjct: 107 SVKDKTGRWARATFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDDKKAQMLKDK 166

Query: 172 CLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVS 231
           CLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDV+PQDIEDSIN AAPGKLR +SV QVS
Sbjct: 167 CLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVQPQDIEDSINRAAPGKLRTLSVSQVS 226

Query: 232 RIFHPNFSAKWRRYLYIFPLNDKENTEPDFAIGEDEENCKEEKNCYKIEVLNGER-EADI 291
           RIFHPNFSAKWRRYLYIFPLND EN EPD+AI ED E+C++E+N  KIEVLNGE  + +I
Sbjct: 227 RIFHPNFSAKWRRYLYIFPLNDGENMEPDYAIWEDVEDCRKEENYGKIEVLNGEECKDEI 286

Query: 292 MDNLVLTQDDEELASADKPQTFSIKKVNQLLRKIEGKLLSYKMFARDTKASRNEGPPTEC 351
            DNLV   +DEEL SADKPQTFSI++VNQLLRK+EGKLLSYKMFARDTKASRNEGPPTEC
Sbjct: 287 HDNLVFGPNDEELVSADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTEC 346

Query: 352 FVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLK 411
           FVYHARA+EARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALL+
Sbjct: 347 FVYHARAVEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLE 406

Query: 412 LMDATCRRATAPPAPPDGLSLVDVGYTDFDPRNCFILND 450
           LMDATCRRATAPPAPPDGLSLVDVGYT+FD +NCFILND
Sbjct: 407 LMDATCRRATAPPAPPDGLSLVDVGYTEFDSQNCFILND 445

[Close]

BLAST of Lag0033926 vs. NCBI nr
Match: XP_022933289.1 (uncharacterized protein LOC111440432 isoform X1 [Cucurbita moschata])

HSP 1 Score: 703.4 bits (1814), Expect = 1.3e-198
Identity = 348/398 (87.44%), Postives = 369/398 (92.71%), Query Frame = 0


Query: 52  TIRESYQLMYGRPWQEVLDFYSHAVNGRFSLSSLFGTETVHDHDDAGILPIYNAAELNRA 111
           T RESYQ MY RPWQEVLDFYSHAVNGR SLSSL GTETV DHDD  I P+ N AELNRA
Sbjct: 49  TSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSL-GTETVRDHDDTEIQPVCNTAELNRA 108

Query: 112 SVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDR 171
             KDGTGRWARATFKIVLSYHGNSFDGWQKQP+LNTVQG+VE+SLGKFVDEKKAQQLKDR
Sbjct: 109 PGKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDR 168

Query: 172 CLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVS 231
           CLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIE SINNAAPGKLR +SV QVS
Sbjct: 169 CLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVS 228

Query: 232 RIFHPNFSAKWRRYLYIFPLNDKENTEPDFAIGEDEENCKEEKNCYKIEVLNGEREADIM 291
           R+FHPNFSAKWRRYLYIFPL D EN EP+FAI ED EN +EE++  KIE L+GE + +I+
Sbjct: 229 RMFHPNFSAKWRRYLYIFPLKDGENMEPNFAIWEDVENIREEEHRDKIEALHGECKDEIL 288

Query: 292 DNLVLTQDDEELASADKPQTFSIKKVNQLLRKIEGKLLSYKMFARDTKASRNEGPPTECF 351
           +NLVL+QDDEE ASA+KPQTFSI +VNQLLRK+EGKLLSYKMFARDTKASRNEGPPTECF
Sbjct: 289 NNLVLSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECF 348

Query: 352 VYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKL 411
           VYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKL
Sbjct: 349 VYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKL 408

Query: 412 MDATCRRATAPPAPPDGLSLVDVGYTDFDPRNCFILND 450
           MDATCRRATAPPAPPDGLSLVDVGYT+FDP+NCFILND
Sbjct: 409 MDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 445

[Close]

BLAST of Lag0033926 vs. ExPASy Swiss-Prot
Match: B1LB83 (tRNA pseudouridine synthase A OS=Thermotoga sp. (strain RQ2) OX=126740 GN=truA PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.9e-13
Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 0


Query: 128 VLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDK 187
           V+ Y G++F G+Q QPD+ TVQG++E +L +   ++   Q              AGRTD 
Sbjct: 7   VIEYDGSNFFGYQGQPDVRTVQGVIEDALERIFKQRIYTQ-------------AAGRTDA 66

Query: 188 GVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRRYLY 247
           GV A  Q+ +F      +  +DI++++N   P  +    VF+VS+ FHP F  K R Y Y
Sbjct: 67  GVHANGQLIAFNCPNDRMTTEDIKNAMNANLPDDVYVKEVFEVSKNFHPRFDVKKRIYHY 122

Query: 248 IFPLNDKEN 257
               + ++N
Sbjct: 127 FILTSKQKN 122

[Close]

BLAST of Lag0033926 vs. ExPASy Swiss-Prot
Match: C0QZT8 (tRNA pseudouridine synthase A OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) OX=565034 GN=truA PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.0e-12
Identity = 45/123 (36.59%), Postives = 62/123 (50.41%), Query Frame = 0


Query: 126 KIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRT 185
           KI + Y G  F GWQ QP+L TVQG + +++ K   EK         + I GC    GRT
Sbjct: 5   KITIQYDGTDFYGWQIQPNLRTVQGEIYKAVQKVYGEK---------ITIYGC----GRT 64

Query: 186 DKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRRY 245
           D GV AL QV +F   +  V    +  ++N+     LR I   ++   F+   SA +R Y
Sbjct: 65  DAGVHALGQVANFRVPKMLVPINKVHIALNSYLDRDLRIIKAEEMPDSFNARASATFREY 114

Query: 246 LYI 249
           LYI
Sbjct: 125 LYI 114

[Close]

BLAST of Lag0033926 vs. ExPASy Swiss-Prot
Match: A6LLJ7 (tRNA pseudouridine synthase A OS=Thermosipho melanesiensis (strain DSM 12029 / CIP 104789 / BI429) OX=391009 GN=truA PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-11
Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 0


Query: 125 FKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 184
           F I  SY G +F G+Q QP++ TVQG +E++L +   E+   Q              AGR
Sbjct: 4   FAIEFSYDGTNFFGYQGQPNVRTVQGELEKALERIFKERIFTQ-------------GAGR 63

Query: 185 TDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRR 244
           TD GV A  QV +F      +   DI++++N   P  +     ++V + F+P F AK R 
Sbjct: 64  TDAGVHANGQVAAFNCPIDRLAAIDIKNALNANLPEDIYVKKAWEVEKNFNPRFRAKKRI 121

Query: 245 YLYIFPLNDKE 256
           Y Y+   N+K+
Sbjct: 124 YHYLVSTNEKD 121

[Close]

BLAST of Lag0033926 vs. ExPASy Swiss-Prot
Match: B3E0A0 (tRNA pseudouridine synthase A OS=Methylacidiphilum infernorum (isolate V4) OX=481448 GN=truA PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-11
Identity = 44/124 (35.48%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 125 FKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 184
           +K+ LSY G+ F GWQ+Q +L TVQ  +E ++ K  +E          +P+EG    AGR
Sbjct: 8   YKLTLSYCGSGFHGWQRQGELPTVQRALEEAVAKIWEEP---------IPVEG----AGR 67

Query: 185 TDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRR 244
           TD GV A  QV SF   R  ++P+ ++ ++N   P  +R      V R F   F A  + 
Sbjct: 68  TDAGVHAKGQVASFAAPR-KLEPEVLKRALNYHLPDTVRVWDARIVPREFSARFDAVSKT 117

Query: 245 YLYI 249
           Y Y+
Sbjct: 128 YQYL 117

[Close]

BLAST of Lag0033926 vs. ExPASy Swiss-Prot
Match: B0SC03 (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=truA PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.9e-11
Identity = 74/314 (23.57%), Postives = 116/314 (36.94%), Query Frame = 0


Query: 125 FKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 184
           + +++ Y G  F+GWQKQ +L TVQ  +E +LG  +    A +L            VAGR
Sbjct: 4   YALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAGR 63

Query: 185 TDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRR 244
           TD GV AL  VC+F T         +  S+N   P  +   +V +V   FH  FS   R 
Sbjct: 64  TDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGRE 123

Query: 245 YLYIFPLNDKENTEPDFAIGEDEENCKEEKNCYKIEVLNGEREADIMDNLVLTQDDEELA 304
           Y+Y    +  E++  +      + +   E+   +++VL GE++                 
Sbjct: 124 YIYKLYYSKYESSFVEGRAFWVKGHIDWERVKKQLQVLVGEKD----------------- 183

Query: 305 SADKPQTFSIKKVNQLLRKIEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPC 364
                                        F   TKA    G          RA+   L  
Sbjct: 184 -----------------------------FRSFTKAKSMAG---------KRAVREILAI 243

Query: 365 LDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPA 424
             + +      + + AN F+  MVR+ V T +          ++  +++   R       
Sbjct: 244 QLENLSPEWYQIRIRANGFMHNMVRITVGTLLDIGKGRWESRSIDSILEEKNRTQAGVTL 251

Query: 425 PPDGLSLVDVGYTD 439
           PPDGL  V   Y D
Sbjct: 304 PPDGLYFVRAYYED 251

[Close]

BLAST of Lag0033926 vs. ExPASy TrEMBL
Match: A0A6J1L1W3 (tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499102 PE=3 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 4.8e-207
Identity = 377/487 (77.41%), Postives = 403/487 (82.75%), Query Frame = 0


Query: 6   FICLTATAMWIYILVPAATAAATAKSGRPLRHGGGYDTISE------------------- 65
           +ICLTAT+ WIYI+VPAA AAATAK  RPLR GG    +                     
Sbjct: 6   YICLTATSTWIYIIVPAAPAAATAKYCRPLRLGGAVVMLPNPRARLLSPSGAGFGFGFGF 65

Query: 66  GQTCI------------------------TIRESYQLMYGRPWQEVLDFYSHAVNGRFSL 125
           G  C+                        T RESYQLMY RPWQEVLDFYSHAVNGR SL
Sbjct: 66  GIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSL 125

Query: 126 SSLFGTETVHDHDDAGILPIYNAAELNRASVKDGTGRWARATFKIVLSYHGNSFDGWQKQ 185
           SSL  TETV DHDD  I P+ N AELNRA VKDGTGRWARATFKIVLSYHGNSFDGWQKQ
Sbjct: 126 SSL-RTETVRDHDDTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQ 185

Query: 186 PDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR 245
           P+LNTVQG+VE+SLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR
Sbjct: 186 PELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR 245

Query: 246 TDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRRYLYIFPLNDKENTEPDFA 305
           TDVKPQDIE SINNAAPGKLR +SV QVSR+FHPNFSAKWRRYLYIFPL D EN EP+FA
Sbjct: 246 TDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFA 305

Query: 306 IGEDEENCKEEKNCYKIEVLNGEREADIMDNLVLTQDDEELASADKPQTFSIKKVNQLLR 365
           I ED EN +EE+   KIEVL+GE + +I++NL+L+QDDEE ASA+KPQTFSI +VNQLLR
Sbjct: 306 ILEDVENSREEEYRDKIEVLHGECKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLLR 365

Query: 366 KIEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR 425
           K+EGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR
Sbjct: 366 KLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR 425

Query: 426 FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTDFDPR 450
           FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYT+FDP+
Sbjct: 426 FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQ 485

[Close]

BLAST of Lag0033926 vs. ExPASy TrEMBL
Match: A0A6J1EZC2 (tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 6.3e-199
Identity = 348/398 (87.44%), Postives = 369/398 (92.71%), Query Frame = 0


Query: 52  TIRESYQLMYGRPWQEVLDFYSHAVNGRFSLSSLFGTETVHDHDDAGILPIYNAAELNRA 111
           T RESYQ MY RPWQEVLDFYSHAVNGR SLSSL GTETV DHDD  I P+ N AELNRA
Sbjct: 49  TSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSL-GTETVRDHDDTEIQPVCNTAELNRA 108

Query: 112 SVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDR 171
             KDGTGRWARATFKIVLSYHGNSFDGWQKQP+LNTVQG+VE+SLGKFVDEKKAQQLKDR
Sbjct: 109 PGKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDR 168

Query: 172 CLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVS 231
           CLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIE SINNAAPGKLR +SV QVS
Sbjct: 169 CLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVS 228

Query: 232 RIFHPNFSAKWRRYLYIFPLNDKENTEPDFAIGEDEENCKEEKNCYKIEVLNGEREADIM 291
           R+FHPNFSAKWRRYLYIFPL D EN EP+FAI ED EN +EE++  KIE L+GE + +I+
Sbjct: 229 RMFHPNFSAKWRRYLYIFPLKDGENMEPNFAIWEDVENIREEEHRDKIEALHGECKDEIL 288

Query: 292 DNLVLTQDDEELASADKPQTFSIKKVNQLLRKIEGKLLSYKMFARDTKASRNEGPPTECF 351
           +NLVL+QDDEE ASA+KPQTFSI +VNQLLRK+EGKLLSYKMFARDTKASRNEGPPTECF
Sbjct: 289 NNLVLSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECF 348

Query: 352 VYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKL 411
           VYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKL
Sbjct: 349 VYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKL 408

Query: 412 MDATCRRATAPPAPPDGLSLVDVGYTDFDPRNCFILND 450
           MDATCRRATAPPAPPDGLSLVDVGYT+FDP+NCFILND
Sbjct: 409 MDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 445

[Close]

BLAST of Lag0033926 vs. ExPASy TrEMBL
Match: A0A6J1C0W1 (tRNA pseudouridine synthase OS=Momordica charantia OX=3673 GN=LOC111007251 PE=3 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 1.4e-198
Identity = 347/400 (86.75%), Postives = 371/400 (92.75%), Query Frame = 0


Query: 52  TIRESYQLMYGRPWQEVLDFYSHAVNGRFSLSSLFGTE--TVHDHDDAGILPIYNAAELN 111
           T RESYQLMYGRPWQEVLDFY HAVNGRFS SSLFGTE  TVHDH+DA I  IYN +ELN
Sbjct: 45  TARESYQLMYGRPWQEVLDFYFHAVNGRFSPSSLFGTEVKTVHDHNDAEIPLIYNTSELN 104

Query: 112 RASVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLK 171
           RASVKD TGRWARATFKIVLSYHGNSFDGWQKQP LNTVQGLVE+SLGKFVDEKKAQ LK
Sbjct: 105 RASVKDKTGRWARATFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQLLK 164

Query: 172 DRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQ 231
           DRCLP+EGCAVVAGRTDKGVTALRQVCSFYTWRTDVKP DIEDSIN+AAP KLR +SV Q
Sbjct: 165 DRCLPLEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPLDIEDSINSAAPRKLRVLSVSQ 224

Query: 232 VSRIFHPNFSAKWRRYLYIFPLNDKENTEPDFAIGEDEENCKEEKNCYKIEVLNGEREAD 291
           VSR FHPNFSAKWRRYLYIFPL D EN EPDFAIGED ENC+EE+N  KIE LNGE + +
Sbjct: 225 VSRNFHPNFSAKWRRYLYIFPLKDGENMEPDFAIGEDAENCREEENYNKIEALNGEFKDE 284

Query: 292 IMDNLVLTQDDEELASADKPQTFSIKKVNQLLRKIEGKLLSYKMFARDTKASRNEGPPTE 351
           I+DNLVL+Q +EELAS DKPQTFS+++VN+LLRK+EGKLLSYKMFARDTKASRNEGPPTE
Sbjct: 285 ILDNLVLSQ-NEELASDDKPQTFSVRRVNRLLRKLEGKLLSYKMFARDTKASRNEGPPTE 344

Query: 352 CFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALL 411
           CF+YHARA+EARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIRE AAGAGEDALL
Sbjct: 345 CFLYHARAVEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREVAAGAGEDALL 404

Query: 412 KLMDATCRRATAPPAPPDGLSLVDVGYTDFDPRNCFILND 450
           +LMDATCRRATAPPAPPDGLSLVDVGY++FDP+NCFILND
Sbjct: 405 RLMDATCRRATAPPAPPDGLSLVDVGYSEFDPQNCFILND 443

[Close]

BLAST of Lag0033926 vs. ExPASy TrEMBL
Match: A0A6J1L1X8 (tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499102 PE=3 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 5.9e-197
Identity = 363/471 (77.07%), Postives = 387/471 (82.17%), Query Frame = 0


Query: 6   FICLTATAMWIYILVPAATAAATAKSGRPLRHGGGYDTISE------------------- 65
           +ICLTAT+ WIYI+VPAA AAATAK  RPLR GG    +                     
Sbjct: 6   YICLTATSTWIYIIVPAAPAAATAKYCRPLRLGGAVVMLPNPRARLLSPSGAGFGFGFGF 65

Query: 66  GQTCI------------------------TIRESYQLMYGRPWQEVLDFYSHAVNGRFSL 125
           G  C+                        T RESYQLMY RPWQEVLDFYSHAVNGR SL
Sbjct: 66  GIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSL 125

Query: 126 SSLFGTETVHDHDDAGILPIYNAAELNRASVKDGTGRWARATFKIVLSYHGNSFDGWQKQ 185
           SSL  TETV DHDD  I P+ N AELNRA VKDGTGRWARATFKIVLSYHGNSFDGWQKQ
Sbjct: 126 SSL-RTETVRDHDDTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQ 185

Query: 186 PDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR 245
           P+LNTVQG+VE+SLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR
Sbjct: 186 PELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR 245

Query: 246 TDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRRYLYIFPLNDKENTEPDFA 305
           TDVKPQDIE SINNAAPGKLR +SV QVSR+FHPNFSAKWRRYLYIFPL D EN EP+FA
Sbjct: 246 TDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFA 305

Query: 306 IGEDEENCKEEKNCYKIEVLNGEREADIMDNLVLTQDDEELASADKPQTFSIKKVNQLLR 365
           I ED EN +EE+   KIEVL+GE + +I++NL+L+QDDEE ASA+KPQTFSI +VNQLLR
Sbjct: 306 ILEDVENSREEEYRDKIEVLHGECKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLLR 365

Query: 366 KIEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR 425
           K+EGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR
Sbjct: 366 KLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR 425

Query: 426 FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVD 434
           FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVD
Sbjct: 426 FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVD 475

[Close]

BLAST of Lag0033926 vs. ExPASy TrEMBL
Match: A0A6J1L1X2 (tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499102 PE=3 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 5.9e-197
Identity = 363/471 (77.07%), Postives = 387/471 (82.17%), Query Frame = 0


Query: 6   FICLTATAMWIYILVPAATAAATAKSGRPLRHGGGYDTISE------------------- 65
           +ICLTAT+ WIYI+VPAA AAATAK  RPLR GG    +                     
Sbjct: 6   YICLTATSTWIYIIVPAAPAAATAKYCRPLRLGGAVVMLPNPRARLLSPSGAGFGFGFGF 65

Query: 66  GQTCI------------------------TIRESYQLMYGRPWQEVLDFYSHAVNGRFSL 125
           G  C+                        T RESYQLMY RPWQEVLDFYSHAVNGR SL
Sbjct: 66  GIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSL 125

Query: 126 SSLFGTETVHDHDDAGILPIYNAAELNRASVKDGTGRWARATFKIVLSYHGNSFDGWQKQ 185
           SSL  TETV DHDD  I P+ N AELNRA VKDGTGRWARATFKIVLSYHGNSFDGWQKQ
Sbjct: 126 SSL-RTETVRDHDDTEIQPVCNTAELNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQ 185

Query: 186 PDLNTVQGLVERSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR 245
           P+LNTVQG+VE+SLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR
Sbjct: 186 PELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWR 245

Query: 246 TDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWRRYLYIFPLNDKENTEPDFA 305
           TDVKPQDIE SINNAAPGKLR +SV QVSR+FHPNFSAKWRRYLYIFPL D EN EP+FA
Sbjct: 246 TDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFA 305

Query: 306 IGEDEENCKEEKNCYKIEVLNGEREADIMDNLVLTQDDEELASADKPQTFSIKKVNQLLR 365
           I ED EN +EE+   KIEVL+GE + +I++NL+L+QDDEE ASA+KPQTFSI +VNQLLR
Sbjct: 306 ILEDVENSREEEYRDKIEVLHGECKDEILNNLILSQDDEEPASANKPQTFSIMRVNQLLR 365

Query: 366 KIEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR 425
           K+EGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR
Sbjct: 366 KLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANR 425

Query: 426 FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVD 434
           FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVD
Sbjct: 426 FLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVD 475

[Close]

BLAST of Lag0033926 vs. TAIR 10
Match: AT5G35400.1 (Pseudouridine synthase family protein )

HSP 1 Score: 476.9 bits (1226), Expect = 1.8e-134
Identity = 247/402 (61.44%), Postives = 301/402 (74.88%), Query Frame = 0


Query: 54  RESYQLMYGRPWQEVLDFYSHAVNGRFSLSSLFGTETVHDHDDAGILPIYNAAELNRASV 113
           RE+++ MY RPWQ VLDFYS+AV G  S+ SLF  +    HDD     +   +E   ++ 
Sbjct: 23  RETFRFMYDRPWQHVLDFYSNAVEGNLSVLSLFQPKKSLVHDDGITEEMLLESEPETSTR 82

Query: 114 KDG-TGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDRC 173
           KDG +GRW R  FKIVLSY+G SFDGWQKQPDL+TVQG+VE+SLG FVDE+KAQ LK +C
Sbjct: 83  KDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEKSLGGFVDERKAQLLKKKC 142

Query: 174 LPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVSR 233
            P+EG  +VAGRTDKGV+AL QVCSFYTWR D++P  IED+IN  A GKLR +S+ +VSR
Sbjct: 143 KPLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAINKDASGKLRVVSISKVSR 202

Query: 234 IFHPNFSAKWRRYLYIFPLNDKENTEPDFAIGEDEENCKEEKNCYKIEVLNGEREADIMD 293
            FHPNFSAKWRRYLYIFPL+D    EP    GE+ EN   ++N  K +  NG    +I +
Sbjct: 203 SFHPNFSAKWRRYLYIFPLDD---AEPLRKSGENHENFIFDEN--KKKQRNGLLSEEIAE 262

Query: 294 NLVLTQDDE--------ELASADKPQTFSIKKVNQLLRKIEGKLLSYKMFARDTKASRNE 353
            +++++DDE         L   +KP  FS+ KV+QLL+ ++GK+LSYKMFARDTKA+RNE
Sbjct: 263 EVIMSEDDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSYKMFARDTKAARNE 322

Query: 354 GPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAG 413
           GPPTECF+YHARA E RL   D   GR VMCVELVANRFLRKMVRVLVAT+IREAAAGA 
Sbjct: 323 GPPTECFMYHARAAEIRLSSSDCVEGRRVMCVELVANRFLRKMVRVLVATSIREAAAGAE 382

Query: 414 EDALLKLMDATCRRATAPPAPPDGLSLVDVGYTDFDPRNCFI 447
           +DALLKL++A+CRRATAPPAP +GL L DVGYTDFDP+   I
Sbjct: 383 DDALLKLLEASCRRATAPPAPSEGLCLFDVGYTDFDPQTSLI 419

[Close]

BLAST of Lag0033926 vs. TAIR 10
Match: AT5G35400.2 (Pseudouridine synthase family protein )

HSP 1 Score: 453.4 bits (1165), Expect = 2.2e-127
Identity = 247/453 (54.53%), Postives = 301/453 (66.45%), Query Frame = 0


Query: 54  RESYQLMYGRPWQEVLDFYSHAVNGRFSLSSLFGTETVHDHDDAGILPIYNAAELNRASV 113
           RE+++ MY RPWQ VLDFYS+AV G  S+ SLF  +    HDD     +   +E   ++ 
Sbjct: 23  RETFRFMYDRPWQHVLDFYSNAVEGNLSVLSLFQPKKSLVHDDGITEEMLLESEPETSTR 82

Query: 114 KDG-TGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVDEKKAQQLKDRC 173
           KDG +GRW R  FKIVLSY+G SFDGWQKQPDL+TVQG+VE+SLG FVDE+KAQ LK +C
Sbjct: 83  KDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEKSLGGFVDERKAQLLKKKC 142

Query: 174 LPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVSR 233
            P+EG  +VAGRTDKGV+AL QVCSFYTWR D++P  IED+IN  A GKLR +S+ +VSR
Sbjct: 143 KPLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAINKDASGKLRVVSISKVSR 202

Query: 234 IFHPNFSAKWRRYLYIFPLNDKENTEPDFAIGEDEENCKEEKNCYKIEVLNGEREADIMD 293
            FHPNFSAKWRRYLYIFPL+D    EP    GE+ EN   ++N  K +  NG    +I +
Sbjct: 203 SFHPNFSAKWRRYLYIFPLDD---AEPLRKSGENHENFIFDEN--KKKQRNGLLSEEIAE 262

Query: 294 NLVLTQDDE--------ELASADKPQTFSIKKVNQLLRKIEGKLLSYKMFARDTKASRNE 353
            +++++DDE         L   +KP  FS+ KV+QLL+ ++GK+LSYKMFARDTKA+RNE
Sbjct: 263 EVIMSEDDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSYKMFARDTKAARNE 322

Query: 354 GPPTECFVYHARAMEARLP----------------------------------------- 413
           GPPTECF+YHARA E RL                                          
Sbjct: 323 GPPTECFMYHARAAEIRLSSSVVHFVAWVFGGSIVLVILATEGSTLDLTDTKLYIASWFL 382

Query: 414 ----------CLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMD 447
                       D   GR VMCVELVANRFLRKMVRVLVAT+IREAAAGA +DALLKL++
Sbjct: 383 IKRSCEFLFIASDCVEGRRVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALLKLLE 442

[Close]

BLAST of Lag0033926 vs. TAIR 10
Match: AT3G06950.1 (Pseudouridine synthase family protein )

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-08
Identity = 37/124 (29.84%), Postives = 56/124 (45.16%), Query Frame = 0


Query: 125 FKIVLSYHGNSFDGWQKQPDLNTVQGLVERSLGKFVD-EKKAQQLKDRCLPIEGCAVVAG 184
           +++V++Y G  F GWQ Q    T+Q ++E++L +  +  +K  QL           + AG
Sbjct: 43  WRLVIAYDGTRFAGWQYQESPPTIQSMLEKALIQITELGRKELQL-----------IGAG 102

Query: 185 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINNAAPGKLRAISVFQVSRIFHPNFSAKWR 244
           RTD GV A  QV  F T            ++N   P  +R   +      FH  FSA  +
Sbjct: 103 RTDAGVHAWGQVAHFVTPFNYTSLDSFHAALNGLLPKDIRVRELSAAVPEFHARFSASSK 155

Query: 245 RYLY 248
            Y Y
Sbjct: 163 VYRY 155

The following BLAST results are available for this feature:

BLAST of Lag0033926 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021669.1	2.6e-207	77.46	truA, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023006334.1	9.9e-207	77.41	uncharacterized protein LOC111499102 isoform X1 [Cucurbita maxima]	[more]
KAG6587701.1	2.1e-201	85.17	hypothetical protein SDJN03_16266, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038878348.1	6.9e-200	87.47	tRNA pseudouridine synthase A [Benincasa hispida]	[more]
XP_022933289.1	1.3e-198	87.44	uncharacterized protein LOC111440432 isoform X1 [Cucurbita moschata]	[more]

BLAST of Lag0033926 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1LB83	5.9e-13	33.33	tRNA pseudouridine synthase A OS=Thermotoga sp. (strain RQ2) OX=126740 GN=truA P...	[more]
C0QZT8	5.0e-12	36.59	tRNA pseudouridine synthase A OS=Brachyspira hyodysenteriae (strain ATCC 49526 /...	[more]
A6LLJ7	1.1e-11	33.59	tRNA pseudouridine synthase A OS=Thermosipho melanesiensis (strain DSM 12029 / C...	[more]
B3E0A0	1.5e-11	35.48	tRNA pseudouridine synthase A OS=Methylacidiphilum infernorum (isolate V4) OX=48...	[more]
B0SC03	1.9e-11	23.57	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]

BLAST of Lag0033926 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L1W3	4.8e-207	77.41	tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499102 PE=3 SV=...	[more]
A0A6J1EZC2	6.3e-199	87.44	tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 S...	[more]
A0A6J1C0W1	1.4e-198	86.75	tRNA pseudouridine synthase OS=Momordica charantia OX=3673 GN=LOC111007251 PE=3 ...	[more]
A0A6J1L1X8	5.9e-197	77.07	tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499102 PE=3 SV=...	[more]
A0A6J1L1X2	5.9e-197	77.07	tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499102 PE=3 SV=...	[more]

BLAST of Lag0033926 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35400.1	1.8e-134	61.44	Pseudouridine synthase family protein	[more]
AT5G35400.2	2.2e-127	54.53	Pseudouridine synthase family protein	[more]
AT3G06950.1	2.0e-08	29.84	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 122..240 e-value: 3.3E-23 score: 84.0
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 279..434 e-value: 1.9E-14 score: 55.6
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 363..436 e-value: 1.7E-6 score: 28.5
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 51..446
None	No IPR available	PANTHER	PTHR11142:SF10	TRNA PSEUDOURIDINE SYNTHASE	coord: 51..446
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 124..442

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0033926.1	Lag0033926.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031119	tRNA pseudouridine synthesis
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0106029	tRNA pseudouridine synthase activity
molecular_function	GO:0009982	pseudouridine synthase activity