Lag0033733 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033733
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Non-specific serine/threonine protein kinase
Location	chr3: 1448674 .. 1451796 (-)
RNA-Seq Expression	Lag0033733
Synteny	Lag0033733

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAAGGAGCTGACAAGGACAATCGGACAAAAATCAGACTGGAGTGTGGACCCCGGGGGCGAAACGGGCCAGTGGGTCAGGCCAAGACCGAAGGGGTTGGGTTTTTGGCCCGACCCACTGCTCGGCCCGCTTGCACAGGTTGAGCCTGTCCGGCTCCGTTTGGCTCGTACTACCTCTGTCCGTCCTGGTTCTGCATGGTTTGTCCCAAAACGCTTCCGGATTCCTAAAAATCCTAGGAGCATGAGCAAGTATTTATACCATTCTTCGCCACTGAAGAAGGGGACCCGAACTCTATTCTCCTCTCTCTTTTGCTCTCTAGCCCTCCTACTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGTTAGCACCACACCGATGTGCAGGTTTACTCTTTTGCAGGCCACATCTTCCCCCTCAACTACAAATTTACATGAAGGTTAGGTGAGTTTTCTCTGACCAAATTTGACCATCAACAGAATTCAAATTAGATATGAATTTAATGTGATTGTAACATGGACCCTACAATGATCTATCTAAGTCAAAAGTAAAAGGAAATCTTTATAAATGATTAGATATACACTGTATTTTTTTTTTTTAAATCACCAAACATATTTTTCCAATGACAAATAGTGAAACTTTTTTCTTTTAATTTGTCACTTTAAAGTTAAAAGTATGACACATAATTCAACCAATACTAAATAATATAAAATCTTCATGAACTCTAAGATTTGTTTTAAGTGTGTCTCAACCATTTTAACTATTTTATTAACTTTTACAACTTCTCCCATTAAAATCAAAACATAATTTTGACCCCCCAACTTACATGTTTAAAGTTTGAGAGAGTGGAGAAAAAAAAAAGAATACACGTGAATATTATTTTTCTTTACCTTCCATTCTTACTATTATTATATTACCAGACATTCATTTTAATCAAAATGAAAAAAAAAATCAAGCTAGATCTTAAAACAAACAATTCCAGTCATGCGTGTTACAACAGTAGACGATAATTGAGCTATTGTAGACAATTGTCAATAATGTTAGATTCTAAAATTTAAAACGATGAAAACATTATTGAAACCAACTCTATATTTAAGTGCATTTTATATATAATTTAGTCGTGAATTAGGTGAATAGGAAATTGCCATTCCAACACCTTCATAAATTGAAATAAAAATCATGTGAAGAAAAAGAAAAATAAATAAAAAGAGGAATCAGGTAACAGGAAAATTAGGTGAAAGGCGGGCATCAGTGAAAACTCTGGTTTATTTCTGTTCCAATAAAACCACAACTAACACTAACCCAAACCCTAACTAAAATCAATAGGGCGACCCCACATGCTTGAACCCACACGTGTCAACATATGGGCTCATGGATTCTCCGATTCGTTAATTTTACATTTTTACCCTTACCAACAGCCAAATTTCTAAATATGCCATTTTCAACCCTCTCCCCCTATTGTTCTACGGTCCCATCATTGATTAACGTTGGTTTCTTCTGTCAAAGTGAACATAGTTTAACAGTAATTGACAATTATTCTCGACCAAGAGGTCAGAAGTTCGAATCTCTCCACCTCCAAATAATAATTATCCACTGTATTTTCATAAACTTGAGTAGTTTAATAGTTGATAGGTATATATATATATACCAAATTTCTTTTTTTAGGAGAAAAAAAAGACTTTTTTTTTCTTCCTTTTTTTGTGGCCTACCTGACAAATCACGATCAAATTTCAATTTACAAGGAAATGAACAATTAGTATTTAAAAAAAAAAAAAAAAAACAATTAGTGGCCAAAAATAATAAATGCACTGTTTTTCATATGTTTTTTTTTTAATATATTAATGTGTGAAACTCATGTAAACTTTATATTTTAAAGTTCTACTCATTAAACTAAGTTACTTATATGCTTTTTCTCTAACATGAAAGGAAGATTATGCAACAGAAATTAGGTGGATCATTCTTTTAAGTAAAAGAAGTTGAACCCACACTCCAAAAAGAAATAAAATTTTCCTTTCATCAAAGTTCAAACTTTATTGAAAATTTCGATTCACTTTTATTCATAACAAGAAATTTTCTAAAAATGCAATTTTTTTTTTGTACATACGTCGTATTTGGAGACTTATTTTTATTTTAGTTTATGTATTTTAAATAGCTAAATTTATTTAATGCATTTTGATAAATCTTAAAATTAATCTATATTATTAGCTTTTTAACCTATTGTGTTTTTTTTATATTAATTATCATTATTATATTATTAGTTTTTTTAACATATATATTCCTATTGTGTTTTTTTATATTAATTATCATTATTTTTTTTGGACAAATGAATGTAGGGGAACCATTACATTCAACCAAGAGTTCAAATGTTTGAATCCCCGTACATAGACTAAAATACAAAAATATACAAATTAAAATGGTATTCTAACTACCATTTCAATAAAGCTCACCAATTTATATTTTTATTAACCTAGTATCCTATATTAGTGTGTGTCAATTAAGATAGTTCAACAATTACTGACATATAATGGAATCCAGAGTCTTTAATCTCCTATTCAAAATGTTGTTGAACTAAAAAACACCGTCAGTCGTGGCTAGCCGTTGGCAAATACCTAAAGAGGGATAGAATCGTAATAATGCAGAATTCTGTGGGCGGTTTTAAAGCGCGGGCCCTGAACTAGGGGGCCCACAACTATGGCCCATTTCTTTGGCCGATGGGGCCATTGAAAAAGCCATGACGTCAAAACTGGCAAATAGGAGAATCAACCGCCATGATTCTGACACCTGCTTCAAAATCAAGATCCAATAACAACCGTCCGATTATTTCTCCAGTACCAGGGGACAAAAAGGTAATTTCAGAATATCTCCCGTTGCTATAAAAGGAGCAAGAAGATGCAGAGAATCAAAGGGACGAGGAAGCGAACTTCCGCCGGTGATCGGTGCTCTTTGAAAAAACCCTTAGAAAAGGAAAGGTTTCAGTGACTGATCTTGCAGAGAAGGCGCCCTCTTAGGGAATGCAGAGAGATGAGAGGAGCTTTGTTGACGAGTTTCATCTCTAGTGGTCGAGCTGGCAAGTGCATCGGCGGCCGGAACTGTCACCGGAAACACGTCGAAGACGGGTGA

mRNA sequence

ATGTACAAGGAGCTGACAAGGACAATCGGACAAAAATCAGACTGGAGTGTGGACCCCGGGGGCGAAACGGGCCAGTGGGTCAGGCCAAGACCGAAGGGGTTGGGTTTTTGGCCCGACCCACTGCTCGGCCCGCTTGCACAGGTTGAGCCTGTCCGGCTCCGTTTGGCTCGTACTACCTCTGTCCGTCCTGGTTCTGCATGGTTTGTCCCAAAACGCTTCCGGATTCCTAAAAATCCTAGGAGCATGAGCAAGTATTTATACCATTCTTCGCCACTGAAGAAGGGGACCCGAACTCTATTCTCCTCTCTCTTTTGCTCTCTAGCCCTCCTACTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGTTAGCACCACACCGATGTGCAGGTTTACTCTTTTGCAGGCCACATCTTCCCCCTCAACTACAAATTTACATGAAGGAGAATCAACCGCCATGATTCTGACACCTGCTTCAAAATCAAGATCCAATAACAACCGTCCGATTATTTCTCCAGTACCAGGGGACAAAAAGAGAAGGCGCCCTCTTAGGGAATGCAGAGAGATGAGAGGAGCTTTGTTGACGAGTTTCATCTCTAGTGGTCGAGCTGGCAAGTGCATCGGCGGCCGGAACTGTCACCGGAAACACGTCGAAGACGGGTGA

Coding sequence (CDS)

ATGTACAAGGAGCTGACAAGGACAATCGGACAAAAATCAGACTGGAGTGTGGACCCCGGGGGCGAAACGGGCCAGTGGGTCAGGCCAAGACCGAAGGGGTTGGGTTTTTGGCCCGACCCACTGCTCGGCCCGCTTGCACAGGTTGAGCCTGTCCGGCTCCGTTTGGCTCGTACTACCTCTGTCCGTCCTGGTTCTGCATGGTTTGTCCCAAAACGCTTCCGGATTCCTAAAAATCCTAGGAGCATGAGCAAGTATTTATACCATTCTTCGCCACTGAAGAAGGGGACCCGAACTCTATTCTCCTCTCTCTTTTGCTCTCTAGCCCTCCTACTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGTTAGCACCACACCGATGTGCAGGTTTACTCTTTTGCAGGCCACATCTTCCCCCTCAACTACAAATTTACATGAAGGAGAATCAACCGCCATGATTCTGACACCTGCTTCAAAATCAAGATCCAATAACAACCGTCCGATTATTTCTCCAGTACCAGGGGACAAAAAGAGAAGGCGCCCTCTTAGGGAATGCAGAGAGATGAGAGGAGCTTTGTTGACGAGTTTCATCTCTAGTGGTCGAGCTGGCAAGTGCATCGGCGGCCGGAACTGTCACCGGAAACACGTCGAAGACGGGTGA

Protein sequence

MYKELTRTIGQKSDWSVDPGGETGQWVRPRPKGLGFWPDPLLGPLAQVEPVRLRLARTTSVRPGSAWFVPKRFRIPKNPRSMSKYLYHSSPLKKGTRTLFSSLFCSLALLLPFSDLSIGGGVVSTTPMCRFTLLQATSSPSTTNLHEGESTAMILTPASKSRSNNNRPIISPVPGDKKRRRPLRECREMRGALLTSFISSGRAGKCIGGRNCHRKHVEDG

Homology

[Close]

BLAST of Lag0033733 vs. NCBI nr
Match: KGN65247.1 (hypothetical protein Csa_019669 [Cucumis sativus])

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-09
Identity = 48/93 (51.61%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 142 TTNLHEGESTAMILTPASK--------------SRSNNNRPIISPVPGDKKRRRPLRECR 201
           T+ L    STAMILTP+                 R  N R     +    +RR  LRECR
Sbjct: 2   TSKLGMAGSTAMILTPSHPRDLLLTVRLFLQYLRRKINPRKEKLQLAVRFERRLSLRECR 61

Query: 202 EMRGALLTSFISSGRAGKCIGGRNCHRKHVEDG 221
           EMRG   TSFISSGRAG  IGGRNCHRKHVEDG
Sbjct: 62  EMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94

[Close]

BLAST of Lag0033733 vs. NCBI nr
Match: KAF4370465.1 (hypothetical protein F8388_016202, partial [Cannabis sativa])

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-04
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 188 EMRGALLTSF-ISSGRAGKCIGGRNCHRKHVEDG 221
           EMRGALL S  IS GR+ KCIGGRNCHRKHVEDG
Sbjct: 1   EMRGALLRSTEISFGRSKKCIGGRNCHRKHVEDG 34

[Close]

BLAST of Lag0033733 vs. ExPASy TrEMBL
Match: A0A0A0LWM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269890 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.0e-10
Identity = 48/93 (51.61%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 142 TTNLHEGESTAMILTPASK--------------SRSNNNRPIISPVPGDKKRRRPLRECR 201
           T+ L    STAMILTP+                 R  N R     +    +RR  LRECR
Sbjct: 2   TSKLGMAGSTAMILTPSHPRDLLLTVRLFLQYLRRKINPRKEKLQLAVRFERRLSLRECR 61

Query: 202 EMRGALLTSFISSGRAGKCIGGRNCHRKHVEDG 221
           EMRG   TSFISSGRAG  IGGRNCHRKHVEDG
Sbjct: 62  EMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94

[Close]

BLAST of Lag0033733 vs. ExPASy TrEMBL
Match: A0A7J6FIK9 (Non-specific serine/threonine protein kinase OS=Cannabis sativa OX=3483 GN=F8388_016202 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-04
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 188 EMRGALLTSF-ISSGRAGKCIGGRNCHRKHVEDG 221
           EMRGALL S  IS GR+ KCIGGRNCHRKHVEDG
Sbjct: 1   EMRGALLRSTEISFGRSKKCIGGRNCHRKHVEDG 34

The following BLAST results are available for this feature:

BLAST of Lag0033733 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65247.1	1.4e-09	51.61	hypothetical protein Csa_019669 [Cucumis sativus]	[more]
KAF4370465.1	3.1e-04	82.35	hypothetical protein F8388_016202, partial [Cannabis sativa]	[more]

BLAST of Lag0033733 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0033733 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWM6	7.0e-10	51.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269890 PE=4 SV=1	[more]
A0A7J6FIK9	1.5e-04	82.35	Non-specific serine/threonine protein kinase OS=Cannabis sativa OX=3483 GN=F8388...	[more]

BLAST of Lag0033733 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0033733.1	Lag0033733.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007165	signal transduction
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0106310	protein serine kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004712	protein serine/threonine/tyrosine kinase activity