Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCAGGTTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAAAAGTTTGCCAATGTGCACAAGATCTTTGGGGCAAGCAATGTGACAAAGCTGCTCAATGAGCTTTTGCCTCACCAAAGAGAGGATGCAGTCAACTCTCTAGCCTACGAGGCCGAGGCCCGAGTCCGAGACCCGGTCTACGGTTGCGTCGGAGCCATCTCGTTCCTCCAAAGGCAAGTCCAGAGGCTCCAGAAGGAACTCGATGCTGCGAATGCCGACCTAATTCGGTATGCATGCAACGAGATCCCTAACGCCGGGGTGAGTCATGTGGTTCAGCCAATAACCGGCCTTCGCCCTAGGGCTTTGGATCAGTATAATACAAGAGTTCTTGGCAATGAAGGTTCATCAACTGGATATTTTAACCAACACCTTCCTGCCTTCCCCATGGCTTATCCACTCCCTTGGAATGAACACTCTTCTGGAAATAACATCAATGAAGAAGGAGGGGATGCCAATATTTGA
mRNA sequence
ATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCAGGTTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAAAAGTTTGCCAATGTGCACAAGATCTTTGGGGCAAGCAATGTGACAAAGCTGCTCAATGAGCTTTTGCCTCACCAAAGAGAGGATGCAGTCAACTCTCTAGCCTACGAGGCCGAGGCCCGAGTCCGAGACCCGGTCTACGGTTGCGTCGGAGCCATCTCGTTCCTCCAAAGGCAAGTCCAGAGGCTCCAGAAGGAACTCGATGCTGCGAATGCCGACCTAATTCGGTATGCATGCAACGAGATCCCTAACGCCGGGGTGAGTCATGTGGTTCAGCCAATAACCGGCCTTCGCCCTAGGGCTTTGGATCAGTATAATACAAGAGTTCTTGGCAATGAAGGTTCATCAACTGGATATTTTAACCAACACCTTCCTGCCTTCCCCATGGCTTATCCACTCCCTTGGAATGAACACTCTTCTGGAAATAACATCAATGAAGAAGGAGGGGATGCCAATATTTGA
Coding sequence (CDS)
ATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCAGGTTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAAAAGTTTGCCAATGTGCACAAGATCTTTGGGGCAAGCAATGTGACAAAGCTGCTCAATGAGCTTTTGCCTCACCAAAGAGAGGATGCAGTCAACTCTCTAGCCTACGAGGCCGAGGCCCGAGTCCGAGACCCGGTCTACGGTTGCGTCGGAGCCATCTCGTTCCTCCAAAGGCAAGTCCAGAGGCTCCAGAAGGAACTCGATGCTGCGAATGCCGACCTAATTCGGTATGCATGCAACGAGATCCCTAACGCCGGGGTGAGTCATGTGGTTCAGCCAATAACCGGCCTTCGCCCTAGGGCTTTGGATCAGTATAATACAAGAGTTCTTGGCAATGAAGGTTCATCAACTGGATATTTTAACCAACACCTTCCTGCCTTCCCCATGGCTTATCCACTCCCTTGGAATGAACACTCTTCTGGAAATAACATCAATGAAGAAGGAGGGGATGCCAATATTTGA
Protein sequence
MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPNAGVSHVVQPITGLRPRALDQYNTRVLGNEGSSTGYFNQHLPAFPMAYPLPWNEHSSGNNINEEGGDANI
Homology
BLAST of Lag0033685 vs. NCBI nr
Match:
XP_023530763.1 (protein LATERAL ORGAN BOUNDARIES-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 357.1 bits (915), Expect = 9.6e-95
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0
Query: 1 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 108 MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 167
Query: 61 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 168 HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 227
Query: 121 AGVSHVVQPITGLRPRALDQYNTRVLGNEGSSTGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
G SHVVQPI LRPRALDQY+TR+LGNEGSS+GY+NQH PAFPM YPLPWNE+SSGNNI
Sbjct: 228 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 287
Query: 181 NEEGGDANI 190
NE G D NI
Sbjct: 288 NEGGRDDNI 296
BLAST of Lag0033685 vs. NCBI nr
Match:
KAG6587450.1 (Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 357.1 bits (915), Expect = 9.6e-95
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0
Query: 1 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 16 MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 75
Query: 61 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 76 HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 135
Query: 121 AGVSHVVQPITGLRPRALDQYNTRVLGNEGSSTGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
G SHVVQPI LRPRALDQY+TR+LGNEGSS+GY+NQH PAFPM YPLPWNE+SSGNNI
Sbjct: 136 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 195
Query: 181 NEEGGDANI 190
NE G D NI
Sbjct: 196 NEGGRDDNI 204
BLAST of Lag0033685 vs. NCBI nr
Match:
XP_023530764.1 (protein LATERAL ORGAN BOUNDARIES-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 357.1 bits (915), Expect = 9.6e-95
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0
Query: 1 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1 MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
Query: 61 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 61 HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 120
Query: 121 AGVSHVVQPITGLRPRALDQYNTRVLGNEGSSTGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
G SHVVQPI LRPRALDQY+TR+LGNEGSS+GY+NQH PAFPM YPLPWNE+SSGNNI
Sbjct: 121 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 180
Query: 181 NEEGGDANI 190
NE G D NI
Sbjct: 181 NEGGRDDNI 189
BLAST of Lag0033685 vs. NCBI nr
Match:
XP_022931903.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata])
HSP 1 Score: 357.1 bits (915), Expect = 9.6e-95
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0
Query: 1 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 108 MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 167
Query: 61 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 168 HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 227
Query: 121 AGVSHVVQPITGLRPRALDQYNTRVLGNEGSSTGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
G SHVVQPI LRPRALDQY+TR+LGNEGSS+GY+NQH PAFPM YPLPWNE+SSGNNI
Sbjct: 228 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 287
Query: 181 NEEGGDANI 190
NE G D NI
Sbjct: 288 NEGGRDDNI 296
BLAST of Lag0033685 vs. NCBI nr
Match:
KAG7021433.1 (Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 354.8 bits (909), Expect = 4.7e-94
Identity = 167/189 (88.36%), Postives = 175/189 (92.59%), Query Frame = 0
Query: 1 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 16 MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 75
Query: 61 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP+
Sbjct: 76 HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 135
Query: 121 AGVSHVVQPITGLRPRALDQYNTRVLGNEGSSTGYFNQHLPAFPMAYPLPWNEHSSGNNI 180
G SHVVQPI LRPRALDQY+TR+LGNEGSS+GY+NQH PAFPM YPLPWNE+SSG NI
Sbjct: 136 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGTNI 195
Query: 181 NEEGGDANI 190
NE G D NI
Sbjct: 196 NEGGRDDNI 204
BLAST of Lag0033685 vs. ExPASy Swiss-Prot
Match:
Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 4.8e-57
Identity = 108/134 (80.60%), Postives = 115/134 (85.82%), Query Frame = 0
Query: 2 ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
+SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3 SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62
Query: 62 QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPNA 121
QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL Y +
Sbjct: 63 QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122
Query: 122 GVSHVVQPITGLRP 136
+VV + +P
Sbjct: 123 APGNVVDLVFQPQP 136
BLAST of Lag0033685 vs. ExPASy Swiss-Prot
Match:
Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)
HSP 1 Score: 189.5 bits (480), Expect = 3.5e-47
Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0
Query: 4 SSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63
S+ NSPCAACKFLRRKC C+FAPYFPPEEP KFANVH+IFGASNV+K+L+E+ PHQR
Sbjct: 33 SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92
Query: 64 EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYA 115
EDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQ+EL+ NADL+RYA
Sbjct: 93 EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143
BLAST of Lag0033685 vs. ExPASy Swiss-Prot
Match:
O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 1.6e-44
Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 0
Query: 3 SSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQ 62
+SSS NSPCAACKFLRRKC P C+FAPYFPP++PQKFANVHK+FGASNVTKLLNEL P Q
Sbjct: 2 ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61
Query: 63 REDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRY 114
REDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+++LQ +L A ++L +Y
Sbjct: 62 REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112
BLAST of Lag0033685 vs. ExPASy Swiss-Prot
Match:
Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 1.7e-41
Identity = 85/159 (53.46%), Postives = 106/159 (66.67%), Query Frame = 0
Query: 9 SPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVN 68
SPCAACKFLRRKC P C+FAPYFPP+ PQKF +VH++FGASNVTKLLNEL P QREDAVN
Sbjct: 32 SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVN 91
Query: 69 SLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPNA-----GV 128
SLAYEA+ R+RDPVYGCVG IS LQ +++LQ++L A +L +Y +A G
Sbjct: 92 SLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGP 151
Query: 129 SHVVQPITGLRPRALDQY----NTRVLGNEGSSTGYFNQ 159
+ + I P + ++ LG+ G S F Q
Sbjct: 152 QAMAEFIGNAMPNGAHNFINIGHSAALGSLGGSASVFGQ 190
BLAST of Lag0033685 vs. ExPASy Swiss-Prot
Match:
A1YKY7 (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1)
HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40
Identity = 84/168 (50.00%), Postives = 109/168 (64.88%), Query Frame = 0
Query: 1 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
+A SPCAACKFLRRKC P C+FAPYFPP+ PQKF VH++FGASNVTKL+NE+ P
Sbjct: 24 LAGVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHP 83
Query: 61 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120
QREDA+NSLAYEA+ R+RDPVYGCVG IS LQ +++LQ++L A +L +Y +
Sbjct: 84 LQREDAMNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAAS 143
Query: 121 A-----GVSHVVQPITGLRPRA-----LDQYNTRVLGNEGSSTGYFNQ 159
A G + + I P ++ ++ LG+ G ST F Q
Sbjct: 144 ASTAPTGPQAMAEFIGSAMPNGAAHNFINLGHSAALGSLGGSTAMFGQ 191
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023530763.1 | 9.6e-95 | 88.89 | protein LATERAL ORGAN BOUNDARIES-like isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
KAG6587450.1 | 9.6e-95 | 88.89 | Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia... | [more] |
XP_023530764.1 | 9.6e-95 | 88.89 | protein LATERAL ORGAN BOUNDARIES-like isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
XP_022931903.1 | 9.6e-95 | 88.89 | protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata] | [more] |
KAG7021433.1 | 4.7e-94 | 88.36 | Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. argyros... | [more] |
Match Name | E-value | Identity | Description | |
Q9FML4 | 4.8e-57 | 80.60 | Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=... | [more] |
Q8L8Q3 | 3.5e-47 | 79.28 | LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S... | [more] |
O04479 | 1.6e-44 | 74.77 | Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1 | [more] |
Q32SG3 | 1.7e-41 | 53.46 | LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1 | [more] |
A1YKY7 | 1.1e-40 | 50.00 | Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1 | [more] |