Lag0033679 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0033679
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr3: 1037979 .. 1038707 (-)
RNA-Seq ExpressionLag0033679
SyntenyLag0033679
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTCTGACCATGACTTCGGTTTATGGTGTGTTGGTTGTTGGGCGATGTGGAATGATCGTAATGCAGCTCGAGGGGGCCGAATGATTCCGGATATTCCGATTAAACGTTCATGGATTGAGAATTATCTGGCTGAGTTTCTTTCGATGCAGGATCGTGGTCAAACTAATCGGGTTGTTCCGAGAGCTCAGCGTGTGGTTTCTGGTTTACGATGGGAATGTCCTCCGTTGGGATGTGTTAAATTAAATGTGGATGCTTCTTGTTCTTCCAAGTTTCATAAGACAGGTATTGGAATTGTTCTTCGTACTGCGTCTGGTCGTCTCCATGCGGCTCAAACGGAGGTTTTTTCTGTTGTTTATAGTCCCCCAGTTGCTGAAGCTTTGGCTATTCTTGTCGGTCTCCGACTGGTTAGGACGCTGGGTCTGGCTCGTGTTGAAGTGGAGTCTGATTGTCTTCATCTTATTTCCATGTTGAATGGTTCTGGAATTTCTTACCATGAAGACGGCACTCTGGTAGAAGAGATTTTGGTGCTAGCTTCTTTGTTTAAGCAGGTGGTGTTTCGTCATGTTCTTCGAGAAAGAAACCATCCAGCTCATTGTTTGGCATCTCATGCTTGTGCTATGGGTTCTTTTTTGTGGAGTTCTAATTTCCCTCAATGGGTGACAAAACTTGTGTTGCAGGATTTCCCTTCTGCTTTGTGTAGCCACTACTACAAAAACGGACTTTAA

mRNA sequence

ATGCTTTCTGACCATGACTTCGGTTTATGGTGTGTTGGTTGTTGGGCGATGTGGAATGATCGTAATGCAGCTCGAGGGGGCCGAATGATTCCGGATATTCCGATTAAACGTTCATGGATTGAGAATTATCTGGCTGAGTTTCTTTCGATGCAGGATCGTGGTCAAACTAATCGGGTTGTTCCGAGAGCTCAGCGTGTGGTTTCTGGTTTACGATGGGAATGTCCTCCGTTGGGATGTGTTAAATTAAATGTGGATGCTTCTTGTTCTTCCAAGTTTCATAAGACAGGTATTGGAATTGTTCTTCGTACTGCGTCTGGTCGTCTCCATGCGGCTCAAACGGAGGTTTTTTCTGTTGTTTATAGTCCCCCAGTTGCTGAAGCTTTGGCTATTCTTGTCGGTCTCCGACTGGTTAGGACGCTGGGTCTGGCTCGTGTTGAAGTGGAGTCTGATTGTCTTCATCTTATTTCCATGTTGAATGGTTCTGGAATTTCTTACCATGAAGACGGCACTCTGGTAGAAGAGATTTTGGTGCTAGCTTCTTTGTTTAAGCAGGTGGTGTTTCGTCATGTTCTTCGAGAAAGAAACCATCCAGCTCATTGTTTGGCATCTCATGCTTGTGCTATGGGTTCTTTTTTGTGGAGTTCTAATTTCCCTCAATGGGTGACAAAACTTGTGTTGCAGGATTTCCCTTCTGCTTTGTGTAGCCACTACTACAAAAACGGACTTTAA

Coding sequence (CDS)

ATGCTTTCTGACCATGACTTCGGTTTATGGTGTGTTGGTTGTTGGGCGATGTGGAATGATCGTAATGCAGCTCGAGGGGGCCGAATGATTCCGGATATTCCGATTAAACGTTCATGGATTGAGAATTATCTGGCTGAGTTTCTTTCGATGCAGGATCGTGGTCAAACTAATCGGGTTGTTCCGAGAGCTCAGCGTGTGGTTTCTGGTTTACGATGGGAATGTCCTCCGTTGGGATGTGTTAAATTAAATGTGGATGCTTCTTGTTCTTCCAAGTTTCATAAGACAGGTATTGGAATTGTTCTTCGTACTGCGTCTGGTCGTCTCCATGCGGCTCAAACGGAGGTTTTTTCTGTTGTTTATAGTCCCCCAGTTGCTGAAGCTTTGGCTATTCTTGTCGGTCTCCGACTGGTTAGGACGCTGGGTCTGGCTCGTGTTGAAGTGGAGTCTGATTGTCTTCATCTTATTTCCATGTTGAATGGTTCTGGAATTTCTTACCATGAAGACGGCACTCTGGTAGAAGAGATTTTGGTGCTAGCTTCTTTGTTTAAGCAGGTGGTGTTTCGTCATGTTCTTCGAGAAAGAAACCATCCAGCTCATTGTTTGGCATCTCATGCTTGTGCTATGGGTTCTTTTTTGTGGAGTTCTAATTTCCCTCAATGGGTGACAAAACTTGTGTTGCAGGATTTCCCTTCTGCTTTGTGTAGCCACTACTACAAAAACGGACTTTAA

Protein sequence

MLSDHDFGLWCVGCWAMWNDRNAARGGRMIPDIPIKRSWIENYLAEFLSMQDRGQTNRVVPRAQRVVSGLRWECPPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFSVVYSPPVAEALAILVGLRLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILVLASLFKQVVFRHVLRERNHPAHCLASHACAMGSFLWSSNFPQWVTKLVLQDFPSALCSHYYKNGL
Homology
BLAST of Lag0033679 vs. NCBI nr
Match: XP_042974894.1 (uncharacterized protein LOC122306534 [Carya illinoinensis])

HSP 1 Score: 111.7 bits (278), Expect = 9.0e-21
Identity = 68/227 (29.96%), Postives = 113/227 (49.78%), Query Frame = 0

Query: 3   SDHDFGLWCVGCWAMWNDRNAARGGRMIPDIPIKRSWIENYLAEFLSMQDRGQTNRVVPR 62
           ++ D   +    W +W  RN               S   +  +EF  +Q   + NR +P+
Sbjct: 544 NEEDLMKFIAMAWGLWYKRNKFIYDNSSLQFSSVLSTALSMQSEFKQVQILNKGNRELPK 603

Query: 63  AQRVVSGLRWECPPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFSVVYSP 122
                  L W+ PP G +K+N+D +    F+K G+G+VLR  +GR+  A ++    V +P
Sbjct: 604 V------LSWKPPPEGSLKINIDGAIFDDFNKAGVGVVLRDQAGRVLVACSKSEPAVPNP 663

Query: 123 PVAEALAILVGLRLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILVLASLF 182
            + EA A+L GL+     G ++V +E+DCL L+  LN    +  E   ++ EI  L   F
Sbjct: 664 EIIEATAMLRGLQFGLQWGTSKVLMETDCLFLVKALNSHSENLTEFAYVLAEIKRLMLYF 723

Query: 183 KQVVFRHVLRERNHPAHCLASHACAMGSFL-WSSNFPQWVTKLVLQD 229
           +++ F HV R+ N+ AHCLA +A  +   + W    P +V++ V  D
Sbjct: 724 QEISFVHVSRQGNNVAHCLAKYARNVDDVITWWDECPSFVSQAVWLD 764

BLAST of Lag0033679 vs. NCBI nr
Match: XP_023903785.1 (uncharacterized protein LOC112015598 [Quercus suber])

HSP 1 Score: 109.0 bits (271), Expect = 5.8e-20
Identity = 69/227 (30.40%), Postives = 106/227 (46.70%), Query Frame = 0

Query: 3    SDHDFGLWCVGCWAMWNDRNAARGGRMIPDIPIKRSWIENYLAEFLSMQDRGQTNRVVPR 62
            +  D  L+    W +W  RN  R  +         +  + Y+AEF  +  +       PR
Sbjct: 1042 NQRDLELFFTSAWLIWTQRNLLRLNKASISSHQIVATAKEYIAEFTQINPKPSP----PR 1101

Query: 63   AQRVVSGLRWECPPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFSVVYSP 122
             +   S  RW  P  G VK+N D + S + +K+GIG+V+R  +G + A+ TE    +Y+ 
Sbjct: 1102 VKANHSQTRWRPPTHGLVKINYDGATSKEQNKSGIGVVIRDENGMVLASMTEQLPQLYTA 1161

Query: 123  PVAEALAILVGLRLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILVLASLF 182
               EA+     L     +G     +E+D L L + L  +      DG L+E+I   AS F
Sbjct: 1162 LQIEAMVASTALSFAAQVGFHSGILETDSLALATALIKNSTYLSTDGLLMEDIRFNASFF 1221

Query: 183  KQVVFRHVLRERNHPAHCLASHACAMGSFL-WSSNFPQWVTKLVLQD 229
             Q+++ HV RE N  AH LA HA  +  FL W  + P  +  +V  D
Sbjct: 1222 NQLLYSHVKREGNKVAHKLARHALCIPVFLAWMEDVPPPIRSVVQDD 1264

BLAST of Lag0033679 vs. NCBI nr
Match: TXG47194.1 (hypothetical protein EZV62_026488 [Acer yangbiense])

HSP 1 Score: 108.6 bits (270), Expect = 7.6e-20
Identity = 67/200 (33.50%), Postives = 104/200 (52.00%), Query Frame = 0

Query: 39  WIENYLAEF----LSMQDRGQTNRVVPRAQRVVSGLRWECPPLGCVKLNVDASCSSKFHK 98
           W  ++L EF      +Q R  ++R VP         +W  PP G  K+N DA+ + + + 
Sbjct: 53  WAGDFLQEFRKSSAPVQPRLVSDRPVP---------KWLAPPQGMFKINTDAALNVQGNS 112

Query: 99  TGIGIVLRTASGRLHAAQTEVFSVVYSPPVAEALAILVGLRLVRTLGLARVEVESDCLHL 158
            GIG+V+R   G++  +  + F   +SP +AEALA+L GLRL +  G     +ESD L +
Sbjct: 113 AGIGVVIRNFRGQVMLSSCKNFRTAFSPVIAEALAVLEGLRLAKLGGFFPTVLESDALTV 172

Query: 159 ISMLNGSGISYHEDGTLVEEILVLASLFKQVVFRHVLRERNHPAHCLASHACA-MGSFLW 218
           +  +  +     + G ++++IL     F    FRHV R  N  AH LA  A + +G F+W
Sbjct: 173 VQDICRNESLSSDVGLVIDDILFFCRDFNFFSFRHVPRLANKVAHGLAKLALSNLGEFVW 232

Query: 219 SSNFPQWVTKLVLQDFPSAL 234
           S + P  V  LV+ DFP  +
Sbjct: 233 SGDCPLCVENLVMGDFPQTM 243

BLAST of Lag0033679 vs. NCBI nr
Match: SPT16885.1 (unnamed protein product [Triticum aestivum])

HSP 1 Score: 108.2 bits (269), Expect = 9.9e-20
Identity = 66/214 (30.84%), Postives = 99/214 (46.26%), Query Frame = 0

Query: 15  WAMWNDRNAARGGRMIPDIPIKRSWIENYLAEFLSMQDRGQTNRVVPRAQRVVSGLRWEC 74
           W +W +RNA R G  +   P++         EF++M     T  +  R + + S   W  
Sbjct: 125 WHIWENRNAYRNGEALIH-PLRMVGKIKAYVEFINMHSFSSTTSI--RRETLKSNQSWSP 184

Query: 75  PPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFSVVYSPPVAEALAILVGL 134
           P  G + +NVDA+  S+  + G G+V+R   GR+  A    F  V  P VAEA+A+   L
Sbjct: 185 PSEGLMLVNVDAAIFSQSARAGFGVVIRDHRGRVQVANRGYFERVQIPEVAEAMALQQAL 244

Query: 135 RLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILVLASLFKQVVFRHVLRER 194
            L    G+ ++ V SDCL LI+ + G G      G +V +I   A+ F      HV R  
Sbjct: 245 ILANNTGMRKIMVASDCLSLINKIKGLGFDRSPTGAIVHDIRKCATKFVSCSLIHVNRSC 304

Query: 195 NHPAHCLASHACAMGSFLWSSNFPQWVTKLVLQD 229
           N  AH LA  A       W + FP  +  ++  +
Sbjct: 305 NEAAHVLAKSAENDVWSWWINEFPDVIRTIICNE 335

BLAST of Lag0033679 vs. NCBI nr
Match: XP_042942894.1 (uncharacterized protein LOC122277073 [Carya illinoinensis])

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-19
Identity = 70/205 (34.15%), Postives = 104/205 (50.73%), Query Frame = 0

Query: 3   SDHDFGLWCVGCWAMWNDRNAAR--GGRMIPDIPIKRSWIENYLAEFLSMQDRGQTNRVV 62
           ++ D  L+ V CW MW  RN  +  G R+ P+     +     ++   S  +    N  V
Sbjct: 138 TEADLALFFVLCWGMWYRRNKHKMEGERVTPNAAANMA-----MSLHKSFTELKNLNATV 197

Query: 63  PRAQRVVSGLRWECPPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFSVVY 122
            R        RW+ PP   +KLNVD +   ++ K GIG++LR ++G +  A T   + V 
Sbjct: 198 AR-----KSYRWKHPPPEFLKLNVDGATFIEYRKVGIGLILRDSTGTVVMAATISETEVN 257

Query: 123 SPPVAEALAILVGLRLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILVLAS 182
            P   E LAIL G+++   LG+ ++ VESDCL L++ L  S      +  LV E+  L S
Sbjct: 258 DPSTIELLAILRGMQMCIPLGIPKLMVESDCLMLVNELQSSQAPSSVNSNLVMEVKNLMS 317

Query: 183 LFKQVVFRHVLRERNHPAHCLASHA 206
            F +V+F HV R  N  AH LA +A
Sbjct: 318 CFHEVLFEHVNRTCNGVAHVLARYA 332

BLAST of Lag0033679 vs. ExPASy TrEMBL
Match: A0A5C7GQX3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.7e-20
Identity = 67/200 (33.50%), Postives = 104/200 (52.00%), Query Frame = 0

Query: 39  WIENYLAEF----LSMQDRGQTNRVVPRAQRVVSGLRWECPPLGCVKLNVDASCSSKFHK 98
           W  ++L EF      +Q R  ++R VP         +W  PP G  K+N DA+ + + + 
Sbjct: 53  WAGDFLQEFRKSSAPVQPRLVSDRPVP---------KWLAPPQGMFKINTDAALNVQGNS 112

Query: 99  TGIGIVLRTASGRLHAAQTEVFSVVYSPPVAEALAILVGLRLVRTLGLARVEVESDCLHL 158
            GIG+V+R   G++  +  + F   +SP +AEALA+L GLRL +  G     +ESD L +
Sbjct: 113 AGIGVVIRNFRGQVMLSSCKNFRTAFSPVIAEALAVLEGLRLAKLGGFFPTVLESDALTV 172

Query: 159 ISMLNGSGISYHEDGTLVEEILVLASLFKQVVFRHVLRERNHPAHCLASHACA-MGSFLW 218
           +  +  +     + G ++++IL     F    FRHV R  N  AH LA  A + +G F+W
Sbjct: 173 VQDICRNESLSSDVGLVIDDILFFCRDFNFFSFRHVPRLANKVAHGLAKLALSNLGEFVW 232

Query: 219 SSNFPQWVTKLVLQDFPSAL 234
           S + P  V  LV+ DFP  +
Sbjct: 233 SGDCPLCVENLVMGDFPQTM 243

BLAST of Lag0033679 vs. ExPASy TrEMBL
Match: A0A7H4LE47 (Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS1485 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20
Identity = 66/214 (30.84%), Postives = 99/214 (46.26%), Query Frame = 0

Query: 15  WAMWNDRNAARGGRMIPDIPIKRSWIENYLAEFLSMQDRGQTNRVVPRAQRVVSGLRWEC 74
           W +W +RNA R G  +   P++         EF++M     T  +  R + + S   W  
Sbjct: 125 WHIWENRNAYRNGEALIH-PLRMVGKIKAYVEFINMHSFSSTTSI--RRETLKSNQSWSP 184

Query: 75  PPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFSVVYSPPVAEALAILVGL 134
           P  G + +NVDA+  S+  + G G+V+R   GR+  A    F  V  P VAEA+A+   L
Sbjct: 185 PSEGLMLVNVDAAIFSQSARAGFGVVIRDHRGRVQVANRGYFERVQIPEVAEAMALQQAL 244

Query: 135 RLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILVLASLFKQVVFRHVLRER 194
            L    G+ ++ V SDCL LI+ + G G      G +V +I   A+ F      HV R  
Sbjct: 245 ILANNTGMRKIMVASDCLSLINKIKGLGFDRSPTGAIVHDIRKCATKFVSCSLIHVNRSC 304

Query: 195 NHPAHCLASHACAMGSFLWSSNFPQWVTKLVLQD 229
           N  AH LA  A       W + FP  +  ++  +
Sbjct: 305 NEAAHVLAKSAENDVWSWWINEFPDVIRTIICNE 335

BLAST of Lag0033679 vs. ExPASy TrEMBL
Match: A0A803NGI9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20
Identity = 64/215 (29.77%), Postives = 107/215 (49.77%), Query Frame = 0

Query: 15   WAMWNDRNAARGGRMIPDIPIKRSWIENYLAEFLSMQDRGQTNRVVPRAQRVVSGLRWEC 74
            W +WNDRN    G+  P +   + W ++ +A F + Q +  +++ +  +    +   W  
Sbjct: 912  WFLWNDRNNFIHGK--PGLSPTQLWAKS-VAYFCNFQQQSTSSKSIRDSTGAAAQPHWIS 971

Query: 75   PPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFSVVYSPPVAEALAILVGL 134
            PPL  +K+NVDA+C    +K G+GI++R +SG++ AA ++  +    P   EA A+L+G+
Sbjct: 972  PPLDKLKMNVDAACDISRNKIGVGIIIRNSSGQVVAAYSKPLTGRLKPQEMEAKALLIGI 1031

Query: 135  RLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILVLASLFKQVVFRHVLRER 194
                   L+    ESD L L++ +N    +    G LV +I    S    V   HV R+ 
Sbjct: 1032 NWAARCNLSINLFESDSLILVNSINSISNAISSFGDLVLDIKNRLSYLSSVCVSHVKRDA 1091

Query: 195  NHPAHCLASHACAM-GSFLWSSNFPQWVTKLVLQD 229
            N  AH LA HA  +    +W    P  +  +V+ D
Sbjct: 1092 NQAAHGLAKHALELDDDCMWFEEIPSTIFSVVVND 1123

BLAST of Lag0033679 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.3e-20
Identity = 75/236 (31.78%), Postives = 102/236 (43.22%), Query Frame = 0

Query: 2    LSDHDFGLWCVGCWAMWNDRNAARGGRMIPDIPIKRSWIENYLAEFLSMQDRGQTNRVVP 61
            L   D  L  +  W +WNDRN+   G+ +  +  K  W    L  FL    + Q +   P
Sbjct: 1226 LEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEW----LTPFLDSHSQAQMSNYSP 1285

Query: 62   RAQR----VVSGLRWECPPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFS 121
            R Q     VV    W       +KLN DA+C      T  G ++R +S  L AA +    
Sbjct: 1286 RTQSNHRPVVQ--YWRPSSSVSLKLNTDAACRGA--STSFGCIIRDSSCSLVAATSIRVP 1345

Query: 122  VVYSPPVAEALAILVGLRLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILV 181
               SP +AE   IL GL+         +EVESD L  I ++     +  ++   V EI  
Sbjct: 1346 FPLSPLLAEIRCILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQA 1405

Query: 182  LASLFKQVVFRHVLRERNHPAHCLASHACAMGS--FLWSSNFPQWVTKLVLQDFPS 232
            L   F  + F H  R+ N  AH LA       S  + W  NFP W+  LV +DFPS
Sbjct: 1406 LTCCFAFISFSHSSRQCNRAAHGLAKWGITSPSATYAWLFNFPTWLLDLVQRDFPS 1453

BLAST of Lag0033679 vs. ExPASy TrEMBL
Match: A0A5N5GJP1 (RNase H domain-containing protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_022343 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 70/217 (32.26%), Postives = 110/217 (50.69%), Query Frame = 0

Query: 15  WAMWNDRNAARGGRMIPDIPIKRSWIENYLAEFLSMQDRGQTNRVVPRAQRVVSGL--RW 74
           WA+W  +NA   G +    PI         A+FL +            +Q V  G+  RW
Sbjct: 4   WAIWMVKNAKLLGEVPNPDPI---------ADFLRV--------TCSLSQPVSHGVSPRW 63

Query: 75  ECPPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFSVVYSPPVAEALAILV 134
            CPP+G +KLNVD +   +    G+GI++R A G    A T VF  ++SP   EALA+ V
Sbjct: 64  LCPPIGRLKLNVDWAWDKEHCIRGVGIIIRNAEGNFVGAATRVFMEMFSPIQVEALAMRV 123

Query: 135 GLRLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILVLASLFKQVVFRHVLR 194
           GL LV   GL ++ +ESD LH++  +  S ++    G ++E+   L +L  +    H+  
Sbjct: 124 GLELVVERGLIKINIESDALHIVLAVLKSSMNSSPMGPIIEDTKFLLALVVEASVAHIHP 183

Query: 195 ERNHPAHCLASHAC-AMGSFLWSSNFPQWVTKLVLQD 229
           + N  AH LA  A  + G++ W +  P  ++ L++ D
Sbjct: 184 QANLVAHHLARFALHSRGNYTWFNEPPLIISDLLVGD 203

BLAST of Lag0033679 vs. TAIR 10
Match: AT2G04420.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.4e-08
Identity = 42/168 (25.00%), Postives = 75/168 (44.64%), Query Frame = 0

Query: 71  RWECPPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFSVVYSPPVAEALAI 130
           +WE PP+G +K N D S + +  +T  G ++R   G    A   V   + +   +E  A+
Sbjct: 62  KWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKGFYKGAAQAVGGTMNNALESELQAL 121

Query: 131 LVGLRLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILVLASLFKQVVFRHV 190
           ++ ++   + G  +V  E D   +  +LN   + +      + E    +  F++V+F   
Sbjct: 122 VMAMQHTWSQGYRKVIFEGDSKQVEELLNRKQMHFGA-FNWIREAWSWSKRFEEVIFSWT 181

Query: 191 LRERNHPAHCLA-SHACAMGSFLWSSNFPQWVTKLVLQDFPSALCSHY 238
            R  N PA  LA SH     SF++    P ++T        +  C+HY
Sbjct: 182 PRTNNQPADMLAKSHLPQDTSFIYHYFVPNFITN-------ALHCNHY 221

BLAST of Lag0033679 vs. TAIR 10
Match: AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 6.2e-04
Identity = 35/128 (27.34%), Postives = 57/128 (44.53%), Query Frame = 0

Query: 75  PPLGCVKLNVDASCSSKFHKTGIGIVLRTASGRLHAAQTEVFSVVYSPPVAEALAILVGL 134
           P L  V +  DA+   +    G G V+R                V  P +AEA+A+ + L
Sbjct: 26  PDLDRVTIFTDAAWKHETKDVGFGWVIRNCPELTALHYQSAARNVRLPLMAEAIALFLAL 85

Query: 135 RLVRTLGLARVEVESDCLHLISMLNGSGISYHEDGTLVEEILVLASLFKQVVFRHVLRER 194
           +  +++G+ ++ + SD   LI+ +     S    G ++ +IL L+  F  V F  V R  
Sbjct: 86  QYAQSIGITKLSMASDSQQLITAITSESPSTEFYG-IIFDILNLSLGFADVSFSFVPRSE 145

Query: 195 NHPAHCLA 203
           N  A  LA
Sbjct: 146 NRVADELA 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_042974894.19.0e-2129.96uncharacterized protein LOC122306534 [Carya illinoinensis][more]
XP_023903785.15.8e-2030.40uncharacterized protein LOC112015598 [Quercus suber][more]
TXG47194.17.6e-2033.50hypothetical protein EZV62_026488 [Acer yangbiense][more]
SPT16885.19.9e-2030.84unnamed protein product [Triticum aestivum][more]
XP_042942894.11.3e-1934.15uncharacterized protein LOC122277073 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7GQX33.7e-2033.50RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 ... [more]
A0A7H4LE474.8e-2030.84Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCU... [more]
A0A803NGI94.8e-2029.77Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1DX306.3e-2031.78uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5N5GJP11.1e-1932.26RNase H domain-containing protein OS=Pyrus ussuriensis x Pyrus communis OX=24484... [more]
Match NameE-valueIdentityDescription
AT2G04420.15.4e-0825.00Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT4G09490.16.2e-0427.34Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 78..207
e-value: 1.4E-16
score: 62.7
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 83..205
e-value: 2.3E-24
score: 85.6
NoneNo IPR availablePANTHERPTHR47723OS05G0353850 PROTEINcoord: 60..228
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 82..202
e-value: 3.23595E-26
score: 96.6144
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 78..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0033679.1Lag0033679.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity