Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATCAGCGGTGCGGCACAGTACGAGCGTGTATTGAGTTACTTCGACGAGGATGGCGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGCTTGGGTTGATAGGCGGAGAGTTGCTGCAGGCGGAGGCCGAGGCGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGCGATTTCGAACGGCTACTGAACGTCGGCGAGGAAGAGAAATTGAAGGATTTGAAAGAGGCGTTTGCTTTGTACGATGCTGAAGGCTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTTAGAAAATTGGGGGAATCGAAATCCACGGAGGAGTGTAAATTGATGATTCGTCGGTTCGATTTGAACGGTGATGGATTGATCAGCTTCGAGGAGTTTCAGATCATGATGGCTTGA
mRNA sequence
ATGGAGATCAGCGGTGCGGCACAGTACGAGCGTGTATTGAGTTACTTCGACGAGGATGGCGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGCTTGGGTTGATAGGCGGAGAGTTGCTGCAGGCGGAGGCCGAGGCGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGCGATTTCGAACGGCTACTGAACGTCGGCGAGGAAGAGAAATTGAAGGATTTGAAAGAGGCGTTTGCTTTGTACGATGCTGAAGGCTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTTAGAAAATTGGGGGAATCGAAATCCACGGAGGAGTGTAAATTGATGATTCGTCGGTTCGATTTGAACGGTGATGGATTGATCAGCTTCGAGGAGTTTCAGATCATGATGGCTTGA
Coding sequence (CDS)
ATGGAGATCAGCGGTGCGGCACAGTACGAGCGTGTATTGAGTTACTTCGACGAGGATGGCGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGCTTGGGTTGATAGGCGGAGAGTTGCTGCAGGCGGAGGCCGAGGCGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGCGATTTCGAACGGCTACTGAACGTCGGCGAGGAAGAGAAATTGAAGGATTTGAAAGAGGCGTTTGCTTTGTACGATGCTGAAGGCTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTTAGAAAATTGGGGGAATCGAAATCCACGGAGGAGTGTAAATTGATGATTCGTCGGTTCGATTTGAACGGTGATGGATTGATCAGCTTCGAGGAGTTTCAGATCATGATGGCTTGA
Protein sequence
MEISGAAQYERVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGLLCVGDFERLLNVGEEEKLKDLKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECKLMIRRFDLNGDGLISFEEFQIMMA
Homology
BLAST of Lag0033623 vs. NCBI nr
Match:
XP_038879778.1 (putative calcium-binding protein CML19 [Benincasa hispida])
HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 131/141 (92.91%), Postives = 136/141 (96.45%), Query Frame = 0
Query: 1 MEISGAAQYERVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGLL 60
MEI+ AAQY+RVLSYFDEDGDGKISPSELRNRLGL+GGELLQAEAEAAVESLDSDGDGLL
Sbjct: 32 MEINCAAQYDRVLSYFDEDGDGKISPSELRNRLGLMGGELLQAEAEAAVESLDSDGDGLL 91
Query: 61 CVGDFERLLNVGEEEKLKDLKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECKLMI 120
C GDFERLL VGEEEKLKDLKEAFALYD EGCGFITPK+LK+MLRKLGE KSTEECKLMI
Sbjct: 92 CAGDFERLLEVGEEEKLKDLKEAFALYDCEGCGFITPKNLKKMLRKLGERKSTEECKLMI 151
Query: 121 RRFDLNGDGLISFEEFQIMMA 142
RRFDLNGDGLISFEEFQIMMA
Sbjct: 152 RRFDLNGDGLISFEEFQIMMA 172
BLAST of Lag0033623 vs. NCBI nr
Match:
XP_008464450.1 (PREDICTED: putative calcium-binding protein CML19 [Cucumis melo] >KAA0057778.1 putative calcium-binding protein CML19 [Cucumis melo var. makuwa] >TYJ98459.1 putative calcium-binding protein CML19 [Cucumis melo var. makuwa])
HSP 1 Score: 256.9 bits (655), Expect = 1.0e-64
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 0
Query: 1 MEIS-GAAQYERVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60
MEI+ AQY+RVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL
Sbjct: 1 MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60
Query: 61 LCVGDFERLLNVGEEEKLKDLKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECKLM 120
LC GD ERLL VGEEEKLKDLKEAFALYD+EGCGFITPK+LK+MLRKLGE KSTEECK+M
Sbjct: 61 LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120
Query: 121 IRRFDLNGDGLISFEEFQIMMA 142
IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142
BLAST of Lag0033623 vs. NCBI nr
Match:
XP_022925940.1 (putative calcium-binding protein CML19 [Cucurbita moschata])
HSP 1 Score: 256.5 bits (654), Expect = 1.3e-64
Identity = 127/141 (90.07%), Postives = 134/141 (95.04%), Query Frame = 0
Query: 1 MEISGAAQYERVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGLL 60
MEI+ AA Y+RVL YFDEDGDGKISPSELRNRLGLIGGELL AEAEAAVESLDSDGDGLL
Sbjct: 1 MEITSAAHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLL 60
Query: 61 CVGDFERLLNVGEEEKLKDLKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECKLMI 120
CVGD ERLL+VGEEEKLKDL+EAF LYDAEGCGFITPKSLKRML+KLGE+KST ECK+MI
Sbjct: 61 CVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMI 120
Query: 121 RRFDLNGDGLISFEEFQIMMA 142
RRFDLNGDGLISFEEFQIMMA
Sbjct: 121 RRFDLNGDGLISFEEFQIMMA 141
BLAST of Lag0033623 vs. NCBI nr
Match:
XP_004138054.1 (putative calcium-binding protein CML19 [Cucumis sativus])
HSP 1 Score: 256.1 bits (653), Expect = 1.7e-64
Identity = 126/139 (90.65%), Postives = 132/139 (94.96%), Query Frame = 0
Query: 3 ISGAAQYERVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGLLCV 62
+ AQY+RVLSYFDEDGDGKISPSELRNRLGLIGGEL QAEAEAAVESLDSDGDGLLCV
Sbjct: 4 VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 63
Query: 63 GDFERLLNVGEEEKLKDLKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECKLMIRR 122
GD ERLL VGEEEKLKDLKEAFALYD+EGCGFITPK+LK+MLRKLGE KSTEECK+MIRR
Sbjct: 64 GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 123
Query: 123 FDLNGDGLISFEEFQIMMA 142
FDLNGDGLISFEEFQIMMA
Sbjct: 124 FDLNGDGLISFEEFQIMMA 142
BLAST of Lag0033623 vs. NCBI nr
Match:
KAE8652382.1 (hypothetical protein Csa_014061 [Cucumis sativus])
HSP 1 Score: 256.1 bits (653), Expect = 1.7e-64
Identity = 126/139 (90.65%), Postives = 132/139 (94.96%), Query Frame = 0
Query: 3 ISGAAQYERVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGLLCV 62
+ AQY+RVLSYFDEDGDGKISPSELRNRLGLIGGEL QAEAEAAVESLDSDGDGLLCV
Sbjct: 54 VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 113
Query: 63 GDFERLLNVGEEEKLKDLKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECKLMIRR 122
GD ERLL VGEEEKLKDLKEAFALYD+EGCGFITPK+LK+MLRKLGE KSTEECK+MIRR
Sbjct: 114 GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 173
Query: 123 FDLNGDGLISFEEFQIMMA 142
FDLNGDGLISFEEFQIMMA
Sbjct: 174 FDLNGDGLISFEEFQIMMA 192
BLAST of Lag0033623 vs. ExPASy Swiss-Prot
Match:
Q8RYJ8 (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1)
HSP 1 Score: 135.2 bits (339), Expect = 5.8e-31
Identity = 76/143 (53.15%), Postives = 98/143 (68.53%), Query Frame = 0
Query: 3 ISGAAQYERVLSYFDEDGDGKISPSELRNRL-GLIGGELLQAEAEAAVESLDSDGDGLLC 62
++ A++ RV S FD D DGKIS +ELR + +G ++ EAEA V S D+D DGLL
Sbjct: 2 VAATAEFRRVFSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLLD 61
Query: 63 VGDFERL---LNVG-EEEKLKDLKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECK 122
+F +L L +G EEE+ + L EAF +Y+ EG G ITP SLKRML KLG + EEC+
Sbjct: 62 EEEFTKLAVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEECQ 121
Query: 123 LMIRRFDLNGDGLISFEEFQIMM 141
MI RFDL+GDG+ISFEEF+IMM
Sbjct: 122 TMICRFDLDGDGVISFEEFKIMM 144
BLAST of Lag0033623 vs. ExPASy Swiss-Prot
Match:
Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 7.6e-31
Identity = 70/134 (52.24%), Postives = 94/134 (70.15%), Query Frame = 0
Query: 8 QYERVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGLLCVGDFER 67
+ E V SY D + DG+ISP EL+ +G +L EA AAV D+DGDG+L +F +
Sbjct: 43 ELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQ 102
Query: 68 LLNV-GEEEKLKDLKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECKLMIRRFDLN 127
L+ V EEEK +LK AF LY AEG ITP+SLK ML+KLGES++T++C++MI FDLN
Sbjct: 103 LIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLN 162
Query: 128 GDGLISFEEFQIMM 141
DG++SF+EF +MM
Sbjct: 163 ADGVLSFDEFALMM 176
BLAST of Lag0033623 vs. ExPASy Swiss-Prot
Match:
Q8RYK0 (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 GN=CML31 PE=2 SV=1)
HSP 1 Score: 127.9 bits (320), Expect = 9.2e-29
Identity = 67/131 (51.15%), Postives = 91/131 (69.47%), Query Frame = 0
Query: 16 FDEDGDGKISPSELRNRL-GLIGGELLQAEAEAAVESLDSDGDGLLCVGDFERLLNVGEE 75
FD DGDG+IS +ELR + +G E+ EA V S+D+DGDGLLC +F RL+ E
Sbjct: 19 FDHDGDGRISAAELRLCMKTTLGEEVSDEEAGQLVASVDADGDGLLCEAEFVRLVQAAEV 78
Query: 76 EKLKD-----LKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECKLMIRRFDLNGDG 135
E+ + L+EAF +Y+ EG G ITP SL+RMLR+LG + ++C+ MI RFDLNGDG
Sbjct: 79 EEEDERRGTGLREAFGMYEMEGEGCITPTSLRRMLRRLGSDQDIDDCRAMICRFDLNGDG 138
Query: 136 LISFEEFQIMM 141
++SF+EF+IMM
Sbjct: 139 VLSFDEFKIMM 149
BLAST of Lag0033623 vs. ExPASy Swiss-Prot
Match:
Q9SRE7 (Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 65/135 (48.15%), Postives = 91/135 (67.41%), Query Frame = 0
Query: 10 ERVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGLLCVGDFERLL 69
E V +Y D + DG+IS EL+ +G ++ EAEAAV+ D DGDG+L + +F L+
Sbjct: 24 EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83
Query: 70 ----NVGEEEKLKDLKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECKLMIRRFDL 129
EEEK + + EAF +Y A+G ITP SLK ML KLGES++T++CK+MI+ FDL
Sbjct: 84 KGNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDL 143
Query: 130 NGDGLISFEEFQIMM 141
N DG++SF+EF +MM
Sbjct: 144 NADGVLSFDEFALMM 158
BLAST of Lag0033623 vs. ExPASy Swiss-Prot
Match:
Q9FIH9 (Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=1 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 7.3e-26
Identity = 62/132 (46.97%), Postives = 87/132 (65.91%), Query Frame = 0
Query: 12 VLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGLLCVGDFERLL-- 71
V Y D + DGKIS EL++ + L+GG L E E V++ D DGDG + +F +L+
Sbjct: 53 VFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEG 112
Query: 72 -NVGEEEKLKDLKEAFALYDAEGCGFITPKSLKRMLRKLGESKSTEECKLMIRRFDLNGD 131
+ +EE+ K+LKEAF +Y EG FIT SL+R L +LGES + + CK+MIR FD N D
Sbjct: 113 EDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDD 172
Query: 132 GLISFEEFQIMM 141
G++SF+EF +MM
Sbjct: 173 GVLSFDEFVLMM 184
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038879778.1 | 1.1e-66 | 92.91 | putative calcium-binding protein CML19 [Benincasa hispida] | [more] |
XP_008464450.1 | 1.0e-64 | 90.85 | PREDICTED: putative calcium-binding protein CML19 [Cucumis melo] >KAA0057778.1 p... | [more] |
XP_022925940.1 | 1.3e-64 | 90.07 | putative calcium-binding protein CML19 [Cucurbita moschata] | [more] |
XP_004138054.1 | 1.7e-64 | 90.65 | putative calcium-binding protein CML19 [Cucumis sativus] | [more] |
KAE8652382.1 | 1.7e-64 | 90.65 | hypothetical protein Csa_014061 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Q8RYJ8 | 5.8e-31 | 53.15 | Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Q9SRE6 | 7.6e-31 | 52.24 | Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1 | [more] |
Q8RYK0 | 9.2e-29 | 51.15 | Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Q9SRE7 | 2.7e-28 | 48.15 | Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1 | [more] |
Q9FIH9 | 7.3e-26 | 46.97 | Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=1 SV=1 | [more] |