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Lag0033607 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATGAAGATCAGAAAGAACTGCAGCTCCTTCCAACGGCTCAGAGCTCCCTAGCGTCGTCGTCGTCGTCGTTACGGTTCCGGTCGGAACCATTATTCGAGGCGGCGGGTGCAGGAGCAGGAGGAGGAGGTGGGTCGGTGGACCTGCAGCTATCGATAAGCCTGAGGCCAATGTTCAAGTACGAGGAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGGTGAAGTGGCAGGCGGCGGAGCAAATAAGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTTAGGGAGCTGACGAAGAGGGAAATAGAATTGGCGCAAACGGAATTCGCAAGGGCTCGACAGATGTGGGAAAGGGCAAGACAGGAACTCGAAAAGGCCGAGCGAATCAAACACCGAGCCACTCGCCAGTTGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGCCACAGGTTCCGCCCTTCTTGA ATGGAAGATGAAGATCAGAAAGAACTGCAGCTCCTTCCAACGGCTCAGAGCTCCCTAGCGTCGTCGTCGTCGTCGTTACGGTTCCGGTCGGAACCATTATTCGAGGCGGCGGGTGCAGGAGCAGGAGGAGGAGGTGGGTCGGTGGACCTGCAGCTATCGATAAGCCTGAGGCCAATGTTCAAGTACGAGGAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGGTGAAGTGGCAGGCGGCGGAGCAAATAAGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTTAGGGAGCTGACGAAGAGGGAAATAGAATTGGCGCAAACGGAATTCGCAAGGGCTCGACAGATGTGGGAAAGGGCAAGACAGGAACTCGAAAAGGCCGAGCGAATCAAACACCGAGCCACTCGCCAGTTGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGCCACAGGTTCCGCCCTTCTTGA ATGGAAGATGAAGATCAGAAAGAACTGCAGCTCCTTCCAACGGCTCAGAGCTCCCTAGCGTCGTCGTCGTCGTCGTTACGGTTCCGGTCGGAACCATTATTCGAGGCGGCGGGTGCAGGAGCAGGAGGAGGAGGTGGGTCGGTGGACCTGCAGCTATCGATAAGCCTGAGGCCAATGTTCAAGTACGAGGAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGGTGAAGTGGCAGGCGGCGGAGCAAATAAGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTTAGGGAGCTGACGAAGAGGGAAATAGAATTGGCGCAAACGGAATTCGCAAGGGCTCGACAGATGTGGGAAAGGGCAAGACAGGAACTCGAAAAGGCCGAGCGAATCAAACACCGAGCCACTCGCCAGTTGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGCCACAGGTTCCGCCCTTCTTGA MEDEDQKELQLLPTAQSSLASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS Homology
BLAST of Lag0033607 vs. NCBI nr
Match: XP_004138047.1 (protein indeterminate-domain 16 [Cucumis sativus]) HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58 Identity = 137/181 (75.69%), Postives = 146/181 (80.66%), Query Frame = 0
BLAST of Lag0033607 vs. NCBI nr
Match: XP_008464429.1 (PREDICTED: protein indeterminate-domain 16 [Cucumis melo] >TYJ98452.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]) HSP 1 Score: 232.3 bits (591), Expect = 3.0e-57 Identity = 137/178 (76.97%), Postives = 145/178 (81.46%), Query Frame = 0
BLAST of Lag0033607 vs. NCBI nr
Match: KAA0057771.1 (protein indeterminate-domain 16 [Cucumis melo var. makuwa]) HSP 1 Score: 230.7 bits (587), Expect = 8.7e-57 Identity = 136/178 (76.40%), Postives = 145/178 (81.46%), Query Frame = 0
BLAST of Lag0033607 vs. NCBI nr
Match: XP_038878928.1 (protein indeterminate-domain 16 [Benincasa hispida]) HSP 1 Score: 229.6 bits (584), Expect = 1.9e-56 Identity = 136/175 (77.71%), Postives = 144/175 (82.29%), Query Frame = 0
BLAST of Lag0033607 vs. NCBI nr
Match: KAE8652381.1 (hypothetical protein Csa_014379 [Cucumis sativus]) HSP 1 Score: 226.5 bits (576), Expect = 1.7e-55 Identity = 132/174 (75.86%), Postives = 141/174 (81.03%), Query Frame = 0
BLAST of Lag0033607 vs. ExPASy Swiss-Prot
Match: F4IPE3 (Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08 Identity = 45/152 (29.61%), Postives = 82/152 (53.95%), Query Frame = 0
BLAST of Lag0033607 vs. ExPASy Swiss-Prot
Match: Q9C9X7 (Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.9e-06 Identity = 27/63 (42.86%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Lag0033607 vs. ExPASy Swiss-Prot
Match: Q9FRH4 (Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06 Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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