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Lag0033593 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGTTCAAACCCTCGTGAGAGCAATGATCAAGATCAAGAAAACGAGTGTGCATGTGGTCCAAGAATTAACCCTGGCGATCAAATCGAGACGATTTCAGAAACAGAAAGTCCAACATTTGGTGTGATGAACTCGAACAATCCTCCCTTAATTTCCCCCCAAATTCAAATCCCTCCAGCGGAGATTCAGTCTCAAATGCAGGCTAATCTGGAGCCTCATTGGTGGTATCTTGATTCTGGTGCGACCGATCATGTGACGAAATATCTTGTGAATTTTTCAAGCTTCTTCCCTTGTAACGGTCGTCAAGTGGTTCGACTTGCTAATGGATCGTCTTTGCAGATCGAGCATACTGGTTCTTCTCGTTTGACATTCGGTAATCGTTGTTGCATTCTGAGAAAATTGTTGCATGTTCCTGATATGACCAAGAATTTTATCAGTGTCAGCCAATTTACCAAAGATAACGATGTCTTGTTTGAGTTTCACGCGTTGTCGTGTTATATAAAGGATCGCCAAAGCGGACAAATTATTAGCGTAGGAGAAATGTTTGGTGGACTGTACAGAATTCAAGTTAGATTGTCTTATATTCTGGCCTTTCCACCTTATTTCATTCATACTAATTTTTAGTCTTCTTAACAAAGTTTAGTTCTCCACTTTAATTTCGCTACTCGAACTCGCACGTGCGACAATTCGTGGCTGTGATTTCCAAATCCAATTTGATTCCATGCGAGGGTCTTGGACTTCTTTGGTAAATGGCATTCCCCTGGGCCTTTTTTGCTTTTGGGACGTGGCATTATTTCATTTTCGTATAATTTTATAATAATAATAATCTCAAACGTCACCACCACTGACTCATAAGCAAATTACCAGAAAATTGATTGAGTATGTACTACTACTAGAAATTATCTCGCAAATTACGATGTGCCACGTGGCTGAAAGTAATGCACGAACCACTCTATGGCGTCTACGTGTAAAGAGGTGGCAATTGAAGAGATCAATTGTCAATTATTTATTTAAAGTGAGAAACAGAACAATGGAGAATCTTATTTTTGTAAGGGGCCAAAATTAATTAGAAGATCTGACGGAGGGGTCCAAATTAAAGTATTCTGTGTGATAATTTATCGTTGCTTTCTTAATTGTGATTTAAAGGAAGTTGATTAAAGCAAGCAATTGACTTCAAAGCGCATTGGATTGGGTGTCGGAGTCAGAGAGCATTCAATACCTGCATTATTCAATTCAGGCTGAAATATTATTATTATTCTATTGAATTACGAATATTTAAAGGAAAATGAGGTTAAATATACGTATCTCAGTTTTTAAAACAATTATTACCACGATGGTTAAATCTTTCATAAAAAATAAAATAAAAAATAAATATATGTTTTCGTCTCTAGTTGAGTGGTTTTTAAAATTTAGTTATTATCTTTTAACCTAGTCTTTCGTTATTCATGAATATTTAATTTCTAACTATTTATAGACAAGAATGGAATAATTAAAAACATTATTCTCTTTGATGTTTTTTTGCTCCTTGAAATTTTCCCAATGAATCACGTTAGTTTATCGTGAGTTAATTTTGACATTCATCAATAGTAAAGAATAAATTGAAAAGTGACGCAAAGATTAGGGACTGCAACTTAGATTCCGAAAAAGAAAATATTACTAAAGATCTTCTTTACTTTTCTTTGTTGATACATTTGGAATTTTTATGTCTTGTTTGTCAGTTTTGTTTTAATTTTTTATTGTTGGAAAAATAAGACATGTTTCTTTTTATCTTGTAATCTTCGTTTGAATTTTTATTTTTAGAAATTAAGTTTAAGAAAATTACTTCCTTCAAGTGTTTGAATATGACTAAAGTTTTTGAAATCTTTTCACAAATGTAATTTTAAAAATGGTAAAGATTTATATTGTGTATATTACAAATTAGAATCATTTCATGATAGGGAAAGCAAGAAATTAAAGAAGGTGTTAGAGTGTCAAATCATGAAGTTTGGAACTTGATTTGCAAGTTTCATAATGTTGGGAATGGGTAGCTCAGCTGGAAGCTATGAGGCTATAAGTAGTCCATGAATTTGAAATGTGAGAGATTATTTGTGTTTGAAATTTGAGATGCCTAAAAAGAAAAAGTTGTCAGGTGACTTCAAATTTGAGATGATGTACTAAATGCTCAAATTTTGCTTTGGTTTCCACTACGAGATTATAATTCCAATCTCCTTACTATTCCAGGCGATGTCGACTCTTACACCTTATCCTTACACGCAACATATCTTACATGTGTATTTATACGAGGAGAAAAATACCAATGCTTTCAAATACGACATTAACAAACAAGAAGATTTAATTAGAAATATCGATGTCAATCCAAACATAGTTTAATAAAAAGGTGTATCAATTATCATCTCAAATGTCGATAGTTCAATCCTTACCTCTACAACTTTGAACTTAAAAAAAAAAAAATGAGAAATACCTAAATAAAAGAATTATGATTTGATTTATGGTGAAGTTGACAGTCAAATTAGATGCAATTTATTAGTTAAACCACAACTGCTCTCTCTCCAGGATCGTGGCTTGAAATTTCCATTCTCATATTTAGGTTGTTTTTTTTAAAAAAAAAACAAAAAACAAAAGAAAAGCTTATAGTTTGTTCACGAAGTGCTGTAAACTATTAGAGAATAATCCTCCATTAATATTGTCTTAATTTATGCCATTTATTGTGTTTGCCTTGCTGTAAATTTCTGTACAAGATCTTTCCTTTTTTATCTCCTTTCATTGTGTATAAAGATCATTCTCACAGTAATAAAATTATCGATAAATATTCTCTCATTCTCTGAGTCATTTTATGGTAATTAACTTTTTTTTTTTTAAAAAAAAAGGTCGTGTAATATTTGTTTTGAATTATGGATTTAATTTGAAAATAGTAAAAGTTAAGGGGAAAAAAAAGAACAAATTTTAAAATTCTATCACATCCTTTTTTTTATTAAACCTATTTCTAGAGAGCAACTTAGGTCTTGTGGAATTTCCAGACCACTCTTTCTGCCAATTTTAAAAATAAAAGTATAATGTGTTTTTTAGGAGGAAAAGGGACAAAGAAAAGAAGGACATTATCTAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTGGAGAAATATCTACTATCTAGCTATCTTCTAAATTCACCCACGCTTCAAAATGAAATTTCTTGGTCGGTTTTTGGAGAAAAAGATGAGGATGAGGAATTTTCTTTTTCTTTTCTTTTTTTTTTCCTTTTTCTTTTTGAGAGTTTCTAAGGTCATACTTAGGTGGATTTAGTTGGTGCATCTTCATCATGCCAAACAGATGTTAGTTGCAATTGTCCTCCTTCGTTCATCTTAAATAAATGCCAAATAATATACGCATTTCGAACCCTCAAAAATTAATTAATTTTTATTTTCCACTCCTTTATAGTTCAGCACCACAAGTTTTATTTCCCATCTTGTGGATAAGATAACATTATTTTAATATAAAAAAATATAAATGAAACTGTTGATTTCATTGGAATAATATCTAAAGATTAAGTTATAATTTTCGGTTGGTCAAATCTACTTTAATTTTGTTAAAAACCAACCTACAACAGCTACAATCATGTTAAAATTAAACCTTTCTTTTTTATCATCATTGTAGTTGAAACAATCATGTTAAAATTACTAATTTGACAAATGTTGTTTAGTAATTATAATATAACCAACTGAAATTTTCAAGTCAGGTTAGTTATAAAAAACTAAATCAAATGTAAAACTTTTAAAATTAGATAATAAATGGAGCCAACAACCCACTAAGATAAACATATTTATAATTACACCGCTAAGTGATGTTAAGTATGGTCTATGAATCCTCATTGTTGATGGTCAGATTTGGTTAGAGGAACTCACCTGACCTTCACGTGCTACCAACGGTAAAATTTGTAGAAGAGGGGGAAGACGTGGCCTGCAAGACAGAAAACCTGCACACCGGTGTGGTGTTCGCCACACTGACTCCGATGCTTAAGTCAGCAAGCAGAACGGTGGGGAGTGGAAAAGTAAGAGCAAGAGGAGAGAGTGTAGAGAATATAGAATGAGTTTCGGGATTAGAGTTCGGATCCCTTCTTCAGTGGTGAAGAGGGGTATAAATACCTGCTCATCCTCCTAGGGTTTTTAGGAATTCGGAGGCGTTTCGGGGCAAATCATGCGAAACCGGGGCGACCAGAGACGGTAGGGACAGAACGGAGTCGGGAGAACTCGACCCGCGCGAGCAGGACGAGGCTGACCATGGGCCTCGGCCTCGGCCTTAGGCCGAGGCCGAGCACGGGGTCGGGCCAAAAGCTCGACCCCTTTGGTCTTGGCTCGTCCTGCTTGTCGGTCTCGCCTTTGGAGTCCACCCCTCAGTCCTATTTCTGTCCATTGTCCTCGTCAGCTCCTTGTACATCGGAGTGGTCCAAAATCACCTATAACACTCATGAATCACCTTATGCTTAA ATGGATGGTTCAAACCCTCGTGAGAGCAATGATCAAGATCAAGAAAACGAGTGTGCATGTGGTCCAAGAATTAACCCTGGCGATCAAATCGAGACGATTTCAGAAACAGAAAGTCCAACATTTGGTGTGATGAACTCGAACAATCCTCCCTTAATTTCCCCCCAAATTCAAATCCCTCCAGCGGAGATTCAGTCTCAAATGCAGGCTAATCTGGAGCCTCATTGGTGGTATCTTGATTCTGGTGCGACCGATCATGTGACGAAATATCTTGTGAATTTTTCAAGCTTCTTCCCTTGTAACGGTCGTCAAGTGGTTCGACTTGCTAATGGATCGTCTTTGCAGATCGAGCATACTGGTTCTTCTCGTTTGACATTCGGTAATCGTTGTTGCATTCTGAGAAAATTGTTGCATGTTCCTGATATGACCAAGAATTTTATCAGTGTCAGCCAATTTACCAAAGATAACGATGTCTTGTTTGAGTTTCACGCGTTGTCGTGTTATATAAAGGATCGCCAAAGCGGACAAATTATTAGCGTAGGAGAAATGTTTGGTGGACTGTACAGAATTCAAAGGAACTCACCTGACCTTCACGTGCTACCAACGGTAAAATTTGTAGAAGAGGGGGAAGACGTGGCCTGCAAGACAGAAAACCTGCACACCGGTGTGGTGTTCGCCACACTGACTCCGATGCTTAAGTCAGCAAGCAGAACGGTGGGGAGTGGAAAAAGTTCGGATCCCTTCTTCAGTGGTGAAGAGGGGTATAAATACCTGCTCATCCTCCTAGGGTTTTTAGGAATTCGGAGGCGTTTCGGGGCAAATCATGCGAAACCGGGGCGACCAGAGACGGTAGGGACAGAACGGAGTCGGGAGAACTCGACCCGCGCGAGCAGGACGAGGCTGACCATGGGCCTCGGCCTCGGCCTTAGGCCGAGGCCGAGCACGGGGTCGGGCCAAAAGCTCGACCCCTTTGGTCTTGGCTCGTCCTGCTTGTCGGTCTCGCCTTTGGAGTCCACCCCTCAGTCCTATTTCTGTCCATTGTCCTCGTCAGCTCCTTGTACATCGGAGTGGTCCAAAATCACCTATAACACTCATGAATCACCTTATGCTTAA ATGGATGGTTCAAACCCTCGTGAGAGCAATGATCAAGATCAAGAAAACGAGTGTGCATGTGGTCCAAGAATTAACCCTGGCGATCAAATCGAGACGATTTCAGAAACAGAAAGTCCAACATTTGGTGTGATGAACTCGAACAATCCTCCCTTAATTTCCCCCCAAATTCAAATCCCTCCAGCGGAGATTCAGTCTCAAATGCAGGCTAATCTGGAGCCTCATTGGTGGTATCTTGATTCTGGTGCGACCGATCATGTGACGAAATATCTTGTGAATTTTTCAAGCTTCTTCCCTTGTAACGGTCGTCAAGTGGTTCGACTTGCTAATGGATCGTCTTTGCAGATCGAGCATACTGGTTCTTCTCGTTTGACATTCGGTAATCGTTGTTGCATTCTGAGAAAATTGTTGCATGTTCCTGATATGACCAAGAATTTTATCAGTGTCAGCCAATTTACCAAAGATAACGATGTCTTGTTTGAGTTTCACGCGTTGTCGTGTTATATAAAGGATCGCCAAAGCGGACAAATTATTAGCGTAGGAGAAATGTTTGGTGGACTGTACAGAATTCAAAGGAACTCACCTGACCTTCACGTGCTACCAACGGTAAAATTTGTAGAAGAGGGGGAAGACGTGGCCTGCAAGACAGAAAACCTGCACACCGGTGTGGTGTTCGCCACACTGACTCCGATGCTTAAGTCAGCAAGCAGAACGGTGGGGAGTGGAAAAAGTTCGGATCCCTTCTTCAGTGGTGAAGAGGGGTATAAATACCTGCTCATCCTCCTAGGGTTTTTAGGAATTCGGAGGCGTTTCGGGGCAAATCATGCGAAACCGGGGCGACCAGAGACGGTAGGGACAGAACGGAGTCGGGAGAACTCGACCCGCGCGAGCAGGACGAGGCTGACCATGGGCCTCGGCCTCGGCCTTAGGCCGAGGCCGAGCACGGGGTCGGGCCAAAAGCTCGACCCCTTTGGTCTTGGCTCGTCCTGCTTGTCGGTCTCGCCTTTGGAGTCCACCCCTCAGTCCTATTTCTGTCCATTGTCCTCGTCAGCTCCTTGTACATCGGAGTGGTCCAAAATCACCTATAACACTCATGAATCACCTTATGCTTAA MDGSNPRESNDQDQENECACGPRINPGDQIETISETESPTFGVMNSNNPPLISPQIQIPPAEIQSQMQANLEPHWWYLDSGATDHVTKYLVNFSSFFPCNGRQVVRLANGSSLQIEHTGSSRLTFGNRCCILRKLLHVPDMTKNFISVSQFTKDNDVLFEFHALSCYIKDRQSGQIISVGEMFGGLYRIQRNSPDLHVLPTVKFVEEGEDVACKTENLHTGVVFATLTPMLKSASRTVGSGKSSDPFFSGEEGYKYLLILLGFLGIRRRFGANHAKPGRPETVGTERSRENSTRASRTRLTMGLGLGLRPRPSTGSGQKLDPFGLGSSCLSVSPLESTPQSYFCPLSSSAPCTSEWSKITYNTHESPYA Homology
BLAST of Lag0033593 vs. NCBI nr
Match: KAG8483306.1 (hypothetical protein CXB51_022295 [Gossypium anomalum]) HSP 1 Score: 122.1 bits (305), Expect = 1.0e-23 Identity = 58/158 (36.71%), Postives = 89/158 (56.33%), Query Frame = 0
BLAST of Lag0033593 vs. NCBI nr
Match: KAG8501432.1 (hypothetical protein CXB51_003747 [Gossypium anomalum]) HSP 1 Score: 116.7 bits (291), Expect = 4.2e-22 Identity = 54/113 (47.79%), Postives = 72/113 (63.72%), Query Frame = 0
BLAST of Lag0033593 vs. NCBI nr
Match: KAG8503713.1 (hypothetical protein CXB51_001715 [Gossypium anomalum]) HSP 1 Score: 116.7 bits (291), Expect = 4.2e-22 Identity = 58/148 (39.19%), Postives = 88/148 (59.46%), Query Frame = 0
BLAST of Lag0033593 vs. NCBI nr
Match: KAG8491907.1 (hypothetical protein CXB51_015260 [Gossypium anomalum]) HSP 1 Score: 115.9 bits (289), Expect = 7.2e-22 Identity = 55/123 (44.72%), Postives = 77/123 (62.60%), Query Frame = 0
BLAST of Lag0033593 vs. NCBI nr
Match: OMO79651.1 (hypothetical protein CCACVL1_13538 [Corchorus capsularis]) HSP 1 Score: 115.5 bits (288), Expect = 9.5e-22 Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of Lag0033593 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 2.0e-14 Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of Lag0033593 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.3e-13 Identity = 53/144 (36.81%), Postives = 73/144 (50.69%), Query Frame = 0
BLAST of Lag0033593 vs. ExPASy TrEMBL
Match: A0A1U8IHB6 (uncharacterized protein LOC107894514 OS=Gossypium hirsutum OX=3635 GN=LOC107894514 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.7e-22 Identity = 54/113 (47.79%), Postives = 72/113 (63.72%), Query Frame = 0
BLAST of Lag0033593 vs. ExPASy TrEMBL
Match: A0A1R3IAV5 (Retrotran_gag_3 domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13538 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 4.6e-22 Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of Lag0033593 vs. ExPASy TrEMBL
Match: A0A6P4N3Y9 (uncharacterized protein LOC108462786 OS=Gossypium arboreum OX=29729 GN=LOC108462786 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.3e-21 Identity = 51/123 (41.46%), Postives = 74/123 (60.16%), Query Frame = 0
BLAST of Lag0033593 vs. ExPASy TrEMBL
Match: A0A314KNU6 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_12719 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.1e-21 Identity = 59/159 (37.11%), Postives = 83/159 (52.20%), Query Frame = 0
BLAST of Lag0033593 vs. ExPASy TrEMBL
Match: A0A1U8P8H3 (uncharacterized protein LOC107956322 OS=Gossypium hirsutum OX=3635 GN=LOC107956322 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-20 Identity = 54/137 (39.42%), Postives = 76/137 (55.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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