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Lag0033580 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGGAGGACGATTTGATTGACATTAAGTTCAGGCTGTACGATGGTTCTGATGTTGGACCATTTCGGTACTCCTCGTCATCGACGGTTGACGTGCTTAAGCAGAGAATAGTGTCTGATTGGCCCAAAGGTTGGAGCCTTACTCTTCATTCTTCTCCATTCTAGATACTCAATTAGCATCCTTTAACTGCAAATGCATATGTGAATTTACGGCTCTCTTTTCCCTGTTGTAGGTCTGTGAATCTTCTTTTTTTTTCCCGTTCTTTTACTTGTGTGTTTTGGACGTAGTTTGAATTTTTGATATGTATCGATTACTATTAGGAGCTGTTTAAATTTAACTCTTACGCACGTAGTTTGTAGTTTCTTAACAACCTTCATCCTCTAGATTTCTCCTGAACACTATAAATTGTTCAACATATTGATATTCTTTTTTCTTTTTTCCTTTTGGTTTATTTTTCTTTCCTTTTTAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCCGGTAAAATTTTGGAAAATAATAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAATTCACGGGAGGAGTTATTATAATGCATGTTGTTGTACAACCATCCCTAGCAAAAGCTAAAACAGGTGATTCCATTGTGATTTTAGTTACATATATAGTTTTCCTGTTCATACATTGTTCCTCTTTAAATTCTACTTTAGTATGGTTTCTTTTACCTTCTCTCCATTATTCTATAGTTTCTCAAATAGTTTGACAACTTGTATAGTTGTGGTCTTGGGAGTTGGAATTGCAATCTGA ATGCCGGAGGACGATTTGATTGACATTAAGTTCAGGCTGTACGATGGTTCTGATGTTGGACCATTTCGGTACTCCTCGTCATCGACGGTTGACGTGCTTAAGCAGAGAATAGTGTCTGATTGGCCCAAAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCCGGTAAAATTTTGGAAAATAATAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAATTCACGGGAGGAGTTATTATAATGCATGTTGTTGTACAACCATCCCTAGCAAAAGCTAAAACAGTTGTGGTCTTGGGAGTTGGAATTGCAATCTGA ATGCCGGAGGACGATTTGATTGACATTAAGTTCAGGCTGTACGATGGTTCTGATGTTGGACCATTTCGGTACTCCTCGTCATCGACGGTTGACGTGCTTAAGCAGAGAATAGTGTCTGATTGGCCCAAAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCCGGTAAAATTTTGGAAAATAATAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAATTCACGGGAGGAGTTATTATAATGCATGTTGTTGTACAACCATCCCTAGCAAAAGCTAAAACAGTTGTGGTCTTGGGAGTTGGAATTGCAATCTGA MPEDDLIDIKFRLYDGSDVGPFRYSSSSTVDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTVVVLGVGIAI Homology
BLAST of Lag0033580 vs. NCBI nr
Match: KAG7021382.1 (Membrane-anchored ubiquitin-fold protein 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 212.6 bits (540), Expect = 1.7e-51 Identity = 107/110 (97.27%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Lag0033580 vs. NCBI nr
Match: XP_022932445.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 201.8 bits (512), Expect = 3.0e-48 Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0
BLAST of Lag0033580 vs. NCBI nr
Match: XP_022932437.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita moschata] >XP_023531891.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >KAG6587398.1 Membrane-anchored ubiquitin-fold protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 201.8 bits (512), Expect = 3.0e-48 Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Lag0033580 vs. NCBI nr
Match: KAA0057753.1 (membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa] >TYJ98433.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Lag0033580 vs. NCBI nr
Match: XP_008464397.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464399.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464400.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464401.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_016903199.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_022932632.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022932642.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022974355.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_022974363.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_023531895.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_023531896.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_038879256.1 membrane-anchored ubiquitin-fold protein 3-like [Benincasa hispida] >KAG6587397.1 Membrane-anchored ubiquitin-fold protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Lag0033580 vs. ExPASy Swiss-Prot
Match: Q9SW27 (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 1.0e-43 Identity = 81/100 (81.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of Lag0033580 vs. ExPASy Swiss-Prot
Match: Q9LSD8 (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 4.8e-33 Identity = 65/99 (65.66%), Postives = 82/99 (82.83%), Query Frame = 0
BLAST of Lag0033580 vs. ExPASy Swiss-Prot
Match: Q7XRU4 (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2) HSP 1 Score: 125.2 bits (313), Expect = 4.7e-28 Identity = 57/97 (58.76%), Postives = 76/97 (78.35%), Query Frame = 0
BLAST of Lag0033580 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 9.1e-24 Identity = 47/87 (54.02%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of Lag0033580 vs. ExPASy Swiss-Prot
Match: Q8GWJ6 (Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana OX=3702 GN=MUB6 PE=1 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.3e-22 Identity = 48/96 (50.00%), Postives = 73/96 (76.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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