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Lag0033578 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGGAGGACGATTTGATTGACATTAAGTTTAGGCTCTACGATGGTTCTGATATTGGACCCTTTCAGTACTCATCGGCATCGACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCCAAAGGTTCGACCTTTGCTCTTCATCTTCTCCCTATTCTTTTCGATTATAACGTCTCAATTTGTAATCATTTCTGACATTTAGGTTTCTTTATGTCCTTTTACTGCAAACGCGTATGTGAACTTCCGGCGTTCCTATTGCATGTTCTAGAGTCTGTTAATCCTTCTTTTTTTTTAATACTATAGTCTGCTAGCTTAAGAAAGCTATTTTTAGGACTAATATTTTATTCTTGGCAGACGGCTCTAAGTCGATATTTTATTCTTGATTTACGCGCTCATTCAGAGGACGCATGTTCAATTTTTTTGATTTGTGTCGTTTACCATTAGGAATTTATGCCTGTGATGCCTGTCGTTCACTGGACTTCTTATCATTTCTCTCTGCATTTGTTTCATATTGATTTTCCTTTCCCCTTTTGGGACGATTTTTCTTTCCTTTTTAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGAAAAGTTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTCACTATAATGCACGTTGTTGTACAGCCATCCCTAGCAAAAGCAAAAACAGGTGATTTCCTTTGA ATGCCGGAGGACGATTTGATTGACATTAAGTTTAGGCTCTACGATGGTTCTGATATTGGACCCTTTCAGTACTCATCGGCATCGACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCCAAAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGAAAAGTTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTCACTATAATGCACGTTGTTGTACAGCCATCCCTAGCAAAAGCAAAAACAGGTGATTTCCTTTGA ATGCCGGAGGACGATTTGATTGACATTAAGTTTAGGCTCTACGATGGTTCTGATATTGGACCCTTTCAGTACTCATCGGCATCGACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCCAAAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGAAAAGTTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTCACTATAATGCACGTTGTTGTACAGCCATCCCTAGCAAAAGCAAAAACAGGTGATTTCCTTTGA MPEDDLIDIKFRLYDGSDIGPFQYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKVLENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTGDFL Homology
BLAST of Lag0033578 vs. NCBI nr
Match: KAA0057753.1 (membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa] >TYJ98433.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50 Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Lag0033578 vs. NCBI nr
Match: XP_008464397.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464399.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464400.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464401.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_016903199.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_022932632.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022932642.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022974355.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_022974363.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_023531895.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_023531896.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_038879256.1 membrane-anchored ubiquitin-fold protein 3-like [Benincasa hispida] >KAG6587397.1 Membrane-anchored ubiquitin-fold protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202.2 bits (513), Expect = 2.2e-48 Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Lag0033578 vs. NCBI nr
Match: XP_031745197.1 (membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745199.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745202.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >KGN63460.1 hypothetical protein Csa_013839 [Cucumis sativus]) HSP 1 Score: 201.8 bits (512), Expect = 2.8e-48 Identity = 97/100 (97.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Lag0033578 vs. NCBI nr
Match: XP_022134657.1 (membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134659.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134660.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia]) HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Lag0033578 vs. NCBI nr
Match: XP_022932445.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 198.7 bits (504), Expect = 2.4e-47 Identity = 94/100 (94.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Lag0033578 vs. ExPASy Swiss-Prot
Match: Q9SW27 (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 4.9e-43 Identity = 79/100 (79.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Lag0033578 vs. ExPASy Swiss-Prot
Match: Q9LSD8 (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.3e-32 Identity = 62/99 (62.63%), Postives = 80/99 (80.81%), Query Frame = 0
BLAST of Lag0033578 vs. ExPASy Swiss-Prot
Match: Q7XRU4 (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2) HSP 1 Score: 122.9 bits (307), Expect = 2.2e-27 Identity = 55/97 (56.70%), Postives = 75/97 (77.32%), Query Frame = 0
BLAST of Lag0033578 vs. ExPASy Swiss-Prot
Match: Q8LCS8 (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MUB2 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23 Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of Lag0033578 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 7.3e-23 Identity = 44/87 (50.57%), Postives = 69/87 (79.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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