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Lag0033573 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCTCGTCTCTTAACTCCCCGGAGCTCATGAATTTTATCAATGTGAGTTCATTTTCGTCTTTTTTAATTTTCACTTCTAGCCAACCATCAAAAAGAATGCAACTCTTGATGTCTAATTACTGATTTTTTTCCCCATGAATATGCTATTTGGTTGCTTTTTATTGTCCATATATTCATCTCCTGTTTTTTTTATAGAATGTCCGAGGATGGTGAAATTGATGCCACTCATGATTTCTGTGATTTCTAATTTATAGCGGATTGACAGTTCCGATATTTTTTTCACCAACTATTTAGTGCCAAATAGGACGTAAAACTTTTGCAAGAAACTATTACGTAGAAGCAATGAACAGAGTGCTTGAAACAGAGGTTTATATCGATCCAGTTTAAAGATAAGCCGTAACTTCTTGAAAGTAGCCTATTATATTTGCAGATTTGAGTTTGTTTCTAAATGTGAAATGAGTTAATGTTCTCTCCAACTTTCTGCATCCCGAGTTTAGGAGAAACATATTTTGATCAGATTTTATATCAAAGAATTTGAACTCTAGTTTGTAGAAACAACTTCCTAATTTCCTCCAAGATGAGCTTCAGGTTTAAATTTGGTCTGAAGACTTCAGAAATACCACTTGATGATTGTACTGCTCTGTGGAATATTAATATATACAAATCTGGAAACAATACATGCACGGAATTTTATTTTGTTTCCTCTTTTCTTGAAAACAGAAAGGAACTTTTTCCCGTTTAAAGATTTTCAATCTGGAAACAGTTATGGAGTTCCATTGTTCATATCACTTAAACGATCTGAGTTTGTCTGAATTTGAGGTTCCATTTATGATTCTTTAGAGTGTGATTTAAGCTATTGTAAGATGTTCAATTTGATTTGTTGTTCTTGACTAAAACTTTCATAATTGCGTGTCATTGAAATTTTGTTTTTATTGATTTAACCATGGGGGGCAATTAGTTGAATCCGAAATCTGTGCTGCCTGCCCTTCAACTGCACAACCTCCAGCGTTTTTCATTCCTGGATTTGATCCCCCCCCCCCCCCCCCCCCTCCCTCAAGAGTTTAGATAGCGTGATGCTTTGTTGTAATGTCACAAACTTTAATGCTATTGGTAAATTATTTGATCATTTTGTTGAACAGGAAGAGAAGCAAAGAGCCATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACAAGTGTATCACTGGTACGCCAGGGAGTAAGTTCAGCTCTAGTGAATCCAACTGTATATCAAACTGTGCCCAACGCTATATGGATATGAGTATCATCATCATGAAACGGTTCCAAAACAGTTAATGGATCTCAACGGGAGGCAGATTTTTCAGTTACAAGACAATGCATTTTCTTGGATCTATTGTTCAATTCAAACTGAAAGAAAAAGGGTCTGTACTTCTGAAAATATTGTTCATTTTTTTAAAGTTGATGCATTACCCAAATCAGATTATCTTACATCTTGATGAGAAAATTACTGAGTTGAAATGGGTTAGCCCATTGTAGTTTTTGTCGTATGTAGTGTTGAGTTTATGAATTGTAATGTGCTTACGATGTCAGCTTGCTGCTTCTTTGAAATTCCTAGAGGAAGGGCTCAATGTGGAGCACTGACTCTAAGTCTGGATGAAGCGGAAGGGTAG ATGGATTCCTCGTCTCTTAACTCCCCGGAGCTCATGAATTTTATCAATGAAGAGAAGCAAAGAGCCATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACAAGTGTATCACTGGTACGCCAGGGACTTGCTGCTTCTTTGAAATTCCTAGAGGAAGGGCTCAATGTGGAGCACTGACTCTAAGTCTGGATGAAGCGGAAGGGTAG ATGGATTCCTCGTCTCTTAACTCCCCGGAGCTCATGAATTTTATCAATGAAGAGAAGCAAAGAGCCATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACAAGTGTATCACTGGTACGCCAGGGACTTGCTGCTTCTTTGAAATTCCTAGAGGAAGGGCTCAATGTGGAGCACTGACTCTAAGTCTGGATGAAGCGGAAGGGTAG MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGTCCFFEIPRGRAQCGALTLSLDEAEG Homology
BLAST of Lag0033573 vs. NCBI nr
Match: KAG6587394.1 (Bidirectional sugar transporter SWEET12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24 Identity = 63/80 (78.75%), Postives = 65/80 (81.25%), Query Frame = 0
BLAST of Lag0033573 vs. NCBI nr
Match: KAA0057749.1 (bidirectional sugar transporter SWEET12-like [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 4.3e-16 Identity = 46/49 (93.88%), Postives = 47/49 (95.92%), Query Frame = 0
BLAST of Lag0033573 vs. NCBI nr
Match: XP_008464391.1 (PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Cucumis melo] >XP_011649996.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucumis sativus] >XP_022921432.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucurbita moschata] >XP_022924732.1 mitochondrial import inner membrane translocase subunit TIM8-like [Cucurbita moschata] >XP_022974369.1 mitochondrial import inner membrane translocase subunit TIM8-like [Cucurbita maxima] >XP_022988609.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucurbita maxima] >XP_023516926.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucurbita pepo subsp. pepo] >XP_023529319.1 mitochondrial import inner membrane translocase subunit TIM8-like [Cucurbita pepo subsp. pepo] >XP_038878330.1 mitochondrial import inner membrane translocase subunit TIM8 [Benincasa hispida] >KGN63456.1 hypothetical protein Csa_014027 [Cucumis sativus]) HSP 1 Score: 94.4 bits (233), Expect = 4.3e-16 Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0
BLAST of Lag0033573 vs. NCBI nr
Match: XP_022135207.1 (mitochondrial import inner membrane translocase subunit TIM8 [Momordica charantia]) HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15 Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 0
BLAST of Lag0033573 vs. NCBI nr
Match: KAG7023044.1 (Mitochondrial import inner membrane translocase subunit TIM8, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 91.3 bits (225), Expect = 3.7e-15 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 0
BLAST of Lag0033573 vs. ExPASy Swiss-Prot
Match: Q9XGY4 (Mitochondrial import inner membrane translocase subunit TIM8 OS=Arabidopsis thaliana OX=3702 GN=TIM8 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.0e-11 Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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